Spg027109 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg027109
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold8: 4175282 .. 4176745 (+)
RNA-Seq Expression	Spg027109
Synteny	Spg027109

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCGTAGCACTTCTCGTTTCTCTTTCATTCTCAGAACCTGTGCTCATCTTTCTGCAGTTGCCCAAGCAAAACAAGCCCACGCTCAAATCCTCATCCATGGCTTACTTCCACATTTAACTCTTCAAACTGATCTCCTTTTGGTGTATTGCAAATGTGGGCTTCTGCATGACGCCCGCCAAGTTTTTGACAAAATGACTCACAGAAATATGCACTCCTGGAACATCTTGATTGCTTCTTATGTTCACAGTTCTTTGCACTCTGATGCAATAAGTGTGTTTAATGAGTTTAGGGACCTTGGTTTTTTGCCTGACCACTATACTCTGCCCCAGATGTTCAAGGCTAGCGTTGGTACAAGAGATGTTTATTTGGGGAAGAGACTCCATTGTTGGACAATTAGGTTGGGGTTTGAAGGATATGTTGTTGTAGACAGTACGGTTTTAGACTTTTATGCCAAATGTGGGGCTGTGGGTGATGCTAGGAAGGTGTTTGATAATATGATCTTGAAAGATACAATTTCTTGGAATTCAATGATTTCTGGGTATGGGAGGGCTGGGCTTTATGGAGATGCATTGGATTGTTTCAGGCAGATGCTCTTGGAAGGGGTGAGGATGGATTTAATGACTATTCCAAGCATTTTGAATGCTTGTGGAGGGGTAGGAGATTTGAGAAAAGGTAAAGAGATTCATTGCTTAGTTTTGAAGAGTCTGGTATTTGCTGAGGATGTTGCAATTGGAAACTCAATGATTGATATGTATTCGAAGTGTGGAAGCCTGCTTGATTCAGAAAAGGTCTTTTGGAATATGAACAGCTTGAATATTGTTACATGGACCACAATGATATCTTGTTATGGGGCACATGGGAAAGGAGAGAAATCTTTGTTCCTGTTTAACAAAATGAAAGATTGTGGAATCCAACCAAATTCTGTTACACTGACAGCCATTTTGGCTAGCTGTAGCCATGCAGGTTACATCAAGGAAGGTTGGAGAATTTTCAAGTCTATTGTTTCAGATTATGAGGTTGAACCGAGTGTAGAACATTATGCTTGTGTCGTTGATCTTCTGAGTCGTTTCGGCTTTTTGCAGGAAGCATTTTCGTTAATAAGAAACATGAAACCCACAGTTGCTGCAAGCATCTGGGGCGCTCTGCTTTCTGGTTGTATGATGCACAAAAACCTTGAGATTGGAGAAATTGCAGCTAACCAGCTTTTCAAGTTGGAACCTACAAACCCAAGCAATTTTATAGCCTTGATTAGTATATATGAATCTCTTGGTATATGGCATGGTGTTTCACTCGCTAGAGCGAAAATGAGAGATCTCGGTTTGACCAAACTCCCTGGCTGTAGTTGGATAACCATTGACGGAGTTGTATATAAATTCTACGGAGGGGACAATTCTCACCCTCTGATTTTGAGAATATTTGAAACGTTAAATGCAATTAAGACAAGCAACTGTAAACTGTGA

mRNA sequence

ATGTCTCGTAGCACTTCTCGTTTCTCTTTCATTCTCAGAACCTGTGCTCATCTTTCTGCAGTTGCCCAAGCAAAACAAGCCCACGCTCAAATCCTCATCCATGGCTTACTTCCACATTTAACTCTTCAAACTGATCTCCTTTTGGTGTATTGCAAATGTGGGCTTCTGCATGACGCCCGCCAAGTTTTTGACAAAATGACTCACAGAAATATGCACTCCTGGAACATCTTGATTGCTTCTTATGTTCACAGTTCTTTGCACTCTGATGCAATAAGTGTGTTTAATGAGTTTAGGGACCTTGGTTTTTTGCCTGACCACTATACTCTGCCCCAGATGTTCAAGGCTAGCGTTGGTACAAGAGATGTTTATTTGGGGAAGAGACTCCATTGTTGGACAATTAGGTTGGGGTTTGAAGGATATGTTGTTGTAGACAGTACGGTTTTAGACTTTTATGCCAAATGTGGGGCTGTGGGTGATGCTAGGAAGGTGTTTGATAATATGATCTTGAAAGATACAATTTCTTGGAATTCAATGATTTCTGGGTATGGGAGGGCTGGGCTTTATGGAGATGCATTGGATTGTTTCAGGCAGATGCTCTTGGAAGGGGTGAGGATGGATTTAATGACTATTCCAAGCATTTTGAATGCTTGTGGAGGGGTAGGAGATTTGAGAAAAGGTAAAGAGATTCATTGCTTAGTTTTGAAGAGTCTGGTATTTGCTGAGGATGTTGCAATTGGAAACTCAATGATTGATATGTATTCGAAGTGTGGAAGCCTGCTTGATTCAGAAAAGGTCTTTTGGAATATGAACAGCTTGAATATTGTTACATGGACCACAATGATATCTTGTTATGGGGCACATGGGAAAGGAGAGAAATCTTTGTTCCTGTTTAACAAAATGAAAGATTGTGGAATCCAACCAAATTCTGTTACACTGACAGCCATTTTGGCTAGCTGTAGCCATGCAGGTTACATCAAGGAAGGTTGGAGAATTTTCAAGTCTATTGTTTCAGATTATGAGGTTGAACCGAGTGTAGAACATTATGCTTGTGTCGTTGATCTTCTGAGTCGTTTCGGCTTTTTGCAGGAAGCATTTTCGTTAATAAGAAACATGAAACCCACAGTTGCTGCAAGCATCTGGGGCGCTCTGCTTTCTGGTTGTATGATGCACAAAAACCTTGAGATTGGAGAAATTGCAGCTAACCAGCTTTTCAAGTTGGAACCTACAAACCCAAGCAATTTTATAGCCTTGATTAGTATATATGAATCTCTTGGTATATGGCATGGTGTTTCACTCGCTAGAGCGAAAATGAGAGATCTCGGTTTGACCAAACTCCCTGGCTGTAGTTGGATAACCATTGACGGAGTTGTATATAAATTCTACGGAGGGGACAATTCTCACCCTCTGATTTTGAGAATATTTGAAACGTTAAATGCAATTAAGACAAGCAACTGTAAACTGTGA

Coding sequence (CDS)

ATGTCTCGTAGCACTTCTCGTTTCTCTTTCATTCTCAGAACCTGTGCTCATCTTTCTGCAGTTGCCCAAGCAAAACAAGCCCACGCTCAAATCCTCATCCATGGCTTACTTCCACATTTAACTCTTCAAACTGATCTCCTTTTGGTGTATTGCAAATGTGGGCTTCTGCATGACGCCCGCCAAGTTTTTGACAAAATGACTCACAGAAATATGCACTCCTGGAACATCTTGATTGCTTCTTATGTTCACAGTTCTTTGCACTCTGATGCAATAAGTGTGTTTAATGAGTTTAGGGACCTTGGTTTTTTGCCTGACCACTATACTCTGCCCCAGATGTTCAAGGCTAGCGTTGGTACAAGAGATGTTTATTTGGGGAAGAGACTCCATTGTTGGACAATTAGGTTGGGGTTTGAAGGATATGTTGTTGTAGACAGTACGGTTTTAGACTTTTATGCCAAATGTGGGGCTGTGGGTGATGCTAGGAAGGTGTTTGATAATATGATCTTGAAAGATACAATTTCTTGGAATTCAATGATTTCTGGGTATGGGAGGGCTGGGCTTTATGGAGATGCATTGGATTGTTTCAGGCAGATGCTCTTGGAAGGGGTGAGGATGGATTTAATGACTATTCCAAGCATTTTGAATGCTTGTGGAGGGGTAGGAGATTTGAGAAAAGGTAAAGAGATTCATTGCTTAGTTTTGAAGAGTCTGGTATTTGCTGAGGATGTTGCAATTGGAAACTCAATGATTGATATGTATTCGAAGTGTGGAAGCCTGCTTGATTCAGAAAAGGTCTTTTGGAATATGAACAGCTTGAATATTGTTACATGGACCACAATGATATCTTGTTATGGGGCACATGGGAAAGGAGAGAAATCTTTGTTCCTGTTTAACAAAATGAAAGATTGTGGAATCCAACCAAATTCTGTTACACTGACAGCCATTTTGGCTAGCTGTAGCCATGCAGGTTACATCAAGGAAGGTTGGAGAATTTTCAAGTCTATTGTTTCAGATTATGAGGTTGAACCGAGTGTAGAACATTATGCTTGTGTCGTTGATCTTCTGAGTCGTTTCGGCTTTTTGCAGGAAGCATTTTCGTTAATAAGAAACATGAAACCCACAGTTGCTGCAAGCATCTGGGGCGCTCTGCTTTCTGGTTGTATGATGCACAAAAACCTTGAGATTGGAGAAATTGCAGCTAACCAGCTTTTCAAGTTGGAACCTACAAACCCAAGCAATTTTATAGCCTTGATTAGTATATATGAATCTCTTGGTATATGGCATGGTGTTTCACTCGCTAGAGCGAAAATGAGAGATCTCGGTTTGACCAAACTCCCTGGCTGTAGTTGGATAACCATTGACGGAGTTGTATATAAATTCTACGGAGGGGACAATTCTCACCCTCTGATTTTGAGAATATTTGAAACGTTAAATGCAATTAAGACAAGCAACTGTAAACTGTGA

Protein sequence

MSRSTSRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDARQVFDKMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTRDVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMISGYGRAGLYGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLVFAEDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKMKDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGFLQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISIYESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFETLNAIKTSNCKL

Homology

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BLAST of Spg027109 vs. NCBI nr
Match: XP_023512346.1 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 873.2 bits (2255), Expect = 1.0e-249
Identity = 422/487 (86.65%), Postives = 448/487 (91.99%), Query Frame = 0


Query: 1   MSRSTSRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDAR 60
           MS+STSRFS ILR CA L+AV QAKQAHAQILIHGL+PHLTL TDLLLVYCKCG+LHDAR
Sbjct: 1   MSQSTSRFSLILRNCARLNAVVQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR 60

Query: 61  QVFDKMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTR 120
           +VFDKMTHRNMHSWNILIASYVHSSLH DAI+VFNEFR LGFLPDHYTLPQMFK SVG  
Sbjct: 61  KVFDKMTHRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG 120

Query: 121 DVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMIS 180
           DVY+GKRLHCWTIRLGFEGYVVV STVLDFYAK G VGDA+KVFDNMILKDTISWNSMIS
Sbjct: 121 DVYMGKRLHCWTIRLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180

Query: 181 GYGRAGLYGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLVFA 240
           GYGRAGLYGDALDCF++ML EGVRMD+MTIPS+LNACGG GDLRKGKEIHCLVLKS +F 
Sbjct: 181 GYGRAGLYGDALDCFKRMLFEGVRMDIMTIPSVLNACGGEGDLRKGKEIHCLVLKSQLFV 240

Query: 241 EDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKM 300
            DVAIGNS+IDMY+KCGSL D+E+VF NM+S+NIVTWTTMISCYGAHGKGEKSL LFNKM
Sbjct: 241 ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSMNIVTWTTMISCYGAHGKGEKSLALFNKM 300

Query: 301 KDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGF 360
           K CGIQPNSVTLTAILASCSHAGYI EGWRIFKS VSDYEVE +VEHYACVVDLLSRFGF
Sbjct: 301 KACGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVELTVEHYACVVDLLSRFGF 360

Query: 361 LQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISI 420
           LQEAF LIRNMK T AASIWGALLSGCMMHKNLEIGEIAANQLFKLEP NPSNFIALI I
Sbjct: 361 LQEAFMLIRNMKHTAAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPMNPSNFIALIGI 420

Query: 421 YESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFETLNAI 480
           YESLG+ HG SL R KMRDLGLTKLPGCSWITI+GVV+KFYGGD SHPL LRIFETL+A+
Sbjct: 421 YESLGMSHGDSLTREKMRDLGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480

Query: 481 KTS--NC 486
           K +  NC
Sbjct: 481 KQASVNC 487

[Close]

BLAST of Spg027109 vs. NCBI nr
Match: XP_022971622.1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 869.8 bits (2246), Expect = 1.1e-248
Identity = 419/488 (85.86%), Postives = 450/488 (92.21%), Query Frame = 0


Query: 1   MSRSTSRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDAR 60
           MS+STSRFSFILR CA L+AVAQAKQAHAQI+IHGL+PHLTL TD+LLVYCKCGL+HDAR
Sbjct: 1   MSQSTSRFSFILRNCARLNAVAQAKQAHAQIVIHGLIPHLTLVTDILLVYCKCGLVHDAR 60

Query: 61  QVFDKMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTR 120
           +VFDKMTHRNMHSWNILIASYVHSSLH DAI+V NEFR LGFLPDHYTLPQMFK SVG  
Sbjct: 61  KVFDKMTHRNMHSWNILIASYVHSSLHFDAINVLNEFRGLGFLPDHYTLPQMFKVSVGIG 120

Query: 121 DVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMIS 180
           DVY+GKRLHCWTI+LGFEGYVVV STVLDFYAK G VGDA+KVFDNMILKDTISWNSMIS
Sbjct: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180

Query: 181 GYGRAGLYGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLVFA 240
           GYGRAGLYGDALDCF++ML EGV+MD+MTIPS+LNACGG GDLRKGKEIHCLVLKS +F 
Sbjct: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGKEIHCLVLKSQLFV 240

Query: 241 EDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKM 300
            DVAIGNS+IDMY+KCGSL D+E VF NM+S+NIVTWTTMISCYGAHGKGEKSL LFNKM
Sbjct: 241 ADVAIGNSLIDMYAKCGSLFDAENVFRNMSSVNIVTWTTMISCYGAHGKGEKSLALFNKM 300

