Spg025920 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg025920
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold7: 3214955 .. 3215356 (+)
RNA-Seq ExpressionSpg025920
SyntenySpg025920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAACACTGGAGATATCAATACGACTCCAGAGACTTCTTTCGCCCAGCATTTCCATATCCTTCGTAAGACATGTTCAAGCTTGGACATTTCAACCAATCTTCTGTACTGTATATTGTGCTTCTCCTTCAAATCAGTCACCCTCATTCTCTTGTTTCCTTATGAGCAAGTGAATGGGAATCCTGTGCCTGCTATAATCTTCAAGGGCCTTCCATCAACATTTCATGCCTTTCTTCTTTCAATTGTGATGGCATTCTCAGGTGCATTTAATGCCTTGATGCTTGCTACTAATAAGCCAAGAATTGCCAAGTTCTGCAGCTACTATTCTATGGCGTTTATGGCCTCAGCTGTAGTTTTATTGATCTGGGCTTTGTTTCAGACAGTTTTTAACCTGATATGA

mRNA sequence

ATGAAGAACACTGGAGATATCAATACGACTCCAGAGACTTCTTTCGCCCAGCATTTCCATATCCTTCGTAAGACATGTTCAAGCTTGGACATTTCAACCAATCTTCTGTACTGTATATTGTGCTTCTCCTTCAAATCAGTCACCCTCATTCTCTTGTTTCCTTATGAGCAAGTGAATGGGAATCCTGTGCCTGCTATAATCTTCAAGGGCCTTCCATCAACATTTCATGCCTTTCTTCTTTCAATTGTGATGGCATTCTCAGGTGCATTTAATGCCTTGATGCTTGCTACTAATAAGCCAAGAATTGCCAAGTTCTGCAGCTACTATTCTATGGCGTTTATGGCCTCAGCTGTAGTTTTATTGATCTGGGCTTTGTTTCAGACAGTTTTTAACCTGATATGA

Coding sequence (CDS)

ATGAAGAACACTGGAGATATCAATACGACTCCAGAGACTTCTTTCGCCCAGCATTTCCATATCCTTCGTAAGACATGTTCAAGCTTGGACATTTCAACCAATCTTCTGTACTGTATATTGTGCTTCTCCTTCAAATCAGTCACCCTCATTCTCTTGTTTCCTTATGAGCAAGTGAATGGGAATCCTGTGCCTGCTATAATCTTCAAGGGCCTTCCATCAACATTTCATGCCTTTCTTCTTTCAATTGTGATGGCATTCTCAGGTGCATTTAATGCCTTGATGCTTGCTACTAATAAGCCAAGAATTGCCAAGTTCTGCAGCTACTATTCTATGGCGTTTATGGCCTCAGCTGTAGTTTTATTGATCTGGGCTTTGTTTCAGACAGTTTTTAACCTGATATGA

Protein sequence

MKNTGDINTTPETSFAQHFHILRKTCSSLDISTNLLYCILCFSFKSVTLILLFPYEQVNGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPRIAKFCSYYSMAFMASAVVLLIWALFQTVFNLI
Homology
BLAST of Spg025920 vs. NCBI nr
Match: XP_022992466.1 (uncharacterized protein LOC111488762 [Cucurbita maxima])

HSP 1 Score: 223.8 bits (569), Expect = 8.9e-55
Identity = 112/131 (85.50%), Postives = 120/131 (91.60%), Query Frame = 0

Query: 1   MKNTGDINTTPETSFAQHFHILRKTCSSLDISTNLLYCILCFSFKSVTLILLFPYEQVNG 60
           MKN G IN +PETSF QHFHIL K CS LDISTNL+YCILC SFK+VTLILLFPYEQVNG
Sbjct: 39  MKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNG 98

Query: 61  NPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPRIAKFCSYYSMAFMASAVVL 120
           NPVP IIFKGLPSTFHAFLLS VMAFSGAFNALML+ NKP+IA+FCSYYSMAFMASAVVL
Sbjct: 99  NPVPTIIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKPKIARFCSYYSMAFMASAVVL 158

Query: 121 LIWALFQTVFN 132
           LIWA++QTVFN
Sbjct: 159 LIWAVYQTVFN 169

BLAST of Spg025920 vs. NCBI nr
Match: KAG6601352.1 (hypothetical protein SDJN03_06585, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223.4 bits (568), Expect = 1.2e-54
Identity = 111/131 (84.73%), Postives = 120/131 (91.60%), Query Frame = 0

Query: 1   MKNTGDINTTPETSFAQHFHILRKTCSSLDISTNLLYCILCFSFKSVTLILLFPYEQVNG 60
           MKN G IN +PETSF QHFHIL K CS LDISTNL+YCILC SFK+VTLILLFPYEQVNG
Sbjct: 1   MKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNG 60

Query: 61  NPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPRIAKFCSYYSMAFMASAVVL 120
           NPVP +IFKGLPSTFHAFLLS VMAFSGAFNALML+ NKP+IA+FCSYYSMAFMASAVVL
Sbjct: 61  NPVPTVIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKPKIARFCSYYSMAFMASAVVL 120

Query: 121 LIWALFQTVFN 132
           LIWA++QTVFN
Sbjct: 121 LIWAVYQTVFN 131

BLAST of Spg025920 vs. NCBI nr
Match: KAE8648779.1 (hypothetical protein Csa_009128 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 8.1e-32
Identity = 83/132 (62.88%), Postives = 88/132 (66.67%), Query Frame = 0

Query: 1   MKNTGDINTTPETSFAQHFHILRKTCSSLDISTNLLYCILCFSFKSVTLILLFPYEQVNG 60
           MKN  DIN +P+T FAQHFHIL                                   VNG
Sbjct: 10  MKNRRDINKSPDTCFAQHFHIL-----------------------------------VNG 69

Query: 61  NPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPRIAKFCSYYSMAFMASAVVL 120
           N VPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP+IAKFCSYYS+ FM SAVVL
Sbjct: 70  NLVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSLGFMVSAVVL 106

Query: 121 LIWALFQTVFNL 133
             WA+FQTVFNL
Sbjct: 130 FFWAVFQTVFNL 106

BLAST of Spg025920 vs. NCBI nr
Match: EOY01535.1 (Uncharacterized protein TCM_011399 [Theobroma cacao])

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-18
Identity = 57/112 (50.89%), Postives = 74/112 (66.07%), Query Frame = 0

Query: 14  SFAQHFHILRKTCSSLDISTNLLYCILCFSFKSVTLILLFPYEQVNGNPVPAIIFKGLPS 73
           +F  H     +  SS+ + T +L  IL  SF   T+++L P+E V G+PVP I+FKG P+
Sbjct: 14  TFYPHHVSFSEMLSSIAVQTTILESILFISFTVATILILLPHEYVKGSPVPIIVFKGHPA 73

Query: 74  TFHAFLLSIVMAFSGAFNALMLATNKPRIAKFCSYYSMAFMASAVVLLIWAL 126
           TFHAF + I+ AFSGAF ALM   N PRIA  C  YS+A MASA+ LLIWA+
Sbjct: 74  TFHAFTICIIFAFSGAFCALM-TPNSPRIASLCGCYSIASMASAIGLLIWAV 124

BLAST of Spg025920 vs. NCBI nr
Match: XP_040861221.1 (uncharacterized protein LOC121172803 [Glycine max] >KAG5059707.1 hypothetical protein JHK87_000736 [Glycine soja] >KAG5088117.1 hypothetical protein JHK86_000729 [Glycine max] >KRH75196.1 hypothetical protein GLYMA_01G069000v4 [Glycine max] >RZC28841.1 hypothetical protein D0Y65_000706 [Glycine soja])

HSP 1 Score: 102.4 bits (254), Expect = 3.0e-18
Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = 0

Query: 21  ILRKTCSSLDISTNLLYCILCFSFKSVTLILLFPYEQVNGNPVPAIIFKGLPSTFHAFLL 80
           I + T +S+   T LL C+L   F  +T++L  PYE ++ NPVP I+FKG P TFHAF++
Sbjct: 8   IYQTTLASIPHYT-LLECVLGICFTVITILLQLPYEYIDNNPVPTIVFKGRPRTFHAFII 67

Query: 81  SIVMAFSGAFNALMLATNKPRIAKFCSYYSMAFMASAVVLLIWALFQTVFN 132
            I+ AFSGA NAL +A NK R ++ C YY+MA MASA+ +L+WAL  T  N
Sbjct: 68  CIIFAFSGATNAL-VAFNKSRFSRLCGYYAMASMASALAILLWALCCTCIN 116

BLAST of Spg025920 vs. ExPASy TrEMBL
Match: A0A6J1JTM5 (uncharacterized protein LOC111488762 OS=Cucurbita maxima OX=3661 GN=LOC111488762 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.3e-55
Identity = 112/131 (85.50%), Postives = 120/131 (91.60%), Query Frame = 0

Query: 1   MKNTGDINTTPETSFAQHFHILRKTCSSLDISTNLLYCILCFSFKSVTLILLFPYEQVNG 60
           MKN G IN +PETSF QHFHIL K CS LDISTNL+YCILC SFK+VTLILLFPYEQVNG
Sbjct: 39  MKNAGAINMSPETSFPQHFHILGKACSRLDISTNLMYCILCCSFKTVTLILLFPYEQVNG 98

Query: 61  NPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPRIAKFCSYYSMAFMASAVVL 120
           NPVP IIFKGLPSTFHAFLLS VMAFSGAFNALML+ NKP+IA+FCSYYSMAFMASAVVL
Sbjct: 99  NPVPTIIFKGLPSTFHAFLLSTVMAFSGAFNALMLSANKPKIARFCSYYSMAFMASAVVL 158

Query: 121 LIWALFQTVFN 132
           LIWA++QTVFN
Sbjct: 159 LIWAVYQTVFN 169

BLAST of Spg025920 vs. ExPASy TrEMBL
Match: A0A0A0KT20 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G607970 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 9.6e-55
Identity = 114/132 (86.36%), Postives = 120/132 (90.91%), Query Frame = 0

Query: 1   MKNTGDINTTPETSFAQHFHILRKTCSSLDISTNLLYCILCFSFKSVTLILLFPYEQVNG 60
           MKN  DIN +P+T FAQHFHIL KTCSSLDISTNLLY ILC SFK+VTLILLFPYEQVNG
Sbjct: 10  MKNRRDINKSPDTCFAQHFHILGKTCSSLDISTNLLYSILCLSFKTVTLILLFPYEQVNG 69

Query: 61  NPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPRIAKFCSYYSMAFMASAVVL 120
           N VPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP+IAKFCSYYS+ FM SAVVL
Sbjct: 70  NLVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSLGFMVSAVVL 129

Query: 121 LIWALFQTVFNL 133
             WA+FQTVFNL
Sbjct: 130 FFWAVFQTVFNL 141

BLAST of Spg025920 vs. ExPASy TrEMBL
Match: A0A5B7B2W8 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_032285 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 5.9e-20
Identity = 54/90 (60.00%), Postives = 67/90 (74.44%), Query Frame = 0

Query: 35  LLYCILCFSFKSVTLILLFPYEQVNGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALM 94
           +L  IL  SF +  +++  PYE ++GNPVP IIFKGLPS FHAFL+ I+ AFSGA+  LM
Sbjct: 41  ILESILFASFTTANILIRLPYENIDGNPVPTIIFKGLPSAFHAFLICIIFAFSGAYCGLM 100

Query: 95  LATNKPRIAKFCSYYSMAFMASAVVLLIWA 125
           +  +KPR+A FC Y SMA MASAV LLIWA
Sbjct: 101 MIPHKPRLATFCGYCSMASMASAVALLIWA 130

BLAST of Spg025920 vs. ExPASy TrEMBL
Match: A0A5B7B649 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_032284 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.0e-19
Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0

Query: 35  LLYCILCFSFKSVTLILLFPYEQVNGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALM 94
           +L  IL  SF +  +++  PYE ++GNPVP IIFKGLPS FHAFL+ I+ AFSGA+  LM
Sbjct: 48  ILESILFASFTTANILIRLPYENIDGNPVPTIIFKGLPSAFHAFLICIIFAFSGAYCGLM 107

Query: 95  LATNKPRIAKFCSYYSMAFMASAVVLLIWA 125
           +  +KPR+A FC Y SMA MASAV L+IWA
Sbjct: 108 MIPHKPRLATFCGYCSMASMASAVALMIWA 137

BLAST of Spg025920 vs. ExPASy TrEMBL
Match: A0A5B7B2L8 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_032286 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.0e-19
Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0

Query: 35  LLYCILCFSFKSVTLILLFPYEQVNGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALM 94
           +L  IL  SF +  +++  PYE ++GNPVP IIFKGLPS FHAFL+ I+ AFSGA+  LM
Sbjct: 47  ILESILFASFTTANILIRLPYENIDGNPVPTIIFKGLPSAFHAFLICIIFAFSGAYCGLM 106

Query: 95  LATNKPRIAKFCSYYSMAFMASAVVLLIWA 125
           +  +KPR+A FC Y SMA MASAV L+IWA
Sbjct: 107 MIPHKPRLATFCGYCSMASMASAVALMIWA 136

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022992466.18.9e-5585.50uncharacterized protein LOC111488762 [Cucurbita maxima][more]
KAG6601352.11.2e-5484.73hypothetical protein SDJN03_06585, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8648779.18.1e-3262.88hypothetical protein Csa_009128 [Cucumis sativus][more]
EOY01535.11.3e-1850.89Uncharacterized protein TCM_011399 [Theobroma cacao][more]
XP_040861221.13.0e-1850.45uncharacterized protein LOC121172803 [Glycine max] >KAG5059707.1 hypothetical pr... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1JTM54.3e-5585.50uncharacterized protein LOC111488762 OS=Cucurbita maxima OX=3661 GN=LOC111488762... [more]
A0A0A0KT209.6e-5586.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G607970 PE=4 SV=1[more]
A0A5B7B2W85.9e-2060.00Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_032285... [more]
A0A5B7B6491.0e-1958.89Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_032284... [more]
A0A5B7B2L81.0e-1958.89Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_032286... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg025920.1Spg025920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane