Spg025923 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg025923
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionU5 small nuclear ribonucleoprotein 40 kDa protein
Locationscaffold7: 277828 .. 281237 (+)
RNA-Seq ExpressionSpg025923
SyntenySpg025923
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGAAAACCCCGCGGCTCTGACGTATCGTGGTCGGTCAATCTGCACGGCAGGGCTCACAGCTGAGCAAACACCAGTCGAAGCGAATACCATTAGGGTTTTGGTTTTTGTGCTGATCTTCAAGGTTCATTTCTTAAACTCATCCATTTTGCAGATGTTTGTTTGATTTACAATTGCGTGTTTGCTTTCCTCGACCGTATATAAAAATTGAAGTAATTACTTTGTTCGAATTGGTTGACGATAAATTGTTAAATGATGCGTTAGGCAATTTGTAAATTATTTTCTGCTTTATAATTTTTCAATGCTGAAGATGGCTGTATTCTGCGAAGCACGGGGTCGGTCAGAACTTTGATTAGGTCTTTGTGTTTTGCTTGACTTCTCATGGCGAGTGCTTAGTTTGCTTTCATCATTGTCTGAATCACTTTCGTTGTTATTGTTGTTGTTGATAGTATTAAAACACAGGAAATGAAAACTCTAGCTAGATAACTACGCAACTAAATTAGTTTGATATACCCCCGAAGCAAATGTATCTTTAGGGGAAAGAGAGCTTGGTGCTTGGACCAAATTGGAATAATTTTGGGTTGATATGGACTTAGAAAGCATATTAGTTAATTTTTGAGTTGGTATAATGTGTTCACTATTCAAACCCCTAATCTTGCACCAGATTAGCTCATACATCAACAATTGCAAACAACAGGCTCCCATTTTCAGCTTAACTTCTAGACTGGCCTGACTGGGAGAGTTTGTTGCTTATGAGAGGACTTTCAATTGTTTGGATTAGACCTGAATTAATATTTGTGAACTCAGAAATATTCGACGAGGATGGTTTGGAAAGAGCCCTAATCAATTGTGCTGTTGAAATCTTTTTCTAAGGCTTCTCATTGATGATCAAGTGGTGACCATTGCCCTTTGCTGAAAGCAATGGGGACTACGTACCGTGGAAGTTGAAATAGGATTGGAAATGCTTTTTCTTAAATAATTATCTACCGCTAGAAAAAGAAGTCATCTCCATTCCTTGAAAATAGCTCAGAATGCCAAGGATTTCAAGTGCGAAAGTTTAATCTGAAGTAGATGCAAGAGAGTTGATATTTGTGATGTAGGGGTGCAAGTTGAAATTTAAAAAATCAACCAAATGGTTTGAGCAACATATGTCAACTGGTTTGATTTCATTAAATTTGATACTGAAAATAAGTTGATTGTTTCCGTTCTGATCATATTGGTTGGTTTTGGTCGATTTAATATGGTTTTCATAATTGATTAGTTTGGTAGACATTGATTGGTTTTCATCTGGCGCTTAGTTTGATTAGTTTGGTAGACTTTCAATTTTTCTTTAACCAATAGGTTGATTTCAAGTAGAGTTGAACCAACCCATCATTAGTAGAACCCAAACGTGGAGACTGGTTCATGTGGACATCAGCAGTGTCCAAGTTTTGTAGTGTCCAACCTGTAGGCACGAGCAATAGTAAGACCCATCCTAGTGGTACTAACTTGGACTACAATACTAAAGGTTTGACAATAATCAACGTCCAGTGATTGGAATTTTTTTATCCTTTAACTTGACCTTTTAATGACCTACTGCCCCATCTGGACTTCTCTTGATTTTAAATACCCATTTTGGCTGCCAATGCTTTGGACGGGTACAAATTTCTCAGGAAGTTGTATATAACCATTGATATACCCTTCAAAGTGGAATCCATTTGCTTCCAGACCATTTATGTAACCAGTCTGGATCTCGAGGTAGCCATGGCTACTTTTTTACCTTCACTCGTACCCTTTCGTAGCTGAGCTTAAGCTCTGCTACCATCTTAAGGAAGCAGATATATTGATGGAAATATCTCTTTAATATCTTCGTGTAATCGTAATAGATTGGCGTGGGCTTTACATTATAGACTCAAAAATTGCTTGATGGTCTAACAAACTAGAGCTTACTGAAATATTACCAGCTAACTGTGCCCGCTTCAACTAAACTGAATCAGATGAACAGATATACCAAACAAAAGCATCCGAAATCACCTATAGTTCAGTGGTTTTCTTGGAGATGTCTCCTAACATATTTTCTTAGTACGTTGTTTTCTCCCCTTTTGTATAACTTGATGCAAATCAACCTTTTATAAGAAGATAACTATAATTTTAATAGTAATTTAGTTTCAGAGTGTATCTCTGCATGCCAAAAAAAGTATATTTGCTTTTAAGTGATATGTTGTCATTATAGAATCGTTGCATGGAAAACTAGAAGATAGAATTATCAAGTTATTTCCTATCGTTTAATCATAATTCAAGAGTTGGAGTCCTATCGTTTCTTGTTCTATTAGTTTGCACAATGTAATTAATTTTTTACATTTCAGAGCCGGAGTCAAATATTAAGCATAATTCAGGATGCAAGCCCCTTCAGAAGGAGAAAATGCTTTGGCTACGGTTGGTCCGCGTCCAATGGAGTGGTCCACCGTTCCATATAATGCGCCTCAAGGACCTGGGCCAAATGGGAAACAACGAACATCAAGTCTGGAATCACCGATCATGTTGTTGACAGGCCATCAAAGTGCCATATATACATTAAAGTTTAATCCAGCTGGAAATGTGATTGCATCTGGGTCTCATGACAAGGAGATTTTCCTGTGGAACGTACATGGAGATTGCAAGAACTTTATGGTTTTGAGAGGGCATAAGAATGCAGTTCTCGATCTTCATTGGACTACCGATGGATCTCAGATAGTTAGTGCCAGCCCCGATAAAACGCTGAGAGCATGGGATGTCGAGACTGGAAAACAAATTAAGAAGATGGCAGAGCATTCCTCCTTTGTCAATTCATGTTGTCCCACGAGAAGAGGGCCACCACTAATTGTCAGTGGATCCGACGATGGAACTGCGAAACTTTGGGATATGCGTCAAAGGGGTGCCATTCAAACTTTTCCAGATAAATATCAGATTACAGCAGTAAGTTTCTCGGATGCATCAGATAAGATCTTCACAGGTGGAATCGACAACGATGTTAAGGTCTGGGATTTGCGCAAAGGTGAAGTGATGATGACTCTTCAAGGTCATCAAGATATGATAACTGGTATGCAGTTGAGTCCTGATGGTTCCTATCTCCTCACTAATGGAATGGACTGCAAGCTCTGCATATGGGACATGCGCCCATATGCGCCCCAAAACCGATGTGTCAAGATATTTGAAGGGCACCAACATAACTTCGAAAAGAACCTACTGAAATGTAGTTGGTCTCCCGACGGTAGCAAGGTCACAGCAGGCAGTTCAGATCGGATGGTTTACGTATGGGATACAACCTCTCGACGAATCTTGTTTAAGCTTCCTGGCCATACCGGATCTGTCAATGAGTGTGTCTTCCATCCCAGTGAGCCTATTATTGGATCTTGCAGTAGTGATAAACAGATATATCTTGGGGAGATTTAA

mRNA sequence

TTTGAAAACCCCGCGGCTCTGACGTATCGTGGTCGGTCAATCTGCACGGCAGGGCTCACAGCTGAGCAAACACCAGTCGAAGCGAATACCATTAGGGTTTTGGTTTTTGTGCTGATCTTCAAGATGGCTGTATTCTGCGAAGCACGGGGTCGGATGCAAGCCCCTTCAGAAGGAGAAAATGCTTTGGCTACGGTTGGTCCGCGTCCAATGGAGTGGTCCACCGTTCCATATAATGCGCCTCAAGGACCTGGGCCAAATGGGAAACAACGAACATCAAGTCTGGAATCACCGATCATGTTGTTGACAGGCCATCAAAGTGCCATATATACATTAAAGTTTAATCCAGCTGGAAATGTGATTGCATCTGGGTCTCATGACAAGGAGATTTTCCTGTGGAACGTACATGGAGATTGCAAGAACTTTATGGTTTTGAGAGGGCATAAGAATGCAGTTCTCGATCTTCATTGGACTACCGATGGATCTCAGATAGTTAGTGCCAGCCCCGATAAAACGCTGAGAGCATGGGATGTCGAGACTGGAAAACAAATTAAGAAGATGGCAGAGCATTCCTCCTTTGTCAATTCATGTTGTCCCACGAGAAGAGGGCCACCACTAATTGTCAGTGGATCCGACGATGGAACTGCGAAACTTTGGGATATGCGTCAAAGGGGTGCCATTCAAACTTTTCCAGATAAATATCAGATTACAGCAGTAAGTTTCTCGGATGCATCAGATAAGATCTTCACAGGTGGAATCGACAACGATGTTAAGGTCTGGGATTTGCGCAAAGGTGAAGTGATGATGACTCTTCAAGGTCATCAAGATATGATAACTGGTATGCAGTTGAGTCCTGATGGTTCCTATCTCCTCACTAATGGAATGGACTGCAAGCTCTGCATATGGGACATGCGCCCATATGCGCCCCAAAACCGATGTGTCAAGATATTTGAAGGGCACCAACATAACTTCGAAAAGAACCTACTGAAATGTAGTTGGTCTCCCGACGGTAGCAAGGTCACAGCAGGCAGTTCAGATCGGATGGTTTACGTATGGGATACAACCTCTCGACGAATCTTGTTTAAGCTTCCTGGCCATACCGGATCTGTCAATGAGTGTGTCTTCCATCCCAGTGAGCCTATTATTGGATCTTGCAGTAGTGATAAACAGATATATCTTGGGGAGATTTAA

Coding sequence (CDS)

TTTGAAAACCCCGCGGCTCTGACGTATCGTGGTCGGTCAATCTGCACGGCAGGGCTCACAGCTGAGCAAACACCAGTCGAAGCGAATACCATTAGGGTTTTGGTTTTTGTGCTGATCTTCAAGATGGCTGTATTCTGCGAAGCACGGGGTCGGATGCAAGCCCCTTCAGAAGGAGAAAATGCTTTGGCTACGGTTGGTCCGCGTCCAATGGAGTGGTCCACCGTTCCATATAATGCGCCTCAAGGACCTGGGCCAAATGGGAAACAACGAACATCAAGTCTGGAATCACCGATCATGTTGTTGACAGGCCATCAAAGTGCCATATATACATTAAAGTTTAATCCAGCTGGAAATGTGATTGCATCTGGGTCTCATGACAAGGAGATTTTCCTGTGGAACGTACATGGAGATTGCAAGAACTTTATGGTTTTGAGAGGGCATAAGAATGCAGTTCTCGATCTTCATTGGACTACCGATGGATCTCAGATAGTTAGTGCCAGCCCCGATAAAACGCTGAGAGCATGGGATGTCGAGACTGGAAAACAAATTAAGAAGATGGCAGAGCATTCCTCCTTTGTCAATTCATGTTGTCCCACGAGAAGAGGGCCACCACTAATTGTCAGTGGATCCGACGATGGAACTGCGAAACTTTGGGATATGCGTCAAAGGGGTGCCATTCAAACTTTTCCAGATAAATATCAGATTACAGCAGTAAGTTTCTCGGATGCATCAGATAAGATCTTCACAGGTGGAATCGACAACGATGTTAAGGTCTGGGATTTGCGCAAAGGTGAAGTGATGATGACTCTTCAAGGTCATCAAGATATGATAACTGGTATGCAGTTGAGTCCTGATGGTTCCTATCTCCTCACTAATGGAATGGACTGCAAGCTCTGCATATGGGACATGCGCCCATATGCGCCCCAAAACCGATGTGTCAAGATATTTGAAGGGCACCAACATAACTTCGAAAAGAACCTACTGAAATGTAGTTGGTCTCCCGACGGTAGCAAGGTCACAGCAGGCAGTTCAGATCGGATGGTTTACGTATGGGATACAACCTCTCGACGAATCTTGTTTAAGCTTCCTGGCCATACCGGATCTGTCAATGAGTGTGTCTTCCATCCCAGTGAGCCTATTATTGGATCTTGCAGTAGTGATAAACAGATATATCTTGGGGAGATTTAA

Protein sequence

FENPAALTYRGRSICTAGLTAEQTPVEANTIRVLVFVLIFKMAVFCEARGRMQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI
Homology
[Close]
BLAST of Spg025923 vs. NCBI nr
Match: XP_022945717.1 (U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita moschata] >KAG6573599.1 U5 small nuclear ribonucleoprotein 40 kDa protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012682.1 U5 small nuclear ribonucleoprotein 40 kDa protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 726.9 bits (1875), Expect = 9.6e-206
Identity = 338/344 (98.26%), Postives = 342/344 (99.42%), Query Frame = 0 

Query: 52  MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 111
           MQ PS GENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL
Sbjct: 1   MQVPSGGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60

Query: 112 KFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 171
           KFNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLDLHWTTDGSQIVSASPDKT
Sbjct: 61  KFNPAGSVIASGSHDKEIFLWNVHGDCKNYMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120

Query: 172 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 231
           LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 232 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 291
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 292 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 351
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300

Query: 352 DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI 396
           DTTSRRIL+KLPGHTGSVNECVFHPSEPI+GSCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344

[Close]
BLAST of Spg025923 vs. NCBI nr
Match: XP_023542336.1 (U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 725.3 bits (1871), Expect = 2.8e-205
Identity = 337/344 (97.97%), Postives = 342/344 (99.42%), Query Frame = 0 

Query: 52  MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 111
           MQ PS GENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL
Sbjct: 1   MQVPSGGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60

Query: 112 KFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 171
           KFNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLDLHWTTDGSQIVSASPDKT
Sbjct: 61  KFNPAGSVIASGSHDKEIFLWNVHGDCKNYMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120

Query: 172 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 231
           LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 232 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 291
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVM+TLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMITLQGHQDMITGMQLSPDGSYLLT 240

Query: 292 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 351
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300

Query: 352 DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI 396
           DTTSRRIL+KLPGHTGSVNECVFHPSEPI+GSCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344

[Close]
BLAST of Spg025923 vs. NCBI nr
Match: XP_022966914.1 (U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita maxima])

HSP 1 Score: 724.9 bits (1870), Expect = 3.6e-205
Identity = 337/344 (97.97%), Postives = 341/344 (99.13%), Query Frame = 0 

Query: 52  MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 111
           MQ PS GENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLL GHQSAIYTL
Sbjct: 1   MQVPSGGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLAGHQSAIYTL 60

Query: 112 KFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 171
           KFNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLDLHWTTDGSQIVSASPDKT
Sbjct: 61  KFNPAGSVIASGSHDKEIFLWNVHGDCKNYMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120

Query: 172 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 231
           LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 232 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 291
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 292 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 351
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300

Query: 352 DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI 396
           DTTSRRIL+KLPGHTGSVNECVFHPSEPI+GSCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344

[Close]
BLAST of Spg025923 vs. NCBI nr
Match: XP_008446018.1 (PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo] >KAA0034179.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo var. makuwa] >TYK15740.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 719.2 bits (1855), Expect = 2.0e-203
Identity = 334/344 (97.09%), Postives = 338/344 (98.26%), Query Frame = 0 

Query: 52  MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 111
           MQ PSEGENALATVGPRPMEWSTVPYN PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTL
Sbjct: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTL 60

Query: 112 KFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 171
           KFNP GNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWT DGSQIVSASPDKT
Sbjct: 61  KFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120

Query: 172 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 231
           LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 232 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 291
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 292 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 351
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300

Query: 352 DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI 396
           DTTSRRIL+KLPGHTGSVNECVFHPSEPI+ SCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI 344

[Close]
BLAST of Spg025923 vs. NCBI nr
Match: XP_004135336.1 (U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis sativus] >KGN51657.1 hypothetical protein Csa_008253 [Cucumis sativus])

HSP 1 Score: 713.8 bits (1841), Expect = 8.4e-202
Identity = 331/344 (96.22%), Postives = 336/344 (97.67%), Query Frame = 0 

Query: 52  MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 111
           MQ PSEGENALATVGPRPMEWSTVPYN PQGPGPN KQRTSSLESPIMLL+GHQSAIYTL
Sbjct: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYTL 60

Query: 112 KFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 171
           KFNP GNV+ASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWT DGSQIVSASPDKT
Sbjct: 61  KFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120

Query: 172 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 231
           LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 232 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 291
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 292 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 351
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300

Query: 352 DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI 396
           DTTSRRIL+KLPGHTGSVNECVFHPSEPI+ SC SDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 344

[Close]
BLAST of Spg025923 vs. ExPASy Swiss-Prot
Match: Q96DI7 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP40 PE=1 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 5.6e-124
Identity = 190/309 (61.49%), Postives = 249/309 (80.58%), Query Frame = 0 

Query: 87  GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRG 146
           G  R SSL++PIMLL+GH+  +Y  KF+P G+ +AS   D+ I LWNV+GDC N+  L+G
Sbjct: 48  GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG 107

Query: 147 HKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLI 206
           H  AV++LH+ TDGS + SAS DKT+  WD ETG+++K++  H+SFVNSC P RRGP L+
Sbjct: 108 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 167

Query: 207 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEV 266
            +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++
Sbjct: 168 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 227

Query: 267 MMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKN 326
             T++GH D +TG+ LS +GSYLL+N MD  + +WD+RP+AP+ RCVKIF+G+ HNFEKN
Sbjct: 228 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKN 287

Query: 327 LLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSS 386
           LL+CSWSPDGSK+ AGS+DR VYVWDTTSRRIL+KLPGH GS+NE  FHP EPII S SS
Sbjct: 288 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASS 347

Query: 387 DKQIYLGEI 396
           DK++Y+GEI
Sbjct: 348 DKRLYMGEI 356

[Close]
BLAST of Spg025923 vs. ExPASy Swiss-Prot
Match: Q6PE01 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus OX=10090 GN=Snrnp40 PE=1 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 9.6e-124
Identity = 188/309 (60.84%), Postives = 249/309 (80.58%), Query Frame = 0 

Query: 87  GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRG 146
           G  R SSL++PIMLL+GH+  +Y  KF+P G+ +AS   D+ I LWNV+GDC N+  L+G
Sbjct: 49  GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG 108

Query: 147 HKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLI 206
           H  AV++LH+ TDGS + SAS DKT+  WD ETG+++K++  H+SFVNSC P RRGP L+
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168

Query: 207 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEV 266
            +GSDDGT KLWD+R++ A+QTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++
Sbjct: 169 CTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 228

Query: 267 MMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKN 326
             T++GH D +TG+ LS +GSYLL+N MD  + +WD+RP+AP+ RCVKIF+G+ HNFEKN
Sbjct: 229 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKN 288

Query: 327 LLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSS 386
           LL+CSWSPDGSK+ AGS+DR VYVWDTTSRR+L+KLPGH GS+NE  FHP EPII S SS
Sbjct: 289 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASS 348

Query: 387 DKQIYLGEI 396
           DK++Y+GEI
Sbjct: 349 DKRLYMGEI 357

[Close]
BLAST of Spg025923 vs. ExPASy Swiss-Prot
Match: Q2HJH6 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus OX=9913 GN=SNRNP40 PE=2 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.2e-123
Identity = 189/309 (61.17%), Postives = 249/309 (80.58%), Query Frame = 0 

Query: 87  GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRG 146
           G  R SSL++PIMLL+GH+  +Y  KF+P G+ +AS   D+ I LWNV+GDC N+  L+G
Sbjct: 49  GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG 108

Query: 147 HKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLI 206
           H  AV++LH+ TDGS + SAS DKT+  WD ETG+++K++  H+SFVNSC P RRGP L+
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168

Query: 207 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEV 266
            +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++
Sbjct: 169 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 228

Query: 267 MMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKN 326
             T++GH D +TG+ LS +GSYLL+N MD  + +WD+RP+AP+ RCV+IF+G+ HNFEKN
Sbjct: 229 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKN 288

Query: 327 LLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSS 386
           LL+CSWSPDGSK+ AGS+DR VYVWDTTSRRIL+KLPGH GS+NE  FHP EPII S SS
Sbjct: 289 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASS 348

Query: 387 DKQIYLGEI 396
           DK++Y+GEI
Sbjct: 349 DKRLYMGEI 357

[Close]
BLAST of Spg025923 vs. ExPASy Swiss-Prot
Match: Q5RF51 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii OX=9601 GN=SNRNP40 PE=2 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 5.2e-122
Identity = 188/309 (60.84%), Postives = 248/309 (80.26%), Query Frame = 0 

Query: 87  GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRG 146
           G  R SSL++PIMLL+GH+  +Y  KF+P G+ +AS   D+ I LWNV+GDC N+  L+G
Sbjct: 48  GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCGNYATLKG 107

Query: 147 HKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLI 206
           +  AV++LH+ TDGS + SAS DKT+  WD ETG+++K++  H+SFVNSC P RRGP L+
Sbjct: 108 YSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 167

Query: 207 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEV 266
            +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++
Sbjct: 168 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 227

Query: 267 MMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKN 326
             T++GH D +TG+ LS +GSYLL+N MD  + +WD+RP+AP+ RCVKIF+G+ HNFEKN
Sbjct: 228 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKN 287

Query: 327 LLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSS 386
           LL+CSWSPDGSK+ AGS+DR V VWDTTSRRIL+KLPGH GS+NE  FHP EPII S SS
Sbjct: 288 LLRCSWSPDGSKIAAGSADRSVCVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASS 347

Query: 387 DKQIYLGEI 396
           DK++Y+GEI
Sbjct: 348 DKRLYMGEI 356

[Close]
BLAST of Spg025923 vs. ExPASy Swiss-Prot
Match: Q55AR8 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium discoideum OX=44689 GN=snrnp40 PE=3 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.9e-111
Identity = 178/310 (57.42%), Postives = 230/310 (74.19%), Query Frame = 0 

Query: 87  GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRG 146
           G +RTS LE PIM L GH+  IY+ KFN  G  +ASG  DKEIFLWNV+G+C N+ VL+G
Sbjct: 44  GTERTSKLEHPIMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKG 103

Query: 147 HKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLI 206
           HK  +L+LHW+TD ++I +A  DK++  WD   G+ IK++ EHS  VNSCCP RRGPPL+
Sbjct: 104 HKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLV 163

Query: 207 VSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGE- 266
            SGSDD +A+++D R +G+   F  KY +T+V FSDASD++ TGGIDN ++VWD+R  E 
Sbjct: 164 ASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQED 223

Query: 267 VMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEK 326
            + TL  HQD IT   +S DG+YLL+N MD    IWD+RPYAP NR +K F G Q+NFEK
Sbjct: 224 PLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEK 283

Query: 327 NLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCS 386
           NL+K SWS DG ++  GSSDR VY+WDT ++++ + LPGH+G+VNE  FHP+EPII SCS
Sbjct: 284 NLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCS 343

Query: 387 SDKQIYLGEI 396
           SDK IYLGEI
Sbjct: 344 SDKTIYLGEI 353

[Close]
BLAST of Spg025923 vs. ExPASy TrEMBL
Match: A0A6J1G1Q0 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111449859 PE=4 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 4.6e-206
Identity = 338/344 (98.26%), Postives = 342/344 (99.42%), Query Frame = 0 

Query: 52  MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 111
           MQ PS GENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL
Sbjct: 1   MQVPSGGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 60

Query: 112 KFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 171
           KFNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLDLHWTTDGSQIVSASPDKT
Sbjct: 61  KFNPAGSVIASGSHDKEIFLWNVHGDCKNYMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120

Query: 172 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 231
           LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 232 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 291
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 292 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 351
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300

Query: 352 DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI 396
           DTTSRRIL+KLPGHTGSVNECVFHPSEPI+GSCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344

[Close]
BLAST of Spg025923 vs. ExPASy TrEMBL
Match: A0A6J1HV60 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111466479 PE=4 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 1.8e-205
Identity = 337/344 (97.97%), Postives = 341/344 (99.13%), Query Frame = 0 

Query: 52  MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 111
           MQ PS GENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLL GHQSAIYTL
Sbjct: 1   MQVPSGGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLAGHQSAIYTL 60

Query: 112 KFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 171
           KFNPAG+VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLDLHWTTDGSQIVSASPDKT
Sbjct: 61  KFNPAGSVIASGSHDKEIFLWNVHGDCKNYMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 120

Query: 172 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 231
           LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 232 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 291
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 292 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 351
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 300

Query: 352 DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI 396
           DTTSRRIL+KLPGHTGSVNECVFHPSEPI+GSCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344

[Close]
BLAST of Spg025923 vs. ExPASy TrEMBL
Match: A0A5A7SYI1 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002400 PE=4 SV=1)

HSP 1 Score: 719.2 bits (1855), Expect = 9.7e-204
Identity = 334/344 (97.09%), Postives = 338/344 (98.26%), Query Frame = 0 

Query: 52  MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 111
           MQ PSEGENALATVGPRPMEWSTVPYN PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTL
Sbjct: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTL 60

Query: 112 KFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 171
           KFNP GNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWT DGSQIVSASPDKT
Sbjct: 61  KFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120

Query: 172 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 231
           LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 232 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 291
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 292 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 351
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300

Query: 352 DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI 396
           DTTSRRIL+KLPGHTGSVNECVFHPSEPI+ SCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI 344

[Close]
BLAST of Spg025923 vs. ExPASy TrEMBL
Match: A0A1S3BDK5 (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucumis melo OX=3656 GN=LOC103488871 PE=4 SV=1)

HSP 1 Score: 719.2 bits (1855), Expect = 9.7e-204
Identity = 334/344 (97.09%), Postives = 338/344 (98.26%), Query Frame = 0 

Query: 52  MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 111
           MQ PSEGENALATVGPRPMEWSTVPYN PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTL
Sbjct: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNGKQRTSSLESPIMLLSGHQSAIYTL 60

Query: 112 KFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 171
           KFNP GNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWT DGSQIVSASPDKT
Sbjct: 61  KFNPDGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120

Query: 172 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 231
           LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 232 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 291
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 292 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 351
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300

Query: 352 DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI 396
           DTTSRRIL+KLPGHTGSVNECVFHPSEPI+ SCSSDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCSSDKQIYLGEI 344

[Close]
BLAST of Spg025923 vs. ExPASy TrEMBL
Match: A0A0A0KTB1 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G588760 PE=4 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 4.1e-202
Identity = 331/344 (96.22%), Postives = 336/344 (97.67%), Query Frame = 0 

Query: 52  MQAPSEGENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTL 111
           MQ PSEGENALATVGPRPMEWSTVPYN PQGPGPN KQRTSSLESPIMLL+GHQSAIYTL
Sbjct: 1   MQVPSEGENALATVGPRPMEWSTVPYNPPQGPGPNVKQRTSSLESPIMLLSGHQSAIYTL 60

Query: 112 KFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKT 171
           KFNP GNV+ASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWT DGSQIVSASPDKT
Sbjct: 61  KFNPDGNVVASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKT 120

Query: 172 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 231
           LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD
Sbjct: 121 LRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPD 180

Query: 232 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 291
           KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT
Sbjct: 181 KYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLT 240

Query: 292 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW 351
           NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIW 300

Query: 352 DTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI 396
           DTTSRRIL+KLPGHTGSVNECVFHPSEPI+ SC SDKQIYLGEI
Sbjct: 301 DTTSRRILYKLPGHTGSVNECVFHPSEPIVASCGSDKQIYLGEI 344

[Close]
BLAST of Spg025923 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 660.2 bits (1702), Expect = 1.0e-189
Identity = 298/337 (88.43%), Postives = 321/337 (95.25%), Query Frame = 0 

Query: 59  ENALATVGPRPMEWSTVPYNAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGN 118
           EN  A  GPRPMEWSTVP++A QGPGPNGK RTSSLE+PIMLL+GH SA+YT+KFNPAG 
Sbjct: 7   ENETALSGPRPMEWSTVPHSASQGPGPNGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGT 66

Query: 119 VIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVE 178
           +IASGSHD+EIFLW VHGDCKNFMVL+GHKNA+LDLHWT+DGSQIVSASPDKT+RAWDVE
Sbjct: 67  LIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVE 126

Query: 179 TGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAV 238
           TGKQIKKMAEHSSFVNSCCPTRRGPPLI+SGSDDGTAKLWDMRQRGAIQTFPDKYQITAV
Sbjct: 127 TGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAV 186

Query: 239 SFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKL 298
           SFSDA+DKIFTGG+DNDVKVWDLRKGE  MTL+GHQD ITGM LSPDGSYLLTNGMD KL
Sbjct: 187 SFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKL 246

Query: 299 CIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRI 358
           C+WDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDG+KVTAGSSDRMV++WDTTSRR 
Sbjct: 247 CVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRT 306

Query: 359 LFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI 396
           ++KLPGHTGSVNECVFHP+EPIIGSCSSDK IYLGEI
Sbjct: 307 IYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343

[Close]
BLAST of Spg025923 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 162.9 bits (411), Expect = 5.2e-40
Identity = 91/296 (30.74%), Postives = 154/296 (52.03%), Query Frame = 0 

Query: 101 LTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVH----GDCKNFMVLRGHKNAVLDLHW 160
           LT H  A+ ++KF+  G ++AS S DK I  + ++       +      GH+N + D+ +
Sbjct: 20  LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79

Query: 161 TTDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAK 220
           ++D   IVSAS DKTL+ WDVETG  IK +  H+++   C        +IVSGS D T +
Sbjct: 80  SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYA-FCVNFNPQSNMIVSGSFDETVR 139

Query: 221 LWDMRQRGAIQTFP-DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQ 280
           +WD+     ++  P     +TAV F+     I +   D   ++WD   G  + TL     
Sbjct: 140 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 199

Query: 281 DMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSP 340
             ++ ++ SP+G ++L   +D  L +W++       + +K + GH  N +  +       
Sbjct: 200 PPVSFVRFSPNGKFILVGTLDNTLRLWNI----SSAKFLKTYTGHV-NAQYCISSAFSVT 259

Query: 341 DGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQI 391
           +G ++ +GS D  V++W+  S+++L KL GHT +V     HP+E +I S S DK +
Sbjct: 260 NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309

[Close]
BLAST of Spg025923 vs. TAIR 10
Match: AT5G64730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 5.3e-29
Identity = 81/296 (27.36%), Postives = 129/296 (43.58%), Query Frame = 0 

Query: 100 LLTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTD 159
           +L GH+ A+   +FN  GN   +   D+ I LWN H         + H   V D+H T+D
Sbjct: 13  ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGIL-IKTYKSHGREVRDVHVTSD 72

Query: 160 GSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWD 219
            ++  S   D+ +  WDV TG+ I+K   H   VN+         ++VS   D + ++WD
Sbjct: 73  NAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNA-VKFNDSSSVVVSAGFDRSLRVWD 132

Query: 220 MRQRGA-----IQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQ 279
            R         I TF D    T +S      +I  G +D  V+ +D+R G  M    G  
Sbjct: 133 CRSHSVEPVQIIDTFLD----TVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLGQP 192

Query: 280 DMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSP 339
             +  + +S DG+ +L   +D  L + D          +++++GH     K    C  + 
Sbjct: 193 --VNCISISNDGNCVLAGCLDSTLRLLD----RTTGELLQVYKGHISKSFKT--DCCLTN 252

Query: 340 DGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQI 391
             + V  GS D +V+ WD    ++L K   H   V    +HP E  + + S D  I
Sbjct: 253 SDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTI 294

[Close]
BLAST of Spg025923 vs. TAIR 10
Match: AT5G52820.1 (WD-40 repeat family protein / notchless protein, putative )

HSP 1 Score: 121.7 bits (304), Expect = 1.3e-27
Identity = 86/301 (28.57%), Postives = 144/301 (47.84%), Query Frame = 0 

Query: 101 LTGHQSAIYTLKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDG 160
           + GH  A+  + F+P G  +ASGS D  + LW+++ +   F   +GHKN VL + W+ DG
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLF-TCKGHKNWVLTVAWSPDG 164

Query: 161 SQIVSASPDKTLRAWDVETGK-QIKKMAEHSSFVN--SCCPTRRGPPL--IVSGSDDGTA 220
             +VS S    +  W+ + G+ +   +  H  ++   S  P     P    V+ S DG A
Sbjct: 165 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDA 224

Query: 221 KLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQ 280
           ++WD+  ++  I        +T V +      I+TG  D  +K+W+  +G+++  L+GH 
Sbjct: 225 RIWDITLKKSIICLSGHTLAVTCVKWG-GDGIIYTGSQDCTIKMWETTQGKLIRELKGHG 284

Query: 281 DMITGMQLSPDGSYLLTNGMDCKLCIWDM--RPYAPQNRCVKIFEGHQHNFEKNLLKCSW 340
             I  + LS +  Y+L  G       +D   R Y P     K  E  ++N  K       
Sbjct: 285 HWINSLALSTE--YVLRTG------AFDHTGRQYPPNEEKQKALE--RYNKTK-----GD 344

Query: 341 SPDGSKVTAGSSDRMVYVWD-TTSRRILFKLPGHTGSVNECVFHPSEPIIGSCSSDKQIY 393
           SP+  ++ +GS D  +++W+ + S++   +L GH   VN   F P    I S S DK + 
Sbjct: 345 SPE--RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVR 386

[Close]
BLAST of Spg025923 vs. TAIR 10
Match: AT1G10580.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 9.4e-26
Identity = 70/291 (24.05%), Postives = 132/291 (45.36%), Query Frame = 0 

Query: 102 TGHQSAIYTLKFNP-AGNVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDG 161
           +GH   +  ++F P  G+++ S   D ++ +W+V+   K      GH  AV D+ ++ DG
Sbjct: 279 SGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDG 338

Query: 162 SQIVSASPDKTLRAWDVETGKQIKKMAEHS-SFVNSCCPTRRGPPLIVSGSDDGTAKLWD 221
           S+ ++A  DK ++ WD ETG+ I   +     +V    P      ++++G  D     WD
Sbjct: 339 SKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 398

Query: 222 MRQRGAIQTFPDKY-QITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMI 281
           +      Q +      +  ++F D + +  T   D  ++VW+     V+  + + H   +
Sbjct: 399 INTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 458

Query: 282 TGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGS 341
             + + P+G++L    +D ++ I+  R     N+  K F G  H       + ++SPDG 
Sbjct: 459 PSISVHPNGNWLAAQSLDNQILIYSTRERFQLNK-KKRFAG--HIVAGYACQVNFSPDGR 518

Query: 342 KVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPI-IGSCSSD 388
            V +G  +   + WD  S ++   L  H G      +HP E   + +C  D
Sbjct: 519 FVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWD 566

The following BLAST results are available for this feature:
BLAST of Spg025923 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022945717.19.6e-20698.26U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita moschata] >KAG65735... [more]
XP_023542336.12.8e-20597.97U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita pepo subsp. pepo][more]
XP_022966914.13.6e-20597.97U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita maxima][more]
XP_008446018.12.0e-20397.09PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo] >KAA... [more]
XP_004135336.18.4e-20296.22U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis sativus] >KGN51657.1 ... [more]
BLAST of Spg025923 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q96DI75.6e-12461.49U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens OX=9606 GN=SNR... [more]
Q6PE019.6e-12460.84U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus OX=10090 GN=Sn... [more]
Q2HJH61.2e-12361.17U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus OX=9913 GN=SNRNP... [more]
Q5RF515.2e-12260.84U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii OX=9601 GN=SNR... [more]
Q55AR81.9e-11157.42U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium discoideum OX... [more]
BLAST of Spg025923 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G1Q04.6e-20698.26U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1HV601.8e-20597.97U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucurbita maxima OX=3661 GN... [more]
A0A5A7SYI19.7e-20497.09U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucumis melo var. makuwa OX... [more]
A0A1S3BDK59.7e-20497.09U5 small nuclear ribonucleoprotein 40 kDa protein OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A0A0KTB14.1e-20296.22WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G... [more]
BLAST of Spg025923 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G43770.11.0e-18988.43Transducin/WD40 repeat-like superfamily protein [more]
AT3G49660.15.2e-4030.74Transducin/WD40 repeat-like superfamily protein [more]
AT5G64730.15.3e-2927.36Transducin/WD40 repeat-like superfamily protein [more]
AT5G52820.11.3e-2728.57WD-40 repeat family protein / notchless protein, putative [more]
AT1G10580.19.4e-2624.05Transducin/WD40 repeat-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 163..177
score: 37.9
coord: 120..134
score: 35.64
coord: 206..220
score: 41.82
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 179..219
e-value: 1.6E-7
score: 41.0
coord: 263..302
e-value: 1.6E-8
score: 44.3
coord: 137..176
e-value: 4.4E-8
score: 42.9
coord: 222..260
e-value: 3.2E-4
score: 30.0
coord: 309..352
e-value: 1.1E-6
score: 38.2
coord: 355..394
e-value: 0.0014
score: 27.9
coord: 94..133
e-value: 2.8E-8
score: 43.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 265..302
e-value: 8.7E-6
score: 26.4
coord: 139..176
e-value: 3.0E-4
score: 21.5
coord: 359..392
e-value: 0.12
score: 13.3
coord: 97..133
e-value: 3.3E-6
score: 27.7
coord: 235..260
e-value: 0.011
score: 16.6
coord: 311..352
e-value: 3.0E-6
score: 27.9
coord: 181..219
e-value: 5.0E-4
score: 20.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 144..185
score: 16.523727
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 331..361
score: 10.742378
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 362..395
score: 9.004632
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 186..228
score: 10.541869
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 101..134
score: 15.35409
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 270..304
score: 13.516088
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 235..269
score: 12.580379
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 93..395
e-value: 1.3E-121
score: 407.1
NoneNo IPR availablePANTHERPTHR44006:SF1U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEINcoord: 81..395
NoneNo IPR availablePANTHERPTHR44006U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEINcoord: 81..395
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 101..134
score: 12.657402
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 228..265
score: 9.151057
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 362..395
score: 8.966513
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 144..181
score: 12.578312
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 270..304
score: 11.207411
NoneNo IPR availableCDDcd00200WD40coord: 101..392
e-value: 1.07377E-74
score: 232.225
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 206..220
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 247..261
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 120..134
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 339..353
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 163..177
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 98..392

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg025923.1Spg025923.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0071013 catalytic step 2 spliceosome
molecular_function GO:0005515 protein binding