Query: 301 KDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGF 360
           KDCGIQPNSVTLTAILASCSHAGYI EGWRIF SIVSDYEVE +VEHYACVVDLLSRFGF
Sbjct: 301 KDCGIQPNSVTLTAILASCSHAGYISEGWRIFNSIVSDYEVELTVEHYACVVDLLSRFGF 360

Query: 361 LQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISI 420
           LQEAF LIR+MK T AASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALI I
Sbjct: 361 LQEAFMLIRSMKHTAAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALIGI 420

Query: 421 YESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFETLNAI 480
           YESLG+   VSL R KMRDLGLTKLPGCSWITI+GVV+KFYGGD SHPL LRIFETL+A+
Sbjct: 421 YESLGMLDCVSLTREKMRDLGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480

Query: 481 KTS--NCK 487
           K +  NC+
Sbjct: 481 KQASVNCE 488

[Close]

BLAST of Spg027109 vs. NCBI nr
Match: XP_022932001.1 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 868.6 bits (2243), Expect = 2.5e-248
Identity = 417/490 (85.10%), Postives = 450/490 (91.84%), Query Frame = 0


Query: 1   MSRSTSRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDAR 60
           MS+STSRFS ILR CA L+ VAQAKQAHAQILIHGL+PHLTL TDLLLVYCKCG+LHDAR
Sbjct: 1   MSQSTSRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR 60

Query: 61  QVFDKMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTR 120
           +VFDKMT RNMHSWNILIASYVHSSLH DAI+VFNEFR LGFLPDHYTLPQMFK SVG  
Sbjct: 61  KVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG 120

Query: 121 DVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMIS 180
           DVY+GKRLHCWTI+LGFEGYVVV STVLDFYAK G VGDA+KVFDNMILKDTISWNSMIS
Sbjct: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180

Query: 181 GYGRAGLYGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLVFA 240
           GYGRAGLYGDALDCF++ML EGV+MD+MTIPS+LNACGG GDLRKG+EIHCLVLKS +F 
Sbjct: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFV 240

Query: 241 EDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKM 300
            DVAIGNS+IDMY+KCGSL D+E+VF NM+S NIVTWTTMISCYGAHGKGEKSL LFNKM
Sbjct: 241 ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKM 300

Query: 301 KDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGF 360
           KDCGIQPNSVTLTAILASCSHAGYI EGWRIFKS VSDYEVEP+VEHYACVVDLLSRFGF
Sbjct: 301 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGF 360

Query: 361 LQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISI 420
           LQEAF LI NMK T AAS+WGALLSGCMMHKN+EIGEIAAN+LFKLEP NPSNFIALI I
Sbjct: 361 LQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGI 420

Query: 421 YESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFETLNAI 480
           YESLG+ HGVSL R KMR+LGLTKLPGCSWITI+GVV+KFYGGD SHPL LRIFETL+A+
Sbjct: 421 YESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480

Query: 481 KTSN---CKL 488
           K ++   CKL
Sbjct: 481 KQASVNCCKL 490

[Close]

BLAST of Spg027109 vs. NCBI nr
Match: XP_022932000.1 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 868.2 bits (2242), Expect = 3.3e-248
Identity = 416/488 (85.25%), Postives = 449/488 (92.01%), Query Frame = 0


Query: 1   MSRSTSRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDAR 60
           MS+STSRFS ILR CA L+ VAQAKQAHAQILIHGL+PHLTL TDLLLVYCKCG+LHDAR
Sbjct: 1   MSQSTSRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR 60

Query: 61  QVFDKMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTR 120
           +VFDKMT RNMHSWNILIASYVHSSLH DAI+VFNEFR LGFLPDHYTLPQMFK SVG  
Sbjct: 61  KVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG 120

Query: 121 DVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMIS 180
           DVY+GKRLHCWTI+LGFEGYVVV STVLDFYAK G VGDA+KVFDNMILKDTISWNSMIS
Sbjct: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180

Query: 181 GYGRAGLYGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLVFA 240
           GYGRAGLYGDALDCF++ML EGV+MD+MTIPS+LNACGG GDLRKG+EIHCLVLKS +F 
Sbjct: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFV 240

Query: 241 EDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKM 300
            DVAIGNS+IDMY+KCGSL D+E+VF NM+S NIVTWTTMISCYGAHGKGEKSL LFNKM
Sbjct: 241 ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKM 300

Query: 301 KDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGF 360
           KDCGIQPNSVTLTAILASCSHAGYI EGWRIFKS VSDYEVEP+VEHYACVVDLLSRFGF
Sbjct: 301 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGF 360

Query: 361 LQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISI 420
           LQEAF LI NMK T AAS+WGALLSGCMMHKN+EIGEIAAN+LFKLEP NPSNFIALI I
Sbjct: 361 LQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGI 420

Query: 421 YESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFETLNAI 480
           YESLG+ HGVSL R KMR+LGLTKLPGCSWITI+GVV+KFYGGD SHPL LRIFETL+A+
Sbjct: 421 YESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480

Query: 481 KTS--NCK 487
           K +  NC+
Sbjct: 481 KQASVNCE 488

[Close]

BLAST of Spg027109 vs. NCBI nr
Match: KAG7011122.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 867.5 bits (2240), Expect = 5.6e-248
Identity = 415/488 (85.04%), Postives = 449/488 (92.01%), Query Frame = 0


Query: 1   MSRSTSRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDAR 60
           MS+STSRFS ILR CA L+AV QA+QAHAQILIHGL+PHLTL TDLLLVYCKCG+LHDAR
Sbjct: 1   MSQSTSRFSLILRNCARLNAVVQARQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR 60

Query: 61  QVFDKMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTR 120
           +VFDKMT RNMHSWNILIASYVHSSLH DAI+VFNEFR LGFLPDHYTLPQMFK SVG  
Sbjct: 61  KVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG 120

Query: 121 DVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMIS 180
           DVY+GKRLHCWTI+LGFEGYVVV STVLDFYAK G VGDA+KVFDNMILKDTISWNSMIS
Sbjct: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180

Query: 181 GYGRAGLYGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLVFA 240
           GYGRAGLYGDALDCF++ML EGV+MD+MTIPS+LNACGG GDLRKG+EIHCLVLKS +F 
Sbjct: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFV 240

Query: 241 EDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKM 300
            DVAIGNS+IDMY+KCGSL D+E+VF NM+S NIVTWTTMISCYGAHGKGEKSL LFNKM
Sbjct: 241 ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKM 300

Query: 301 KDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGF 360
           KDCGIQPNSVTLTAILASCSHAGYI EGWRIFKS VSDYEVEP+VEHYACVVDLLSRFGF
Sbjct: 301 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGF 360

Query: 361 LQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISI 420
           LQEAF LI NMK T AAS+WGALLSGCMMHKN+EIGEIAAN+LFKLEP NPSNFIALI I
Sbjct: 361 LQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGI 420

Query: 421 YESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFETLNAI 480
           YESLG+ HGVSL R KMR+LGLTKLPGCSWITI+GVV+KFYGGD SHPL LRIFETL+A+
Sbjct: 421 YESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480

Query: 481 KTS--NCK 487
           K +  NC+
Sbjct: 481 KQASVNCE 488

[Close]

BLAST of Spg027109 vs. ExPASy Swiss-Prot
Match: Q9LZ19 (Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 357.1 bits (915), Expect = 3.2e-97
Identity = 175/468 (37.39%), Postives = 282/468 (60.26%), Query Frame = 0


Query: 11  ILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDARQVFDKMTHRN 70
           IL+ CA   AV +AK  H +I+   L   +TL   L+  Y KCG +  ARQVFD M  R+
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 71  MHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTRDVYLGKRLHC 130
           + SWN +I  Y  + + S+A+ +F E R+ GF    +T+  +  A     D    K+LHC
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186

Query: 131 WTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMISGYGRAGLYGD 190
            +++   +  + V + +LD YAKCG + DA +VF++M  K +++W+SM++GY +   Y +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246

Query: 191 ALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLVFAEDVAIGNSMI 250
           AL  +R+     +  +  T+ S++ AC  +  L +GK++H ++ KS  F  +V + +S +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS-GFGSNVFVASSAV 306

Query: 251 DMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKMKDCGIQPNSV 310
           DMY+KCGSL +S  +F  +   N+  W T+IS +  H + ++ + LF KM+  G+ PN V
Sbjct: 307 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 366

Query: 311 TLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGFLQEAFSLIRN 370
           T +++L+ C H G ++EG R FK + + Y + P+V HY+C+VD+L R G L EA+ LI++
Sbjct: 367 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 426

Query: 371 MKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISIYESLGIWHGV 430
           +     ASIWG+LL+ C ++KNLE+ E+AA +LF+LEP N  N + L +IY +   W  +
Sbjct: 427 IPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEI 486

Query: 431 SLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFETLN 479
           + +R  +RD  + K+ G SWI I   V+ F  G++ HP I  I  TL+
Sbjct: 487 AKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLD 533

[Close]

BLAST of Spg027109 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.4e-92
Identity = 185/482 (38.38%), Postives = 282/482 (58.51%), Query Frame = 0


Query: 6   SRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDARQVFDK 65
           S F   ++ C+ L  +   KQ H Q  + G    + + + L+++Y  CG L DAR+VFD+
Sbjct: 77  SSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDE 136

Query: 66  MTHRNMHSWNILIASYVHSSLHSDAISVF-------NEFRDLGFLPDHYTLPQMFKASVG 125
           +  RN+ SW  +I  Y  +    DA+S+F       N+  D  FL D   L  +  A   
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFL-DSMGLVSVISACSR 196

Query: 126 TRDVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKC--GAVGDARKVFDNMILKDTISWN 185
                L + +H + I+ GF+  V V +T+LD YAK   G V  ARK+FD ++ KD +S+N
Sbjct: 197 VPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN 256

Query: 186 SMISGYGRAGLYGDALDCFRQMLL-EGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLK 245
           S++S Y ++G+  +A + FR+++  + V  + +T+ ++L A    G LR GK IH  V++
Sbjct: 257 SIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR 316

Query: 246 SLVFAEDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLF 305
            +   +DV +G S+IDMY KCG +  + K F  M + N+ +WT MI+ YG HG   K+L 
Sbjct: 317 -MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALE 376

Query: 306 LFNKMKDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLL 365
           LF  M D G++PN +T  ++LA+CSHAG   EGWR F ++   + VEP +EHY C+VDLL
Sbjct: 377 LFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLL 436

Query: 366 SRFGFLQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFI 425
            R GFLQ+A+ LI+ MK    + IW +LL+ C +HKN+E+ EI+  +LF+L+ +N   ++
Sbjct: 437 GRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYM 496

Query: 426 ALISIYESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFE 478
            L  IY   G W  V   R  M++ GL K PG S + ++G V+ F  GD  HP   +I+E
Sbjct: 497 LLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYE 556

[Close]

BLAST of Spg027109 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 5.3e-92
Identity = 163/465 (35.05%), Postives = 264/465 (56.77%), Query Frame = 0


Query: 8   FSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDARQVFDKMT 67
           ++ +L+ C     + Q +  HA IL       + +   LL +Y KCG L +AR+VF+KM 
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 68  HRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTRDVYLGKR 127
            R+  +W  LI+ Y       DA+  FN+    G+ P+ +TL  + KA+   R    G +
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182

Query: 128 LHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMISGYGRAGL 187
           LH + ++ GF+  V V S +LD Y + G + DA+ VFD +  ++ +SWN++I+G+ R   
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242

Query: 188 YGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKS----LVFAEDV 247
              AL+ F+ ML +G R    +  S+  AC   G L +GK +H  ++KS    + FA   
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA--- 302

Query: 248 AIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKMKDC 307
             GN+++DMY+K GS+ D+ K+F  +   ++V+W ++++ Y  HG G+++++ F +M+  
Sbjct: 303 --GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 362

Query: 308 GIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGFLQE 367
           GI+PN ++  ++L +CSH+G + EGW  ++ +  D  + P   HY  VVDLL R G L  
Sbjct: 363 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNR 422

Query: 368 AFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISIYES 427
           A   I  M     A+IW ALL+ C MHKN E+G  AA  +F+L+P +P   + L +IY S
Sbjct: 423 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 482

Query: 428 LGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHP 469
            G W+  +  R KM++ G+ K P CSW+ I+  ++ F   D  HP
Sbjct: 483 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHP 521

[Close]

BLAST of Spg027109 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 7.0e-92
Identity = 168/427 (39.34%), Postives = 262/427 (61.36%), Query Frame = 0


Query: 46  LLLVYCKCGLLHDARQVFDKMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPD 105
           LL +Y KCG L  A+ VF +M+ R++ S+  +IA Y    L  +A+ +F E  + G  PD
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396

Query: 106 HYTLPQMFKASVGTRDVYLGKRLHCWTIR--LGFEGYVVVDSTVLDFYAKCGAVGDARKV 165
            YT+  +       R +  GKR+H W     LGF+  + V + ++D YAKCG++ +A  V
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSMQEAELV 456

Query: 166 FDNMILKDTISWNSMISGYGRAGLYGDALDCFRQMLLEGVRM--DLMTIPSILNACGGVG 225
           F  M +KD ISWN++I GY +     +AL  F  +LLE  R   D  T+  +L AC  + 
Sbjct: 457 FSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLS 516

Query: 226 DLRKGKEIHCLVLKSLVFAEDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMI 285
              KG+EIH  ++++  F+ D  + NS++DMY+KCG+LL +  +F ++ S ++V+WT MI
Sbjct: 517 AFDKGREIHGYIMRNGYFS-DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 576

Query: 286 SCYGAHGKGEKSLFLFNKMKDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEV 345
           + YG HG G++++ LFN+M+  GI+ + ++  ++L +CSH+G + EGWR F  +  + ++
Sbjct: 577 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 636

Query: 346 EPSVEHYACVVDLLSRFGFLQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAAN 405
           EP+VEHYAC+VD+L+R G L +A+  I NM     A+IWGALL GC +H ++++ E  A 
Sbjct: 637 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 696

Query: 406 QLFKLEPTNPSNFIALISIYESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFY 465
           ++F+LEP N   ++ + +IY     W  V   R ++   GL K PGCSWI I G V  F 
Sbjct: 697 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 756

Query: 466 GGDNSHP 469
            GD+S+P
Sbjct: 757 AGDSSNP 759

[Close]

BLAST of Spg027109 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 4.5e-91
Identity = 160/470 (34.04%), Postives = 275/470 (58.51%), Query Frame = 0


Query: 1   MSRSTSRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDAR 60
           +S  +  F  +L+ C+ LS +   +  HAQ+   G    + +Q  L+ +Y KC  L  AR
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174

Query: 61  QVFD--KMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVG 120
            VF+   +  R + SW  ++++Y  +    +A+ +F++ R +   PD   L  +  A   
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234

Query: 121 TRDVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSM 180
            +D+  G+ +H   +++G E    +  ++   YAKCG V  A+ +FD M   + I WN+M
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294

Query: 181 ISGYGRAGLYGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLV 240
           ISGY + G   +A+D F +M+ + VR D ++I S ++AC  VG L + + ++  V +S  
Sbjct: 295 ISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS-D 354

Query: 241 FAEDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFN 300
           + +DV I +++IDM++KCGS+  +  VF      ++V W+ MI  YG HG+  +++ L+ 
Sbjct: 355 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 414

Query: 301 KMKDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRF 360
            M+  G+ PN VT   +L +C+H+G ++EGW  F   ++D+++ P  +HYACV+DLL R 
Sbjct: 415 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNR-MADHKINPQQQHYACVIDLLGRA 474

Query: 361 GFLQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALI 420
           G L +A+ +I+ M      ++WGALLS C  H+++E+GE AA QLF ++P+N  +++ L 
Sbjct: 475 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLS 534

Query: 421 SIYESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHP 469
           ++Y +  +W  V+  R +M++ GL K  GCSW+ + G +  F  GD SHP
Sbjct: 535 NLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHP 582

[Close]

BLAST of Spg027109 vs. ExPASy TrEMBL
Match: A0A6J1I2G9 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470305 PE=4 SV=1)

HSP 1 Score: 869.8 bits (2246), Expect = 5.5e-249
Identity = 419/488 (85.86%), Postives = 450/488 (92.21%), Query Frame = 0


Query: 1   MSRSTSRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDAR 60
           MS+STSRFSFILR CA L+AVAQAKQAHAQI+IHGL+PHLTL TD+LLVYCKCGL+HDAR
Sbjct: 1   MSQSTSRFSFILRNCARLNAVAQAKQAHAQIVIHGLIPHLTLVTDILLVYCKCGLVHDAR 60

Query: 61  QVFDKMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTR 120
           +VFDKMTHRNMHSWNILIASYVHSSLH DAI+V NEFR LGFLPDHYTLPQMFK SVG  
Sbjct: 61  KVFDKMTHRNMHSWNILIASYVHSSLHFDAINVLNEFRGLGFLPDHYTLPQMFKVSVGIG 120

Query: 121 DVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMIS 180
           DVY+GKRLHCWTI+LGFEGYVVV STVLDFYAK G VGDA+KVFDNMILKDTISWNSMIS
Sbjct: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180

Query: 181 GYGRAGLYGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLVFA 240
           GYGRAGLYGDALDCF++ML EGV+MD+MTIPS+LNACGG GDLRKGKEIHCLVLKS +F 
Sbjct: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGKEIHCLVLKSQLFV 240

Query: 241 EDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKM 300
            DVAIGNS+IDMY+KCGSL D+E VF NM+S+NIVTWTTMISCYGAHGKGEKSL LFNKM
Sbjct: 241 ADVAIGNSLIDMYAKCGSLFDAENVFRNMSSVNIVTWTTMISCYGAHGKGEKSLALFNKM 300

Query: 301 KDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGF 360
           KDCGIQPNSVTLTAILASCSHAGYI EGWRIF SIVSDYEVE +VEHYACVVDLLSRFGF
Sbjct: 301 KDCGIQPNSVTLTAILASCSHAGYISEGWRIFNSIVSDYEVELTVEHYACVVDLLSRFGF 360

Query: 361 LQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISI 420
           LQEAF LIR+MK T AASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALI I
Sbjct: 361 LQEAFMLIRSMKHTAAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALIGI 420

Query: 421 YESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFETLNAI 480
           YESLG+   VSL R KMRDLGLTKLPGCSWITI+GVV+KFYGGD SHPL LRIFETL+A+
Sbjct: 421 YESLGMLDCVSLTREKMRDLGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480

Query: 481 KTS--NCK 487
           K +  NC+
Sbjct: 481 KQASVNCE 488

[Close]

BLAST of Spg027109 vs. ExPASy TrEMBL
Match: A0A6J1EV55 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438329 PE=4 SV=1)

HSP 1 Score: 868.6 bits (2243), Expect = 1.2e-248
Identity = 417/490 (85.10%), Postives = 450/490 (91.84%), Query Frame = 0


Query: 1   MSRSTSRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDAR 60
           MS+STSRFS ILR CA L+ VAQAKQAHAQILIHGL+PHLTL TDLLLVYCKCG+LHDAR
Sbjct: 1   MSQSTSRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR 60

Query: 61  QVFDKMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTR 120
           +VFDKMT RNMHSWNILIASYVHSSLH DAI+VFNEFR LGFLPDHYTLPQMFK SVG  
Sbjct: 61  KVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG 120

Query: 121 DVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMIS 180
           DVY+GKRLHCWTI+LGFEGYVVV STVLDFYAK G VGDA+KVFDNMILKDTISWNSMIS
Sbjct: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180

Query: 181 GYGRAGLYGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLVFA 240
           GYGRAGLYGDALDCF++ML EGV+MD+MTIPS+LNACGG GDLRKG+EIHCLVLKS +F 
Sbjct: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFV 240

Query: 241 EDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKM 300
            DVAIGNS+IDMY+KCGSL D+E+VF NM+S NIVTWTTMISCYGAHGKGEKSL LFNKM
Sbjct: 241 ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKM 300

Query: 301 KDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGF 360
           KDCGIQPNSVTLTAILASCSHAGYI EGWRIFKS VSDYEVEP+VEHYACVVDLLSRFGF
Sbjct: 301 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGF 360

Query: 361 LQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISI 420
           LQEAF LI NMK T AAS+WGALLSGCMMHKN+EIGEIAAN+LFKLEP NPSNFIALI I
Sbjct: 361 LQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGI 420

Query: 421 YESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFETLNAI 480
           YESLG+ HGVSL R KMR+LGLTKLPGCSWITI+GVV+KFYGGD SHPL LRIFETL+A+
Sbjct: 421 YESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480

Query: 481 KTSN---CKL 488
           K ++   CKL
Sbjct: 481 KQASVNCCKL 490

[Close]

BLAST of Spg027109 vs. ExPASy TrEMBL
Match: A0A6J1F0Z8 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438329 PE=4 SV=1)

HSP 1 Score: 868.2 bits (2242), Expect = 1.6e-248
Identity = 416/488 (85.25%), Postives = 449/488 (92.01%), Query Frame = 0


Query: 1   MSRSTSRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDAR 60
           MS+STSRFS ILR CA L+ VAQAKQAHAQILIHGL+PHLTL TDLLLVYCKCG+LHDAR
Sbjct: 1   MSQSTSRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR 60

Query: 61  QVFDKMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTR 120
           +VFDKMT RNMHSWNILIASYVHSSLH DAI+VFNEFR LGFLPDHYTLPQMFK SVG  
Sbjct: 61  KVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG 120

Query: 121 DVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMIS 180
           DVY+GKRLHCWTI+LGFEGYVVV STVLDFYAK G VGDA+KVFDNMILKDTISWNSMIS
Sbjct: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180

Query: 181 GYGRAGLYGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLVFA 240
           GYGRAGLYGDALDCF++ML EGV+MD+MTIPS+LNACGG GDLRKG+EIHCLVLKS +F 
Sbjct: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFV 240

Query: 241 EDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKM 300
            DVAIGNS+IDMY+KCGSL D+E+VF NM+S NIVTWTTMISCYGAHGKGEKSL LFNKM
Sbjct: 241 ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKM 300

Query: 301 KDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGF 360
           KDCGIQPNSVTLTAILASCSHAGYI EGWRIFKS VSDYEVEP+VEHYACVVDLLSRFGF
Sbjct: 301 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGF 360

Query: 361 LQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISI 420
           LQEAF LI NMK T AAS+WGALLSGCMMHKN+EIGEIAAN+LFKLEP NPSNFIALI I
Sbjct: 361 LQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGI 420

Query: 421 YESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFETLNAI 480
           YESLG+ HGVSL R KMR+LGLTKLPGCSWITI+GVV+KFYGGD SHPL LRIFETL+A+
Sbjct: 421 YESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480

Query: 481 KTS--NCK 487
           K +  NC+
Sbjct: 481 KQASVNCE 488

[Close]

BLAST of Spg027109 vs. ExPASy TrEMBL
Match: A0A5D3BTE8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00690 PE=4 SV=1)

HSP 1 Score: 859.4 bits (2219), Expect = 7.4e-246
Identity = 410/481 (85.24%), Postives = 442/481 (91.89%), Query Frame = 0


Query: 1   MSRSTSRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDAR 60
           +S STSRFSF+LR+CAH  A+AQAKQ HAQILIHG LPHLTL TDLLLVYCKCG LHDAR
Sbjct: 3   LSHSTSRFSFLLRSCAHSYAIAQAKQTHAQILIHGFLPHLTLITDLLLVYCKCGFLHDAR 62

Query: 61  QVFDKMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTR 120
            VFDKMTHRNMHSWNILIASYVH+SL+ DA++VFNEFRD GFLPDHYTLPQMFKASVGT 
Sbjct: 63  NVFDKMTHRNMHSWNILIASYVHNSLYFDALNVFNEFRDHGFLPDHYTLPQMFKASVGTG 122

Query: 121 DVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMIS 180
           DVYLGKRLHCWTI+LGF GYVVVDSTVLDFYAK G VGDARKVFD+MI KDT+SWNSMIS
Sbjct: 123 DVYLGKRLHCWTIKLGFVGYVVVDSTVLDFYAKYGIVGDARKVFDDMIFKDTVSWNSMIS 182

Query: 181 GYGRAGLYGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLVFA 240
           GYGRAG+Y DALDCF++MLLEG  MD MTIPS+LNACGG GDLRKGKEIHCLVLKS V A
Sbjct: 183 GYGRAGVYRDALDCFKRMLLEGANMDFMTIPSVLNACGGEGDLRKGKEIHCLVLKSPVLA 242

Query: 241 EDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKM 300
            DVA+GNS+IDMYSKCGSLL+SEKVFWNM+ LNIVTWTTMISCYGAHGKGEKSL LFNKM
Sbjct: 243 ADVAVGNSLIDMYSKCGSLLNSEKVFWNMSRLNIVTWTTMISCYGAHGKGEKSLVLFNKM 302

Query: 301 KDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGF 360
           KDCGIQPNSVTLTAILASCSHAGYI EGWRIF+SIVSD +VEP+VEHYACVVDLLSRFGF
Sbjct: 303 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFQSIVSDDKVEPTVEHYACVVDLLSRFGF 362

Query: 361 LQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISI 420
           L+EAF LIRNMK   AASIWGALLSGCM+H+NLE GEIAANQLFKLEPTNPSNFIALISI
Sbjct: 363 LKEAFLLIRNMKVKAAASIWGALLSGCMIHRNLEFGEIAANQLFKLEPTNPSNFIALISI 422

Query: 421 YESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFETLNAI 480
           YESLG+ HGVS+ R KMR LGLTK+PGCS ITIDGVV+KFYGG NSHPL LRIFETLN++
Sbjct: 423 YESLGMLHGVSVTREKMRGLGLTKVPGCSCITIDGVVHKFYGGGNSHPLALRIFETLNSV 482

Query: 481 K 482
           +
Sbjct: 483 R 483

[Close]

BLAST of Spg027109 vs. ExPASy TrEMBL
Match: A0A1S3CDI3 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103499640 PE=4 SV=1)

HSP 1 Score: 859.4 bits (2219), Expect = 7.4e-246
Identity = 410/481 (85.24%), Postives = 442/481 (91.89%), Query Frame = 0


Query: 1   MSRSTSRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDAR 60
           +S STSRFSF+LR+CAH  A+AQAKQ HAQILIHG LPHLTL TDLLLVYCKCG LHDAR
Sbjct: 3   LSHSTSRFSFLLRSCAHSYAIAQAKQTHAQILIHGFLPHLTLITDLLLVYCKCGFLHDAR 62

Query: 61  QVFDKMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTR 120
            VFDKMTHRNMHSWNILIASYVH+SL+ DA++VFNEFRD GFLPDHYTLPQMFKASVGT 
Sbjct: 63  NVFDKMTHRNMHSWNILIASYVHNSLYFDALNVFNEFRDHGFLPDHYTLPQMFKASVGTG 122

Query: 121 DVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMIS 180
           DVYLGKRLHCWTI+LGF GYVVVDSTVLDFYAK G VGDARKVFD+MI KDT+SWNSMIS
Sbjct: 123 DVYLGKRLHCWTIKLGFVGYVVVDSTVLDFYAKYGIVGDARKVFDDMIFKDTVSWNSMIS 182

Query: 181 GYGRAGLYGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLVFA 240
           GYGRAG+Y DALDCF++MLLEG  MD MTIPS+LNACGG GDLRKGKEIHCLVLKS V A
Sbjct: 183 GYGRAGVYRDALDCFKRMLLEGANMDFMTIPSVLNACGGEGDLRKGKEIHCLVLKSPVLA 242

Query: 241 EDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKM 300
            DVA+GNS+IDMYSKCGSLL+SEKVFWNM+ LNIVTWTTMISCYGAHGKGEKSL LFNKM
Sbjct: 243 ADVAVGNSLIDMYSKCGSLLNSEKVFWNMSRLNIVTWTTMISCYGAHGKGEKSLVLFNKM 302

Query: 301 KDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGF 360
           KDCGIQPNSVTLTAILASCSHAGYI EGWRIF+SIVSD +VEP+VEHYACVVDLLSRFGF
Sbjct: 303 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFQSIVSDDKVEPTVEHYACVVDLLSRFGF 362

Query: 361 LQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISI 420
           L+EAF LIRNMK   AASIWGALLSGCM+H+NLE GEIAANQLFKLEPTNPSNFIALISI
Sbjct: 363 LKEAFLLIRNMKVKAAASIWGALLSGCMIHRNLEFGEIAANQLFKLEPTNPSNFIALISI 422

Query: 421 YESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFETLNAI 480
           YESLG+ HGVS+ R KMR LGLTK+PGCS ITIDGVV+KFYGG NSHPL LRIFETLN++
Sbjct: 423 YESLGMLHGVSVTREKMRGLGLTKVPGCSCITIDGVVHKFYGGGNSHPLALRIFETLNSV 482

Query: 481 K 482
           +
Sbjct: 483 R 483

[Close]

BLAST of Spg027109 vs. TAIR 10
Match: AT5G04780.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 357.1 bits (915), Expect = 2.3e-98
Identity = 175/468 (37.39%), Postives = 282/468 (60.26%), Query Frame = 0


Query: 11  ILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDARQVFDKMTHRN 70
           IL+ CA   AV +AK  H +I+   L   +TL   L+  Y KCG +  ARQVFD M  R+
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 71  MHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTRDVYLGKRLHC 130
           + SWN +I  Y  + + S+A+ +F E R+ GF    +T+  +  A     D    K+LHC
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186

Query: 131 WTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMISGYGRAGLYGD 190
            +++   +  + V + +LD YAKCG + DA +VF++M  K +++W+SM++GY +   Y +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246

Query: 191 ALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLVFAEDVAIGNSMI 250
           AL  +R+     +  +  T+ S++ AC  +  L +GK++H ++ KS  F  +V + +S +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS-GFGSNVFVASSAV 306

Query: 251 DMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKMKDCGIQPNSV 310
           DMY+KCGSL +S  +F  +   N+  W T+IS +  H + ++ + LF KM+  G+ PN V
Sbjct: 307 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 366

Query: 311 TLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGFLQEAFSLIRN 370
           T +++L+ C H G ++EG R FK + + Y + P+V HY+C+VD+L R G L EA+ LI++
Sbjct: 367 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 426

Query: 371 MKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISIYESLGIWHGV 430
           +     ASIWG+LL+ C ++KNLE+ E+AA +LF+LEP N  N + L +IY +   W  +
Sbjct: 427 IPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEI 486

Query: 431 SLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFETLN 479
           + +R  +RD  + K+ G SWI I   V+ F  G++ HP I  I  TL+
Sbjct: 487 AKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLD 533

[Close]

BLAST of Spg027109 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 341.7 bits (875), Expect = 1.0e-93
Identity = 185/482 (38.38%), Postives = 282/482 (58.51%), Query Frame = 0


Query: 6   SRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDARQVFDK 65
           S F   ++ C+ L  +   KQ H Q  + G    + + + L+++Y  CG L DAR+VFD+
Sbjct: 77  SSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDE 136

Query: 66  MTHRNMHSWNILIASYVHSSLHSDAISVF-------NEFRDLGFLPDHYTLPQMFKASVG 125
           +  RN+ SW  +I  Y  +    DA+S+F       N+  D  FL D   L  +  A   
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFL-DSMGLVSVISACSR 196

Query: 126 TRDVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKC--GAVGDARKVFDNMILKDTISWN 185
                L + +H + I+ GF+  V V +T+LD YAK   G V  ARK+FD ++ KD +S+N
Sbjct: 197 VPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN 256

Query: 186 SMISGYGRAGLYGDALDCFRQMLL-EGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLK 245
           S++S Y ++G+  +A + FR+++  + V  + +T+ ++L A    G LR GK IH  V++
Sbjct: 257 SIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR 316

Query: 246 SLVFAEDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLF 305
            +   +DV +G S+IDMY KCG +  + K F  M + N+ +WT MI+ YG HG   K+L 
Sbjct: 317 -MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALE 376

Query: 306 LFNKMKDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLL 365
           LF  M D G++PN +T  ++LA+CSHAG   EGWR F ++   + VEP +EHY C+VDLL
Sbjct: 377 LFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLL 436

Query: 366 SRFGFLQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFI 425
            R GFLQ+A+ LI+ MK    + IW +LL+ C +HKN+E+ EI+  +LF+L+ +N   ++
Sbjct: 437 GRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYM 496

Query: 426 ALISIYESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHPLILRIFE 478
            L  IY   G W  V   R  M++ GL K PG S + ++G V+ F  GD  HP   +I+E
Sbjct: 497 LLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYE 556

[Close]

BLAST of Spg027109 vs. TAIR 10
Match: AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 339.7 bits (870), Expect = 3.8e-93
Identity = 163/465 (35.05%), Postives = 264/465 (56.77%), Query Frame = 0


Query: 8   FSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDARQVFDKMT 67
           ++ +L+ C     + Q +  HA IL       + +   LL +Y KCG L +AR+VF+KM 
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 68  HRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVGTRDVYLGKR 127
            R+  +W  LI+ Y       DA+  FN+    G+ P+ +TL  + KA+   R    G +
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182

Query: 128 LHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSMISGYGRAGL 187
           LH + ++ GF+  V V S +LD Y + G + DA+ VFD +  ++ +SWN++I+G+ R   
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242

Query: 188 YGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKS----LVFAEDV 247
              AL+ F+ ML +G R    +  S+  AC   G L +GK +H  ++KS    + FA   
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA--- 302

Query: 248 AIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFNKMKDC 307
             GN+++DMY+K GS+ D+ K+F  +   ++V+W ++++ Y  HG G+++++ F +M+  
Sbjct: 303 --GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 362

Query: 308 GIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRFGFLQE 367
           GI+PN ++  ++L +CSH+G + EGW  ++ +  D  + P   HY  VVDLL R G L  
Sbjct: 363 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNR 422

Query: 368 AFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALISIYES 427
           A   I  M     A+IW ALL+ C MHKN E+G  AA  +F+L+P +P   + L +IY S
Sbjct: 423 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 482

Query: 428 LGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHP 469
            G W+  +  R KM++ G+ K P CSW+ I+  ++ F   D  HP
Sbjct: 483 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHP 521

[Close]

BLAST of Spg027109 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 339.3 bits (869), Expect = 5.0e-93
Identity = 168/427 (39.34%), Postives = 262/427 (61.36%), Query Frame = 0


Query: 46  LLLVYCKCGLLHDARQVFDKMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPD 105
           LL +Y KCG L  A+ VF +M+ R++ S+  +IA Y    L  +A+ +F E  + G  PD
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396

Query: 106 HYTLPQMFKASVGTRDVYLGKRLHCWTIR--LGFEGYVVVDSTVLDFYAKCGAVGDARKV 165
            YT+  +       R +  GKR+H W     LGF+  + V + ++D YAKCG++ +A  V
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSMQEAELV 456

Query: 166 FDNMILKDTISWNSMISGYGRAGLYGDALDCFRQMLLEGVRM--DLMTIPSILNACGGVG 225
           F  M +KD ISWN++I GY +     +AL  F  +LLE  R   D  T+  +L AC  + 
Sbjct: 457 FSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLS 516

Query: 226 DLRKGKEIHCLVLKSLVFAEDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMI 285
              KG+EIH  ++++  F+ D  + NS++DMY+KCG+LL +  +F ++ S ++V+WT MI
Sbjct: 517 AFDKGREIHGYIMRNGYFS-DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 576

Query: 286 SCYGAHGKGEKSLFLFNKMKDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEV 345
           + YG HG G++++ LFN+M+  GI+ + ++  ++L +CSH+G + EGWR F  +  + ++
Sbjct: 577 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 636

Query: 346 EPSVEHYACVVDLLSRFGFLQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAAN 405
           EP+VEHYAC+VD+L+R G L +A+  I NM     A+IWGALL GC +H ++++ E  A 
Sbjct: 637 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 696

Query: 406 QLFKLEPTNPSNFIALISIYESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFY 465
           ++F+LEP N   ++ + +IY     W  V   R ++   GL K PGCSWI I G V  F 
Sbjct: 697 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 756

Query: 466 GGDNSHP 469
            GD+S+P
Sbjct: 757 AGDSSNP 759

[Close]

BLAST of Spg027109 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 336.7 bits (862), Expect = 3.2e-92
Identity = 160/470 (34.04%), Postives = 275/470 (58.51%), Query Frame = 0


Query: 1   MSRSTSRFSFILRTCAHLSAVAQAKQAHAQILIHGLLPHLTLQTDLLLVYCKCGLLHDAR 60
           +S  +  F  +L+ C+ LS +   +  HAQ+   G    + +Q  L+ +Y KC  L  AR
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174

Query: 61  QVFD--KMTHRNMHSWNILIASYVHSSLHSDAISVFNEFRDLGFLPDHYTLPQMFKASVG 120
            VF+   +  R + SW  ++++Y  +    +A+ +F++ R +   PD   L  +  A   
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234

Query: 121 TRDVYLGKRLHCWTIRLGFEGYVVVDSTVLDFYAKCGAVGDARKVFDNMILKDTISWNSM 180
            +D+  G+ +H   +++G E    +  ++   YAKCG V  A+ +FD M   + I WN+M
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294

Query: 181 ISGYGRAGLYGDALDCFRQMLLEGVRMDLMTIPSILNACGGVGDLRKGKEIHCLVLKSLV 240
           ISGY + G   +A+D F +M+ + VR D ++I S ++AC  VG L + + ++  V +S  
Sbjct: 295 ISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS-D 354

Query: 241 FAEDVAIGNSMIDMYSKCGSLLDSEKVFWNMNSLNIVTWTTMISCYGAHGKGEKSLFLFN 300
           + +DV I +++IDM++KCGS+  +  VF      ++V W+ MI  YG HG+  +++ L+ 
Sbjct: 355 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 414

Query: 301 KMKDCGIQPNSVTLTAILASCSHAGYIKEGWRIFKSIVSDYEVEPSVEHYACVVDLLSRF 360
            M+  G+ PN VT   +L +C+H+G ++EGW  F   ++D+++ P  +HYACV+DLL R 
Sbjct: 415 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNR-MADHKINPQQQHYACVIDLLGRA 474

Query: 361 GFLQEAFSLIRNMKPTVAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALI 420
           G L +A+ +I+ M      ++WGALLS C  H+++E+GE AA QLF ++P+N  +++ L 
Sbjct: 475 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLS 534

Query: 421 SIYESLGIWHGVSLARAKMRDLGLTKLPGCSWITIDGVVYKFYGGDNSHP 469
           ++Y +  +W  V+  R +M++ GL K  GCSW+ + G +  F  GD SHP
Sbjct: 535 NLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHP 582

The following BLAST results are available for this feature:

BLAST of Spg027109 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512346.1	1.0e-249	86.65	pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isofor...	[more]
XP_022971622.1	1.1e-248	85.86	pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like isofor...	[more]
XP_022932001.1	2.5e-248	85.10	pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isofor...	[more]
XP_022932000.1	3.3e-248	85.25	pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isofor...	[more]
KAG7011122.1	5.6e-248	85.04	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of Spg027109 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ19	3.2e-97	37.39	Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidop...	[more]
Q9LW32	1.4e-92	38.38	Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop...	[more]
Q9LIQ7	5.3e-92	35.05	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop...	[more]
Q9SN39	7.0e-92	39.34	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
Q9LTV8	4.5e-91	34.04	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX...	[more]

BLAST of Spg027109 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2G9	5.5e-249	85.86	pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like isofor...	[more]
A0A6J1EV55	1.2e-248	85.10	pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isofor...	[more]
A0A6J1F0Z8	1.6e-248	85.25	pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isofor...	[more]
A0A5D3BTE8	7.4e-246	85.24	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CDI3	7.4e-246	85.24	pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like OS=Cuc...	[more]

BLAST of Spg027109 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04780.1	2.3e-98	37.39	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G26782.1	1.0e-93	38.38	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G24000.1	3.8e-93	35.05	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G18750.1	5.0e-93	39.34	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G12770.1	3.2e-92	34.04	mitochondrial editing factor 22	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 234..439 e-value: 7.8E-33 score: 116.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 2..121 e-value: 5.5E-18 score: 66.9 coord: 122..233 e-value: 6.8E-20 score: 73.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 273..319 e-value: 6.1E-12 score: 45.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 173..206 e-value: 5.2E-9 score: 33.7 coord: 72..105 e-value: 5.4E-6 score: 24.2 coord: 275..308 e-value: 6.8E-9 score: 33.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 47..70 e-value: 0.0047 score: 17.1 coord: 173..203 e-value: 1.4E-8 score: 34.4 coord: 145..169 e-value: 0.71 score: 10.3 coord: 348..372 e-value: 0.91 score: 9.9 coord: 73..102 e-value: 3.2E-4 score: 20.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 70..104 score: 10.205028
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 273..307 score: 12.101333
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 171..205 score: 12.101333
None	No IPR available	PANTHER	PTHR24015:SF1973	OS11G0213500 PROTEIN	coord: 3..482
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 3..482

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg027109.1	Spg027109.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding