Spg025854 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025854
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	AvrRpt-cleavage domain-containing protein
Location	scaffold7: 835234 .. 836584 (+)
RNA-Seq Expression	Spg025854
Synteny	Spg025854

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCTCAAAAACTCTGCCATTTTCCATTTTCTCAGAACTGCAATCTTCAGATATGACAACAGTAAGATTCCATTTTGTCCATTATTATTGTGGTGTGCTTTGTAATGCTTGGTTGGCTTGTTTTCTTCATTGGTTTTGCTGGTTTTCTTGGTGGGATGAAGTTGAAGTTGAAGTTTTGGCATTGTTTTTCATTTCTGAGTTGTTCTTTTGCAGGCTCAGAAGGGTTCATCTTTGCCCAAATTTGGCGAGTGGGATGAAAAAAATCCTGCTGCAGCTGAAGGGTTCACAGTGATTTTCGACAGGGCACGAGATAATAAGAAGAATGGAGGGGCTCCAAATGATAATGTGACACCAGAGCAACACCAAAAACAATACCAATACCAAAATCAAAAACATGAACCTGCTAAGAAGAATCCCAAGCACAAGTATCCAAGAAAGGAGGTATGTTATGTTATGTTTTGGGTTAAATTATATAAAATATCCCTGAAGTTTGGGGTAGATTTCAATTATGCCGTTAGACTTAAAAAGTTTCATTTTAACTTTTGAACTTCGAAATTGTTCTGAAAAATACTCTTGAGGACTTTTTAGTTAAAATGATGAATGGAAATTGATATGGTAGTTAATGTGTAAAAATTGGAAGGTATTCATTAAATCATTCACAACATCACTCATATAAATTGATGTAGTGGTTGATGATGTTATGTATGCCTTTCAATGTTGCATCAATTTTTGTACTTCTTTGTATTGGAAAAACCTTTCAAGGGTTTGTTTTTGGAACAATTTAAAAGTTCAGGGATTGAAATGAAACTTTTCAAAGTCTAAGAGCATAATCGAGACCTACCTCATAGTCGAAGAGTATATTTGTTGTATACTTTATCCTTATATGTTTTGTTGTGTTATGTATGCCTCTCTGCAGCTGTCTCCTTTGTTATGTTTTCACTCTTACAACATGCATTTAGCCAAACCATTTTGTTTCTTTCTTGCAGAAATCATGGCATTGCTGCTTATGGTAGACTTTTTGTGGCTCTGAAAGAACAAAATTCAGCTGTTTGTGGTGGCTTTTTTAGTGCAGAGATTGATGCAATTGGCTGTGTATACAGTTTGCCATTTGGTGTCTTATTTTTGGTAAAAATTTGTTGGGGTTTTCTTTCTGTTCATTACATTAGGCTTCTTGGGTTACCTCCTCCTGTACTTAATACATTGTTTATAGAAAGAAAAGGTTGAGTTGTTATTTTATTGTGTAAAAAGTTTTGAAGTTGGGGCCCTTTTGTTAATGGTAATGCATGATTCTTTTGACATTGTCTTATTTGATCATCTAGCTTATCTTTACATTTCATCAAAGTCATTGGAA

mRNA sequence

ATGACAACAGCTCAGAAGGGTTCATCTTTGCCCAAATTTGGCGAGTGGGATGAAAAAAATCCTGCTGCAGCTGAAGGGTTCACAGTGATTTTCGACAGGGCACGAGATAATAAGAAGAATGGAGGGGCTCCAAATGATAATGTGACACCAGAGCAACACCAAAAACAATACCAATACCAAAATCAAAAACATGAACCTGCTAAGAAGAATCCCAAGCACAAAAATCATGGCATTGCTGCTTATGGTAGACTTTTTGTGGCTCTGAAAGAACAAAATTCAGCTGTTTGTGGTGGCTTTTTTAGTGCAGAGATTGATGCAATTGGCTGTGTATACAGTTTGCCATTTGGTGTCTTATTTTTGGTAAAAATTTGTTGGGGTTTTCTTTCTGTTCATTACATTAGGCTTCTTGGGTTACCTCCTCCTGTACTTAATACATTGTTTATAGAAAGAAAAGGTTGA

Coding sequence (CDS)

ATGACAACAGCTCAGAAGGGTTCATCTTTGCCCAAATTTGGCGAGTGGGATGAAAAAAATCCTGCTGCAGCTGAAGGGTTCACAGTGATTTTCGACAGGGCACGAGATAATAAGAAGAATGGAGGGGCTCCAAATGATAATGTGACACCAGAGCAACACCAAAAACAATACCAATACCAAAATCAAAAACATGAACCTGCTAAGAAGAATCCCAAGCACAAAAATCATGGCATTGCTGCTTATGGTAGACTTTTTGTGGCTCTGAAAGAACAAAATTCAGCTGTTTGTGGTGGCTTTTTTAGTGCAGAGATTGATGCAATTGGCTGTGTATACAGTTTGCCATTTGGTGTCTTATTTTTGGTAAAAATTTGTTGGGGTTTTCTTTCTGTTCATTACATTAGGCTTCTTGGGTTACCTCCTCCTGTACTTAATACATTGTTTATAGAAAGAAAAGGTTGA

Protein sequence

MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQNQKHEPAKKNPKHKNHGIAAYGRLFVALKEQNSAVCGGFFSAEIDAIGCVYSLPFGVLFLVKICWGFLSVHYIRLLGLPPPVLNTLFIERKG

Homology

[Close]

BLAST of Spg025854 vs. NCBI nr
Match: KAG6573672.1 (hypothetical protein SDJN03_27559, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-19
Identity = 54/74 (72.97%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 1    MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQ 60
            MT+A +GSSLPKFGEWDEK+PAAAEGFTVIFDRARD KKNGG PN NV P+++Q Q QY+
Sbjct: 1857 MTSAHRGSSLPKFGEWDEKDPAAAEGFTVIFDRARDTKKNGGTPN-NVIPQENQIQNQYR 1916

Query: 61   NQKHEPAKKNPKHK 75
            ++ HE AKKN K K
Sbjct: 1917 SKNHEAAKKNQKQK 1929

[Close]

BLAST of Spg025854 vs. NCBI nr
Match: XP_022945363.1 (RPM1-interacting protein 4-like [Cucurbita moschata])

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-19
Identity = 54/74 (72.97%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 1  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQ 60
          MT+A +GSSLPKFGEWDEK+PAAAEGFTVIFDRARD KKNGG PN NV P+++Q Q QY+
Sbjct: 1  MTSAHRGSSLPKFGEWDEKDPAAAEGFTVIFDRARDTKKNGGTPN-NVIPQENQIQNQYR 60

Query: 61 NQKHEPAKKNPKHK 75
          ++ HE AKKN K K
Sbjct: 61 SKNHEAAKKNQKQK 73

[Close]

BLAST of Spg025854 vs. NCBI nr
Match: KAA0034227.1 (RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK15693.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 98.6 bits (244), Expect = 4.9e-17
Identity = 59/104 (56.73%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 1   MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPN--DNVTPEQHQKQYQ 60
           MT+AQKG  LPKFG+WDEKNPAAAEGFTVIF+RARDNKKNGG     +NV P Q++ Q Q
Sbjct: 1   MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQ 60

Query: 61  YQNQKHEPAKKNPKHKNHGIAAYGR-LFVALKEQNSA--VCGGF 100
              ++ +  +K P+ K  G+ A+GR LFV +KE  +   V GGF
Sbjct: 61  EPAKEIKQKQKYPR-KQDGVPAFGRPLFVTMKEHKTLLFVVGGF 103

[Close]

BLAST of Spg025854 vs. NCBI nr
Match: XP_038892913.1 (protein NOI4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 98.6 bits (244), Expect = 4.9e-17
Identity = 53/73 (72.60%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 4  AQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPN--DNVTPEQHQKQYQYQN 63
          A KG  LPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGG     +NV P+Q+Q   QYQN
Sbjct: 2  ASKGPFLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGGTGTPNNVIPQQNQN--QYQN 61

Query: 64 QKHEPAKKNPKHK 75
          +KHE AKKN +H+
Sbjct: 62 KKHEAAKKNHEHE 72

[Close]

BLAST of Spg025854 vs. NCBI nr
Match: XP_004135294.1 (protein NOI4 [Cucumis sativus] >KGN51712.1 hypothetical protein Csa_007898 [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-16
Identity = 52/77 (67.53%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGA---PNDNVTPEQHQKQY 60
          M +AQKG  LPKFG+WDE+NPAAAEGFTVIF+RARDNKKNGGA   PN+ + P       
Sbjct: 1  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPP------- 60

Query: 61 QYQNQKHEPAKKNPKHK 75
          Q Q+QK+EPAKKN KHK
Sbjct: 61 QNQSQKYEPAKKNQKHK 70

[Close]

BLAST of Spg025854 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 4  AQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAP-NDNVTPEQHQKQYQYQNQ 63
          + KG  LPKFGEWD  +PA+AEGFTVIF++ARD KK GG P +   + E H K       
Sbjct: 2  SDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPS 61

Query: 64 KHEPAK 69
          K +P K
Sbjct: 62 KPQPKK 67

[Close]

BLAST of Spg025854 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.5e-04
Identity = 20/57 (35.09%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 5   QKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQN 62
           +K + +PKFG+WDE NP++A+G+T IF++ R+ + +G   + +     HQ      N
Sbjct: 143 EKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRNPNN 199

[Close]

BLAST of Spg025854 vs. ExPASy TrEMBL
Match: A0A6J1G0L7 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111449617 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19
Identity = 54/74 (72.97%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 1  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQ 60
          MT+A +GSSLPKFGEWDEK+PAAAEGFTVIFDRARD KKNGG PN NV P+++Q Q QY+
Sbjct: 1  MTSAHRGSSLPKFGEWDEKDPAAAEGFTVIFDRARDTKKNGGTPN-NVIPQENQIQNQYR 60

Query: 61 NQKHEPAKKNPKHK 75
          ++ HE AKKN K K
Sbjct: 61 SKNHEAAKKNQKQK 73

[Close]

BLAST of Spg025854 vs. ExPASy TrEMBL
Match: A0A5D3CUX8 (RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001910 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.4e-17
Identity = 59/104 (56.73%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 1   MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPN--DNVTPEQHQKQYQ 60
           MT+AQKG  LPKFG+WDEKNPAAAEGFTVIF+RARDNKKNGG     +NV P Q++ Q Q
Sbjct: 1   MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPPQNRTQKQ 60

Query: 61  YQNQKHEPAKKNPKHKNHGIAAYGR-LFVALKEQNSA--VCGGF 100
              ++ +  +K P+ K  G+ A+GR LFV +KE  +   V GGF
Sbjct: 61  EPAKEIKQKQKYPR-KQDGVPAFGRPLFVTMKEHKTLLFVVGGF 103

[Close]

BLAST of Spg025854 vs. ExPASy TrEMBL
Match: A0A0A0KTF9 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G591770 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 6.9e-17
Identity = 52/77 (67.53%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGA---PNDNVTPEQHQKQY 60
          M +AQKG  LPKFG+WDE+NPAAAEGFTVIF+RARDNKKNGGA   PN+ + P       
Sbjct: 1  MASAQKGPFLPKFGDWDEQNPAAAEGFTVIFNRARDNKKNGGAAGTPNNVIPP------- 60

Query: 61 QYQNQKHEPAKKNPKHK 75
          Q Q+QK+EPAKKN KHK
Sbjct: 61 QNQSQKYEPAKKNQKHK 70

[Close]

BLAST of Spg025854 vs. ExPASy TrEMBL
Match: A0A1S3BEY0 (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103488926 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 7.2e-14
Identity = 47/72 (65.28%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 1  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNG---GAPNDNVTPEQHQKQY 60
          MT+AQKG  LPKFG+WDEKNPAAAEGFTVIF+RARDNKKNG   G PN+ + P       
Sbjct: 1  MTSAQKGPFLPKFGDWDEKNPAAAEGFTVIFNRARDNKKNGGGAGTPNNVIPP------- 60

Query: 61 QYQNQKHEPAKK 70
          Q + QK EPAK+
Sbjct: 61 QNRTQKQEPAKE 65

[Close]

BLAST of Spg025854 vs. ExPASy TrEMBL
Match: A0A6J1DEH9 (RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111019783 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.6e-11
Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 1  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAPNDNVTPEQHQKQYQYQ 60
          M +   G +LPKFGEWD K+PA+AEGFT+IF++ARDNKKNGG         Q     + Q
Sbjct: 1  MASGDNGRTLPKFGEWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQ-----KTQ 60

Query: 61 NQKHEPAKKNPKHK 75
          NQKHE +KKN K++
Sbjct: 61 NQKHEASKKNHKYE 69

[Close]

BLAST of Spg025854 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 6  KGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKK----NGGAPNDNVTPEQHQKQYQYQN 65
          KG  LPKFGEWD  NPA+AEGFTVIF +A D KK    +G  PN  V+P+++Q   Q  N
Sbjct: 5  KGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQNNN 64

Query: 66 QKHEPAKKNPKHKN 76
               + +NPK KN
Sbjct: 65 H----SSQNPKAKN 74

[Close]

BLAST of Spg025854 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 62.8 bits (151), Expect = 2.8e-10
Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 4  AQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAP-NDNVTPEQHQKQYQYQNQ 63
          + KG  LPKFGEWD  +PA+AEGFTVIF++ARD KK GG P +   + E H K       
Sbjct: 2  SDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPS 61

Query: 64 KHEPAKK 70
          K +P KK
Sbjct: 62 KPQPVKK 68

[Close]

BLAST of Spg025854 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.6e-10
Identity = 35/65 (53.85%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 6  KGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAP-NDNVTPEQHQKQYQYQNQKH 65
          KG  LPKFGEWD  +PA+AEGFTVIF++ARD KK GG P +   + E H K       K 
Sbjct: 20 KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKP 79

Query: 66 EPAKK 70
          +P KK
Sbjct: 80 QPVKK 84

[Close]

BLAST of Spg025854 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 34/64 (53.12%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 6  KGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKNGGAP-NDNVTPEQHQKQYQYQNQKH 65
          KG  LPKFGEWD  +PA+AEGFTVIF++ARD KK GG P +   + E H K       K 
Sbjct: 20 KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKP 79

Query: 66 EPAK 69
          +P K
Sbjct: 80 QPKK 83

[Close]

BLAST of Spg025854 vs. TAIR 10
Match: AT3G48450.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 33/80 (41.25%), Postives = 43/80 (53.75%), Query Frame = 0


Query: 1  MTTAQKGSSLPKFGEWDEKNPAAAEGFTVIFDRARDNKKN----GGAPNDNVTPEQHQKQ 60
          M T  +   LPKFGEWD  NP +AEGFTVIF++ARD+KK        P   V+P ++++ 
Sbjct: 1  MATGNRARPLPKFGEWDATNPGSAEGFTVIFNKARDDKKTMKTAVAGPESIVSPPRNEE- 60

Query: 61 YQYQNQKHEPAKKNPKHKNH 77
                   P   N  H NH
Sbjct: 61 --------PPKNNNNHHHNH 71

The following BLAST results are available for this feature:

BLAST of Spg025854 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573672.1	2.4e-19	72.97	hypothetical protein SDJN03_27559, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022945363.1	2.4e-19	72.97	RPM1-interacting protein 4-like [Cucurbita moschata]	[more]
KAA0034227.1	4.9e-17	56.73	RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK15693.1 RPM1-inte...	[more]
XP_038892913.1	4.9e-17	72.60	protein NOI4-like isoform X1 [Benincasa hispida]	[more]
XP_004135294.1	1.4e-16	67.53	protein NOI4 [Cucumis sativus] >KGN51712.1 hypothetical protein Csa_007898 [Cucu...	[more]

BLAST of Spg025854 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22633	2.0e-08	51.52	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8GYN5	8.5e-04	35.09	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of Spg025854 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0L7	1.1e-19	72.97	RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111449617 PE...	[more]
A0A5D3CUX8	2.4e-17	56.73	RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KTF9	6.9e-17	67.53	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G59...	[more]
A0A1S3BEY0	7.2e-14	65.28	RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103488926 PE=4 SV=...	[more]
A0A6J1DEH9	2.6e-11	54.05	RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111019783 P...	[more]

BLAST of Spg025854 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63270.1	1.9e-11	51.35	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	2.8e-10	52.24	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	3.6e-10	53.85	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.3	1.4e-09	53.13	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT3G48450.1	1.2e-08	41.25	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 5..39 e-value: 9.1E-20 score: 69.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..64
None	No IPR available	PANTHER	PTHR33159:SF48	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 1..75
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 1..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025854.1	Spg025854.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane