Spg027148 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg027148
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	UPF0235 protein LHK_03181
Location	scaffold8: 4756797 .. 4758086 (-)
RNA-Seq Expression	Spg027148
Synteny	Spg027148

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGCGTTTGAGATATGGGTGGGTCAAAACTGTATCACCGCTCGCAAAACCCCGTTTGATTTGGGGGAAAATATTCAAAAGAAAATGGCTCCGGCGAAGAAGGGGAAAACGAAAGCTCCGAAAGCTACTGAATCAATTCAATCCTCACTCAAATCCAACAGTTACCCTTCTTGTCTTCGCTCTGTTTCTCCTTCTTCCGTCGCCATCACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGGTCTTTCTCTCTCTTTCCCTCTAAATCTCTTCCGTTTATGACTTAGAGTCGTAAGTTTCTGGAAATCCTTGCAGATTTTGGCGATGATGCGTTGGGAGTGCAAATCGACGCGCCGCCCAAAGATGGAGAAGCTAATGCTGCCCTTCTTGATTACATGAGCTCTGTAAGTTGGCCATTCTTTGCTGCTGATTATTTGAATTCGAAATATTTTTTTCTTTTAATTCGTTGTACTTCAATTTTCATTGCCAATTTAACCAATTTGCCTAAAACTGAAATCGATTATACTCCTTATTTGGGATTTTTGGTGGATATTCGAAAAATTGGAATTGTTTTGGGCTAATTGGTGTATCAAACGGAGTATATTGATGTTATTAGTTTGTTGAAAATCCGGTGCTTGATCACCTATTTGTATTTGAGGACTGTTATTCCCGTTGCATGTAGGAGTTGATGTCTTCTGTCTACTTACACTGTAGCATAAAACTTCAACACATGTTGATAGTAGCGCCAGATTAGAAAAGTTGAACGAATGTCAAATATAACTTTCAGTTTCCCCGCATTCTCTACAAGCTTCCTACTTCATTTCTCCATTCTAATTACCGTTTAATTGAAGTGAATCGTGTTTATAAACCACTTGTTTGTATTTCAATGGAAGCTTTTCGTTCTCCTTGTTAAAGGACATGCGTTTTTCTTTACAACTACTGGCAGCCCCCAGATACCTAATTTGTTTTAAGGATCAAATCCTAAATAACCCCTAAATTAGAGCTCTCAGGTTTAGTCTCTTCATGTTGCCTAGAAGCTCTTTTCTCTGCTTTTTCTCCCTCCTCATGAAGCTTAATACTCCAAATGATTGCATGAAGTATATGAGTGCTGCTTCCATAACTCTCTCATATTTATAATTTATCTCACAGGTCTTGGGTGTCAAAAAAAGACAAGTATCAATAGGTTCTGGCTCTAAATCAAGAGACAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGACGCTTTGAATAAAGCTTTAACATGTGAGTGA

mRNA sequence

TTGGCGTTTGAGATATGGGTGGGTCAAAACTGTATCACCGCTCGCAAAACCCCGTTTGATTTGGGGGAAAATATTCAAAAGAAAATGGCTCCGGCGAAGAAGGGGAAAACGAAAGCTCCGAAAGCTACTGAATCAATTCAATCCTCACTCAAATCCAACAGTTACCCTTCTTGTCTTCGCTCTGTTTCTCCTTCTTCCGTCGCCATCACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGATTTTGGCGATGATGCGTTGGGAGTGCAAATCGACGCGCCGCCCAAAGATGGAGAAGCTAATGCTGCCCTTCTTGATTACATGAGCTCTGTCTTGGGTGTCAAAAAAAGACAAGTATCAATAGGTTCTGGCTCTAAATCAAGAGACAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGACGCTTTGAATAAAGCTTTAACATGTGAGTGA

Coding sequence (CDS)

TTGGCGTTTGAGATATGGGTGGGTCAAAACTGTATCACCGCTCGCAAAACCCCGTTTGATTTGGGGGAAAATATTCAAAAGAAAATGGCTCCGGCGAAGAAGGGGAAAACGAAAGCTCCGAAAGCTACTGAATCAATTCAATCCTCACTCAAATCCAACAGTTACCCTTCTTGTCTTCGCTCTGTTTCTCCTTCTTCCGTCGCCATCACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGATTTTGGCGATGATGCGTTGGGAGTGCAAATCGACGCGCCGCCCAAAGATGGAGAAGCTAATGCTGCCCTTCTTGATTACATGAGCTCTGTCTTGGGTGTCAAAAAAAGACAAGTATCAATAGGTTCTGGCTCTAAATCAAGAGACAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGACGCTTTGAATAAAGCTTTAACATGTGAGTGA

Protein sequence

LAFEIWVGQNCITARKTPFDLGENIQKKMAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGSKSRDKVVIVEEVSLQSVFDALNKALTCE

Homology

[Close]

BLAST of Spg027148 vs. NCBI nr
Match: XP_004151587.1 (uncharacterized protein LOC101218498 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 3.3e-61
Identity = 132/148 (89.19%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 9   QNCITARKTPFDLGENIQKKMAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSSVA 68
           QN ++ RK PFDLG    KKM PAKKGKTKAPKATESIQSS+KSN+YPSCLRSVSPSSVA
Sbjct: 13  QNYVSTRKIPFDLG----KKMPPAKKGKTKAPKATESIQSSVKSNNYPSCLRSVSPSSVA 72

Query: 69  ITIHAKPGSKIASITDFGDDALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGS 128
           ITIHAKPGSKIASITDFGDDALGVQIDAP KDGEANAALLDYMSSVLGVK+RQVSIGSGS
Sbjct: 73  ITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGS 132

Query: 129 KSRDKVVIVEEVSLQSVFDALNKALTCE 157
           KSR KVVIVE+VSLQSVFDALNKALTCE
Sbjct: 133 KSRGKVVIVEDVSLQSVFDALNKALTCE 156

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BLAST of Spg027148 vs. NCBI nr
Match: XP_008460904.1 (PREDICTED: UPF0235 protein LHK_03181 [Cucumis melo])

HSP 1 Score: 242.7 bits (618), Expect = 2.2e-60
Identity = 132/148 (89.19%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 9   QNCITARKTPFDLGENIQKKMAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSSVA 68
           QN  +ARK PFDLG    KKM PAKKGKTKAPKATESIQSS+K+N+YPSCLRSVSPSSVA
Sbjct: 13  QNYASARKIPFDLG----KKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVA 72

Query: 69  ITIHAKPGSKIASITDFGDDALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGS 128
           ITIHAKPGSKIASITDF DDALGVQIDAP KDGEANAALLDYMSSVLGVK+RQVSIGSGS
Sbjct: 73  ITIHAKPGSKIASITDFDDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGS 132

Query: 129 KSRDKVVIVEEVSLQSVFDALNKALTCE 157
           KSR KVVIVEEVSLQSVFDALNKALTCE
Sbjct: 133 KSRGKVVIVEEVSLQSVFDALNKALTCE 156

[Close]

BLAST of Spg027148 vs. NCBI nr
Match: XP_038902101.1 (UPF0235 protein C15orf40 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 225.7 bits (574), Expect = 2.7e-55
Identity = 120/128 (93.75%), Postives = 125/128 (97.66%), Query Frame = 0


Query: 29  MAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           M PAKKGKTKA KATESIQSS+K+N+YPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD
Sbjct: 1   MPPAKKGKTKAAKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 60

Query: 89  ALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGSKSRDKVVIVEEVSLQSVFDA 148
           ALGVQIDAP KDGEANAALLDYMSSVLGVK+RQ+SIGSGSKSRDKVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120

Query: 149 LNKALTCE 157
           LNKALTCE
Sbjct: 121 LNKALTCE 128

[Close]

BLAST of Spg027148 vs. NCBI nr
Match: XP_022971730.1 (UPF0235 protein C15orf40 homolog [Cucurbita maxima])

HSP 1 Score: 222.6 bits (566), Expect = 2.3e-54
Identity = 119/126 (94.44%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 29  MAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           MAPAKKGKTKAPKATESIQSSLK N+YPSCLRSVS SS+AITIHAKPGSKIASITDFGDD
Sbjct: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60

Query: 89  ALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGSKSRDKVVIVEEVSLQSVFDA 148
           ALGVQIDAP KDGEANAALLDYMSSVLGVK+RQ+SIGSGSKSRDKVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120

Query: 149 LNKALT 155
           LNKALT
Sbjct: 121 LNKALT 126

[Close]

BLAST of Spg027148 vs. NCBI nr
Match: XP_023512400.1 (UPF0235 protein C15orf40 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217.2 bits (552), Expect = 9.8e-53
Identity = 116/126 (92.06%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 29  MAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           MAPAKKGKTKAPK TESI+S LK+N+YPSCLRSVS SSVAITIHAKPGSKIASITDFGDD
Sbjct: 1   MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDD 60

Query: 89  ALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGSKSRDKVVIVEEVSLQSVFDA 148
           ALGVQIDAP KDGEANAALLDYMSSVLGVK+RQ+SIG GSKSRDKVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGCGSKSRDKVVIVEEVSLQSVFDA 120

Query: 149 LNKALT 155
           LNKALT
Sbjct: 121 LNKALT 126

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BLAST of Spg027148 vs. ExPASy Swiss-Prot
Match: Q505I4 (UPF0235 protein C15orf40 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.6e-12
Identity = 47/111 (42.34%), Postives = 61/111 (54.95%), Query Frame = 0


Query: 27  KKMAPAKKGK--TKAPKATESIQSSLKSNSYPSCLRSVSPSSVAITIHAKPGSKIASITD 86
           KK     KGK  TK P+        + ++         S   V I IHAKPGSK  ++TD
Sbjct: 3   KKAGATSKGKNQTKEPETPPPPTGPVATD---------SKGFVTIAIHAKPGSKQNAVTD 62

Query: 87  FGDDALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGSKSRDKVV 136
              +A+GV I APP +GEANA L  Y+S VL ++K  V +  G KSR+KVV
Sbjct: 63  LNTEAVGVAIAAPPSEGEANAELCRYLSKVLDLRKSDVVLDKGGKSREKVV 104

[Close]

BLAST of Spg027148 vs. ExPASy Swiss-Prot
Match: Q9CRC3 (UPF0235 protein C15orf40 homolog OS=Mus musculus OX=10090 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-11
Identity = 45/111 (40.54%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 27  KKMAPAKKGK--TKAPKATESIQSSLKSNSYPSCLRSVSPSSVAITIHAKPGSKIASITD 86
           KK     KGK  TK P+        + ++             V I IHAKPGS+  ++TD
Sbjct: 3   KKAGATSKGKNQTKEPETAPPAAGPVATD---------PKGFVTIAIHAKPGSRQNAVTD 62

Query: 87  FGDDALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGSKSRDKVV 136
              +A+GV I APP +GEANA L  Y+S VL ++K  V +  G KSR+KVV
Sbjct: 63  LSTEAVGVAIAAPPSEGEANAELCRYLSKVLDLRKSDVVLDKGGKSREKVV 104

[Close]

BLAST of Spg027148 vs. ExPASy Swiss-Prot
Match: Q8WUR7 (UPF0235 protein C15orf40 OS=Homo sapiens OX=9606 GN=C15orf40 PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 7.4e-11
Identity = 47/127 (37.01%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 27  KKMAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSS-VAITIHAKPGSKIASITDF 86
           KK     KGK+++ +    +         P    +V P   V I IHAKPGSK  ++TD 
Sbjct: 30  KKAGATTKGKSQSKEPERPLP--------PLGPVAVDPKGCVTIAIHAKPGSKQNAVTDL 89

Query: 87  GDDALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGSKSRDKVV-IVEEVSLQS 146
             +A+ V I APP +GEANA L  Y+S VL ++K  V +  G KSR+KVV ++   + + 
Sbjct: 90  TAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDKGGKSREKVVKLLASTTPEE 148

Query: 147 VFDALNK 152
           + + L K
Sbjct: 150 ILEKLKK 148

[Close]

