Spg027173 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg027173
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CCHC-type domain-containing protein
Location	scaffold8: 8908030 .. 8914879 (+)
RNA-Seq Expression	Spg027173
Synteny	Spg027173

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACACGCCGAAATCATCCTCATCTCGCAAGATCACTCGATCTCAGAGTGTTCAACGTGTCCAGAATACTGAACAAGGTGCTCGACACCAAGAAGAGCAGCCCGAACCTACCATGCACGACACGAGAAGAGCGAGACCCACGGGTTTCTCACCGGCGGCTGTAGACCAAGGAACCAACGTTGAAACTCCTTCTTCCTCGACAATGCCAGCCACTTTGAGGGAGAATCCGAGTAGTTCTCATCCAAGAAGGTCCACACGCACCGATTCCCTCCACAAAATCCAAAAACCTGCGGGCCAATTGTTGAGGAAACACTCGAGGGAATTGTTTGCGATGATTAGAGAGATGGGTGCCCAAAGGCGTGCAGCTCTTGAAGAAGAAGCCAGACTGCGTGATGCTGAAGAAGCTGCCAAAATCGGAGAAAGCTCTCGACAATGAGAGACTCCAACGAGTAAAATTCTAACCCTTCAACTAACCCGTCTTCTTCTTGCAGGGATAGGCCTTTTGTTACTTACAGTGCAAGAAAAAAAGAGTCAAAGAAGGCTTCACCTGAAAAGCCGCTTATTATCGAGCCCCTCAAAGTAGCTAGAATGTCGCTGGATGTGTTCGAAGAGATGATTCAACAGGCCGTTGCACAAGCCCTCATTACTGCCGAAGGTTACAGGGCTGAGCAAGATGCACTGAGGGAGATAATGGCTGAAAAAGAGAGGGAAAACCAGAGTATGGGGAAGAAGATGAGTTTGCAAGAAAAAGGGACTTGGAAGAAGAAAGGGAAGCCGAAAAAAGAAGAAAGAAGAAAAATAGCAGGCCGAGAGGGCCATACAAGCTGAAAAAGAAAGAAAACAAGATGAAGAACTCAAGAGAGTGGCTGCTGAACTTCACCTCCTTGAGCAAGAAAAAGAAAGAAGAGAAAACTTGAAAGAAGAAGAAGTAAGAAGAAAAGAGGCTGAAGATTTCCTTGTAGCCTTTGAGCCATTGCACAAGGCTCAAAGTGAGGTGGAACAGCTGCAAGAAATTGAAAAAGAGGCCCTTAAAGGGCCAAGTGAAGAAAAATCTGAAAAAGAAAAAGAAAAAGAGAATGAAGGCCAGAATGCGACCGCATTTGGGCCGCATTCTGAGGAAGGCCAGGAAAGGCCACTGAAGAAGGCCAAGCTGATGAGACCCTTGATCCTCTATTTGAGTATGATGTGAGAGGACCTCCACCAGCTGCTGATAGCACCTCTTCGGGAGAGAAGAAAGACGAAGAGGAAGTTGAAAAAGAGGAGGCTGAGACCTCCAGTGATTCAAAGACCGAATCAAATTCTAAAATCAAGGAATTGGATGATGACCAAATTCCTATCTCTGCAGCTTTTAGGAAGAAAAGAAGAAGAGAATTGAGAGCCGAGAGGAGGACGAAAAACAAAAATGACCCCATCTTTGCTAAGAGGTCGAGGACAAGATCCATGGACGCCTCTCCTGCAGTTCCTCTTACCATCTCTCCTGCCAAGCCAAAAGTCAAATTACCTAAAGCTCAATCACCAAAGAATCCGTTTCCTGAAGTCTTCAAGGATGTCAATTTCCAAGAGAAGATGGAGATTATGAGAAAAAGAGACTTCCTGAACGAAAAGGGATTCTCCAACAGAGTAGGGACCTTGCCAGATTTTGTTACTAAAGTCATTACCCAATACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGAGGTCGTGGTGCCTTTAGTTCGAGAATTCTATGATGGATTGAGGGAGGAGAGCATGAGCATGGCAGTGGTGAGAGGTAAGATGGTCAGTTTCTCTTCTGTCGACATCATTAGGGTGTACAGGATCAAAGCACCTTTGCATCCAAGAGGGAATGATGCCATCAAGAACCCCTCGGCCAAACAGATGAAAGAAGCATTGAAGATGGTGGCCAACAAAGGTGTTTAGTGGAAGGAGTCCCAAACAAAGGTAAAAACATTAGTGCCAAGTGATCTCAAGCCAGAATCGGCAGTGTGGCTTCACTTTATCAATAACAGGTTGATGCCAACAACCCACGATAGCACCATTTCAGTAGAGAGAGTTATGCTCCTCTACAACATCATGAAGGGGTTGTAGATAAATATTGGGAGCATCATCAGGGAGGAGATCCTTTCATGTGGGAGGAAGAGAGCAAGGAAACTGTTCTTTGGGTCACTTATCACCCAACTATGCCAGAGGGTAAAAATCGTTCCTGGGAAAGATGAGGAACGACACTTTTTCAAGCCGACCATTGATCTACCTCTAATCGGGAAGCTTCAACAGAATAATGCCCAAAGAAAGGACAAGGCTTCCATTTCCCAAGCTACTCCACCACCAGGGTTGACACTAGCTTCACCTCCTGAGCACACTCCTATTTCATGGTCTACACCATCATCAGAGGCCCTTGCATTCGTCTTCCGACAGCTAGACCGAATTGAAGACAAGCTGAAGGCTTACTGGGTCTATGCCAAGGAGAGAGATGAAGCTATTAGAGAGTTCTACCTCTCTATCGCCCCGAGCATCGCCCCCGTGTTCCCTAACTTCCCTCAATCGTTGCTGCCTCAAGAAGAGAAAGAATCTGATGAAGATGAAGAAGATGAAAGAGAGAGTTCCTCGGACAAGGAATATGGGAGTTTTTCTGATCCCCTTTATCCACTGTTTTTGTGCATGTTTTATTGTTTTCTGTGTATAGATATTTGCTGTTTTTTTTTTTAGTTTTAGCATGCTTAGTTTATGTTTTTAATTGTTGGCTTGCTATTTTTATTGTTTTAAATAATGTGTTTGTTGATAGTTATGATCATAGATTAGTTTTTCGGTAAGCTTGCTGATAGATTTGTTAGATAAACTTGGGTTTTTGAAACTTTTCTGAAAAATCTGCTTACTGTTTTTGTGCCTAACCTATGAGATTTTTTGAAAAAATCACCTTTGTGGAAAATAATTGTCTGAAAAATGTTTTGGAAAAACGTGTTTTCATTTGAGTTTTCTTTTAAGCCCTTGATGATGATAATTAGAGCTTAGTTCTATCTCATAAAGTGCCACCGTCACAACCGATTTGTTTTCTAGTCATAGGTTTTCCATTAGTCTTTTTCTTTACAGAATTTTCTTAAGTCTAAACTTCCTCATGTTTAACCTTTCTAACACACTAGGAGAGTTTAGCCTTGATGTTTTGAAAAACAAAAAGCCTCATGTTAGGCCTATGCCTCAAAAACAAAGTCAATGAGGACGATGTCTATCTTAAGTTTGGGGGGGGGGGGGTGCTTTACTTTACTTTGTATATATATATATTTTGTAAATTTGTACGGTTGGAAAAGAATTATATGCTCAGTATATATCATCCAAAAAAAAAATCGAGAGTTACTCCTCCTTCCTAGAGTTTACTGAGTAACCAGGGGCATTCATGACACCCATGGTTTGCCACTGCATGAAAGGTTTACTTAGGGAAATGAGTACTAATCCAAGCTTGTGAACTTTGCTCGTAGCTAGATATCTTCACCACAAAGTGTTGATAAGCTAGAACGAAGGTAAAAGTGACAACAAGGATACTCTTGGGAGAAAAAGAAGTTGAATAAAAAGAGCACCAGCAGTCAAATAAGTTTGGGGGAGATAGAAAAAACTCTAGTAACTCATGTATGCTCAAGGAACCTCAAGTCTTGTTTTTCTTAACTAAAAGGACTACACTAGGTTCAATGAGAAGTAGTTAGGTAGTTTAAACACATTGGTTAGGATGGACTAGGGAGAGTTTTGCTTTGAAAAAGAACAATAGAAATCTTCATGCCTCGGAAACTTAGAAGTTGTGACTGGCACTAGAGTAGAACCCTCTCCTGAAAGGCAAACTTTTTAGGAAACGATCTTGAGAAACATGTCTACTTGATTCCATATGATTTATTCATGACATTTTGATTTGCAATTAAAATTGATACTAGTACCATGATTGGCAATTACATATGATCCATAAAATTTTGGTTTGCAATTATTATTGAGCTCTCACATTTTGATTGGCAATTAAAAAGTTGATCTCTAACATTCTGATTTGCTATTTCTTGAGGACAAGTAATGAGTTATGTTTGGGGGTATGATAAAGGTAAAAAATATACCTATTTTACCCTTATATTTAGCTCATTTCCTTGTCAAAGTTGCATGCTTTAGATCAAATTTACCATTCCCGAGCTCTAAAAGTGTTAAAGTTGATAAATTAGGGAGTTAAGAGTCACTTATGTCAAAATATGCTTATTTGTACTTAAAAAGACTCAATTTGATATGAATTTGACTTAATTTGGTGCTGAGCAGAAAAACAGAGGAAGCTGGAAAAACCCTAAAATGCGACCGCATTTCTGGGAAGGCCAAATCCAAATGCGACCGCATTTCTGGGCAAACAGAGGCAGTTCCGAGTCTGCCGCGGGTTGTTTTGAAAGAGACTATTGCGCACCTAACCGGCCGTTTTGACCCTGAAATCGACTGGGCTACATACCAGCACCATTTTCGCAGCTCTTCAACTACTCCCCACACTATATAAGTGTAAACCCAAGACTTCTCTAGGATCATTTTCTCTTGTCATCTATTGTGGAAGTTGAACTAAAAGTTGTTGTTATTCATTGTCTAGGAAAAATGGCAAAGTTTTGTGGTTCTTTGTGGTTCATTGTTGGTTGAAGTTGTTGGGATTACTAAGTTAAAAGAAGGAAGGAAAGAAAAGAAAAGGAAAAGGAAAAGGAAAATGGAAGGAAAAGAAAAAAAAAGAAAATAAATCAGCAAAAAAAAAAAAAAAAAGAACAAAAGTGAAAAAAAAAAAAAAAAAAAGAAAGGAAATGGGAAAAGCCAGCAAAGAAACCCACCACCGCTTCACCCTTTTTCAGTCCATTTTCCCATCATTTCCCATCCAAAATTTTAGAGCACTTGAGGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCATAGCCAGCTACAGCAGAATCTGGGTTCAACCTGTCAACCTCTGGTTTTTGATTCGGTTTGAGCTACACAGAAGGAACTAAGAGGTGAGGTTTGATTTTCTTGAAAGTTAGCGCATTTTCTAACAAATTTTATGAAGGAAGCTTGAGCTAAATTGTATGAGAAGTTAATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGTAGGAGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATACTGGGGTGTACAAGTTGAATCCGAAGCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTTCCTACAACTCTCATGAAGAATCCGTGAGCCAAAAATGACTTGAAGTAGGTTTAATGTCAGGAGAAAGATAAAGGGTAGTAGAGAAGCTCAAATCTGTGTTGTCTGTGTTCGGGGCGTTTCTGGGAAAATTGGTTGGGAATCTTGTTTTCATTTCTTGAGGTAAGTTGTAGAGTATTCGAAAATGAAGAGTTTGATGTGTATTACATTAATTTTGGTTAAGTATTGAGGAAGTTATGGGTATTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAGTAGAATGTGAATGTGATTCTTAATTCAATTGTTTAGAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGGAACTAGCTAAGACAGTGAGTGACAAAATGAATTTCGAAAATTGTTTCCAACGGTTGTTCATGTTTAGACGTTTTATATGCTTTTCTATGAATGATACATGATTTCTATGAACAGTTTCAAGCATAAGTTTTGAGCTTAGATTTTCTAATGAGGTTTATATACGAGCACGTGGTTAATGACTTTATGACAAGTAGTTGAAACGATATCTTTTAAAGTAAAGTATGTATTAGCAAGTATTTTTTTTAAAGATTTTCAGTTTTTTCACGAGCAAGCTGAGTACACTTAAGTTTTACGAAAGATAACGATAAGCAGACACGTTCTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCAAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGACGCTGTCGTGAGTGCTGGGCGGGCTCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCGTACACAACGTAGATCGGTCATGTTAGTTAAAATGTTTGATGTACTTGATATGCCTTGCTAGATATTTAATAACGTACTTGCGAGTTTTTAAGAAAGCTTTTATCGTTACACGTTTATGTTAAACGCTTGATTGAACAGATTTATACGCTTAAAGGTTTATCACATGTTCCGATTTGCAAATCTACAGTTTTTAAAGCTACTCACTCACTGGGCTTCATAGCTCATTCTTTCAAAATGTTTTCCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCCGTCCATATTGTAAATGTTTTGTAAGGATTGGATAATCTAGTCCTAGAGGTCGTGGTTGTATAAACCCCAGTTGTATATGTTTTTGGTTCTGATATCTATATCAGGTTATTTTCCAAACCGAGTTATGTCAGGGCGGCACCTCGTGTATGTTGAAAGGTTTCCAGGGATTTCGCTGTGTTGTGTTTCACGTAGAATATCTTATATCTAAGATTAGTATGTTTATCAGGTTCAACGTTCTAGGAGGGTCAACG

mRNA sequence

ATGAAGAACACGCCGAAATCATCCTCATCTCGCAAGATCACTCGATCTCAGAGTGTTCAACGTGTCCAGAATACTGAACAAGGTGCTCGACACCAAGAAGAGCAGCCCGAACCTACCATGCACGACACGAGAAGAGCGAGACCCACGGGTTTCTCACCGGCGGCTGTAGACCAAGGAACCAACGTTGAAACTCCTTCTTCCTCGACAATGCCAGCCACTTTGAGGGAGAATCCGAGTAGTTCTCATCCAAGAAGGTCCACACGCACCGATTCCCTCCACAAAATCCAAAAACCTGCGGGCCAATTGTTGAGGAAACACTCGAGGGAATTGGATAGGCCTTTTGTTACTTACAGTGCAAGAAAAAAAGAGTCAAAGAAGGCTTCACCTGAAAAGCCGCTTATTATCGAGCCCCTCAAAGTAGCTAGAATGTCGCTGGATGTGTTCGAAGAGATGATTCAACAGGCCGTTGCACAAGCCCTCATTACTGCCGAAGGTTACAGGGCTGAGCAAGATGCACTGAGGGAGATAATGGCTGAAAAAGAGAGGGAAAACCAGACCTTTGAGCCATTGCACAAGGCTCAAAGTGAGGTGGAACAGCTGCAAGAAATTGAAAAAGAGGCCCTTAAAGGGCCAAGAAGGCCAGGAAAGGCCACTGAAGAAGGCCAAGCTGATGAGACCCTTGATCCTCTATTTGAGTATGATGTGAGAGGACCTCCACCAGCTGCTGATAGCACCTCTTCGGGAGAGAAGAAAGACGAAGAGGAAGTTGAAAAAGAGGAGGCTGAGACCTCCAGTGATTCAAAGACCGAATCAAATTCTAAAATCAAGGAATTGGATGATGACCAAATTCCTATCTCTGCAGCTTTTAGGAAGAAAAGAAGAAGAGAATTGAGAGCCGAGAGGAGGACGAAAAACAAAAATGACCCCATCTTTGCTAAGAGGTCGAGGACAAGATCCATGGACGCCTCTCCTGCAGTTCCTCTTACCATCTCTCCTGCCAAGCCAAAAGTCAAATTACCTAAAGCTCAATCACCAAAGAATCCGTTTCCTGAAGTCTTCAAGGATGTCAATTTCCAAGAGAAGATGGAGATTATGAGAAAAAGAGACTTCCTGAACGAAAAGGGATTCTCCAACAGAGTAGGGACCTTGCCAGATTTTGTTACTAAAGTCATTACCCAATACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGAGGTCGTGGTGCCTTTAGTTCGAGAATTCTATGATGGATTGAGGGAGGAGAGCATGAGCATGGCAGTGGTGAGAGGTAAGATGGTCAGTTTCTCTTCTGTCGACATCATTAGGGTGTACAGGATCAAAGCACCTTTGCATCCAAGAGGGAATGATGCCATCAAGAACCCCTCGGCCAAACAGATGAAAGAAGCATTGAAGATGGTGGCCAACAAAGGTATAAATATTGGGAGCATCATCAGGGAGGAGATCCTTTCATGTGGGAGGAAGAGAGCAAGGAAACTGTTCTTTGGGTCACTTATCACCCAACTATGCCAGAGGGTAAAAATCGTTCCTGGGAAAGATGAGGAACGACACTTTTTCAAGCCGACCATTGATCTACCTCTAATCGGGAAGCTTCAACAGAATAATGCCCAAAGAAAGGACAAGGCTTCCATTTCCCAAGCTACTCCACCACCAGGGTTGACACTAGCTTCACCTCCTGAGCACACTCCTATTTCATGGTCTACACCATCATCAGAGGCCCTTGCATTCGTCTTCCGACAGCTAGACCGAATTGAAGACAAGCTGAAGGCTTACTGGGTCTATGCCAAGGAGAGAGATGAAGCTATTAGAGAGTTCTACCTCTCTATCGCCCCGAGCATCGCCCCCGTGTTCCCTAACTTCCCTCAATCGTTGCTGCCTCAAGAAGAGAAAGAATCTGATGAAGATGAAGAAGATGAAAGAGAGAGTTCCTCGGACAAGGAATATGGGAGTTTTTCTGATCCCCTTTATCCACTGTTTTTAAAAACAGAGGAAGCTGGAAAAACCCTAAAATGCGACCGCATTTCTGGGAAGGCCAAATCCAAATGCGACCGCATTTCTGGGCAAACAGAGGCAGTTCCGAGTCTGCCGCGGGTTGTTTTGAAAGAGACTATTGCGCACCTAACCGGCCAGCACTTGAGGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCATAGCCAGCTACAGCAGAATCTGGGTTCAACCTGTCAACCTCTGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGGAACTAGCTAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCCGTCCATATTGTAAATGTTTTGTTCAACGTTCTAGGAGGGTCAACG

Coding sequence (CDS)

ATGAAGAACACGCCGAAATCATCCTCATCTCGCAAGATCACTCGATCTCAGAGTGTTCAACGTGTCCAGAATACTGAACAAGGTGCTCGACACCAAGAAGAGCAGCCCGAACCTACCATGCACGACACGAGAAGAGCGAGACCCACGGGTTTCTCACCGGCGGCTGTAGACCAAGGAACCAACGTTGAAACTCCTTCTTCCTCGACAATGCCAGCCACTTTGAGGGAGAATCCGAGTAGTTCTCATCCAAGAAGGTCCACACGCACCGATTCCCTCCACAAAATCCAAAAACCTGCGGGCCAATTGTTGAGGAAACACTCGAGGGAATTGGATAGGCCTTTTGTTACTTACAGTGCAAGAAAAAAAGAGTCAAAGAAGGCTTCACCTGAAAAGCCGCTTATTATCGAGCCCCTCAAAGTAGCTAGAATGTCGCTGGATGTGTTCGAAGAGATGATTCAACAGGCCGTTGCACAAGCCCTCATTACTGCCGAAGGTTACAGGGCTGAGCAAGATGCACTGAGGGAGATAATGGCTGAAAAAGAGAGGGAAAACCAGACCTTTGAGCCATTGCACAAGGCTCAAAGTGAGGTGGAACAGCTGCAAGAAATTGAAAAAGAGGCCCTTAAAGGGCCAAGAAGGCCAGGAAAGGCCACTGAAGAAGGCCAAGCTGATGAGACCCTTGATCCTCTATTTGAGTATGATGTGAGAGGACCTCCACCAGCTGCTGATAGCACCTCTTCGGGAGAGAAGAAAGACGAAGAGGAAGTTGAAAAAGAGGAGGCTGAGACCTCCAGTGATTCAAAGACCGAATCAAATTCTAAAATCAAGGAATTGGATGATGACCAAATTCCTATCTCTGCAGCTTTTAGGAAGAAAAGAAGAAGAGAATTGAGAGCCGAGAGGAGGACGAAAAACAAAAATGACCCCATCTTTGCTAAGAGGTCGAGGACAAGATCCATGGACGCCTCTCCTGCAGTTCCTCTTACCATCTCTCCTGCCAAGCCAAAAGTCAAATTACCTAAAGCTCAATCACCAAAGAATCCGTTTCCTGAAGTCTTCAAGGATGTCAATTTCCAAGAGAAGATGGAGATTATGAGAAAAAGAGACTTCCTGAACGAAAAGGGATTCTCCAACAGAGTAGGGACCTTGCCAGATTTTGTTACTAAAGTCATTACCCAATACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGAGGTCGTGGTGCCTTTAGTTCGAGAATTCTATGATGGATTGAGGGAGGAGAGCATGAGCATGGCAGTGGTGAGAGGTAAGATGGTCAGTTTCTCTTCTGTCGACATCATTAGGGTGTACAGGATCAAAGCACCTTTGCATCCAAGAGGGAATGATGCCATCAAGAACCCCTCGGCCAAACAGATGAAAGAAGCATTGAAGATGGTGGCCAACAAAGGTATAAATATTGGGAGCATCATCAGGGAGGAGATCCTTTCATGTGGGAGGAAGAGAGCAAGGAAACTGTTCTTTGGGTCACTTATCACCCAACTATGCCAGAGGGTAAAAATCGTTCCTGGGAAAGATGAGGAACGACACTTTTTCAAGCCGACCATTGATCTACCTCTAATCGGGAAGCTTCAACAGAATAATGCCCAAAGAAAGGACAAGGCTTCCATTTCCCAAGCTACTCCACCACCAGGGTTGACACTAGCTTCACCTCCTGAGCACACTCCTATTTCATGGTCTACACCATCATCAGAGGCCCTTGCATTCGTCTTCCGACAGCTAGACCGAATTGAAGACAAGCTGAAGGCTTACTGGGTCTATGCCAAGGAGAGAGATGAAGCTATTAGAGAGTTCTACCTCTCTATCGCCCCGAGCATCGCCCCCGTGTTCCCTAACTTCCCTCAATCGTTGCTGCCTCAAGAAGAGAAAGAATCTGATGAAGATGAAGAAGATGAAAGAGAGAGTTCCTCGGACAAGGAATATGGGAGTTTTTCTGATCCCCTTTATCCACTGTTTTTAAAAACAGAGGAAGCTGGAAAAACCCTAAAATGCGACCGCATTTCTGGGAAGGCCAAATCCAAATGCGACCGCATTTCTGGGCAAACAGAGGCAGTTCCGAGTCTGCCGCGGGTTGTTTTGAAAGAGACTATTGCGCACCTAACCGGCCAGCACTTGAGGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCATAGCCAGCTACAGCAGAATCTGGGTTCAACCTGTCAACCTCTGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGGAACTAGCTAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCCGTCCATATTGTAAATGTTTTGTTCAACGTTCTAGGAGGGTCAACG

Protein sequence

MKNTPKSSSSRKITRSQSVQRVQNTEQGARHQEEQPEPTMHDTRRARPTGFSPAAVDQGTNVETPSSSTMPATLRENPSSSHPRRSTRTDSLHKIQKPAGQLLRKHSRELDRPFVTYSARKKESKKASPEKPLIIEPLKVARMSLDVFEEMIQQAVAQALITAEGYRAEQDALREIMAEKERENQTFEPLHKAQSEVEQLQEIEKEALKGPRRPGKATEEGQADETLDPLFEYDVRGPPPAADSTSSGEKKDEEEVEKEEAETSSDSKTESNSKIKELDDDQIPISAAFRKKRRRELRAERRTKNKNDPIFAKRSRTRSMDASPAVPLTISPAKPKVKLPKAQSPKNPFPEVFKDVNFQEKMEIMRKRDFLNEKGFSNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLREESMSMAVVRGKMVSFSSVDIIRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGINIGSIIREEILSCGRKRARKLFFGSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQNNAQRKDKASISQATPPPGLTLASPPEHTPISWSTPSSEALAFVFRQLDRIEDKLKAYWVYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEEKESDEDEEDERESSSDKEYGSFSDPLYPLFLKTEEAGKTLKCDRISGKAKSKCDRISGQTEAVPSLPRVVLKETIAHLTGQHLRERVKEEEEEEFRGFEVEEDRKSSCIASYSRIWVQPVNLWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHIVNVLFNVLGGST

Homology

[Close]

BLAST of Spg027173 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 103.6 bits (257), Expect = 8.3e-18
Identity = 94/351 (26.78%), Postives = 147/351 (41.88%), Query Frame = 0


Query: 365 MRKRDFLNEKGF----SNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLRE 424
           ++ R    EKGF    S  +G LP F+ +VITQ+ W++FCAHP++ +VPLVREFY  L +
Sbjct: 38  IQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTD 97

Query: 425 ESMSMAVVRGKMVSFSSVDIIRVYRIKAPLHPRGNDAIKN-------------------- 484
              +   VRG  VS+S   I  V+ +  P+    ++ I+N                    
Sbjct: 98  PEENTVYVRGVQVSWSEEAINAVFGLGDPVDEH-SEFIQNITQQDLITVLETVAAAGAEW 157

Query: 485 ----------------PSAKQMKEALK----------------------MVANKGINIGS 544
                           P+AK     LK                      M+  K IN+G 
Sbjct: 158 NVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGR 217

Query: 545 IIREEILSCGRKRARKLFFGSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQN-- 604
           +I  EI +C  ++   LFF SLIT+LC+  +     +EE+      ID   + ++ Q   
Sbjct: 218 MIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGP 277

Query: 605 NAQRKDKASISQATPPPGLTLASPPEHTPISWSTPSSEALA--FVFRQLDRIEDKLKAYW 646
               +  +S   AT     T     +         S + +    +   L     + + +W
Sbjct: 278 TESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFW 337

[Close]

BLAST of Spg027173 vs. NCBI nr
Match: TYJ96965.1 (uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 3.3e-14
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 0


Query: 755 VNLWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI 810
           +N+WPRGNR S QT +L KTVEIELPVPDTLPTSAESS S+SSTW+ELY ESVH+
Sbjct: 133 MNIWPRGNRPSRQTGKLDKTVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHV 187

[Close]

BLAST of Spg027173 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 88.2 bits (217), Expect = 3.6e-13
Identity = 68/237 (28.69%), Postives = 103/237 (43.46%), Query Frame = 0


Query: 365 MRKRDFLNEKGF----SNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLRE 424
           ++ R    EKGF    S  +G LP F+ +VITQ+ W++FCAHP++ +VPLVREFY  L +
Sbjct: 29  IQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTD 88

Query: 425 ESMSMAVVRGKMVSFSSVDIIRVYRIKAPLHPRGNDAIKN-------------------- 484
              +   VRG  VS+S   I  V+ +  P+    ++ I+N                    
Sbjct: 89  PVENTVYVRGVQVSWSEEAINAVFGLGDPVDEH-SEFIENITEHDLITVLETVAVAGAEW 148

Query: 485 ----------------PSAKQMKEALK----------------------MVANKGINIGS 540
                           P+AK     LK                      M+  K IN+G 
Sbjct: 149 NVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGR 208

[Close]

BLAST of Spg027173 vs. NCBI nr
Match: KAA0066795.1 (uncharacterized protein E6C27_scaffold271G001440 [Cucumis melo var. makuwa] >TYK27942.1 uncharacterized protein E5676_scaffold384G001370 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 1.0e-12
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 757 LWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI 810
           +WPRGNR SLQTREL KT  IELPVPDTLPTSAESS S+SSTW+ELY ESVH+
Sbjct: 62  VWPRGNRPSLQTRELDKT--IELPVPDTLPTSAESSGSNSSTWLELYFESVHV 112

[Close]

BLAST of Spg027173 vs. NCBI nr
Match: KAA0052218.1 (uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK01785.1 uncharacterized protein E5676_scaffold113G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 1.8e-12
Identity = 47/82 (57.32%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 728 EEFRGFEVEEDRKSSCIASYSRIWVQPVNLWPRGNRSSLQTRELAKTVEIELPVPDTLPT 787
           EE RG       KS     +S      +++ PRGNR +L T +L KTVEIELPVPDTLPT
Sbjct: 52  EELRGESTRFLSKSGGFLVFS----DALSILPRGNRPNLHTGKLDKTVEIELPVPDTLPT 111

Query: 788 SAESSRSSSSTWVELYIESVHI 810
           SAESS+S+SSTW+ELY ESVH+
Sbjct: 112 SAESSKSNSSTWLELYFESVHV 129

[Close]

BLAST of Spg027173 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.0e-18
Identity = 94/351 (26.78%), Postives = 147/351 (41.88%), Query Frame = 0


Query: 365 MRKRDFLNEKGF----SNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLRE 424
           ++ R    EKGF    S  +G LP F+ +VITQ+ W++FCAHP++ +VPLVREFY  L +
Sbjct: 38  IQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTD 97

Query: 425 ESMSMAVVRGKMVSFSSVDIIRVYRIKAPLHPRGNDAIKN-------------------- 484
              +   VRG  VS+S   I  V+ +  P+    ++ I+N                    
Sbjct: 98  PEENTVYVRGVQVSWSEEAINAVFGLGDPVDEH-SEFIQNITQQDLITVLETVAAAGAEW 157

Query: 485 ----------------PSAKQMKEALK----------------------MVANKGINIGS 544
                           P+AK     LK                      M+  K IN+G 
Sbjct: 158 NVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGR 217

Query: 545 IIREEILSCGRKRARKLFFGSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQN-- 604
           +I  EI +C  ++   LFF SLIT+LC+  +     +EE+      ID   + ++ Q   
Sbjct: 218 MIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGP 277

Query: 605 NAQRKDKASISQATPPPGLTLASPPEHTPISWSTPSSEALA--FVFRQLDRIEDKLKAYW 646
               +  +S   AT     T     +         S + +    +   L     + + +W
Sbjct: 278 TESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFW 337

[Close]

BLAST of Spg027173 vs. ExPASy TrEMBL
Match: A0A5D3BET3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00070 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.6e-14
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 0


Query: 755 VNLWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI 810
           +N+WPRGNR S QT +L KTVEIELPVPDTLPTSAESS S+SSTW+ELY ESVH+
Sbjct: 133 MNIWPRGNRPSRQTGKLDKTVEIELPVPDTLPTSAESSGSNSSTWLELYFESVHV 187

[Close]

BLAST of Spg027173 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.7e-13
Identity = 68/237 (28.69%), Postives = 103/237 (43.46%), Query Frame = 0


Query: 365 MRKRDFLNEKGF----SNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLRE 424
           ++ R    EKGF    S  +G LP F+ +VITQ+ W++FCAHP++ +VPLVREFY  L +
Sbjct: 29  IQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTD 88

Query: 425 ESMSMAVVRGKMVSFSSVDIIRVYRIKAPLHPRGNDAIKN-------------------- 484
              +   VRG  VS+S   I  V+ +  P+    ++ I+N                    
Sbjct: 89  PVENTVYVRGVQVSWSEEAINAVFGLGDPVDEH-SEFIENITEHDLITVLETVAVAGAEW 148

Query: 485 ----------------PSAKQMKEALK----------------------MVANKGINIGS 540
                           P+AK     LK                      M+  K IN+G 
Sbjct: 149 NVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGR 208

[Close]

BLAST of Spg027173 vs. ExPASy TrEMBL
Match: A0A5D3DWP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001370 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.1e-13
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 757 LWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI 810
           +WPRGNR SLQTREL KT  IELPVPDTLPTSAESS S+SSTW+ELY ESVH+
Sbjct: 62  VWPRGNRPSLQTRELDKT--IELPVPDTLPTSAESSGSNSSTWLELYFESVHV 112

[Close]

BLAST of Spg027173 vs. ExPASy TrEMBL
Match: A0A5A7UAH6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00130 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.6e-13
Identity = 47/82 (57.32%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 728 EEFRGFEVEEDRKSSCIASYSRIWVQPVNLWPRGNRSSLQTRELAKTVEIELPVPDTLPT 787
           EE RG       KS     +S      +++ PRGNR +L T +L KTVEIELPVPDTLPT
Sbjct: 52  EELRGESTRFLSKSGGFLVFS----DALSILPRGNRPNLHTGKLDKTVEIELPVPDTLPT 111

Query: 788 SAESSRSSSSTWVELYIESVHI 810
           SAESS+S+SSTW+ELY ESVH+
Sbjct: 112 SAESSKSNSSTWLELYFESVHV 129

The following BLAST results are available for this feature:

BLAST of Spg027173 vs. NCBI nr


Match Name	E-value	Identity	Description
PON46472.1	8.3e-18	26.78	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
TYJ96965.1	3.3e-14	78.18	uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]	[more]
PON35554.1	3.6e-13	28.69	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
KAA0066795.1	1.0e-12	81.13	uncharacterized protein E6C27_scaffold271G001440 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0052218.1	1.8e-12	57.32	uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK0...	[more]

BLAST of Spg027173 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg027173 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5BCG4	4.0e-18	26.78	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A5D3BET3	1.6e-14	78.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2P5AGA5	1.7e-13	28.69	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A5D3DWP3	5.1e-13	81.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UAH6	8.6e-13	57.32	CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Spg027173 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 163..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 542..572
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 632..658
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 542..557

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg027173.1	Spg027173.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0016740	transferase activity