Spg025979 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025979
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription factor TCP15-like
Location	scaffold7: 2376143 .. 2378726 (-)
RNA-Seq Expression	Spg025979
Synteny	Spg025979

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAGAGGTGGCTCAGAGAAAAGCCCACTTTGGGTATGGCTCAAAAGTAAAGAGAGAAATTTTAAAAAAAGAATTTGAACCAAAAAAATAAAATAAAAAAAAAAAAAAAAAAAAAAAGCTATAGGATTATCCTGTCCCATCCCCTTTTGATTCTACTGCATGCACTTTGTTTGATTCCCAAACAATGTTACTGCCACTTGTTAATATATATGAATGAGGAAATATACTCTCAAAACTTTATATCAACTTAAACTTTTAGGTCGAGTCAGTCGTATTTGAATGATGTTCGAGTAGACTAATAGAAGATAAAAAATGAAAAGGTAATCTTGTTCAAAACTTTAATTATGTGAATCGTTTTCTCTACCAAATATTTCTTACTTCTTCGCACGCTTTGAAGTGCAAGATTCTTCACATGTGTTATTTTTATTTAAATTAAATTAATATGTAAACTCACAAATTAGGATCACAAAAAGAGCTTAAATGATTAGATATGTGTGGTGATTTAACTTGACATATGAATATGAGGGTGAGTGTGGACATATTTTTGTAACAGTTTGGGTGCAAAACAACAGTTAAAAAGAAAAGGGTTTGAATGAGTGATATACATGTTTTTTGGGGATCAGAAAAAGGAGAAGGGGGAAGGGGCGGAATTTCGAGAAAGCTGAAGCCCTGGAGAGGCAAAGTGAAAAGGGGAAAAGGGTGTCAAACGCAAATTACGTCAATGATGATAGGAATGATATGGGAGCCACATGCATCATGTTATATATTTTTATATATATATATATAATTCATGATCTTCCTTTTACCAGTCAGTCTCTCTCTATTATTATTATTTTTTGACTTGGCTGTTTGGGACCCACCCCACTATATCTTTATGCCTTCAAAATTAACATCTCAAAAAAAAAAAAAAAAAAAAAAAAACTTTGAATCATTCCAGAGTTCATCCACAATTAACAAACACCCACACACACACATACCTAATCCCCCTAATCCTTTTCAATTACACAACACTAAAAAAGTCCACATATATTCAGACAAAACCCTAATTTCAGACCCTCTTTTTTTCTTTTTTTTTTTGGAATGAAAAAGAAAAAATTCTTGATTTGGGTTTCAGAAATCCCACTCATTATTTTTGTTGCTTAAAGCTTGCCCACTTCCCTTATCTTCTCTCTCTCTTTCTTTCTTTCTTTCTCTCTTGTGGATCAAAAGGAGAAAACTTTGAGACACACACACACACACAGCTGCCAACTCCCATCTGAAAGGAATTCCAATTCCATGCTGCTCCACAAATATATGAGAGAGAGAAGAAAGAAAGAGACCCACTAGGCCACTATGTGATACGCTCCAAGGGTCACCTACAGATGTACTGCTAGCAAAAGGAAAAGGGTTTACGTTTATTTGGCCTTCCAAAAAAAAAAAAAAGAAAAAAAGAGACAAGAGTCTACACATATGATCATGGATGGTGAAAATGGGATCCGAAGACCTAATTTTCCATTACAATTGTTGGAGAAAAAAGAAGAGCAACACCACCACCGCCAACAACAGCCTTGTTCCACCTCCGCAAACAACGGAACAACAACTACAACAACAGCAACAACTCCCACATCCACAACTGCAAATCCAAATCCAAATCTTCAATCTTCTTCTCCCAAGAAGCCGACACCCAAAAGGGCCACCACCAAAGACCGCCACACAAAAGTCGATGGCCGTGGCCGCCGGATTCGGATGCCGGCCCTTTGTGCCGCCAGGGTTTTTCAGCTCACTAGAGAGCTTGGCCACAAGTCCGACGGCGAAACCATCGAGTGGCTCCTCCAGCAGGCCGAGCCCGCTGTTATTGCAGCCACCGGCACCGGTACAATTCCGGCTAATTTCACCTCGCTTAATATCTCTCTCCGTAGCTCCGGCTCCACCATCTCCGCCCCTTCCCACTTGCGGACCAGCTATTTCAGTCCGACCCAATTCGCTGTTAGAACAAGATCCGATCTTTGGGACAGAAATAATAATCTAGTCGATGATTCCTCTACATTCTTGAATTTCAACTCTCCTAATTACGTCAACGCGTTCAAGCACGATCAGGGAGGGATTGATGTCACCGACGCCGGGAAAAAACGGCGGCCAGAGCAGTCGGAATCGTCGTCGGAGAATCCGGTGGGGAATTATTTGGTTCAATCGAGTACTGGGTCGATTCCGGCGAGTCACAGCACGCCGGCGCCGGCGACATTTTGGATGGTGACGAATCCGAGTAATCCAGCGAGTGATCCGATGTGGACATTTCCGTCGGTGAGCAACAGCAGCATGTTCAGAGGGGCGCCCGTGGCCGCCGCTGGCGGCGGCGGGTTTCATTTCATGAATCTCCCACCACCAATGGCTCTTTTACCAAGCGCCCAACAATTGAGCTCCGGGATCGGAAGCGGCGGCGGTCCGGCGACCGACACTCACTTGGGGATGTTGGCGGCTTTGAGTGCTTATAGAACGATGCCGGGATTGTCAGTTTCTGAATCTCCAACAAGAGGAGTGGCGGCTGTTCATCAAGGTGGAAATGAGGCTCATGATTCCACTTCTAATCGTGATCAATCATAG

mRNA sequence

ATGGTGGAGAGGTGGCTCAGAGAAAAGCCCACTTTGGGTATGGCTCAAAAAAAAAGGAGAAGGGGGAAGGGGCGGAATTTCGAGAAAGCTGAAGCCCTGGAGAGGCAAAGTGAAAAGGGGAAAAGGGTGTCAAACGCAAATTACGTCAATGATGATAGGAATGATATGGGAGCCACATGCATCATCTCCGGCTCCACCATCTCCGCCCCTTCCCACTTGCGGACCAGCTATTTCAGTCCGACCCAATTCGCTGTTAGAACAAGATCCGATCTTTGGGACAGAAATAATAATCTAGTCGATGATTCCTCTACATTCTTGAATTTCAACTCTCCTAATTACGTCAACGCGTTCAAGCACGATCAGGGAGGGATTGATGTCACCGACGCCGGGAAAAAACGGCGGCCAGAGCAGTCGGAATCGTCGTCGGAGAATCCGGTGGGGAATTATTTGGTTCAATCGAGTACTGGGTCGATTCCGGCGAGTCACAGCACGCCGGCGCCGGCGACATTTTGGATGGTGACGAATCCGAGTAATCCAGCGAGTGATCCGATGTGGACATTTCCGTCGGTGAGCAACAGCAGCATGTTCAGAGGGGCGCCCGTGGCCGCCGCTGGCGGCGGCGGGTTTCATTTCATGAATCTCCCACCACCAATGGCTCTTTTACCAAGCGCCCAACAATTGAGCTCCGGGATCGGAAGCGGCGGCGGTCCGGCGACCGACACTCACTTGGGGATGTTGGCGGCTTTGAGTGCTTATAGAACGATGCCGGGATTGTCAGTTTCTGAATCTCCAACAAGAGGAGTGGCGGCTGTTCATCAAGGTGGAAATGAGGCTCATGATTCCACTTCTAATCGTGATCAATCATAG

Coding sequence (CDS)

ATGGTGGAGAGGTGGCTCAGAGAAAAGCCCACTTTGGGTATGGCTCAAAAAAAAAGGAGAAGGGGGAAGGGGCGGAATTTCGAGAAAGCTGAAGCCCTGGAGAGGCAAAGTGAAAAGGGGAAAAGGGTGTCAAACGCAAATTACGTCAATGATGATAGGAATGATATGGGAGCCACATGCATCATCTCCGGCTCCACCATCTCCGCCCCTTCCCACTTGCGGACCAGCTATTTCAGTCCGACCCAATTCGCTGTTAGAACAAGATCCGATCTTTGGGACAGAAATAATAATCTAGTCGATGATTCCTCTACATTCTTGAATTTCAACTCTCCTAATTACGTCAACGCGTTCAAGCACGATCAGGGAGGGATTGATGTCACCGACGCCGGGAAAAAACGGCGGCCAGAGCAGTCGGAATCGTCGTCGGAGAATCCGGTGGGGAATTATTTGGTTCAATCGAGTACTGGGTCGATTCCGGCGAGTCACAGCACGCCGGCGCCGGCGACATTTTGGATGGTGACGAATCCGAGTAATCCAGCGAGTGATCCGATGTGGACATTTCCGTCGGTGAGCAACAGCAGCATGTTCAGAGGGGCGCCCGTGGCCGCCGCTGGCGGCGGCGGGTTTCATTTCATGAATCTCCCACCACCAATGGCTCTTTTACCAAGCGCCCAACAATTGAGCTCCGGGATCGGAAGCGGCGGCGGTCCGGCGACCGACACTCACTTGGGGATGTTGGCGGCTTTGAGTGCTTATAGAACGATGCCGGGATTGTCAGTTTCTGAATCTCCAACAAGAGGAGTGGCGGCTGTTCATCAAGGTGGAAATGAGGCTCATGATTCCACTTCTAATCGTGATCAATCATAG

