Spg026998 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg026998
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold8: 8736717 .. 8737956 (-)
RNA-Seq Expression	Spg026998
Synteny	Spg026998

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAAAGACAACTAGAAGAAAGGGTGGAAAGGGTAGAGAAGGATGTGGTTGAAATCAGAGAAGCTTTACAAAGGATGACCAAGAACATTGATCGAATGTTCGTGATGATATTTGAACTCTCAGATGGTAAGGTTGGATTAACTTCCATGCTTACTACTAGATCATCTTAGAAACAAACAATGGCAGAAGAGAAGGAAGAATCGTGGGAATTGATGGGCAACAATGAAGATGAATCATTGCAGTGCAAAAGAGAGGGAGAAAAAGAAAAGCAGGTGAAAGAAGTTAAGAAAAGGGAAAGCTAGACTGTTTGGAAGACAAAGCTAGTGCGACAACAAAAAAAAAAAGGTTAGAATAAAGCTATTGAGGGCACATCCACCTATATTCCGTTGGATTCCGAATAAGCAAGTTGAAAAAATGTTCAAGGTGACGGAGTTGGAATTTCAAGGGAGACACTGACGACGAATGTTGTTGAAAATCCAGGGGAGGCGCCGACGACATAAGAGATTATCGAGTAGGGGAAGAAAAATTGAAGAAACGTGTTTGGGTGAGAGAATGAGGGAAGCGGCCAATGAAGACCGTTATAGACTTCGAAGTTGGTCGAAGAGGAAAACTTGGAGGCGACGACTTAAAGATGGTGAAATAACGAAGGATAGTGAAAGAACGGGAGGGGAGGCGGATGGAGGCCATTACTGCGGCAAAGGCGGGTTTGGTTGCAAAGGAAGGGACGAAGACGACGTCAAGGAAACTATCGGGGAGAAAGGGTTGTGAGTATACAGTGGGCCATTGAAGAAGGAAAAAAAGATTCAAAAGAAAGGGAAATTAACCCTAATCTGGTGGAACATCAATGGGGAGAAGAATCCATAAGTAAGGGGGATAGTAGACTGCTTGATGGGCTGGATTCAAGGAAAAAAAAGTGAGGCCCATTTCCTTCCAAAGATAGAAAAGGGGACCGTTAAACAAGACTGAATTGTGGGCTGGGTTTTCCTTTATTTTTAAGCCCAAGATTCAGCCCTACTTAACACCCAATTTTCACATGAAAAAAGCCATTATAGTGGTTAATGTTCAGCCTTTTACTCACGCAGTCTTCATCTTCACTGTGCCAGCTTACACCGCCAACCATCTCGACCATCCGTTGCTGCCATCTTGTCGGCCTTCACCACCAACTTGACACCATTTGTCGAAATCGCCACCAATCGCTGTCAACCACCACTTGTATCTGCCACTCACAATGGATGA

mRNA sequence

ATGGTGCAAAGACAACTAGAAGAAAGGGTGGAAAGGGTAGAGAAGGATGTGGTTGAAATCAGAGAAGCTTTACAAAGGATGACCAAGAACATTGATCGAATGTTCGTGATGATATTTGAACTCTCAGATGGTAAGGGGAGGCGCCGACGACATAAGAGATTATCGAGTAGGGGAAGAAAAATTGAAGAAACGTGTTTGGGTGAGAGAATGAGGGAAGCGGCCAATGAAGACCGTTATAGACTTCGAAGTTGGTCGAAGAGGAAAACTTGGAGGCGACGACTTAAAGATGGTGAAATAACGAAGGATAGTGAAAGAACGGGAGGGGAGGCGGATGGAGGCCATTACTGCGGCAAAGGCGGGTTTGGTTGCAAAGGAAGGGACGAAGACGACGTCAAGGAAACTATCGGGGAGAAAGGGTTTCTTCATCTTCACTGTGCCAGCTTACACCGCCAACCATCTCGACCATCCGTTGCTGCCATCTTGTCGGCCTTCACCACCAACTTGACACCATTTGTCGAAATCGCCACCAATCGCTGTCAACCACCACTTGTATCTGCCACTCACAATGGATGA

Coding sequence (CDS)

ATGGTGCAAAGACAACTAGAAGAAAGGGTGGAAAGGGTAGAGAAGGATGTGGTTGAAATCAGAGAAGCTTTACAAAGGATGACCAAGAACATTGATCGAATGTTCGTGATGATATTTGAACTCTCAGATGGTAAGGGGAGGCGCCGACGACATAAGAGATTATCGAGTAGGGGAAGAAAAATTGAAGAAACGTGTTTGGGTGAGAGAATGAGGGAAGCGGCCAATGAAGACCGTTATAGACTTCGAAGTTGGTCGAAGAGGAAAACTTGGAGGCGACGACTTAAAGATGGTGAAATAACGAAGGATAGTGAAAGAACGGGAGGGGAGGCGGATGGAGGCCATTACTGCGGCAAAGGCGGGTTTGGTTGCAAAGGAAGGGACGAAGACGACGTCAAGGAAACTATCGGGGAGAAAGGGTTTCTTCATCTTCACTGTGCCAGCTTACACCGCCAACCATCTCGACCATCCGTTGCTGCCATCTTGTCGGCCTTCACCACCAACTTGACACCATTTGTCGAAATCGCCACCAATCGCTGTCAACCACCACTTGTATCTGCCACTCACAATGGATGA

Protein sequence

MVQRQLEERVERVEKDVVEIREALQRMTKNIDRMFVMIFELSDGKGRRRRHKRLSSRGRKIEETCLGERMREAANEDRYRLRSWSKRKTWRRRLKDGEITKDSERTGGEADGGHYCGKGGFGCKGRDEDDVKETIGEKGFLHLHCASLHRQPSRPSVAAILSAFTTNLTPFVEIATNRCQPPLVSATHNG

Homology

The following BLAST results are available for this feature:

BLAST of Spg026998 vs.


Match Name	E-value	Identity	Description

BLAST of Spg026998 vs.


Match Name	E-value	Identity	Description

BLAST of Spg026998 vs.


Match Name	E-value	Identity	Description

BLAST of Spg026998 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg026998.1	Spg026998.1	mRNA