Spg026510 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg026510
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionpeptidyl-prolyl cis-trans isomerase G isoform X2
Locationscaffold8: 2183659 .. 2194021 (+)
RNA-Seq ExpressionSpg026510
SyntenySpg026510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCTCTTATCTTTGCTTGAGGGGGTTAGCCTTAGACCGAACTGGAGGGATGTGCGTTTCTGGAGTCTCGACCCCTCAGCGGGCTTTTCTTGCAGATCGTTTTTTCATTTCTTGGTCAATCCCTCCCCGGCTAGAGAGTCTGTTTTTTCGTGTCTTTGGAAGGTAAAAGTTCCGAAGAAAGTCTTGTTCTTTGTTTGGCAGGTCATCTTGGGCTGTGTTAACACTTTCGATAGGCTTTCGAGAGTGAAGGCTCCTGTGGTTGGCCCTTTCTGTTGCATTCTATGTCAGAAGGCAGAGGAAGATCTTGATCACTTGTTATGGGATTGTGAGTTTGCTCGCTCTATCTGGAGCCTCTTCTTTGAGGTCTTGAGTTTCAGTTTGTGAGCCATCGCTGTTGTAGGGAGACGATCGAGGAGTTCCTCTTCCATCCGCCGTTTCAGGAGAAAGGAAAGTTCTTGTGGCATGCTGACATTTGTGCTATTTTGTGTGGTTTATGGGGGGAAAGGAACAATAGAATTTTTAGAGGGATCGAGAGACATTCTTGTGAGGTTTGGGATAATATTAGGTTTCATGTCTCTTTATGGGCCTCGGTTGCCAAAACTTTTTGTAATTACCCTCTAGGTCTTATTTTGATTGATTGGAAACCCTTCATTTAGTTGGGTTCCTCTTTTGGGCTTGGTTTTTTTGGATGCCCTTGTATTCTTTCATTTTTTCTCAATGAAAGCTTGGTTCTTTATAAAAAAAAAAAGGTAAAATTGTTTCTTATCCAAAAGAAAGAAAAAAAGGAATTGTGATCAAGGAGTAAAAAAGCTGTTTGTGTCTTTTAATTTTTTTTAATAGGAAACGAGAAACTATATTGATAAAAGATGCTCATTACAAAAAATGGGAATGACTATCCCCATGAAGTCACTGGATTACAAAAAGGGGCCAGTTGGCAATGATATTCACAAGATTGTCATTACAAAACTCATTGGAAAGAGTACACCAAGTAGAAGCAAAGAGAGTCACTAAATCCCAAAAGCCCGTAAAGTTGGATGCCAAATCTTTGAAAATTCTTTGGTTCCTTTCAAGCCATAGCCTCCATAAAGATGCGTAAATCGCTTTTGTCCAAAGAACTAGCTTGTCCCTTTAAAGGAGAACCGACCTAGAGTTGGAGCACTGCATCCTTGCAGCCAAAAGGATAACGTCAACTAAGAAGCTTGGCCAAACTTGCATTGCCAAACCCAAAATGAAAGAACAAATGGTGGCGGTTTCAGGGAGTTTTGAAATTGTGTGTGTGTGTGTTGTTGTTTTTTTTTTTTTTTTTTTGGTCTTTGTCTTGCGATTTCCTGTGGTTTGGTTAGGTTGGATGTTCTATTGTCTATCAGAGTAGATGGAAAAAGTACATACATGCGTATGCGCATACTGATACATAATCAATTAATTAATTAAATAAAATGTTAATTTGGCAATTAGAACCTATGTTCTTCATTACACTGCTCTCTTGAGTCAGAAAAATGCATTGAGACTTTTTTTGCTATCCATAATAACACTTCTTTTTTAATTGAAGAATGGTTGAATCACGTTATGATCCTCTTTCTGTATCTTGCAGATTACAAGGTACGCTGTCTTATTATTCTGCTCTCCTTGATGTAACATTCTTCTCAACTGCGACTGCTGCAATCATGCTACCTTTTGCCAGATATATTATTCTAGTTTGCACTCCTTCTCCATAACTTTGCAAACTGCTTTTTTATCATTCTTATCATCTGTTTGAAATAGAAGTATTCTTTTAACTTGGACTTATTGCTCTTGCGTTTTCAATTTAGGGCAGTTCTTAACAATTCTTTAGGAAACAATCAGACATGAAAGGACAGGGTCCTATTTGAGAATAAGGTTTTTTTTTTTTTTTTTAATTTATTAGAAATACATTTCTTTGATGTTTGAAATTTATAAAAGGGAGAAATTTAGAGTTAATGTTAGAAGGGAGAGTAGTTACACCAATGTTCATTAAATAGCCGTGTTCTAATCTCTCTCATTGGCCTGGCTTTTTTTTTTTTTTCCTCTGGTGTATTCTTTCATTTGTTTTTCCAAGTTGTTCTTTTCATTAAAAAAAAAAATTATTTCATTCTTTATAATATTATTCTTGTTAAGACAATTATGCTCCATAATTGTCTCTTTTATTACTTCAATGAAAGTTTTGTTTCTGGTTAAAAAAACTATTATTTTCCCATGTGTGGTATGTTTTTCTTCTTCTTTTTTATTTTATTTTTATTTTTTTTATACTGCTTGTGCTTCAACTTTAAAGAACAATTGCACCTCAGTGCATTTTATGCTTTAACAAAAACAGATTCATGGCTTGGTTTCCAAAGAAAAAAAATAGATTCATGGTCTTAATTATCTTTTAAGGGGAAAAAAAACAGCTTCATGAAAGCCATCTTGTCTTGATAATGTTATCTGTATTAATGCTGATTTTTGATATTGAGAAGTAAAACTTTGAGACAAGCATGTCATATCTATTAAATCTTATTGCCTGTGTTAAATGCGAAACCTTTTTTCAGGAAAGCCTGAAGTCTCATCTGTGGTTTATAAAGTTGGTGAATGCATGCAAGAACTAATAAAGTTGTGGAAGGAACATGAATCGTCACAGATAGATAAAAATAGTGAAAGCTCCCAGAATATCCCCACTCTAGAAATTCGAATACCAGCTGAACATGTTACTGCTACAAATAGGCAGGTAAAAGCATATTTCTTTATGATTTTATCATAAAAGCAGAGTTAGGAGCATTATCTATCTGTTTTAAACTATCTATGATGACTGCAGTGCCTCTTTGTACCCGTAGCCTCCCCACCCCACCCCACCCCCAAAAAAAGTGTCTAAGAAAACAAAGGAGAATTATTTTTGGCTTGTTTTTTTTTTTTGGTATGCCCTTGTACTCCCTTCCATATTTGTTAGTGAAAGTTCAGTTTTTTATGAAAGAAAAACAAAGGAGAAAATCAACAAACAAGAACAAAAAGCTTGGGGAACTGAGCATTTGGAGGCTGGTTGCCCACTATTTTACTTGATTGGAGCCCCTTTCTATAGTTTGACTCTTTTTTTGTGAGTTTCTTTTTATGCCCATGATTTTTTTTTTCTCATTAGGTTGACTAGGTCACTGCGAGTTTACGAAAAATTTGGATAGATGGCGGAATAAAAAGCTGACTTGGTAGCACATTGGTTGGCTACTCCTTTATGGAAAAACTAAAATTACTCAAAGCCATGTGAAAAGAGTGGAACAAGAAAACTTTTGGAAATTTGAATGATGGAGACAATAATACCTCGTTCTTCCACAATTGGGCCAGAGGAAGGAGGAACTAGAATAAGATTGACTTCTTGGAGAGTTGGGAGGTTTTAAAGGAGAACAGTGAAATTGAGGAGGTTATTTCTTTTTTCTCAAATCTTTATGCTCTTCCCCCTTCCCCTAGGCCTTTTGTGGAAGGGTTGGAGCGCAACCCTATTTTGATCAGAAATCAGGTGGAGCTAAAGGCCTCTTTCACTTTAAAGGAAATCTGTAAGGTGATTTTCGATTTCGATAGGAATAAATCTCCTAGTCTAAACGACTTTACCTTGGTCTTCTTTTTAGGATTGTTGGGATAACGTTAAGGAGGACTTGTGAAAGGTTTTATGTGAGTTTGGTATTATTAATACTAGAATGAATGAAACCTATGTATGTCTTATCCCTAAGAAAGAGAAAGCAAACAAGGTGAAAGATGTTAGACCCATAAGTCTTGTTACAAGTTTGTACAAGATTAACTCAAGACCTTGGTGGATAGGTTTAGGAGAGTCCTTCCTAATATTGTTTCAATTCTCAGGGTGCAAGAGAGCGTCAAATTTTAGATCAAGTTCTTATTGCTTACGAAGCAATTGAGGATTGTAAGGAGAGGAAAATGGAAGGGGTGATTTTTAAGATTGACTCTGAGAATAAAAAAAAGATCGACTTTGAGAAAGCTTGTGATCACATGGATTGGAATTTCCTGGATAGAGTTTTGGGGTCAAATGGAGAGCCTGGATGTGGAATTGTGTCAGATCAACTAATTTCTCTATCTTTATCAATGGGAGGCTTAAAGGCAAAATTTTTGTGATTATGGATATTAGGCTAGGTGATCTATTATCGCCCTTCTTTTTTCTTTTAGTGGTGGATGTCCTCAGTAGACTTGTGACAACAAGAGTGGAAAAGAGTGTGACTGAGGGCTTTAAGGTGGGTAAGGACTTGGTTCACTTGTCTCGCTTTCAGTTTGCTGACAACACTCTCTTTTTTTGTTCAGGTCAAGAGAGCTCCTTTGTTAATCCTAACAGATTTTGGTTATTTGAAGTCATTTCTGATCTCAAGATTAATAGGGGAAAGATCTCTATCTTTGGTATAAATTGTTGTCCCTCCAAGTTTGCGTTGGTGGGTTATGAAGTGAGTCAGCTACTCATTTAGGGCTCCCCTTGGGTGGAAATTCCAAGAGCCAGGTGTTCTAGAATCATCTTGCAAAAGTTTTAGAAACGGTTGTCTACTTGGAACAAAGCTTTTTTTTTTCCTCTCCTCAAAGGAGGGAGACTTGCTCTCATCCAAGCTATCTTAGGTGGGATCCCTAGTTTCTTCTTGTCTCTGTTTAGGAACATGGTTTCAGTGAGTGAGAAGTAGAGCTTGATGAGGAATTTCTTGTGGGAAGGAGTTGAGGAATGGGTAGGATCCCTTTATCAAGCGAGAGTTGGTGTTGAAACCTGTCGAGCTTGGAGGTTTGGGTATTAGGAGGCTAAGGTTACGCAACAAGACTTTTTTGACTAAGTGGTTGTGGCGATTTTTCACGGAATTTTATACAATATGGTATAAGAGTGATTGTGGGTAGGTATGACCCTCACCCTTTTTGAGTGAGCCTCTGGTGGGGAGTCTAGGGACCTCAACAAAAATCTCCGGAAAGTTATTTCTTCTTGTTTCCCTTCTTTTTCTCAGTTTGTCAGATGCGATGTTGGGGAAGGCTCAAAAGTTTATTTTTGGGAGGACCATGGGTGGGTGGCAAACCCTTGTGTATTTTATTTCCTCATCCTTACTTCCTCTTAGATAAGAGGTTGCATTCGGTCGCCTCGGTGTTGCCTTCCCTTGATCTTTTAGCCTTGATCTCTTTAGGTTTTTGTTGCCCTCCTACTGATAGGGAGGCGACTGGTGTGGTGAGTCTTCTTTTTTTGTTTCGTGATAAGTTTGTTTCCCTTGGGATGGAGATGTTAGTGTTTAGACCCTTGATCCTTCAAGGAGTTTTTCTTGCCATTCCTGGCTCGTGTGCTACCCACGAGGCTTTTGTTTTCGCCTCACTTTGGAAGGTTCAAAGTCTTAATAAGGTAAAGTTTTTGGCTGGGCAAGTTTTACTTGGGAGGGTTAATCCTTTGGATCAAGTTCAAAGACACTCTTCTCTAGTTTTATTCTTGCAATGGTGCATTCTTTGCTGGAGGCATGATGAAGACTGAACCATTTGTTGTGGGAGAGTCAGTTTGCAAATTACCTTTTGAGGTCGTTGGAGAAGTTTGTTTGGCGTTAGCGGGGTTGCGTAATAGAGACAAGCCATCTATGATGGAGGAGGTGCTCTTGCCTCCTCCCTTTAGTGAGAAACAGAAAGTGTTGTGGAAGACTAGCTTCTTTGCTATTTTGTGGGGTATTTGGCTTGAGAGGAATAATAGGATCTTTAGAGGGATAGAGAAGTCGGGTGAGGAGGCTTGGGAAATTGTTAGAGGTAATTCTTCTTTGTGGGCGTCCGCGTTGGTCACTAGACCTTTTTGTAATTATACTCTCGGTCTTGGTCTTTTGGGTTGAACTCCTTTTTTGTAGTTAGTGTTGGACTCTCATTTCTTTCGGACTTGTTTTTTGTATGCCTTTGTATTCTTTCATCTTTTTCAATGAAAGTTTGGTTTCTTACCCAAAAAAAAAAACGAAAAGAAAAACCTTGTCTCTTGTAGACTAGCTAGATTCTCTCAACGCAGCATATGACAAACATCTTATCATTGATGGCCGACAAAAGCTCGATTCAGCTGAGTGTGGTCGGCTTGAAGAATCTTTCTAGGAAGGGATCAAGGGAGCTATTTTCAATGTTAAATTACAAATTTAGTCCAAGGATTTTCAAGTATGTGCCTAATAGGTTCTTAAACATTAAAAAGTGTCTAATAAATCTCTAGATTTTCAATTTTGTGTCTAGGTCCTTGAACTTTAAAAGTGTTCGATAAGTCCTTAAACTTCTAGCCAAATGGGTATGTTGGTATAATTATGAAAAAGAGGCATTATGGAGGAAACTTATTGGAAAAGCAAGGCTCATCTACCTATTTGAATTGGGCTTCTTTATCCATTGCCATTTGCGAAAGGACCATGGAAGTTCATTGTCAAGCATCGAGATCTTATCATCAGTAGAATCTGCCACCAAGTGGGTGATGGAGCCACAACTCTTTTCTAGATTGATCCTTGGGTAACATACCCTCCATTGGCCTCTCGGTATCCTCATTTATACAGGGTTTCGCATTGTAAAAAGTCCACGGTTAGAGAAGTGTGGAACACTGTCAACCACTTTTGGGACATTAAACTTGACAGAGATTTGAAGGATGAGGAAGCCATGGAGTCGGCAGAGTAGAGTGTTCACCTTGCACCGATTGTTCTTTCACATAGGGAAGACTCATGGAGTTGGTTACCTAACCCAAATGGATCCTCCTCCACTAAATCTCTTTTGTCCGATATGGGGTTTCAACTCATTTTTTGGAGCCATCACTGGCTAGAGGTCAATTTTTTCCTATAGAAAATTTCACACAGATCCATCAGTACTAAAGATATTCTCCAAAGAGGTGTTCTTTGTGCAAGGCCGCTGATGAAACACAAAGCCATATATTAATCCATTGCCCATTTGCTTCGAATTTTTGGAGCAAAATTCTTCAAGCTTTTGGGTGGTATCTGTCTATTCCTAAAGATGTGAAGGACTTCCTCCCCATTGTTTTGTTGGGACATCCCTTTAAGAAAGCTAAAACTTTGTTGTTGACGCACATCACTGGGGCTTTCTTTTGGGTTCTTTGGAGGGATAAAAATAGAGTTTTATATATATAATATATATAAAGTGCAGTCCCTTGATCTCATTATTTATATGTTATTTCTTGGTGTTAATTGTTTAACCTCTTTGCTTCCTATAATTAAGCTTCGCTTTAACCAATTGGAAAAACCTTTTGTAATCACCATGGATTTTCCATCATTTTCATAAACAAAGCTTATTTGGATTATTGTTTCAAAAGCCATTCTCTGAGACGGATCTTCTTGAGCTTATCAAGATTAAAGGCTCTTATTGGTGCTCCCTTTCAGATCGAGGTTACTCTTTCCTAGATATTTGTAATTTCTAGGGTGCTTTCTTGTAGTTCTATGCTTTATTTGCTTTATCTGTTTTTATTTCTTGGGTGTTCTTTTTGTTTTGCTCTATCTTTCTTTTCTCAGTCTAATCTGTGCGGTTTGTTGTTTCTCTTCTCTAGTAATCCTTTCTTTATGAATGAAAAGTTCTGTTTCCTTGAGAAAAAAGATCCTAAACTTTCAATTTGGTGTCTAATAGATCCGAAGTATTTGAGCTTCCATTTAATTTATTATTATTATTATTGTTATGTAAGGCCTCCTATTACACGCGTGTACCAGAGGAGGGGTAAGACAGGAAAGGAAAGAAAACAGTTAGAGGGAGGGGGGGCCACGGGGATCGTGGGAGTGAGTGTTGATGTAAAAGGAGGGCAGAGATTGTAAGGAGGCATGGAATATTTTGTCTTAGGCTGTGGAAAGTCTGAGGAGGAGAGTAACCAGCCTCTCGAATAGCTGGGAGTTCCTTTTGGACTCTGTTGACTTCCGCATTCCTACTTCGGTTACTAACTTGTCGCTCCCTTCTCGGCTATCTTCAGCTGTTTGCAAGATGACTGAGTCACCTCAGAGGATGACTGTCCCTTACTCACGTTTTTTCCAGCTACCAAGGCCAATAACATTCGTTGGTTATCCTTCATGTCTAGCGATATCTGTTCAAGCTGTTTGCCAAACAGTAGCAGCGTTTCCTGGACCTCACTCATTTCTTTATCGTGTCCATCCAGTCGTTCCTCTACTTGTTTCTGCGTCATGCTCCTCATTTTCTCCAGGATTTCACGTGCTCTAATACCACAAAATGTTAGGTATCAAACTTGATAATCCTGCAAATAATAACCAAAACACACAGACAACACAAACACAATGGAGATAAGACCCAATCTTTGGACTATTGAGAGTTCTTCAATAGCCAAAGAGGGTTATTCAGCCGATATATTGATATTCTCCAATGGAAACATGAACAAGGCAAAGAAAAGGAACTTCCCAGCTATTCGAGAGGCTGGTTACTCTCCTCCTCAGACTTTCCACAAACTAAGACAAAATATTCCCTGCCTCCCTACAATCTCTGCCCCCTTTTACATCAACACTCACTCCCACGATCCCCGTGGTCCCCCTTCCCTCTAACTGTTTTCTTTCTTTTCCTATCTTACCCCTCCTCTGGTACACGCACATAATAGGAGGCCTTACATGTTAATGTTATTATTATTATTTTGATAAAGAACCAACTTTCATTGAGAAAAAAAAATGAAAGAATACAAGCGAAGGACGTACAAAAGGCAAGCCCATTATAGGAAAGGACTCCAATCAAGCATAACGAGACCTAATGGATAATTACAAAATAATTTCGTGGGAAACATGGAATCTAGTAAGGGACCACACTTCCCCTGGACTTCTAACTATCCTCCTAAAGATTCTATTATTCCTCTCCCCCACTAATTCCACAAGAGTGCACACATGCCAACTTGCCACAAAAATCTCCCTAAAGATTCTATTAAGCTTCCATTGAAAATGATCCAAAGCAAGATATCTTTTAGGACTTTAAGATTTCCTTGTGGCCCAAAATAAATGATCCCTAGGTCCTTAGGCTGTTTTTCTTTGGCTATGGCTTTTGAATGAAATCTTTTGTTTCTATATATATATTGCATCAATGGTTAACTCACAAGGATCATTGATGGTATTCACCCAAACCATTCCACGGACTCTATTGCTTGAAATTTAGACTCCTCTGGAGCCTTTTGGCAAAATCAGCCACCAAGACCCTCCATTGAGGGCCGTACAGCCCCAAGATAATTTTTTGTGTGGTCCACGGCCCACACAGCCTAAATACCATGGAAAGAATGCAGGAGAAATCCTAACTTGATTTCATCCTCGAATATATGTTTTATGTGTAGGAGTGCAGAATCTAGTAGTCATCTGCCCATTCGCTTGTAAAGACTGTGAATTTCATTCGCAATTGCTTTGATACCGCGTGGTATCTCCCAAAGAATATAGAAGATGGCCTTATTGAATTACTTTCCGGCTGATTTGGTCTAATGCAGTCCGTACCTTTCTTTGGTATATTTGGAAAGAAAAATTCCAGAACTTTCTCACATAAGTATGGTTCTTTTATCAATTTTTGAGACCGCTTACAGCATACAGTATCAAAATGAAGTGCTCTTCACAATTCCTTTTCTAACTCACCTCTTTTGTTGATCCTTAGATAGGACGCCTTTTGTTTAATTCCTCCTTTTTGGCTCAGGGACTCCTCATCCCTAAGGCCGTTTAGGTTGTTCTCCCTTTTGTTAATAATATGTAGTTTCTCATTAGAAAAAATAGTAGGGGAAGAAACATCCTTTTACTTTTTGCTTATAATTTATTTATCTAAATTTGGAACTTAAATTTTGTTTCTTCCTCGCTGGTGTTACTGTTATGTTGCAATATGTGATCCTGTATTGTAACTCAAGGTGTTTTTTCTGTTGTTTCTATTTCGCTGGTGTTTTAAATACCCATTAGAGACCAGTATCAAAACAATTGAGGAAGGTTTTTGATAATTGTTCTTTAGTTCTTATTTTGCTTTGATTGGAGCCCTTTTCTTTAGGTGGGCTTCCTTTTGTGAGCATGTTTTTTGGATGTCCTTGTATTCTTTCATTTTTTCTCAATGAAAATTCGGTTCTTTATAAAAAAAAAAAAAAAAAAAAAGTAAAACCATTAAGGCCTGTAAATAATCCGTGCAGGTCAGGGGTGGACAGCTGTGGGGAACAGATGTGTACACATATGATTCAGATCTCGTTGCTGGTATGTAATGTCCCACTGTTTTCTACTTCATTGAATTGATGTGAATCTATGAGAAGTAAAACATCTATTTTTTTTTTCAAGTTCTCATGCACACAGGCTACTGTCGTCCAACAGCTTCTCCTCCTCCACCTGCAATCCAGGAGTTGCGGGCAACGATCAGAGTATTACCTCCACAAGACTGTAAGTCTGTTTTTCGTTATCTTGATTCTTGTTTAGTAGATGGCTAA

mRNA sequence

ATGGCCCTCTTATCTTTGCTTGAGGGGGTTAGCCTTAGACCGAACTGGAGGGATGTGCGTTTCTGGAGTCTCGACCCCTCAGCGGGCTTTTCTTGCAGATCGTTTTTTCATTTCTTGGTCAATCCCTCCCCGGCTAGAGAGTCTGTTTTTTCGTGTCTTTGGAAGGTAAAAGTTCCGAAGAAAGTCTTGTTCTTTGTTTGGCAGGTCATCTTGGGCTGTGTTAACACTTTCGATAGGCTTTCGAGAGTGAAGGCTCCTGTGGTTGGCCCTTTCTGTTGCATTCTATGTCAGAAGGCAGAGGAAGATCTTGATCACTTGTTATGGGATTGGAGACGATCGAGGAGTTCCTCTTCCATCCGCCGTTTCAGGAGAAAGGAAAGTTCTTGTGGCATGCTGACATTTGTGCTATTTTGTGTGGTTTATGGGGGGAAAGGAACAATAGAATTTTTAGAGGGATCGAGAGACATTCTTGTGAGATTACAAGGAAAGCCTGAAGTCTCATCTGTGGTTTATAAAGTTGGTGAATGCATGCAAGAACTAATAAAGTTGTGGAAGGAACATGAATCGTCACAGATAGATAAAAATAGTGAAAGCTCCCAGAATATCCCCACTCTAGAAATTCGAATACCAGCTGAACATGTTACTGCTACAAATAGGCAGGCTGTGGAAAGTCTGAGGAGGAGAGTAACCAGCCTCTCGAATAGCTGGGAGTTCCTTTTGGACTCTGTTGACTTCCGCATTCCTACTTCGGTTACTAACTTGTCGCTCCCTTCTCGGCTATCTTCAGCTGTTTGCAAGATGACTGAGTCACCTCAGAGGATGACTGTCCCTTACTCACGTTTTTTCCAGCTACCAAGGCCAATAACATTCGTTGGTTATCCTTCATGTCTAGCGATATCTGTTCAAGCTGTTTGCCAAACAGTAGCAGCGTTTCCTGGACCTCACTCATTTCTTTATCGTGTCCATCCAGTCGTTCCTCTACTTGTTTCTGCGTCATGCTCCTCATTTTCTCCAGGATTTCACGTCAGGGGTGGACAGCTGTGGGGAACAGATGTGTACACATATGATTCAGATCTCGTTGCTGTTCTCATGCACACAGGCTACTGTCGTCCAACAGCTTCTCCTCCTCCACCTGCAATCCAGGAGTTGCGGGCAACGATCAGAGTATTACCTCCACAAGACTGTAAGTCTGTTTTTCGTTATCTTGATTCTTGTTTAGTAGATGGCTAA

Coding sequence (CDS)

ATGGCCCTCTTATCTTTGCTTGAGGGGGTTAGCCTTAGACCGAACTGGAGGGATGTGCGTTTCTGGAGTCTCGACCCCTCAGCGGGCTTTTCTTGCAGATCGTTTTTTCATTTCTTGGTCAATCCCTCCCCGGCTAGAGAGTCTGTTTTTTCGTGTCTTTGGAAGGTAAAAGTTCCGAAGAAAGTCTTGTTCTTTGTTTGGCAGGTCATCTTGGGCTGTGTTAACACTTTCGATAGGCTTTCGAGAGTGAAGGCTCCTGTGGTTGGCCCTTTCTGTTGCATTCTATGTCAGAAGGCAGAGGAAGATCTTGATCACTTGTTATGGGATTGGAGACGATCGAGGAGTTCCTCTTCCATCCGCCGTTTCAGGAGAAAGGAAAGTTCTTGTGGCATGCTGACATTTGTGCTATTTTGTGTGGTTTATGGGGGGAAAGGAACAATAGAATTTTTAGAGGGATCGAGAGACATTCTTGTGAGATTACAAGGAAAGCCTGAAGTCTCATCTGTGGTTTATAAAGTTGGTGAATGCATGCAAGAACTAATAAAGTTGTGGAAGGAACATGAATCGTCACAGATAGATAAAAATAGTGAAAGCTCCCAGAATATCCCCACTCTAGAAATTCGAATACCAGCTGAACATGTTACTGCTACAAATAGGCAGGCTGTGGAAAGTCTGAGGAGGAGAGTAACCAGCCTCTCGAATAGCTGGGAGTTCCTTTTGGACTCTGTTGACTTCCGCATTCCTACTTCGGTTACTAACTTGTCGCTCCCTTCTCGGCTATCTTCAGCTGTTTGCAAGATGACTGAGTCACCTCAGAGGATGACTGTCCCTTACTCACGTTTTTTCCAGCTACCAAGGCCAATAACATTCGTTGGTTATCCTTCATGTCTAGCGATATCTGTTCAAGCTGTTTGCCAAACAGTAGCAGCGTTTCCTGGACCTCACTCATTTCTTTATCGTGTCCATCCAGTCGTTCCTCTACTTGTTTCTGCGTCATGCTCCTCATTTTCTCCAGGATTTCACGTCAGGGGTGGACAGCTGTGGGGAACAGATGTGTACACATATGATTCAGATCTCGTTGCTGTTCTCATGCACACAGGCTACTGTCGTCCAACAGCTTCTCCTCCTCCACCTGCAATCCAGGAGTTGCGGGCAACGATCAGAGTATTACCTCCACAAGACTGTAAGTCTGTTTTTCGTTATCTTGATTCTTGTTTAGTAGATGGCTAA

Protein sequence

MALLSLLEGVSLRPNWRDVRFWSLDPSAGFSCRSFFHFLVNPSPARESVFSCLWKVKVPKKVLFFVWQVILGCVNTFDRLSRVKAPVVGPFCCILCQKAEEDLDHLLWDWRRSRSSSSIRRFRRKESSCGMLTFVLFCVVYGGKGTIEFLEGSRDILVRLQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNRQAVESLRRRVTSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTESPQRMTVPYSRFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPLLVSASCSSFSPGFHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDCKSVFRYLDSCLVDG
Homology
[Close]
BLAST of Spg026510 vs. NCBI nr
Match: GFZ18702.1 (zinc finger CCCH domain protein [Actinidia rufa])

HSP 1 Score: 193.7 bits (491), Expect = 3.0e-45
Identity = 122/253 (48.22%), Postives = 151/253 (59.68%), Query Frame = 0 

Query: 160 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNR 219
           ++GK E ++VVY+VGECMQEL+KLWKE+ESSQ DK  E+SQ  PTLEIRIPAEHVTATNR
Sbjct: 32  IEGKLEANTVVYRVGECMQELMKLWKEYESSQADKTGENSQYSPTLEIRIPAEHVTATNR 91

Query: 220 QAVESLRRRV---------TSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTE- 279
           Q +  L   +         T   +S  + + S   R+P    +  LPS  S  + K++  
Sbjct: 92  QCLSRLPGLLHLFPGLPLGTRGHDSARWHVLSATLRVP----HHHLPSIGSVNIIKLSSI 151

Query: 280 --SPQRMTVPYSRFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPL 339
              P++     +   ++    T +G           VCQT  +                +
Sbjct: 152 FAEPRKHGYIKNVVVRVRGIGTGIGTAQVFYWYGMGVCQTTGS--------------GLV 211

Query: 340 LVSASC-----SSFSPGFHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQE 396
           L S+SC      S +    VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPA+QE
Sbjct: 212 LCSSSCPSPTDQSAAKADWVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAVQE 266

[Close]
BLAST of Spg026510 vs. NCBI nr
Match: KAG5528690.1 (hypothetical protein RHGRI_029384 [Rhododendron griersonianum])

HSP 1 Score: 190.7 bits (483), Expect = 2.6e-44
Identity = 115/236 (48.73%), Postives = 136/236 (57.63%), Query Frame = 0 

Query: 160 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNR 219
           +QGK E S+VVY+VGECM+EL+KLWKE+E+SQ D+ SE+SQN PTLEIRIPAEHVTATNR
Sbjct: 80  VQGKHEASTVVYRVGECMEELMKLWKEYEASQCDRKSENSQNGPTLEIRIPAEHVTATNR 139

Query: 220 QAVESLRRRVTSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTESPQRMTVPYS 279
           Q   S+R    SL+        S+ F +                    T  P R  V   
Sbjct: 140 Q---SIRFNTHSLA--------SIQFMV--------------------TYVPYRQQVQTG 199

Query: 280 RFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPLLVSASCSSFSPG 339
            +F +          S   +        V AF G              L+  +       
Sbjct: 200 DWFSV----------STFVLQEWLYKTVVIAFVGE-------------LLDGNVKGLFAE 259

Query: 340 FHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 396
             VRGGQLWGTDVYTYDSDLVA+LMHTG+CRPTASPPPPAIQELRAT+RVLPPQDC
Sbjct: 260 AFVRGGQLWGTDVYTYDSDLVAILMHTGFCRPTASPPPPAIQELRATVRVLPPQDC 261

[Close]
BLAST of Spg026510 vs. NCBI nr
Match: KAG6604709.1 (hypothetical protein SDJN03_02026, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-41
Identity = 111/236 (47.03%), Postives = 112/236 (47.46%), Query Frame = 0 

Query: 160 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNR 219
           LQGKPEVSSVVYKVGECMQELIKLWKEHE SQIDKN ES QN+PTLEIRIPAEHVTATNR
Sbjct: 451 LQGKPEVSSVVYKVGECMQELIKLWKEHEQSQIDKNGESPQNVPTLEIRIPAEHVTATNR 510

Query: 220 QAVESLRRRVTSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTESPQRMTVPYS 279
           Q                                                           
Sbjct: 511 Q----------------------------------------------------------- 565

Query: 280 RFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPLLVSASCSSFSPG 339
                                                                       
Sbjct: 571 ------------------------------------------------------------ 565

Query: 340 FHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 396
             VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC
Sbjct: 631 --VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 565

[Close]
BLAST of Spg026510 vs. NCBI nr
Match: XP_022947594.1 (uncharacterized protein LOC111451415 [Cucurbita moschata] >XP_022947596.1 uncharacterized protein LOC111451415 [Cucurbita moschata])

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-41
Identity = 111/236 (47.03%), Postives = 112/236 (47.46%), Query Frame = 0 

Query: 160 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNR 219
           LQGKPEVSSVVYKVGECMQELIKLWKEHE SQIDKN ES QN+PTLEIRIPAEHVTATNR
Sbjct: 451 LQGKPEVSSVVYKVGECMQELIKLWKEHEQSQIDKNGESPQNVPTLEIRIPAEHVTATNR 510

Query: 220 QAVESLRRRVTSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTESPQRMTVPYS 279
           Q                                                           
Sbjct: 511 Q----------------------------------------------------------- 565

Query: 280 RFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPLLVSASCSSFSPG 339
                                                                       
Sbjct: 571 ------------------------------------------------------------ 565

Query: 340 FHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 396
             VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC
Sbjct: 631 --VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 565

[Close]
BLAST of Spg026510 vs. NCBI nr
Match: XP_023532462.1 (uncharacterized protein LOC111794622 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532463.1 uncharacterized protein LOC111794622 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532464.1 uncharacterized protein LOC111794622 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023532466.1 uncharacterized protein LOC111794622 isoform X3 [Cucurbita pepo subsp. pepo] >XP_023532467.1 uncharacterized protein LOC111794622 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023532468.1 uncharacterized protein LOC111794622 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-41
Identity = 111/236 (47.03%), Postives = 112/236 (47.46%), Query Frame = 0 

Query: 160 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNR 219
           LQGKPEVSSVVYKVGECMQELIKLWKEHE SQIDKN ES QN+PTLEIRIPAEHVTATNR
Sbjct: 451 LQGKPEVSSVVYKVGECMQELIKLWKEHEQSQIDKNGESPQNVPTLEIRIPAEHVTATNR 510

Query: 220 QAVESLRRRVTSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTESPQRMTVPYS 279
           Q                                                           
Sbjct: 511 Q----------------------------------------------------------- 565

Query: 280 RFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPLLVSASCSSFSPG 339
                                                                       
Sbjct: 571 ------------------------------------------------------------ 565

Query: 340 FHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 396
             VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC
Sbjct: 631 --VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 565

[Close]
BLAST of Spg026510 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.9e-05
Identity = 32/96 (33.33%), Postives = 45/96 (46.88%), Query Frame = 0 

Query: 17  RDVRFWSLDPSAGFSCRSFFHFLV---NPSPARESVFSCLWKVKVPKKVLFFVWQVILGC 76
           RD   W       FS RS +  L     P P   S F+CLWKV+VP++V  F+W V    
Sbjct: 252 RDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQA 311

Query: 77  VNTFDRLSRVKAPVVGPFCCILCQKAEEDLDHLLWD 110
           V T +   R +  +     C +C+   E + H+L D
Sbjct: 312 VMTEE--ERHRRHLSASNVCQVCKGGVESMLHVLRD 345

[Close]
BLAST of Spg026510 vs. ExPASy TrEMBL
Match: A0A7J0H6I6 (Zinc finger CCCH domain protein OS=Actinidia rufa OX=165716 GN=Acr_27g0004410 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-45
Identity = 122/253 (48.22%), Postives = 151/253 (59.68%), Query Frame = 0 

Query: 160 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNR 219
           ++GK E ++VVY+VGECMQEL+KLWKE+ESSQ DK  E+SQ  PTLEIRIPAEHVTATNR
Sbjct: 32  IEGKLEANTVVYRVGECMQELMKLWKEYESSQADKTGENSQYSPTLEIRIPAEHVTATNR 91

Query: 220 QAVESLRRRV---------TSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTE- 279
           Q +  L   +         T   +S  + + S   R+P    +  LPS  S  + K++  
Sbjct: 92  QCLSRLPGLLHLFPGLPLGTRGHDSARWHVLSATLRVP----HHHLPSIGSVNIIKLSSI 151

Query: 280 --SPQRMTVPYSRFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPL 339
              P++     +   ++    T +G           VCQT  +                +
Sbjct: 152 FAEPRKHGYIKNVVVRVRGIGTGIGTAQVFYWYGMGVCQTTGS--------------GLV 211

Query: 340 LVSASC-----SSFSPGFHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQE 396
           L S+SC      S +    VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPA+QE
Sbjct: 212 LCSSSCPSPTDQSAAKADWVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAVQE 266

[Close]
BLAST of Spg026510 vs. ExPASy TrEMBL
Match: A0A6J1G6W1 (uncharacterized protein LOC111451415 OS=Cucurbita moschata OX=3662 GN=LOC111451415 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.8e-42
Identity = 111/236 (47.03%), Postives = 112/236 (47.46%), Query Frame = 0 

Query: 160 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNR 219
           LQGKPEVSSVVYKVGECMQELIKLWKEHE SQIDKN ES QN+PTLEIRIPAEHVTATNR
Sbjct: 451 LQGKPEVSSVVYKVGECMQELIKLWKEHEQSQIDKNGESPQNVPTLEIRIPAEHVTATNR 510

Query: 220 QAVESLRRRVTSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTESPQRMTVPYS 279
           Q                                                           
Sbjct: 511 Q----------------------------------------------------------- 565

Query: 280 RFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPLLVSASCSSFSPG 339
                                                                       
Sbjct: 571 ------------------------------------------------------------ 565

Query: 340 FHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 396
             VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC
Sbjct: 631 --VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 565

[Close]
BLAST of Spg026510 vs. ExPASy TrEMBL
Match: A0A6J1I0D2 (uncharacterized protein LOC111469718 OS=Cucurbita maxima OX=3661 GN=LOC111469718 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.2e-41
Identity = 110/236 (46.61%), Postives = 111/236 (47.03%), Query Frame = 0 

Query: 160 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNR 219
           LQGKPEVSSVVYKVGECMQELIKLWKEHE SQIDKN ES QN+P LEIRIPAEHVTATNR
Sbjct: 451 LQGKPEVSSVVYKVGECMQELIKLWKEHEQSQIDKNGESPQNVPALEIRIPAEHVTATNR 510

Query: 220 QAVESLRRRVTSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTESPQRMTVPYS 279
           Q                                                           
Sbjct: 511 Q----------------------------------------------------------- 565

Query: 280 RFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPLLVSASCSSFSPG 339
                                                                       
Sbjct: 571 ------------------------------------------------------------ 565

Query: 340 FHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 396
             VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC
Sbjct: 631 --VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 565

[Close]
BLAST of Spg026510 vs. ExPASy TrEMBL
Match: A0A6J1DZF3 (zinc finger CCCH domain-containing protein 13 OS=Momordica charantia OX=3673 GN=LOC111024931 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.4e-41
Identity = 110/236 (46.61%), Postives = 113/236 (47.88%), Query Frame = 0 

Query: 160 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNR 219
           LQGKPEVSSVVYKVGECMQELIKLWKE+ES+QIDK  ESSQNIPTLEIRIPAEHV+ATNR
Sbjct: 451 LQGKPEVSSVVYKVGECMQELIKLWKEYESAQIDKTGESSQNIPTLEIRIPAEHVSATNR 510

Query: 220 QAVESLRRRVTSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTESPQRMTVPYS 279
           Q                                                           
Sbjct: 511 Q----------------------------------------------------------- 565

Query: 280 RFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPLLVSASCSSFSPG 339
                                                                       
Sbjct: 571 ------------------------------------------------------------ 565

Query: 340 FHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 396
             VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC
Sbjct: 631 --VRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 565

[Close]
BLAST of Spg026510 vs. ExPASy TrEMBL
Match: A0A1S3CDT5 (uncharacterized protein LOC103499596 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499596 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-40
Identity = 111/236 (47.03%), Postives = 111/236 (47.03%), Query Frame = 0 

Query: 160 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNR 219
           LQGKPEVSSVVYKVGECMQELIKLWKEHE SQIDKN ESSQNIPTLEIRIPAEHV ATNR
Sbjct: 451 LQGKPEVSSVVYKVGECMQELIKLWKEHELSQIDKNGESSQNIPTLEIRIPAEHVIATNR 510

Query: 220 QAVESLRRRVTSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTESPQRMTVPYS 279
           Q                                                           
Sbjct: 511 Q----------------------------------------------------------- 565

Query: 280 RFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPLLVSASCSSFSPG 339
                                                                       
Sbjct: 571 ------------------------------------------------------------ 565

Query: 340 FHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQDC 396
             VRGGQLWGTDVYTYDSDLVAVLMHTGYCR TASPPPPAIQELRATIRVLPPQDC
Sbjct: 631 --VRGGQLWGTDVYTYDSDLVAVLMHTGYCRLTASPPPPAIQELRATIRVLPPQDC 565

[Close]
BLAST of Spg026510 vs. TAIR 10
Match: AT5G08450.1 (CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-33
Identity = 92/235 (39.15%), Postives = 101/235 (42.98%), Query Frame = 0 

Query: 160 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNR 219
           +QGK EVS VVYKVGECMQELIKLWKE++ S  DK+ + + N PTLE+RIPAEHVTATNR
Sbjct: 557 VQGKSEVSIVVYKVGECMQELIKLWKEYDLSHPDKSGDFANNGPTLEVRIPAEHVTATNR 616

Query: 220 QAVESLRRRVTSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTESPQRMTVPYS 279
           Q                                                           
Sbjct: 617 Q----------------------------------------------------------- 670

Query: 280 RFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPLLVSASCSSFSPG 339
                                                                       
Sbjct: 677 ------------------------------------------------------------ 670

Query: 340 FHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQD 395
             VRGGQLWGTD+YT DSDLVAVLMHTGYCRPTASPPPP +QELR TIRVLP QD
Sbjct: 737 --VRGGQLWGTDIYTDDSDLVAVLMHTGYCRPTASPPPPTMQELRTTIRVLPSQD 670

[Close]
BLAST of Spg026510 vs. TAIR 10
Match: AT5G08450.2 (CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-33
Identity = 92/235 (39.15%), Postives = 101/235 (42.98%), Query Frame = 0 

Query: 160 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNR 219
           +QGK EVS VVYKVGECMQELIKLWKE++ S  DK+ + + N PTLE+RIPAEHVTATNR
Sbjct: 557 VQGKSEVSIVVYKVGECMQELIKLWKEYDLSHPDKSGDFANNGPTLEVRIPAEHVTATNR 616

Query: 220 QAVESLRRRVTSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTESPQRMTVPYS 279
           Q                                                           
Sbjct: 617 Q----------------------------------------------------------- 670

Query: 280 RFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPLLVSASCSSFSPG 339
                                                                       
Sbjct: 677 ------------------------------------------------------------ 670

Query: 340 FHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQD 395
             VRGGQLWGTD+YT DSDLVAVLMHTGYCRPTASPPPP +QELR TIRVLP QD
Sbjct: 737 --VRGGQLWGTDIYTDDSDLVAVLMHTGYCRPTASPPPPTMQELRTTIRVLPSQD 670

[Close]
BLAST of Spg026510 vs. TAIR 10
Match: AT5G08450.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 34444 Blast hits to 20801 proteins in 1175 species: Archae - 64; Bacteria - 2390; Metazoa - 15568; Fungi - 3729; Plants - 1886; Viruses - 208; Other Eukaryotes - 10599 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-33
Identity = 92/235 (39.15%), Postives = 101/235 (42.98%), Query Frame = 0 

Query: 160 LQGKPEVSSVVYKVGECMQELIKLWKEHESSQIDKNSESSQNIPTLEIRIPAEHVTATNR 219
           +QGK EVS VVYKVGECMQELIKLWKE++ S  DK+ + + N PTLE+RIPAEHVTATNR
Sbjct: 557 VQGKSEVSIVVYKVGECMQELIKLWKEYDLSHPDKSGDFANNGPTLEVRIPAEHVTATNR 616

Query: 220 QAVESLRRRVTSLSNSWEFLLDSVDFRIPTSVTNLSLPSRLSSAVCKMTESPQRMTVPYS 279
           Q                                                           
Sbjct: 617 Q----------------------------------------------------------- 670

Query: 280 RFFQLPRPITFVGYPSCLAISVQAVCQTVAAFPGPHSFLYRVHPVVPLLVSASCSSFSPG 339
                                                                       
Sbjct: 677 ------------------------------------------------------------ 670

Query: 340 FHVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPPAIQELRATIRVLPPQD 395
             VRGGQLWGTD+YT DSDLVAVLMHTGYCRPTASPPPP +QELR TIRVLP QD
Sbjct: 737 --VRGGQLWGTDIYTDDSDLVAVLMHTGYCRPTASPPPPTMQELRTTIRVLPSQD 670

The following BLAST results are available for this feature:
BLAST of Spg026510 vs. NCBI nr
Match NameE-valueIdentityDescription
GFZ18702.13.0e-4548.22zinc finger CCCH domain protein [Actinidia rufa][more]
KAG5528690.12.6e-4448.73hypothetical protein RHGRI_029384 [Rhododendron griersonianum][more]
KAG6604709.11.2e-4147.03hypothetical protein SDJN03_02026, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022947594.11.2e-4147.03uncharacterized protein LOC111451415 [Cucurbita moschata] >XP_022947596.1 unchar... [more]
XP_023532462.11.2e-4147.03uncharacterized protein LOC111794622 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
BLAST of Spg026510 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0C2F61.9e-0533.33Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
BLAST of Spg026510 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7J0H6I61.5e-4548.22Zinc finger CCCH domain protein OS=Actinidia rufa OX=165716 GN=Acr_27g0004410 PE... [more]
A0A6J1G6W15.8e-4247.03uncharacterized protein LOC111451415 OS=Cucurbita moschata OX=3662 GN=LOC1114514... [more]
A0A6J1I0D22.2e-4146.61uncharacterized protein LOC111469718 OS=Cucurbita maxima OX=3661 GN=LOC111469718... [more]
A0A6J1DZF36.4e-4146.61zinc finger CCCH domain-containing protein 13 OS=Momordica charantia OX=3673 GN=... [more]
A0A1S3CDT51.4e-4047.03uncharacterized protein LOC103499596 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Spg026510 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G08450.11.3e-3339.15CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR0139... [more]
AT5G08450.21.3e-3339.15CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR0139... [more]
AT5G08450.31.3e-3339.15FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 30..108
e-value: 3.5E-12
score: 46.9
IPR013951Histone deacetylation protein Rxt3PFAMPF08642Rxt3coord: 345..370
e-value: 1.5E-8
score: 35.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg026510.1Spg026510.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016575 histone deacetylation