BLAST of Spg027148 vs. ExPASy Swiss-Prot
Match: Q3ZBP8 (UPF0235 protein C15orf40 homolog OS=Bos taurus OX=9913 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 47/127 (37.01%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 27  KKMAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSP-SSVAITIHAKPGSKIASITDF 86
           KK     KGK ++ +    +         P    +V P   V+I IHAKPGSK  ++TD 
Sbjct: 3   KKCGATNKGKNQSKEPERPLP--------PLGPVTVDPKGGVSIAIHAKPGSKQNAVTDV 62

Query: 87  GDDALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGSKSRDKVV-IVEEVSLQS 146
             +A+ V I APP +GEANA L  Y+S VL ++K  V +  G KSR+KVV ++     + 
Sbjct: 63  TTEAVSVAIAAPPTEGEANAELCRYLSKVLELRKSDVVLDKGGKSREKVVKLLASTPPEE 121

Query: 147 VFDALNK 152
           + + L K
Sbjct: 123 ILEKLKK 121

[Close]

BLAST of Spg027148 vs. ExPASy Swiss-Prot
Match: Q54UW1 (UPF0235 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0280783 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-09
Identity = 37/125 (29.60%), Postives = 66/125 (52.80%), Query Frame = 0


Query: 33  KKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGV 92
           KKG + + K  +  Q  + +N+       V    + I ++  P SK +SI  F D  L +
Sbjct: 3   KKGSSNSSKQQQQQQQIIINNN-----AKVDEPIIKINVNVHPNSKESSIVSFEDQILSL 62

Query: 93  QIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGSKSRDKVVIV----EEVSLQSVFDA 152
           +I  PP DG+AN  +++++S  L ++K  + +G GSKSR+K V +    E ++   +F+ 
Sbjct: 63  RISEPPIDGKANIGVIEFLSKELNIRKSNIEVGKGSKSRNKSVEIDISSENITKDELFER 122

Query: 153 LNKAL 154
           +   L
Sbjct: 123 IKSKL 122

[Close]

BLAST of Spg027148 vs. ExPASy TrEMBL
Match: A0A0A0LMY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G301550 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.6e-61
Identity = 132/148 (89.19%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 9   QNCITARKTPFDLGENIQKKMAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSSVA 68
           QN ++ RK PFDLG    KKM PAKKGKTKAPKATESIQSS+KSN+YPSCLRSVSPSSVA
Sbjct: 13  QNYVSTRKIPFDLG----KKMPPAKKGKTKAPKATESIQSSVKSNNYPSCLRSVSPSSVA 72

Query: 69  ITIHAKPGSKIASITDFGDDALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGS 128
           ITIHAKPGSKIASITDFGDDALGVQIDAP KDGEANAALLDYMSSVLGVK+RQVSIGSGS
Sbjct: 73  ITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGS 132

Query: 129 KSRDKVVIVEEVSLQSVFDALNKALTCE 157
           KSR KVVIVE+VSLQSVFDALNKALTCE
Sbjct: 133 KSRGKVVIVEDVSLQSVFDALNKALTCE 156

[Close]

BLAST of Spg027148 vs. ExPASy TrEMBL
Match: A0A1S3CDI8 (UPF0235 protein LHK_03181 OS=Cucumis melo OX=3656 GN=LOC103499646 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 132/148 (89.19%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 9   QNCITARKTPFDLGENIQKKMAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSSVA 68
           QN  +ARK PFDLG    KKM PAKKGKTKAPKATESIQSS+K+N+YPSCLRSVSPSSVA
Sbjct: 13  QNYASARKIPFDLG----KKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVA 72

Query: 69  ITIHAKPGSKIASITDFGDDALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGS 128
           ITIHAKPGSKIASITDF DDALGVQIDAP KDGEANAALLDYMSSVLGVK+RQVSIGSGS
Sbjct: 73  ITIHAKPGSKIASITDFDDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGS 132

Query: 129 KSRDKVVIVEEVSLQSVFDALNKALTCE 157
           KSR KVVIVEEVSLQSVFDALNKALTCE
Sbjct: 133 KSRGKVVIVEEVSLQSVFDALNKALTCE 156

[Close]

BLAST of Spg027148 vs. ExPASy TrEMBL
Match: A0A6J1I6J5 (UPF0235 protein C15orf40 homolog OS=Cucurbita maxima OX=3661 GN=LOC111470398 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.1e-54
Identity = 119/126 (94.44%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 29  MAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           MAPAKKGKTKAPKATESIQSSLK N+YPSCLRSVS SS+AITIHAKPGSKIASITDFGDD
Sbjct: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60

Query: 89  ALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGSKSRDKVVIVEEVSLQSVFDA 148
           ALGVQIDAP KDGEANAALLDYMSSVLGVK+RQ+SIGSGSKSRDKVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120

Query: 149 LNKALT 155
           LNKALT
Sbjct: 121 LNKALT 126

[Close]

BLAST of Spg027148 vs. ExPASy TrEMBL
Match: A0A6J1EMK4 (uncharacterized protein LOC111434889 OS=Cucurbita moschata OX=3662 GN=LOC111434889 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.0e-52
Identity = 115/126 (91.27%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 29  MAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           MAPAKKGKTKA K TES +S LK+N+YPSCLRSVS SSVAITIHAKPGSKIASITDFGDD
Sbjct: 1   MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDD 60

Query: 89  ALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGSKSRDKVVIVEEVSLQSVFDA 148
           ALGVQIDAP KDGEANAALLDYMSSVLGVK+RQ+SIGSGSKSRDKVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120

Query: 149 LNKALT 155
           LNKALT
Sbjct: 121 LNKALT 126

[Close]

BLAST of Spg027148 vs. ExPASy TrEMBL
Match: A0A6J1CR98 (uncharacterized protein LOC111013451 OS=Momordica charantia OX=3673 GN=LOC111013451 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.2e-52
Identity = 115/128 (89.84%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 29  MAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           M PAKKGKTKAPKATESIQ    SN +PSCLRSV+PSSVAITIHAKPGSKIASITDFGDD
Sbjct: 1   MPPAKKGKTKAPKATESIQ----SNKFPSCLRSVAPSSVAITIHAKPGSKIASITDFGDD 60

Query: 89  ALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGSKSRDKVVIVEEVSLQSVFDA 148
           ALGVQIDAP KDGEANAALLDY+S+VLGVK+RQVSIGSGSKSRDKVVIVEEVSLQ+VFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYISTVLGVKRRQVSIGSGSKSRDKVVIVEEVSLQTVFDA 120

Query: 149 LNKALTCE 157
           LNKALTCE
Sbjct: 121 LNKALTCE 124

[Close]

BLAST of Spg027148 vs. TAIR 10
Match: AT1G49170.1 (Protein of unknown function (DUF167) )

HSP 1 Score: 160.6 bits (405), Expect = 1.0e-39
Identity = 89/124 (71.77%), Postives = 107/124 (86.29%), Query Frame = 0


Query: 29  MAPAKKGKTKAPKATESIQSSLKSNSYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88
           MAP KKGK K   A ES  +  +S+S+P+CLR ++PSSVAITIHAKPGSK ASITD  D+
Sbjct: 1   MAPTKKGK-KTKSAAES-TTVTESSSFPTCLRLLTPSSVAITIHAKPGSKAASITDVSDE 60

Query: 89  ALGVQIDAPPKDGEANAALLDYMSSVLGVKKRQVSIGSGSKSRDKVVIVEEVSLQSVFDA 148
           A+GVQIDAP +DGEANAALL+YMSSVLGVK+RQVS+GSGSKSRDKVVIVE+++ QSVF A
Sbjct: 61  AVGVQIDAPARDGEANAALLEYMSSVLGVKRRQVSLGSGSKSRDKVVIVEDMTQQSVFQA 120

Query: 149 LNKA 153
           L++A
Sbjct: 121 LSQA 122

[Close]

BLAST of Spg027148 vs. TAIR 10
Match: AT5G63440.2 (Protein of unknown function (DUF167) )

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 30/98 (30.61%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 56  PSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPPKDGEANAALLDYMSSVL 115
           P C+  +    V + I  +  ++ ++IT    D + V + AP   GEAN  LL++M  VL
Sbjct: 133 PPCISQLDGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGRVL 192

Query: 116 GVKKRQVSIGSGSKSRDKVVIVEEVSLQSVFDALNKAL 154
           G++  Q+++  G  S+ K+++VE++S + V++ L +A+
Sbjct: 193 GLRLSQMTLQRGWNSKSKLLVVEDLSARQVYEKLLEAV 230

[Close]

BLAST of Spg027148 vs. TAIR 10
Match: AT5G63440.3 (Protein of unknown function (DUF167) )

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 30/98 (30.61%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 56  PSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPPKDGEANAALLDYMSSVL 115
           P C+  +    V + I  +  ++ ++IT    D + V + AP   GEAN  LL++M  VL
Sbjct: 114 PPCISQLDGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGRVL 173

Query: 116 GVKKRQVSIGSGSKSRDKVVIVEEVSLQSVFDALNKAL 154
           G++  Q+++  G  S+ K+++VE++S + V++ L +A+
Sbjct: 174 GLRLSQMTLQRGWNSKSKLLVVEDLSARQVYEKLLEAV 211

The following BLAST results are available for this feature:

BLAST of Spg027148 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151587.1	3.3e-61	89.19	uncharacterized protein LOC101218498 [Cucumis sativus]	[more]
XP_008460904.1	2.2e-60	89.19	PREDICTED: UPF0235 protein LHK_03181 [Cucumis melo]	[more]
XP_038902101.1	2.7e-55	93.75	UPF0235 protein C15orf40 homolog isoform X2 [Benincasa hispida]	[more]
XP_022971730.1	2.3e-54	94.44	UPF0235 protein C15orf40 homolog [Cucurbita maxima]	[more]
XP_023512400.1	9.8e-53	92.06	UPF0235 protein C15orf40 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg027148 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q505I4	6.6e-12	42.34	UPF0235 protein C15orf40 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1	[more]
Q9CRC3	2.5e-11	40.54	UPF0235 protein C15orf40 homolog OS=Mus musculus OX=10090 PE=1 SV=1	[more]
Q8WUR7	7.4e-11	37.01	UPF0235 protein C15orf40 OS=Homo sapiens OX=9606 GN=C15orf40 PE=1 SV=2	[more]
Q3ZBP8	1.3e-10	37.01	UPF0235 protein C15orf40 homolog OS=Bos taurus OX=9913 PE=2 SV=1	[more]
Q54UW1	3.1e-09	29.60	UPF0235 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0280783 PE=3 SV=1	[more]

BLAST of Spg027148 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMY2	1.6e-61	89.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G301550 PE=3 SV=1	[more]
A0A1S3CDI8	1.1e-60	89.19	UPF0235 protein LHK_03181 OS=Cucumis melo OX=3656 GN=LOC103499646 PE=3 SV=1	[more]
A0A6J1I6J5	1.1e-54	94.44	UPF0235 protein C15orf40 homolog OS=Cucurbita maxima OX=3661 GN=LOC111470398 PE=...	[more]
A0A6J1EMK4	4.0e-52	91.27	uncharacterized protein LOC111434889 OS=Cucurbita moschata OX=3662 GN=LOC1114348...	[more]
A0A6J1CR98	5.2e-52	89.84	uncharacterized protein LOC111013451 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Spg027148 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49170.1	1.0e-39	71.77	Protein of unknown function (DUF167)	[more]
AT5G63440.2	1.2e-08	30.61	Protein of unknown function (DUF167)	[more]
AT5G63440.3	1.2e-08	30.61	Protein of unknown function (DUF167)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003746	Protein of unknown function DUF167	SMART	SM01152	DUF167_2	coord: 63..139 e-value: 6.1E-29 score: 112.2
IPR003746	Protein of unknown function DUF167	PFAM	PF02594	DUF167	coord: 67..137 e-value: 5.6E-24 score: 84.0
IPR003746	Protein of unknown function DUF167	HAMAP	MF_00634	UPF0235	coord: 63..151 score: 15.913514
IPR036591	YggU-like superfamily	GENE3D	3.30.1200.10		coord: 58..153 e-value: 1.5E-25 score: 90.9
IPR036591	YggU-like superfamily	SUPERFAMILY	69786	YggU-like	coord: 57..142
None	No IPR available	PANTHER	PTHR47817	OS04G0686300 PROTEIN	coord: 29..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg027148.1	Spg027148.1	mRNA