Protein sequence

MVERWLREKPTLGMAQKKRRRGKGRNFEKAEALERQSEKGKRVSNANYVNDDRNDMGATCIISGSTISAPSHLRTSYFSPTQFAVRTRSDLWDRNNNLVDDSSTFLNFNSPNYVNAFKHDQGGIDVTDAGKKRRPEQSESSSENPVGNYLVQSSTGSIPASHSTPAPATFWMVTNPSNPASDPMWTFPSVSNSSMFRGAPVAAAGGGGFHFMNLPPPMALLPSAQQLSSGIGSGGGPATDTHLGMLAALSAYRTMPGLSVSESPTRGVAAVHQGGNEAHDSTSNRDQS

Homology

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BLAST of Spg025979 vs. NCBI nr
Match: XP_022987562.1 (transcription factor TCP15-like [Cucurbita maxima])

HSP 1 Score: 395.2 bits (1014), Expect = 4.8e-106
Identity = 203/234 (86.75%), Postives = 210/234 (89.74%), Query Frame = 0


Query: 63  SGSTISAPSHLRTSYFSPTQFAVRTRSDLWDRNNN-------LVDDSSTFLNFNSPNYVN 122
           SGSTI APSHLRTSYFSPTQFAVRTRSDLWDR+NN       LVDDSSTFLNFNSPNY+N
Sbjct: 158 SGSTILAPSHLRTSYFSPTQFAVRTRSDLWDRSNNNNNNNNTLVDDSSTFLNFNSPNYIN 217

Query: 123 AFKHDQGGIDVTDAGKKRRPEQSESSSENPVGNYLVQSSTGSIPASHSTPAPATFWMVTN 182
           AFKHDQGGIDVTDAGKKRRPE SESSSENPVGNYLVQSSTGSIPA HSTP PATFWMVTN
Sbjct: 218 AFKHDQGGIDVTDAGKKRRPEHSESSSENPVGNYLVQSSTGSIPAGHSTPVPATFWMVTN 277

Query: 183 PSNPASDPMWTFPSVSNSSMFRGAPVAAAGGGGFHFMNLPPPMALLPSAQQLSSGIGSG- 242
           PSN ASDPMWTFPSVSNSSMFRG      GGGGFHFMNLPPPMALLP+ QQ+ SGIG G 
Sbjct: 278 PSNQASDPMWTFPSVSNSSMFRGGS-GGGGGGGFHFMNLPPPMALLPTGQQVGSGIGGGS 337

Query: 243 GGPATDTHLGMLAALSAYRTMPGLSVSESPTRGVAAVHQGGNEAHDSTSNRDQS 289
           GGPATDTHLGMLAALSAYRT+PG+S+SESPTRG A VHQGGNEAHDSTSNRDQS
Sbjct: 338 GGPATDTHLGMLAALSAYRTIPGVSISESPTRGAAGVHQGGNEAHDSTSNRDQS 390

[Close]

BLAST of Spg025979 vs. NCBI nr
Match: KAG6601425.1 (Transcription factor TCP15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 392.1 bits (1006), Expect = 4.1e-105
Identity = 203/243 (83.54%), Postives = 211/243 (86.83%), Query Frame = 0


Query: 63  SGSTISAPSHLRTSYFSPTQFAVRTRSDLWDRNNN--------------LVDDSSTFLNF 122
           SGST+ APSHLRTSYFSPTQFAVRTRSDLWDR+NN              LVDDSSTF NF
Sbjct: 142 SGSTVLAPSHLRTSYFSPTQFAVRTRSDLWDRSNNNNNHNHNHNNNNNTLVDDSSTFFNF 201

Query: 123 NSPNYVNAFKHDQGGIDVTDAGKKRRPEQSESSSENPVGNYLVQSSTGSIPASHSTPAPA 182
           NSPNY+NAFKHDQGGIDVTDAGKKRRPE SESSSENPVGNYLVQSSTGSIPASHSTP PA
Sbjct: 202 NSPNYINAFKHDQGGIDVTDAGKKRRPENSESSSENPVGNYLVQSSTGSIPASHSTPVPA 261

Query: 183 TFWMVTNPSNPASDPMWTFPSVSNSSMFRGAP--VAAAGGGGFHFMNLPPPMALLPSAQQ 242
           TFWMVTNPSN ASDPMWTFPSVSNSSMFRG        GGGGFHFMNLPPPMALLP+ QQ
Sbjct: 262 TFWMVTNPSNQASDPMWTFPSVSNSSMFRGGSGGGGGGGGGGFHFMNLPPPMALLPTGQQ 321

Query: 243 LSSGIGSG-GGPATDTHLGMLAALSAYRTMPGLSVSESPTRGVAAVHQGGNEAHDSTSNR 289
           + SGIG G GGPATDTHLGMLAALSAYRT+PG+S+SESPTRG AAVHQGGNEAHDSTSNR
Sbjct: 322 VGSGIGGGSGGPATDTHLGMLAALSAYRTIPGVSISESPTRGAAAVHQGGNEAHDSTSNR 381

[Close]

BLAST of Spg025979 vs. NCBI nr
Match: KAG7032208.1 (Transcription factor TCP15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 390.6 bits (1002), Expect = 1.2e-104
Identity = 202/241 (83.82%), Postives = 210/241 (87.14%), Query Frame = 0


Query: 63  SGSTISAPSHLRTSYFSPTQFAVRTRSDLWDRNNN------------LVDDSSTFLNFNS 122
           SGST+ APSHLRTSYFSPTQFAVRTRSDLWDR+NN            LVDDSSTF NFNS
Sbjct: 139 SGSTVLAPSHLRTSYFSPTQFAVRTRSDLWDRSNNNNNHNHNNNNNTLVDDSSTFFNFNS 198

Query: 123 PNYVNAFKHDQGGIDVTDAGKKRRPEQSESSSENPVGNYLVQSSTGSIPASHSTPAPATF 182
           PNY+NAFKHDQGGIDVTDAGKKRRPE SESSSENPVGNYLVQSSTGSIPASHSTP PATF
Sbjct: 199 PNYINAFKHDQGGIDVTDAGKKRRPENSESSSENPVGNYLVQSSTGSIPASHSTPVPATF 258

Query: 183 WMVTNPSNPASDPMWTFPSVSNSSMFRGAP--VAAAGGGGFHFMNLPPPMALLPSAQQLS 242
           WMVTNPSN ASDPMWTFPSVSNSSMFRG        GGGGFHFMNLPPPMALLP+ QQ+ 
Sbjct: 259 WMVTNPSNQASDPMWTFPSVSNSSMFRGGSGGGGGGGGGGFHFMNLPPPMALLPTGQQVG 318

Query: 243 SGIGSG-GGPATDTHLGMLAALSAYRTMPGLSVSESPTRGVAAVHQGGNEAHDSTSNRDQ 289
           SGIG G GGPATDTHLGMLAALSAYRT+PG+S+SESPTRG AAVH GGNEAHDSTSNRDQ
Sbjct: 319 SGIGGGSGGPATDTHLGMLAALSAYRTIPGVSISESPTRGAAAVHPGGNEAHDSTSNRDQ 378

[Close]

BLAST of Spg025979 vs. NCBI nr
Match: XP_023552809.1 (transcription factor TCP15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 390.2 bits (1001), Expect = 1.6e-104
Identity = 202/245 (82.45%), Postives = 211/245 (86.12%), Query Frame = 0


Query: 63  SGSTISAPSHLRTSYFSPTQFAVRTRSDLWDRNNN----------------LVDDSSTFL 122
           SGST+ APSHLRTSYFSPTQFAVRTRSDLWDR+NN                LVDDSSTFL
Sbjct: 142 SGSTVLAPSHLRTSYFSPTQFAVRTRSDLWDRSNNNNNNNNNHNNNNNNNTLVDDSSTFL 201

Query: 123 NFNSPNYVNAFKHDQGGIDVTDAGKKRRPEQSESSSENPVGNYLVQSSTGSIPASHSTPA 182
           NFNSPNY+NAFKHDQGGIDVTDAGKKRRPE SESSSENPVGNYL+QSSTGSIPASHSTP 
Sbjct: 202 NFNSPNYINAFKHDQGGIDVTDAGKKRRPENSESSSENPVGNYLIQSSTGSIPASHSTPV 261

Query: 183 PATFWMVTNPSNPASDPMWTFPSVSNSSMFRGAP--VAAAGGGGFHFMNLPPPMALLPSA 242
           PATFWMVTNPSN ASDPMWTFPSVSNSSMFRG        GGGGFHFMNLPPPMALLP+ 
Sbjct: 262 PATFWMVTNPSNQASDPMWTFPSVSNSSMFRGGSGGGGGGGGGGFHFMNLPPPMALLPTG 321

Query: 243 QQLSSGIGSGGG-PATDTHLGMLAALSAYRTMPGLSVSESPTRGVAAVHQGGNEAHDSTS 289
           QQ+ SGIG G G PATDTHLGMLAALSAYRT+PG+S+SESPTRG AAVHQGGNEAHDSTS
Sbjct: 322 QQVGSGIGGGSGVPATDTHLGMLAALSAYRTIPGVSISESPTRGAAAVHQGGNEAHDSTS 381

[Close]

BLAST of Spg025979 vs. NCBI nr
Match: XP_022957555.1 (transcription factor TCP15-like [Cucurbita moschata])

HSP 1 Score: 389.0 bits (998), Expect = 3.5e-104
Identity = 201/241 (83.40%), Postives = 210/241 (87.14%), Query Frame = 0


Query: 63  SGSTISAPSHLRTSYFSPTQFAVRTRSDLWDRNNN------------LVDDSSTFLNFNS 122
           SGST+ APSHLRTSYFSPTQFAVRTRSDLWDR+NN            LVDDSSTF NFNS
Sbjct: 136 SGSTVLAPSHLRTSYFSPTQFAVRTRSDLWDRSNNNNNHNHNNNNNTLVDDSSTFFNFNS 195

Query: 123 PNYVNAFKHDQGGIDVTDAGKKRRPEQSESSSENPVGNYLVQSSTGSIPASHSTPAPATF 182
           PNY+NAFKHDQGGIDVTDAGKKRRPE SESSSENPVGNYLVQSSTGSIPASHSTP PATF
Sbjct: 196 PNYINAFKHDQGGIDVTDAGKKRRPENSESSSENPVGNYLVQSSTGSIPASHSTPVPATF 255

Query: 183 WMVTNPSNPASDPMWTFPSVSNSSMFRGAP--VAAAGGGGFHFMNLPPPMALLPSAQQLS 242
           WMVTNPSN ASDPMWTFPSVSNSSMFRG        GGGGFHFMNLPPPMALLP+ QQ+ 
Sbjct: 256 WMVTNPSNQASDPMWTFPSVSNSSMFRGGSGGGGGGGGGGFHFMNLPPPMALLPTGQQVG 315

Query: 243 SGIGSGGG-PATDTHLGMLAALSAYRTMPGLSVSESPTRGVAAVHQGGNEAHDSTSNRDQ 289
           SGIG G G PATDTHLGMLAALSAYRT+PG+S+SESPTRG AAVH+GGNEAHDSTSNRDQ
Sbjct: 316 SGIGGGSGCPATDTHLGMLAALSAYRTIPGVSISESPTRGAAAVHRGGNEAHDSTSNRDQ 375

[Close]

BLAST of Spg025979 vs. ExPASy Swiss-Prot
Match: Q9C9L2 (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.0e-09
Identity = 58/166 (34.94%), Postives = 79/166 (47.59%), Query Frame = 0


Query: 131 KKRRPEQSESSSE----NPVGNYLVQSSTGSIPASHSTPAPATFWMVTNPSNPASDPMWT 190
           K      S SSS+    N +GNYLVQS+ GS+P S S PA A FW     S   +  +W 
Sbjct: 164 KNESHSSSSSSSQLLDHNQMGNYLVQSTAGSLPTSQS-PATAPFW----SSGDNTQNLWA 223

Query: 191 F------PSVSNSSMFRGAPVAAAGGGGFHFMNLPPPMALLPSAQQLSSGIGSGGGPATD 250
           F        V    ++      + GG G H MN   P+AL  S Q L+SG G GGG   +
Sbjct: 224 FNINPHHSGVVAGDVYNPNSGGSGGGSGVHLMNFAAPIALF-SGQPLASGYGGGGGGGGE 283

Query: 251 -THLGMLAAL-SAYRTMPGLSVSESPTRGVAAVHQGGNEAHDSTSN 285
            +H G+LAAL +AYR +       +  +     H   ++   STS+
Sbjct: 284 HSHYGVLAALNAAYRPVAETGNHNNNQQNRDGDHHHNHQEDGSTSH 323

[Close]

BLAST of Spg025979 vs. ExPASy TrEMBL
Match: A0A6J1JAP9 (transcription factor TCP15-like OS=Cucurbita maxima OX=3661 GN=LOC111485089 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.3e-106
Identity = 203/234 (86.75%), Postives = 210/234 (89.74%), Query Frame = 0


Query: 63  SGSTISAPSHLRTSYFSPTQFAVRTRSDLWDRNNN-------LVDDSSTFLNFNSPNYVN 122
           SGSTI APSHLRTSYFSPTQFAVRTRSDLWDR+NN       LVDDSSTFLNFNSPNY+N
Sbjct: 158 SGSTILAPSHLRTSYFSPTQFAVRTRSDLWDRSNNNNNNNNTLVDDSSTFLNFNSPNYIN 217

Query: 123 AFKHDQGGIDVTDAGKKRRPEQSESSSENPVGNYLVQSSTGSIPASHSTPAPATFWMVTN 182
           AFKHDQGGIDVTDAGKKRRPE SESSSENPVGNYLVQSSTGSIPA HSTP PATFWMVTN
Sbjct: 218 AFKHDQGGIDVTDAGKKRRPEHSESSSENPVGNYLVQSSTGSIPAGHSTPVPATFWMVTN 277

Query: 183 PSNPASDPMWTFPSVSNSSMFRGAPVAAAGGGGFHFMNLPPPMALLPSAQQLSSGIGSG- 242
           PSN ASDPMWTFPSVSNSSMFRG      GGGGFHFMNLPPPMALLP+ QQ+ SGIG G 
Sbjct: 278 PSNQASDPMWTFPSVSNSSMFRGGS-GGGGGGGFHFMNLPPPMALLPTGQQVGSGIGGGS 337

Query: 243 GGPATDTHLGMLAALSAYRTMPGLSVSESPTRGVAAVHQGGNEAHDSTSNRDQS 289
           GGPATDTHLGMLAALSAYRT+PG+S+SESPTRG A VHQGGNEAHDSTSNRDQS
Sbjct: 338 GGPATDTHLGMLAALSAYRTIPGVSISESPTRGAAGVHQGGNEAHDSTSNRDQS 390

[Close]

BLAST of Spg025979 vs. ExPASy TrEMBL
Match: A0A6J1H0W2 (transcription factor TCP15-like OS=Cucurbita moschata OX=3662 GN=LOC111458919 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.7e-104
Identity = 201/241 (83.40%), Postives = 210/241 (87.14%), Query Frame = 0


Query: 63  SGSTISAPSHLRTSYFSPTQFAVRTRSDLWDRNNN------------LVDDSSTFLNFNS 122
           SGST+ APSHLRTSYFSPTQFAVRTRSDLWDR+NN            LVDDSSTF NFNS
Sbjct: 136 SGSTVLAPSHLRTSYFSPTQFAVRTRSDLWDRSNNNNNHNHNNNNNTLVDDSSTFFNFNS 195

Query: 123 PNYVNAFKHDQGGIDVTDAGKKRRPEQSESSSENPVGNYLVQSSTGSIPASHSTPAPATF 182
           PNY+NAFKHDQGGIDVTDAGKKRRPE SESSSENPVGNYLVQSSTGSIPASHSTP PATF
Sbjct: 196 PNYINAFKHDQGGIDVTDAGKKRRPENSESSSENPVGNYLVQSSTGSIPASHSTPVPATF 255

Query: 183 WMVTNPSNPASDPMWTFPSVSNSSMFRGAP--VAAAGGGGFHFMNLPPPMALLPSAQQLS 242
           WMVTNPSN ASDPMWTFPSVSNSSMFRG        GGGGFHFMNLPPPMALLP+ QQ+ 
Sbjct: 256 WMVTNPSNQASDPMWTFPSVSNSSMFRGGSGGGGGGGGGGFHFMNLPPPMALLPTGQQVG 315

Query: 243 SGIGSGGG-PATDTHLGMLAALSAYRTMPGLSVSESPTRGVAAVHQGGNEAHDSTSNRDQ 289
           SGIG G G PATDTHLGMLAALSAYRT+PG+S+SESPTRG AAVH+GGNEAHDSTSNRDQ
Sbjct: 316 SGIGGGSGCPATDTHLGMLAALSAYRTIPGVSISESPTRGAAAVHRGGNEAHDSTSNRDQ 375

[Close]

BLAST of Spg025979 vs. ExPASy TrEMBL
Match: A0A6J1HSI7 (transcription factor TCP15-like OS=Cucurbita maxima OX=3661 GN=LOC111467418 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.7e-104
Identity = 199/227 (87.67%), Postives = 211/227 (92.95%), Query Frame = 0


Query: 63  SGSTISAPSHLRTSYFSPTQFAVRTRSDLWDRNNNLVDDSSTFLNFNSPNYVNAFKHDQG 122
           SGSTISAPSH RTSYF+PTQFAVRTRSDLWDR+N+LVDDSSTFLNFNSPNYV   KHDQG
Sbjct: 135 SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNSLVDDSSTFLNFNSPNYV---KHDQG 194

Query: 123 GIDVTDAGKKRRPEQSESSSENPVGNYLVQSSTGSIPASHSTPAPATFWMVTNPSNPASD 182
           GID+T+AGKKRRPEQSESSSENP+GNYLVQS++GSIPASH T  P TFWM+TNPSNPASD
Sbjct: 195 GIDLTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASD 254

Query: 183 PMWTFPSVSNSSMFRGAPVAAAGGGGFHFMNLPPPMALLPSAQQLSSGI-GSGGGPATDT 242
           PMWTFPS+S+SSMFRGA  AA G GGFHFMNLPPPMALLP+AQ L SGI GSGGGPATDT
Sbjct: 255 PMWTFPSMSSSSMFRGA-AAAGGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDT 314

Query: 243 HLGMLAALSAYRTMPGLSVSESPTRGVAAVHQGGNEAHDSTSNRDQS 289
           HLGMLAALSAYRTMPGLSVSESPTRGVAAVHQ GNEAHDSTSNRDQS
Sbjct: 315 HLGMLAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 357

[Close]

BLAST of Spg025979 vs. ExPASy TrEMBL
Match: A0A6J1FZH4 (transcription factor TCP15-like OS=Cucurbita moschata OX=3662 GN=LOC111449334 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 7.0e-103
Identity = 198/227 (87.22%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 63  SGSTISAPSHLRTSYFSPTQFAVRTRSDLWDRNNNLVDDSSTFLNFNSPNYVNAFKHDQG 122
           SGSTISAPSH RTSYF+PTQFAVRTRSDLWDR+N LVDDSSTFLNFNS NYV   KHDQG
Sbjct: 135 SGSTISAPSHFRTSYFNPTQFAVRTRSDLWDRSNALVDDSSTFLNFNSSNYV---KHDQG 194

Query: 123 GIDVTDAGKKRRPEQSESSSENPVGNYLVQSSTGSIPASHSTPAPATFWMVTNPSNPASD 182
           GID+T+AGKKRRPEQSESSSENP+GNYLVQS++GSIPASH T  P TFWM+TNPSNPASD
Sbjct: 195 GIDLTEAGKKRRPEQSESSSENPIGNYLVQSNSGSIPASHGTAVPTTFWMMTNPSNPASD 254

Query: 183 PMWTFPSVSNSSMFRGAPVAAAGGGGFHFMNLPPPMALLPSAQQLSSGI-GSGGGPATDT 242
           PMWTFPS+S+SSMFRGA  AA G GGFHFMNLPPPMALLP+AQ L SGI GSGGGPATDT
Sbjct: 255 PMWTFPSMSSSSMFRGA-AAAGGSGGFHFMNLPPPMALLPTAQPLGSGIGGSGGGPATDT 314

Query: 243 HLGMLAALSAYRTMPGLSVSESPTRGVAAVHQGGNEAHDSTSNRDQS 289
           HLGMLAALSAYRTMPGLSVSESPTRGVAAVHQ GNEAHDSTSNRDQS
Sbjct: 315 HLGMLAALSAYRTMPGLSVSESPTRGVAAVHQSGNEAHDSTSNRDQS 357

[Close]

BLAST of Spg025979 vs. ExPASy TrEMBL
Match: A0A5A7SYQ5 (Transcription factor TCP15 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G004130 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 1.1e-84
Identity = 175/231 (75.76%), Postives = 187/231 (80.95%), Query Frame = 0


Query: 63  SGSTISAPSHLRTSYFSPTQFAVRTRSDLWDR----NNNLVDDSSTFLNFNSPNYVNAFK 122
           SGSTISAPSHLRTSYFSPTQFAVRTRSDLWDR    N+NLVDDSSTFLNFNS +YVN FK
Sbjct: 59  SGSTISAPSHLRTSYFSPTQFAVRTRSDLWDRTNNHNHNLVDDSSTFLNFNSSSYVNVFK 118

Query: 123 HDQGGIDVTDAGKKRRPEQSESSSENPVGNYLVQSSTGSIPASHSTPAPATFWMVTNPSN 182
            DQGGIDV + GKKRR EQSESSSE    NY+VQ+STGSIPAS S+  PATFWMVTNP+N
Sbjct: 119 QDQGGIDVVETGKKRRSEQSESSSE----NYMVQTSTGSIPASQSSQLPATFWMVTNPTN 178

Query: 183 PASDPMWTFPSVSNSSMFRGAPVAAAGGGGFHFMNLPPPMALLPSAQQLSSGIGSGGGPA 242
             SD MWTFPSV NSSM RG      GGGGFHFMNLPPPMALLPS QQL +GIG GGGPA
Sbjct: 179 QGSDQMWTFPSVGNSSMLRGTGGGGGGGGGFHFMNLPPPMALLPSGQQLGTGIGGGGGPA 238

Query: 243 TDTHLGMLAALSAYR-TMPGLSVSESPTRGVAAVHQGGNEAHDSTSNRDQS 289
           TD+HLGMLAALSAYR TMPGLSVSESPTRGV  V         +++N DQS
Sbjct: 239 TDSHLGMLAALSAYRTTMPGLSVSESPTRGVGGV---------TSNNPDQS 276

[Close]

BLAST of Spg025979 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-10
Identity = 58/166 (34.94%), Postives = 79/166 (47.59%), Query Frame = 0


Query: 131 KKRRPEQSESSSE----NPVGNYLVQSSTGSIPASHSTPAPATFWMVTNPSNPASDPMWT 190
           K      S SSS+    N +GNYLVQS+ GS+P S S PA A FW     S   +  +W 
Sbjct: 164 KNESHSSSSSSSQLLDHNQMGNYLVQSTAGSLPTSQS-PATAPFW----SSGDNTQNLWA 223

Query: 191 F------PSVSNSSMFRGAPVAAAGGGGFHFMNLPPPMALLPSAQQLSSGIGSGGGPATD 250
           F        V    ++      + GG G H MN   P+AL  S Q L+SG G GGG   +
Sbjct: 224 FNINPHHSGVVAGDVYNPNSGGSGGGSGVHLMNFAAPIALF-SGQPLASGYGGGGGGGGE 283

Query: 251 -THLGMLAAL-SAYRTMPGLSVSESPTRGVAAVHQGGNEAHDSTSN 285
            +H G+LAAL +AYR +       +  +     H   ++   STS+
Sbjct: 284 HSHYGVLAALNAAYRPVAETGNHNNNQQNRDGDHHHNHQEDGSTSH 323

The following BLAST results are available for this feature:

BLAST of Spg025979 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022987562.1	4.8e-106	86.75	transcription factor TCP15-like [Cucurbita maxima]	[more]
KAG6601425.1	4.1e-105	83.54	Transcription factor TCP15, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032208.1	1.2e-104	83.82	Transcription factor TCP15, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023552809.1	1.6e-104	82.45	transcription factor TCP15-like [Cucurbita pepo subsp. pepo]	[more]
XP_022957555.1	3.5e-104	83.40	transcription factor TCP15-like [Cucurbita moschata]	[more]

BLAST of Spg025979 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9L2	2.0e-09	34.94	Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1	[more]

BLAST of Spg025979 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JAP9	2.3e-106	86.75	transcription factor TCP15-like OS=Cucurbita maxima OX=3661 GN=LOC111485089 PE=4...	[more]
A0A6J1H0W2	1.7e-104	83.40	transcription factor TCP15-like OS=Cucurbita moschata OX=3662 GN=LOC111458919 PE...	[more]
A0A6J1HSI7	3.7e-104	87.67	transcription factor TCP15-like OS=Cucurbita maxima OX=3661 GN=LOC111467418 PE=4...	[more]
A0A6J1FZH4	7.0e-103	87.22	transcription factor TCP15-like OS=Cucurbita moschata OX=3662 GN=LOC111449334 PE...	[more]
A0A5A7SYQ5	1.1e-84	75.76	Transcription factor TCP15 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]

BLAST of Spg025979 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69690.1	1.4e-10	34.94	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR31072:SF170	TRANSCRIPTION FACTOR TCP23	coord: 63..268
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 63..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025979.1	Spg025979.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding