Spg026360 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAACATCGGCGGAGGCTGAAAATCAGCCCTGCCGTGAGCCATGAAAACCTTGTGTTGGAATGTTCGTGGTCTGGGGAATCCACGAACATTCAGAGCTGTAAGTGATGGTATTCGTCACTATAATCCTCAATTATTGTTTTTGCTTGAAACGAAGTGTAATTCCAATGCTTGGAGTTTAAATCGAATAAAAATGACCTTTAATTATTCGAGGTGTTTTATAGTGGATTGTAAAGGCAAAAGTGGGGGTTTATGCTTGTTGTGGAAGGACGAGATTGATGTTCACATTCGCTCATACACTTTCTTTCATATCGATGCCTCCATAAAGTGGGAATCTAAAATTTGGCGATTTACTGGTATATACAGTCACCCTCAAGCTTATCAGAGATATCATACATGGCAACTACTCAAATGCTTGCATAATCAAGATGATTCGGCTTGGGTCATTGGGGGTGATTTTAATGCCACATTGTTATATGAGGAGAAAGAAGGTGGAGTGCCAACTCGCGACTCTCGAATTGAGAATTTTCGTTCGATGATGGATGAATGTGGATTACAAGACTTAGACTTTGTGGGTGATTCCTTCACATGGTCTAATAGAAAATTGGATACAGGTCAGATCAACGAGAGATTAGATAGATTCATTGCCAACGAGGAGTTTTGTCAACTATTCCCACAACACACTGTGTCACGACCCGACTTCTTAATAAGTCTTTTCTGGACCGTTATGACAATGCATGCTTTGGAGACCTTTTTAAATAAAAATAATTTGAAACATAAATACTAATTTAAACAAAAACTTTAAAACAAAACTTTTATTCGGGATCCCTAAATTTTAAAAGTTTTAAATAATTTCTAAAATATAAATGTTCGTAGCCTCTAGAAAATTTCTCAAACAAATTTACAAATCAATAAAGTAAAACAGAGTTCTTAAAGCGGAAGAAAAATATGAAATTCAGGTCCTCTCATGGCTGTCTAACGGATTCTCATCAATCGCCTTTCACCTGCCCTTGCCTTTACCTGAAAAAAAAATATTTTTGAAAAGAATGAGTATTTTAAATACTCAGTAAGTAACCCTACTATTGAGGTTGGGTCACGCTTTAAAAACATTTTAAATGAAATCAACAACAAATATCTTTTTGGTGGCTCTAAACTTTATTCTAACGATATACATCAATTTCATGCATATCCTATACACATCAATTTCATGTGTCTCAGGCCGTCAATTTCACGAAACCTCGAGGTCGTCAATTTCACGAACCTCAACCTAGGTACATCAATTTCATGTCTCTAAGTCCTATGTAGGCATCTTTGAATGTACATCAATTTCATGTACACTTTATAAAACTCATAAATAATTCAAACTCATTCCTTTAATGGAATTTTGAACTCATTCCTTTAATGGAATTTTGAGAGACCACCAACTCAATTATTTCAGATATCAATAAATACAAAGCAATAATAATAAAGTTCATGCTTTCAACAATTTTTTTATAAACGCTTACGTAATTAAAATAATAGATTTTTCATGCACAATTTTCATACTTTTAACAATAATAATAAATTTCATGAACAACTCATAAGCATGAAAATTTTAGAAAAAAATCAAACACGCGCACCCAATTAAAAAGTTCAACAGTAAGTTCACTTACCTCAGCTTAACTACTCTAAACAGAACTAAATTAATTCTTTAACTCTAAGGTCCGTAACCACACAAAACAGAATGTCGCTTCTTGTTCGGGGTCTCAAATCCGCTCCAATCCTCCAATTGAATCACCAACACGCTACGGGCACCTTAAAATTGAGAGCTAAAATAATGGATATTTGATTAGGTAGTGAAATTTTCCCAAATAATCTTGAATCCCACTTACCCAATACTAAAATAGCCCGAAAAACATGCCAAAAATCGCTATTGCCCAAACACCCATCGTTGGAATCACGAAGAAGTTGCTGGACACCCTCTACTCGTCGGAAAAACTGCTAATACAGAGGAGAAGATGTCGGAAAACACCCACCGCGAGACCCACGCTCTTACCATCGGCTGAAACCGCGAGACCCACGCCAAACTGCCGCCTGCAACGCATCAGCTGCTGCACGCCACGGGTTGTTGTACTGTCGGAAGGGAAGCGCCACCGTGAGTCGCTGCTGGTCGGAGGAGCTGTTGAGGCGCGTCTCACCGCTATTAATACCGCAAGTGCACGAGTCGCAAGTAATATAAAACGGAAATATTCCGAGTATCGAATCCACAGGGAGGTGAAGCGAAAATTAAGCAAAGTAATAATTTCTTGAACACTAAAAATACTTGGGGGAAATAATATTTAGGGGCCAAAACATGAAATTAAAATGAATTTAAAATCAAAGCAATTAAAGACTTGAAATTGATCAGTCAAGGAAAATAAAATATGGAGAAAGAGTTTTTAGTGAGAAGCGGGGTCTTGAAAATCAATTAATAGCTAAATAATTATTACAATTAACCTATCTCATTGCCCGACTAATCATAATCCTAGAATCTCCGTTAGTCACATAGGATCTCCTGTCGGTTTTCCCTAATTATAATTAATCCATTTTAAGAACCTAAGTGTCCTTAGCGCCATTAAAAATCGTTAATTATTACGCTTTGATTCATTTTAGGAATCTAAGTTTAATCAACTAATCTCATTGTCACTATGGGCAATTAAACTAGTTGCATGGATTATGATCTATCCTAATTTCACTCCGTCGAGTTTCCATTGAGAATCAAATCAATATACAATTGGCCAGATTGCATACAGCATTACGAGCATCCATACAAATAATCAATAAGAGAGGGCAAGAGATAGGCAATTATAACAACATTTAACTATATATTTTCATTTCAAGACCCCAAATTGGGGTTTAGCTACACATAGCTAAAATATTCACAACATATACAATGCAAAGCATTAAATTGAGCAAAATAAAAGGAAAGGAAATGACCGTTGAAGACCCCGTCGCTAGCGCTTGGAGTCCCTCCGAGCACGTCTTGAGCCTCCTAGAGTGCTCCCCAAAACTCTCCAAAATTTCCCACTAAGAACTCTCAAAAAGGCTAAGAAGCCTTGAGAGAAGGCTCCAAATGAGCCAAGGAAAGAAAGGAATGAAAGGATTGAATGATGATTGATGCATAAAATGGGCACCAAGGGGCGCCTTATATAGGCCTGGAAATAGGACAGCGTCGCGACGCTGTGACGTCACTCAACTTGCTGGCCAAGAAATGGGACAGCGTCGCGATGCTGTCCCCACAACGTCTCGACGCTGTGCGGTTTTCAGACCAGGCTGGCGCGGGTTGGGCTTGAAATTGGGCCTTCCTTCATTTCTTTTTGGATCATCTTTAAATGGTTGACTTTTTGGGCTTCCCCTTGACCCATGCATGGAAATTTGGGCTTGGATGGCTCATTTTAGTGCATTTTTCACCAAAAATCCATAATTTGCTCCTAAAGACCAAATAACAAAATATTTTAGATTTCTTTAATAAAAACACAATTAAAACGCCTAAAAGCTTGATAATTTAGGACTAAAATAGCGACATTTCTGCCTGCTATCAGGAGCTCGCCGGAGAGACGAGATCGCCGCCTGAAGATCGCCTGAAGCCGCGCGTGAAACCCGAACCAAGGCGCCGCCGCCTCTTGCCGTCGCTGCTTGCTGTTGCCAGAGGGACCACGCTGCCGGAGCAAGAGGAAGAAGAGCCGCCGGAATAA ATGATGAAACATCGGCGGAGGCTGAAAATCAGCCCTGCCGTGAGCCATGAAAACCTTGTGTTGGAATGTTCGTGGTCTGGGGAATCCACGAACATTCAGAGCTTGGATTGTAAAGGCAAAAGTGGGGGTTTATGCTTGTTGTGGAAGGACGAGATTGATGTTCACATTCGCTCATACACTTTCTTTCATATCGATGCCTCCATAAAGTGGGAATCTAAAATTTGGCGATTTACTGGTATATACAGTCACCCTCAAGCTTATCAGAGATATCATACATGGCAACTACTCAAATGCTTGCATAATCAAGATGATTCGGCTTGGGTCATTGGGGGTGATTTTAATGCCACATTGTTATATGAGGAGAAAGAAGGTGGAGTGCCAACTCGCGACTCTCGAATTGAGAATTTTCGTTCGATGATGGATGAATGTGGATTACAAGACTTAGACTTTGTGGGTGATTCCTTCACATGGTCTAATAGAAAATTGGATACAGGGAAGCGCCACCGTGAGTCGCTGCTGGTCGGAGGAGCTGTTGAGGCGCGTCTCACCGCTATTAATACCGCAAGTGCACGAGTCGCAAGCCTGGAAATAGGACAGCGTCGCGACGCTGTGACGTCACTCAACTTGCTGGCCAAGAAATGGGACAGCGTCGCGATGCTGTCCCCACAACGTCTCGACGCTGAGCTCGCCGGAGAGACGAGATCGCCGCCTGAAGATCGCCTGAAGCCGCGCGTGAAACCCGAACCAAGGCGCCGCCGCCTCTTGCCGTCGCTGCTTGCTGTTGCCAGAGGGACCACGCTGCCGGAGCAAGAGGAAGAAGAGCCGCCGGAATAA ATGATGAAACATCGGCGGAGGCTGAAAATCAGCCCTGCCGTGAGCCATGAAAACCTTGTGTTGGAATGTTCGTGGTCTGGGGAATCCACGAACATTCAGAGCTTGGATTGTAAAGGCAAAAGTGGGGGTTTATGCTTGTTGTGGAAGGACGAGATTGATGTTCACATTCGCTCATACACTTTCTTTCATATCGATGCCTCCATAAAGTGGGAATCTAAAATTTGGCGATTTACTGGTATATACAGTCACCCTCAAGCTTATCAGAGATATCATACATGGCAACTACTCAAATGCTTGCATAATCAAGATGATTCGGCTTGGGTCATTGGGGGTGATTTTAATGCCACATTGTTATATGAGGAGAAAGAAGGTGGAGTGCCAACTCGCGACTCTCGAATTGAGAATTTTCGTTCGATGATGGATGAATGTGGATTACAAGACTTAGACTTTGTGGGTGATTCCTTCACATGGTCTAATAGAAAATTGGATACAGGGAAGCGCCACCGTGAGTCGCTGCTGGTCGGAGGAGCTGTTGAGGCGCGTCTCACCGCTATTAATACCGCAAGTGCACGAGTCGCAAGCCTGGAAATAGGACAGCGTCGCGACGCTGTGACGTCACTCAACTTGCTGGCCAAGAAATGGGACAGCGTCGCGATGCTGTCCCCACAACGTCTCGACGCTGAGCTCGCCGGAGAGACGAGATCGCCGCCTGAAGATCGCCTGAAGCCGCGCGTGAAACCCGAACCAAGGCGCCGCCGCCTCTTGCCGTCGCTGCTTGCTGTTGCCAGAGGGACCACGCTGCCGGAGCAAGAGGAAGAAGAGCCGCCGGAATAA MMKHRRRLKISPAVSHENLVLECSWSGESTNIQSLDCKGKSGGLCLLWKDEIDVHIRSYTFFHIDASIKWESKIWRFTGIYSHPQAYQRYHTWQLLKCLHNQDDSAWVIGGDFNATLLYEEKEGGVPTRDSRIENFRSMMDECGLQDLDFVGDSFTWSNRKLDTGKRHRESLLVGGAVEARLTAINTASARVASLEIGQRRDAVTSLNLLAKKWDSVAMLSPQRLDAELAGETRSPPEDRLKPRVKPEPRRRRLLPSLLAVARGTTLPEQEEEEPPE Homology
BLAST of Spg026360 vs. NCBI nr
Match: KAF5449841.1 (hypothetical protein F2P56_030246 [Juglans regia]) HSP 1 Score: 144.8 bits (364), Expect = 1.1e-30 Identity = 68/139 (48.92%), Postives = 88/139 (63.31%), Query Frame = 0
BLAST of Spg026360 vs. NCBI nr
Match: KAG2711776.1 (hypothetical protein I3760_04G092800 [Carya illinoinensis]) HSP 1 Score: 142.9 bits (359), Expect = 4.2e-30 Identity = 73/166 (43.98%), Postives = 105/166 (63.25%), Query Frame = 0
BLAST of Spg026360 vs. NCBI nr
Match: KAF5443558.1 (hypothetical protein F2P56_036105, partial [Juglans regia]) HSP 1 Score: 136.3 bits (342), Expect = 3.9e-28 Identity = 59/138 (42.75%), Postives = 91/138 (65.94%), Query Frame = 0
BLAST of Spg026360 vs. NCBI nr
Match: TXG69190.1 (hypothetical protein EZV62_004125 [Acer yangbiense]) HSP 1 Score: 136.3 bits (342), Expect = 3.9e-28 Identity = 62/128 (48.44%), Postives = 80/128 (62.50%), Query Frame = 0
BLAST of Spg026360 vs. NCBI nr
Match: XP_021304035.1 (uncharacterized protein LOC110430565 [Sorghum bicolor]) HSP 1 Score: 135.2 bits (339), Expect = 8.7e-28 Identity = 60/136 (44.12%), Postives = 85/136 (62.50%), Query Frame = 0
BLAST of Spg026360 vs. ExPASy TrEMBL
Match: A0A2N9FVE9 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18646 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 2.6e-30 Identity = 70/163 (42.94%), Postives = 100/163 (61.35%), Query Frame = 0
BLAST of Spg026360 vs. ExPASy TrEMBL
Match: A0A2N9E8U7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3279 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.1e-28 Identity = 68/163 (41.72%), Postives = 99/163 (60.74%), Query Frame = 0
BLAST of Spg026360 vs. ExPASy TrEMBL
Match: A0A5C7IIT4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 1.9e-28 Identity = 62/128 (48.44%), Postives = 80/128 (62.50%), Query Frame = 0
BLAST of Spg026360 vs. ExPASy TrEMBL
Match: A0A2N9F6W6 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10717 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 2.5e-28 Identity = 66/163 (40.49%), Postives = 100/163 (61.35%), Query Frame = 0
BLAST of Spg026360 vs. ExPASy TrEMBL
Match: A0A5B6U728 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_009241 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.6e-27 Identity = 64/176 (36.36%), Postives = 96/176 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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