Spg025790 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025790
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RanBP2-type zinc finger protein
Location	scaffold7: 297498 .. 308239 (-)
RNA-Seq Expression	Spg025790
Synteny	Spg025790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTCACGCTACAAAACGGCGTTCGTACTCCTTTTTACCCGACGATCATCGCCGTTTCCGACTGAAAAATAGATTCGCGCAGCTATTCGGAGTCCACGAACAAGATCTCCCCGTCCTCGTCTTTCTGATAGGTCCGCAATATGTCTCAGGTCCGTTCACTCACTTAATTGTCTCACTAATCGTTCGTTGCTTCGTTTTCTGAAAGATTTTGACGTCTTGCTTCCTTAAACCCTAGAAAATCTTTGTTAATTATTTGATGTCGATGAATGGAAGCTTAATTGCACCGCAGTATTCCTCAAGTTATTGAATTAGAATAATATTGGCCAAATTTTATAGTCTTGATGATACTTAGGTTTTGTTCGATCTATCTGCGCATTTTTGTTTGTTTTTGTTCTCTTTCTCTATCGTTCCGTACGATTGCCGTGTTTCACCTTAAGGCTGCAATTGCACGATTCTGGTGGAGAATTTGAGTTTTAGATTCTCATACTAGTTCTTTTTGCTTTCAAGTGATGCATCCATTAGTTCTGAATAAAATTGTTTAACCTTCTCTTCTTTTCTCTCCTTTGTCTTGTATAGGTTGATAGCAGAAATTCCTCTGCAGCCAAACGGGCGAGAACTGATGGTATGCACTTTTAAATGTACTCGTTAGCCTTTTCGAGTGAATGCATATGGCATACCGATTAACGAGTTATATCTATTGTTATTTGAGTCCGGAGAGATTTCCATATTCGACATTGTTTACTGTTAATTAGGAGTTTCCTCTTCTTTCTCTCTAATAATAATTATTATTAGTATAATTTTTATCTGCCTTTGGTCTACACTCCAGCATGAAGAAAATATATTCGACTCCTCTGTATAGGTCTGTTTATTCATTTATTTGTTTGTAGGTAGCCGAAGGGAAGATGACTGGATTTGTACTAGTTGTGGAAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAATTGCACCCAGCCACGTCCTGCCGATCATAATTCTGTAAGACATGAATGTTTTAGTGTGTTTTCACCCGCTGTTTGTCTCTGTGCTAACCGCTGTGTTTTATATCTAATTGTATCCATGGCAGAGGAGACGGTCACCAAAATTTTTATGCACGATCTATAACTAAAAAGTTCACATAACTTCTTCCTTTTGTTTGTGGAAATTTTATTTCTAGTGTCCTTTTCATCTCTCTTTTACTTTTCATTTTTGGCACGGCTTATCTGGAGTTCTATTGTTTGTATTTTTCATTTTTAGGTTGTAATTATGTTTCACATTAGGTGGAAATTACTTTTTATCTTTGTATTTTGCATTTTTAGGTAGTAACTATGCTATCTTTAAGTTATTTTTGTAATTATGATTTTAGGATGTGCATTTTCTCACAAGCACAACTGATTATTACCTACTTGAGCTTCATGAGATAGGACTTCATTGAACATGTTAGGTTTAGGTTCTTCTTGGTGATACTTTCTTCAAGTACTCTAGTAGTTTTGATTTTTGTTAATTTTTTTTTCAGTTACTTGTAACATCCCTTGGCCAGTTCATGTACACCTCCCATACTTTTCTTTCATAAAAGAAAAGTTGGTTTATTAACCCACCACCGTCAGCACCAGCACACACAAAGTTGAACTCCACGTGTTCTTGATAAATAAATAACCTACTTGAGCTTTCTCTATCCAGAAATCTGCTGCCAAGCCTGTTCAAGCTCCACAGGGTTACTCATATTCTGCACCTTATATGGGTTCTGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCTTATGGTTCTTCCTTATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACGGAAGCCGATTTTCTGCAGGCAGCCCTTACAGACCTTTGCACCTATCTGGACCTGCACCTTATTCAAGTGGATCTATGATGGGAAATAGTATGTTCCATTTCTACTATGCTCACATTTGTTTGTGATTCTTATTTATGTCCTCATATTGTTCTGTTTGTCAAGATTATTACTTCAACTTCATTTGTCCTGTCTTCCACAAGTACTCTATGAGAAGTGGGTGCGTGTGCTGATTGATCCTCTATTTATCTATTTATATTGTTTCCTTCTTGTTATCACAGGTGCAGTGTATGGTATGCCACCCATAATGGATCGCTATGGCATGGCTTTGCCCATGGGCCCTGGTACCATGGTAGGTCTTTTGATAATAAATTATTACCCGGTGGCTCAGCAGTTTTTGTTTCTAAACTTTTATGTCTGGCGTATTTTTAGCTTAATCCCCCCTCAAATGACGATATTCAACATACATAGAGATATTGATGTAAAATTGTATGGAAATATTGAGAAAATGAATTATTAAATTTTTGTTTTTCTGACGACAAGAACTTAAAAAAAGAATCACATCATATCAAATTACAATATTCACCCTAGTTTTGAAAATCTGTTCTAATAATACATTAACTGATGGATTACAAAAAATATTAAAATATGATTTTTAGAAATGTTTTTTTTTTCAAGAAAAGAATTTCAATGCTTGAATGTTGAAGAGAAATATCTTTCCTATTGTGTAAAATTTATGAGCTAGTATATTTTTCAGGGTCCAAGGCCAGGTTTTTTTCCAGATGATATGTCTCAGAAGAAGGGTGCAGGTTGCCATTCTTTACTTGCTTGTTATCGACTGCTTTTATCAATGATGAAGTAAATTTTTTATCATCTAATTTCTTACTTATGCTCACCCAGACACTACTCGTGACAATGATTGGCCATGCCCAAAATGTGGAAACATCAACTTCTCATTTAGAACAGTCTGTAACATGAGGAAATGCAATACACCAAAGCCTGGGTCACAGGTCTGTTAAGCTATTTTCTTAGGAGTGAATGATTTTCGTATGTGCTCTTATGTTGCGACTATTCATCAAAACATCGTTGGCAAACATCTCCTTGTTTTCAAATAGTGGTGGATGAATATCTTTTGACATATTTCTTTCATGCATAACTCCCTTAAAAAAAATATTAGTTCGCTTAACTTTATTTACAAGTCTAACCTTTTTATTTATTTTGTTCATGTATTTTTGAAATGCAGGGCTCCAAAAATGACAAAAATTCTAGTAAGTTCATATAGTGTTCCAATAGAAGCCATTTCCTTTTCAATCTTCTATAAGCTTCATGATTTCTAATGTACTTGTCTATTTCAGAACAAAAGACGCCAGAGGGTAGCTGGAAGTGTGAGAAATGTAACAACATAAATTATCCATTCCGAACCAAATGCAATAGACAAAATTGTGGAGCCGACAAACCAGCGGATTCAGAGAAATCTCCATCACCAGCACAGGATGAAAATGATCAGGTCTGTTGTGTGAGTTTCTGTATTTATATTTGTTGTTCTCAATTGCTTATGCTTTTGTTCAGATATGTATGCATTATGAAGTGGATTCCATACTATTTGATTAACAAGATAATTTATGAACCACTTGAAAAGGGGAACCCTTTTGGTAAATTTTTGGTGGTAGTGGTTCTTTCGTTGAGTATACCCATTTCTATTTTAATTTTGTTTTCCCATTCATGCGTTAATTTGTCATTGTGTACTGTTCCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGAGTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCAGCAGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTAGTTCTGGTCTTTTCAATCATTTAATGCACCATATCATCAGCTGGATTGATCTGGCAAAAGATTTAATGGTTGGTTTCTGTCTGATAATTTAGGGACATTTACTTTTGGAATTCACTTGTTTAGTCTAGTGGGCCTGTTAACTTATGCACTAAAATATGTTGCAAGTAGACTAGACTGTACCCTTTCGGGTTTCAGTTCGATCTCTTAATTGTCTTTGTGCTGTTGGGTGTGCGTGTGCCAAACTGATCCTTTTCTAGGACAGGGTCCCAAAGTTCAGAGGATGCGTTGGACTAGATAGGGATAGGGTTCACTTTTGGGTTGGACTAAGGGGTTTTAGGCTCTCAGTCAAATTGCTTATCTGATGAACCGCGAAGGCATTCGTGGTATTTATTATATGACCCTTATTGGTGGCGTCACATCATTATTTTAGCATGTTGGTCGTCGAAAGTAATTGTAGCCTTCTCAAATGGAGTTTGAGAAGATGACTTAGGCACTATTATCGGTATTTAAGTTAGATTGCAATCTGTGGGGTGAGCCCCCATTTGCCAAGGGCCGTTTTTGTCATCATTGTTCGTATCTCATTTATTATTTGTTTGTTCTTGCATGTTGTTATTGTTCATGCAATTCTCTCTATTTCTGTCTATTATGTCTGGAGGAACCTCACACGTGTTCATGCATTGTTTGGAAATGTTCACGTAGTCATCACCTGAAGATTTCGTTTTCCAACTATTTGAAGTAGGTTTCACCTTATCACTAGGTTACTTTTACTTTTACTGCTCTTTTTTATTAATTTTTTTTTTGGAGGGGGTAGGGAATGTAGCAATAAAGTAAATTCATGTGGGTTTTATGGATTACCTTTGTTTGAAGTAGAGGTATTCACCTTATCACTAGGTTACCTTTGTTTAAAATAGTTGTTTCTAAACAACTTCAAAAATTGGTTTTCTTTTCTTTTCTTTTTTGCTAAAATGACCTTTTTTTTGCCATTAATTTCTGAGCAACTTTATTTTATGTTAAAATGACTGTTTTTCAAGTACTTTATCTTGTCATTTTTTTGTTTCTATTTTAAAAGCTAAATACCAGTTTTATTTGTAGCTTCACTTTCTGTTTCCTTTCGTTTTTTGCCCAAAGGATTATTTGTTGATTATTTTAAAAAATATTATTAAAATCATCAATCCATTTTATAAGTTTTTGAAAATGAATTTAATATTAGTCTATTGAAAGATTATAGTATTTTCGAACATAATTTGGTCAATTGTTTTTGGTAGAACAAAATTCTCTTTAAAAAAAATAATGTTTTAGAAGATTTTTTGGAATTGATCTTTATATTTTGACAGTTTAACCCAGATCATTTGAAGAGGTCATGGTTTATCTCAAGTCAAATTTTAAGCATTACTTAATCTCATTAAACTATATATCTGCAAAATCATCTAGATATAAAATATATCCGTTATCCGTTAATAAAAAAAGAGAGAAAGAAAACCTTCATTCACAAATCAAGAAAGATGTATTCCAACGCTATTGAAAGATGTTTCTACATATGGAGTTAAAGAACCAATCCTTGGATATGGGCGTGGTGAATCATTCAAGTAGGCCATGGGGGGCTCTTGTCGAAGTCTACCTCCAATGGTTGAGGCGTTCTCTTTAAAAGCTGGCAAATAAGCGCTGTTCCTCTACCTGATTTGTATTATATTGTGGATTTGTCTCCCGTAATTATAATCTTACAGGAAACTATCATCATCTTTCTATCCAAGTGGAAAATAAAATAATTTTTTGGCCGAGTTTGGGTCAATAGTGAAATATTTGAAGTGTCTTTGTTGCATATGTATAAGAAAAATTCTATCCATTTATCTTTGTTATTTTGTTTGTTGTACATAAAGAAATTCGATAAAATCCATCAAGTTTCTATACTTTAAAGGTAAATTTTTGAAAGGGAATATAACTTTTAGAATCTATTTTTTAATTAACAATATGTATAGCTCATACGTAATAATGTAATACTCATCTCTTTATTCTATTTTCTATCTCTATAATTTTTCTAATTTGATCAACATTTTTTATTTGACTTCTCTCGCTAAAATGTCTCTTCCTACGTTACTCAAAATTCTCTCTCAAACAAACAAAACACCATCTCTTTTCCTTTAAAAAAAAAAAAAAAAACCGAAAGTGTAATCAAATATTTTTTGTTTTGTTTTTGAGAAAAACCGAAAACAAAATAGTATCAGTTGATTTAAGGGTGGGTCAGCACAGAAGAATATCAGTGAAAAGGCAAGAAAAGGAGCGTACCGTGTAGATCCAATAACAAAGTTTTTGCATGGAAGCACAGTCCAATAACAAATTAATTAATTAAAATGGAGACCATGAAAATCGTGGGGAAAGAGTTGGCTGACCTTAACTTGAGGTGGTTGCGGCAGACCTCGCTAGGACCAAGAAGATCAACTCAATTGGTTAGCGAACATCCCAACCTCGCATGGTGTTTTGAAGAGTTGGAAGTCTTGAAAGAGACTGTTGCCTTCGATGTTTGGATGGTGGATTTGCATCTGCAATTCGATGGGCTGATGTTCGTTGCTCCAGCATTCTGAATCTACTGAAGCAAAGGGCAAATTTTGAATTCCTAGATTCATTGGCGACTGTGATATGCCGGTTTGGTTTGCATAATTAGGGTTACCAAGACGACTAGAGTTGTCAGGTGAAATAAGTTTTGCCTCATATGGACCCCTTAAATCAGTTGACAGAAGAGAGAGAGCACGTTGAAGATCCTGTGCTGAATTCAGATTGGAACAAATCATATATCCTTCTAAAACCTATCAAGAATCGCAAGTTTTATTTCTGTACAACACAAACTTAAAGTAAACAACATATTTTTACTTGGGAAATGTAAATATATAGTTTAACATTTGACATTTTCTAAACAGACCTAGGCTATACTAGAGTTTGAGGATGAATAACATGTACTAGGCTATTCAATGAAAGTTCGGTTTCTTACCAAAGGAAGAAAAAAAGACGCACTAAAAGGATCAATAGATAAACAAAATATGCAAGCTAGACATAGATTATCATTTTCCACACAAGAAGTTATTCATAATAGGAGTCAAATACTTTTTTTTTTTTTCAGGTTCCTTGATTGGGTCTTGAAGAATTTAAAACTTCTAGTTCTTATACTTCCGTTAAATATGATCACGTCTATGCATGTAAGACATTGCATTAAATGAATGTTTTTTTAATCACACACTATTACTTATTGCATATTATTTTTAGAAGAAACAAATACTGGTCCGCCCATTAAAAAGCAATAATAAGGAAATGATGCATGCATGAAGGAATTATCATGACGTGACGTTTGGAGAAAATTATTCGGCATATTGTCAATTTGTCATGAATCCAAGGATAAACTATCAACATCGAGTTCGTTAACAACCTAGGAACGAAATCATTATTGAATGATGGAATGCAAAAAGAATGTGCTCCTTTGTATAAAAGGGGTGAGAACGAACCTGTATCAAGAACCTTGGTTGCAGTAGCTCCTTTGAAGGGCACGAGCTTACTGGTATCGTGATAAGGCATAGCCTGCACACGACACATCTCATCCGCAGATACGTCCAACTGTCCATTCGAATCAAATGCCTGTTCAGGCTTTAATACATACTTGCCACATTGTGGGTATCTGGAGCTGAATGTAGATTCCCATGCTGAATTTGAATGAGGTCTAGGATAGATGAACGATAATTTGTCTGGGAAAATGTCAATCTGTCGCCTCTCTGTAGAGGTCAAAATATAAACGCATGATCAACATGCTGATGAATAATGAAATACATAGAAATATGAAGGCACTCCGGGCAGGTAGCCACTATACTAGCTTAGTTAAATGGACGCTCATACAGAATTCCGAACATGAAATTTAAACACGTCATTAATGTCCAGTAACGAAAGTTCTCTTGGCAAATTTAGTGGAGAGGTCATGCGCAATTATAAATTTATGAACATCATTCGGTCGCAGAGACTTGTAAATTTGTCAAATAAGAAAAGTGTTCTTCGTGAAAATGACATACCAAAATCCCAAGAAGATAGCCTTGCTGGATTCAAACTGATCACTTTCGACTGTGGCTTACGGCGTCGAGCATTATGATTAGAAAGACGCCTACGGCAGCTACGTTTCTTCTCATCAAACTCAGATATGCCATGAAACCTTTGACAATGCAAATATAATTTTTATTCAAGTTGAATTTAAATAATGGCTAATTTTGGAAATATACGATCATGAATATTCAAGATACACATAGATTGTGCTAATAGGAAAAAAGTATATATGTGTTCGGTAAGAAAATACTTTCTGTGCAAAAATTTTGATGGCTAGGAGTTTACCTACTACATTGTTGGCAAAACCGACGCTCTATGCCTCCAATGATGACCTTAGGAGATTTGGAGTGACTTTCACAAACTCTGTGTTTGCGATAGTAATCCTTGACATTCGAAAGATCTATGTTACAACCTTCAACTTGGCAATGAGAGGATGGCGTATTCTGGCACCTTTTTCGAGTAGCTCGGGATTCCATCATAGAAACAGACGGCTTTGTAGCGTTTCCAGCACTGGCATTTTCAAAGTATGCCTGCTTACCAAGCTTCAGACTAAGCATTGGCTCGCAGGAGCAAGTTGAAGTCTCAGATGTTGCATATGTGTTGGCCACTTCAGCCTCAACAAATTCTTTTTTATTGCCAGTATCTTCTAAAGTTGGCTCAAAACCCTCAAGCGTGAATTTGGTTGTTCTACTTTTCTCAATTGACGAGGAACTAATGGTAACTGATTTTGCGCTTTTTGGAGAAGTTTGCTCCAACTCGAAAAAAGGACCACCAGTACTTCTGTCGTCCCCAGCTGAATTGGTAGATCCAAAGTTTATTCCTTGTTTAGTTTGAAAATTAGTTGGATGTAATATATCACCATGCTCAGAAATTCTGGGATGAAGTACAGTTAGATTCTCCCAGTCCCATTGTAAAGGGGGTCTTGCATTCCACTCCATCAATTACAAATGGCTGGGGAAATGTCTCATGCAACTTTTTCCTATCAGGTAATTATAGATCAGCGTCGACTGGCATTTTGGAGAAATCTATTTGGTCACAAAAACAAAAACAGTGTATAGAAAATTCAATTGCATCACAAGAATTGGTGGTCATAGTTAATTTACTGATAAAGACAGATACCACAACTGAGTTAAAAGGCTAAGAAAGAGCAAGACAAGAAATCAGGCAATCAAGAGGAAGCATAACCTTTAATAAATGACAAAAAGGAAGTTGAATTTAATTTTTTTTTTCTTTGAGATCATATTAAAAATACAGAAGGTTGTACTAAATATTCTTTCTTAAAATCAATATGCGTGTTCGATTCCTCTCTCAAACGTGCAGGGATTAATACAGTTGTCGACCACATCCAAGGAGGCCACAGTGAGGCAGGCACAAAAGCAGAAAGATGGGCAAGAAACAGGGAAATGTTTCTATCAGTATTTCTTTTTATGTATATTATATTTAACTTTATTCTAAGAAGAAACCAGGTGCGATTATAAGCAACCAAAGTAGTCAACAGTACTTTTCATTTTAATTACAAAACAGTAAAACACCGTAACTTCCCTTCAAGCTCGTTACAGTTCTTCAGCCACTTACCTTTCTCTTCTAATTGCTTAAAAAGTCTTACAGTTACCTGCAAATCTGTGTTACCGCTTTGCTTTAACTCTACAGTTAATCCTAGCATTCTGAAGAAGCTTGCTTCAAAGCATTCAGAGATACTCCCTTGTTCTGTACCCTCAGAACTACCTAAGGAAAGCACGCATAATAATCGGGTTCCCTTTCTTGAGTCGCTATATAATTCAAAGGCCAGCTATTAACCTCGTATAATGGAAACATGAGAATAGCTGAATTTCTATTGTTCCAAATAAATTCGTGAAAAATTCTAGACCAAAAAATTCGTATAATAAAGATGAGACTATTGACACATTATTGTTCAGCCTAATATGGAAGTGAAGCTAGAAAATTACCGCCTCAAGTTACCACGATTGCCAAGTACCAATCTGATCGACCACGTTCTTTTGGTATTTTTCAGTGTGAAATAAATGCGACTGAGCTAAATTTTCAGAATCCAGAAGGTTTAGGTACGTGCGGTTCCCTTCCTAGGCTCTGGCCAGGTTTTGGAATTTAAGCGTCTTCTTTCATCCCTATCTTCTAGTCTTATCAGAACTATAGGAGCCATTAGCTACGGTAAACCATCAAGGATCAAAAGGAAGATGCGTTGTCTTACTATTTCGGAAGCCGTACTTCTCAAGATAATTGTAGGGAAACTATATGAGGAATGATGAAGAGAAAATACATCGTTTCGCAATCGGTAATGAATGTACGGCCTCATGCTAGCTATATTTCAAGATTTATGTAAAGATATCCAAAACTAAACTGCAAATTCTACAACAACAGCAGCAGCAGCAGATATAGTATCTTCCTGTTCATTTAAACCTAGTCAACAGCAAAATCTTTACATCCAAATCACCAAAAAAACGGAGGAAATCACATATTCGATCATTTCCAAGGCTTCCTAATCTCTCCACTGAGTAAATACTATCTATAACTGAAGGAAATCGAGAAAAACAGACGAAGAATTAGATTCATTCAAAGTCAAACCAGAACGAACATCTGAAAACAAACTAAAAATTCACAAAAAAACTGAATCGAAAGAACCTCTCATAACAACAGTCAACTCGATCACAGAGCGCGAAAAAAACAGAGGAGTGAGATTTGCAGAGGTTACCGAGTTCGTCGGCGGAAGGATTCCGCAGTAGCAGAGCTTGAGGTTGGTTCCGGTCCTTTCGGATATCAAATCATCTCGTTTTCTTCAGTGTTCAGAGGAGTTTGTGTTATGGTGGAGAAGTGCACGTACAACTCCACTGGCAAAAGCTCACGCTGATCACACGCTCCTCTGCCTGCC

mRNA sequence

ATGTCTCAGGTTGATAGCAGAAATTCCTCTGCAGCCAAACGGGCGAGAACTGATGGTAGCCGAAGGGAAGATGACTGGATTTGTACTAGTTGTGGAAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAATTGCACCCAGCCACGTCCTGCCGATCATAATTCTAAATCTGCTGCCAAGCCTGTTCAAGCTCCACAGGGTTACTCATATTCTGCACCTTATATGGGTTCTGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCTTATGGTTCTTCCTTATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACGGAAGCCGATTTTCTGCAGGCAGCCCTTACAGACCTTTGCACCTATCTGGACCTGCACCTTATTCAAGTGGATCTATGATGGGAAATAGTGCAGTGTATGGTATGCCACCCATAATGGATCGCTATGGCATGGCTTTGCCCATGGGCCCTGGTACCATGGGTCCAAGGCCAGGTTTTTTTCCAGATGATATGTCTCAGAAGAAGGGTGCAGACACTACTCGTGACAATGATTGGCCATGCCCAAAATGTGGAAACATCAACTTCTCATTTAGAACAGTCTGTAACATGAGGAAATGCAATACACCAAAGCCTGGGTCACAGGGCTCCAAAAATGACAAAAATTCTAAACAAAAGACGCCAGAGGGTAGCTGGAAGTGTGAGAAATGTAACAACATAAATTATCCATTCCGAACCAAATGCAATAGACAAAATTGTGGAGCCGACAAACCAGCGGATTCAGAGAAATCTCCATCACCAGCACAGGATGAAAATGATCAGTGGATTCCATACTATTTGATTAACAAGATAATTTATGAACCACTTGAAAAGGGGAACCCTTTTGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGAGTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGA

Coding sequence (CDS)

ATGTCTCAGGTTGATAGCAGAAATTCCTCTGCAGCCAAACGGGCGAGAACTGATGGTAGCCGAAGGGAAGATGACTGGATTTGTACTAGTTGTGGAAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAATTGCACCCAGCCACGTCCTGCCGATCATAATTCTAAATCTGCTGCCAAGCCTGTTCAAGCTCCACAGGGTTACTCATATTCTGCACCTTATATGGGTTCTGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCTTATGGTTCTTCCTTATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACGGAAGCCGATTTTCTGCAGGCAGCCCTTACAGACCTTTGCACCTATCTGGACCTGCACCTTATTCAAGTGGATCTATGATGGGAAATAGTGCAGTGTATGGTATGCCACCCATAATGGATCGCTATGGCATGGCTTTGCCCATGGGCCCTGGTACCATGGGTCCAAGGCCAGGTTTTTTTCCAGATGATATGTCTCAGAAGAAGGGTGCAGACACTACTCGTGACAATGATTGGCCATGCCCAAAATGTGGAAACATCAACTTCTCATTTAGAACAGTCTGTAACATGAGGAAATGCAATACACCAAAGCCTGGGTCACAGGGCTCCAAAAATGACAAAAATTCTAAACAAAAGACGCCAGAGGGTAGCTGGAAGTGTGAGAAATGTAACAACATAAATTATCCATTCCGAACCAAATGCAATAGACAAAATTGTGGAGCCGACAAACCAGCGGATTCAGAGAAATCTCCATCACCAGCACAGGATGAAAATGATCAGTGGATTCCATACTATTTGATTAACAAGATAATTTATGAACCACTTGAAAAGGGGAACCCTTTTGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGAGTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGA

Protein sequence

MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFPDDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQWIPYYLINKIIYEPLEKGNPFVSSRTCLRVEKVQSYLPALLNMGV

Homology

[Close]

BLAST of Spg025790 vs. NCBI nr
Match: KAA0034188.1 (ranBP2-type zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 648.3 bits (1671), Expect = 3.6e-182
Identity = 313/332 (94.28%), Postives = 320/332 (96.39%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDW C SCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYG+PPIMDRYGMALPMGPG MGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKNSKQKTPE 240
           D+MSQKKGADTTRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ SKNDK+SKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQWIPYYLINKIIYEPL 300
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQ+ENDQWIPY LINKI+ E  
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQWIPYNLINKIMNESH 300

Query: 301 EKG--NPFVSSRTCLRVEKVQSYLPALLNMGV 331
           EKG  NPFVSSRTCLRVEKVQ YLPALLNMGV
Sbjct: 301 EKGNRNPFVSSRTCLRVEKVQIYLPALLNMGV 332

[Close]

BLAST of Spg025790 vs. NCBI nr
Match: KAG7032363.1 (RanBP2-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 620.9 bits (1600), Expect = 6.2e-174
Identity = 313/376 (83.24%), Postives = 317/376 (84.31%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60
           MSQVDSRNSSAAKRARTDGSRREDDW C SCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPYL 60

Query: 61  ------KSAAKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSG 120
                 KSAAKPVQA QGYSYSAPYMGSG PSSMYPGVPPYGSS+FNGSSIPPYDVPFSG
Sbjct: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNS----------AVYGMPPIMDRY 180
           GSAYHYNYGSRFSAGSPYRPLHLSGP PYSSGSMMGNS          AVYGMPPIMDRY
Sbjct: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGMPPIMDRY 180

Query: 181 GMALPMGPGTMGPRPGFFPDDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTP 240
           GMALPMGPGTMGPRPGFFPDDMSQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTP
Sbjct: 181 GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240

Query: 241 KPGSQGSKNDKNSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQD 300
           KPGSQGSKNDK +KQKTPEGSWKCEKCNNINYPFR KCNRQNCGADKPA SEKS SPAQ+
Sbjct: 241 KPGSQGSKNDKTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQE 300

Query: 301 ENDQ---------------------------WIPYYLINKIIYEPLEKGNPFVSSRTCLR 331
           ENDQ                           WIP+ LINKIIYEPLEKG PFVSSRTCLR
Sbjct: 301 ENDQVCCVSFCISVCCLQLIVLFFRYVCIMKWIPHNLINKIIYEPLEKGYPFVSSRTCLR 360

[Close]

BLAST of Spg025790 vs. NCBI nr
Match: XP_023518420.1 (ranBP2-type zinc finger protein At1g67325 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 590.1 bits (1520), Expect = 1.2e-164
Identity = 289/333 (86.79%), Postives = 293/333 (87.99%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDW C SCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQA QGYSYSAPYMGSG PSSMYPGVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP 180
           SRFSAGSPYRPLHLSGP PYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPPPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKNSKQKTPE 240
           DDMSQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDK +KQKTPE
Sbjct: 181 DDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKTTKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ--------------- 300
           GSWKCEKCNNINYPFR KCNRQNCGADKPA SEKS SPAQ+ENDQ               
Sbjct: 241 GSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQVCCVSFCISVCCLQL 300

Query: 301 ------------WIPYYLINKIIYEPLEKGNPF 307
                       WIP+ LINKIIYEPLEKG PF
Sbjct: 301 IVLFFRYVCIMKWIPHNLINKIIYEPLEKGYPF 333

[Close]

BLAST of Spg025790 vs. NCBI nr
Match: XP_022957472.1 (ranBP2-type zinc finger protein At1g67325 isoform X1 [Cucurbita moschata])

HSP 1 Score: 587.8 bits (1514), Expect = 5.8e-164
Identity = 288/333 (86.49%), Postives = 292/333 (87.69%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDW C SCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQA QGYSYSAPYMGSG PSSMYPGVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP 180
           SR SAGSPYRPLHLSGP PYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP
Sbjct: 121 SRLSAGSPYRPLHLSGPPPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKNSKQKTPE 240
           DDMSQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDK +KQKTPE
Sbjct: 181 DDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKTTKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ--------------- 300
           GSWKCEKCNNINYPFR KCNRQNCGADKPA SEKS SPAQ+ENDQ               
Sbjct: 241 GSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQVCCVSFCISVCCLQL 300

Query: 301 ------------WIPYYLINKIIYEPLEKGNPF 307
                       WIP+ LINKIIYEPLEKG PF
Sbjct: 301 IVLFFRYVCIMKWIPHNLINKIIYEPLEKGYPF 333

[Close]

BLAST of Spg025790 vs. NCBI nr
Match: XP_022998189.1 (ranBP2-type zinc finger protein At1g67325 isoform X1 [Cucurbita maxima])

HSP 1 Score: 585.9 bits (1509), Expect = 2.2e-163
Identity = 287/333 (86.19%), Postives = 292/333 (87.69%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDW C SCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQA QGYSYSAPYMGSG PSSMYPGVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP 180
           SRFSAGSPYRPLHLSGP PYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGT+GPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPPPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTLGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKNSKQKTPE 240
           DDMSQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDK +KQKTPE
Sbjct: 181 DDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKTTKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ--------------- 300
           GSWKCEKCNNINYPFR KCNRQNCGADKPA SEKS SPAQ+ENDQ               
Sbjct: 241 GSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQVCCVNFCIFVFCLQL 300

Query: 301 ------------WIPYYLINKIIYEPLEKGNPF 307
                       WI + LINKIIYEPLEKG PF
Sbjct: 301 IVLFFRYVCIMKWISHNLINKIIYEPLEKGYPF 333

[Close]

BLAST of Spg025790 vs. ExPASy Swiss-Prot
Match: Q8GZ43 (RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana OX=3702 GN=At1g67325 PE=1 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 3.1e-120
Identity = 212/290 (73.10%), Postives = 236/290 (81.38%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDG RREDDWIC SCGNVNFSFRTTCNMRNCTQPRPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    Y+GSG P  +Y G  PYGS LFNGSS+PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGT---MGPRPG 180
           SR  AG+ YRPLH+SGP PY  GSMMG+  +YGMPP +DRYG+ + MGPG+   M PRP 
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFPDDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGS-QGSKNDKNSKQ 240
           F+PD+ SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGS QG  +DK SKQ
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQ 240

Query: 241 KTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQDENDQ 286
             PEGSWKC+ C NINYPFR+KCNRQNCGADKP D S  SPS A +ENDQ
Sbjct: 241 NAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

[Close]

BLAST of Spg025790 vs. ExPASy Swiss-Prot
Match: Q9AST1 (Transcription initiation factor TFIID subunit 15 OS=Arabidopsis thaliana OX=3702 GN=TAF15 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.8e-06
Identity = 37/105 (35.24%), Postives = 49/105 (46.67%), Query Frame = 0


Query: 193 RDNDWPCP--KCGNINFSFRTVCNMRKCNTPKP-----GSQGSKN--------DKNSKQK 252
           +D DW CP   C N+NF+FR VCN  +C T +P     GS G+          D  +  K
Sbjct: 135 QDGDWMCPNTSCTNVNFAFRGVCN--RCGTARPAGASGGSMGAGRGRGRGGGADGGAPGK 194

Query: 253 TPEGS---------WKCEKCNNINYPFRTKCNRQNCGADKPADSE 274
            P G+         W C  C N+N+  R KCN   C  +KP  +E
Sbjct: 195 QPSGAPTGLFGPNDWACPMCGNVNWAKRLKCN--ICNTNKPGQNE 235

[Close]

BLAST of Spg025790 vs. ExPASy TrEMBL
Match: A0A5A7SU69 (RanBP2-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001830 PE=4 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 1.8e-182
Identity = 313/332 (94.28%), Postives = 320/332 (96.39%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDW C SCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYG+PPIMDRYGMALPMGPG MGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKNSKQKTPE 240
           D+MSQKKGADTTRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ SKNDK+SKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQWIPYYLINKIIYEPL 300
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQ+ENDQWIPY LINKI+ E  
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQWIPYNLINKIMNESH 300

Query: 301 EKG--NPFVSSRTCLRVEKVQSYLPALLNMGV 331
           EKG  NPFVSSRTCLRVEKVQ YLPALLNMGV
Sbjct: 301 EKGNRNPFVSSRTCLRVEKVQIYLPALLNMGV 332

[Close]

BLAST of Spg025790 vs. ExPASy TrEMBL
Match: A0A6J1GZ81 (ranBP2-type zinc finger protein At1g67325 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458861 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 2.8e-164
Identity = 288/333 (86.49%), Postives = 292/333 (87.69%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDW C SCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQA QGYSYSAPYMGSG PSSMYPGVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP 180
           SR SAGSPYRPLHLSGP PYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP
Sbjct: 121 SRLSAGSPYRPLHLSGPPPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKNSKQKTPE 240
           DDMSQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDK +KQKTPE
Sbjct: 181 DDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKTTKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ--------------- 300
           GSWKCEKCNNINYPFR KCNRQNCGADKPA SEKS SPAQ+ENDQ               
Sbjct: 241 GSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQVCCVSFCISVCCLQL 300

Query: 301 ------------WIPYYLINKIIYEPLEKGNPF 307
                       WIP+ LINKIIYEPLEKG PF
Sbjct: 301 IVLFFRYVCIMKWIPHNLINKIIYEPLEKGYPF 333

[Close]

BLAST of Spg025790 vs. ExPASy TrEMBL
Match: A0A6J1KDP3 (ranBP2-type zinc finger protein At1g67325 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492911 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 1.1e-163
Identity = 287/333 (86.19%), Postives = 292/333 (87.69%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDW C SCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQA QGYSYSAPYMGSG PSSMYPGVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP 180
           SRFSAGSPYRPLHLSGP PYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGT+GPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPPPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTLGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKNSKQKTPE 240
           DDMSQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDK +KQKTPE
Sbjct: 181 DDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKTTKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ--------------- 300
           GSWKCEKCNNINYPFR KCNRQNCGADKPA SEKS SPAQ+ENDQ               
Sbjct: 241 GSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQVCCVNFCIFVFCLQL 300

Query: 301 ------------WIPYYLINKIIYEPLEKGNPF 307
                       WI + LINKIIYEPLEKG PF
Sbjct: 301 IVLFFRYVCIMKWISHNLINKIIYEPLEKGYPF 333

[Close]

BLAST of Spg025790 vs. ExPASy TrEMBL
Match: A0A5D3CW31 (RanBP2-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002320 PE=4 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 1.9e-160
Identity = 274/285 (96.14%), Postives = 280/285 (98.25%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDW C SCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYG+PPIMDRYGMALPMGPG MGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKNSKQKTPE 240
           D+MSQKKGADTTRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ SKNDK+SKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQ+ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of Spg025790 vs. ExPASy TrEMBL
Match: A0A0A0KPV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589330 PE=4 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 1.9e-160
Identity = 274/285 (96.14%), Postives = 280/285 (98.25%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDW C SCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYG+PPIMDRYGMALPMGPG MGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKNSKQKTPE 240
           D+MSQKKGADTTRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ SKNDK+SKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQDENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQ+ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of Spg025790 vs. TAIR 10
Match: AT1G67325.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 437.6 bits (1124), Expect = 9.1e-123
Identity = 212/289 (73.36%), Postives = 236/289 (81.66%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDG RREDDWIC SCGNVNFSFRTTCNMRNCTQPRPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    Y+GSG P  +Y G  PYGS LFNGSS+PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGT---MGPRPG 180
           SR  AG+ YRPLH+SGP PY  GSMMG+  +YGMPP +DRYG+ + MGPG+   M PRP 
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFPDDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKNSKQK 240
           F+PD+ SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGSQG  +DK SKQ 
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQGGSSDKISKQN 240

Query: 241 TPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQDENDQ 286
            PEGSWKC+ C NINYPFR+KCNRQNCGADKP D S  SPS A +ENDQ
Sbjct: 241 APEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 287

[Close]

BLAST of Spg025790 vs. TAIR 10
Match: AT1G67325.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 433.0 bits (1112), Expect = 2.2e-121
Identity = 212/290 (73.10%), Postives = 236/290 (81.38%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWICTSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDG RREDDWIC SCGNVNFSFRTTCNMRNCTQPRPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    Y+GSG P  +Y G  PYGS LFNGSS+PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGT---MGPRPG 180
           SR  AG+ YRPLH+SGP PY  GSMMG+  +YGMPP +DRYG+ + MGPG+   M PRP 
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFPDDMSQKKGADTTRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGS-QGSKNDKNSKQ 240
           F+PD+ SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGS QG  +DK SKQ
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQ 240

Query: 241 KTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQDENDQ 286
             PEGSWKC+ C NINYPFR+KCNRQNCGADKP D S  SPS A +ENDQ
Sbjct: 241 NAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

[Close]

BLAST of Spg025790 vs. TAIR 10
Match: AT1G50300.1 (TBP-associated factor 15 )

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-07
Identity = 37/105 (35.24%), Postives = 49/105 (46.67%), Query Frame = 0


Query: 193 RDNDWPCP--KCGNINFSFRTVCNMRKCNTPKP-----GSQGSKN--------DKNSKQK 252
           +D DW CP   C N+NF+FR VCN  +C T +P     GS G+          D  +  K
Sbjct: 135 QDGDWMCPNTSCTNVNFAFRGVCN--RCGTARPAGASGGSMGAGRGRGRGGGADGGAPGK 194

Query: 253 TPEGS---------WKCEKCNNINYPFRTKCNRQNCGADKPADSE 274
            P G+         W C  C N+N+  R KCN   C  +KP  +E
Sbjct: 195 QPSGAPTGLFGPNDWACPMCGNVNWAKRLKCN--ICNTNKPGQNE 235

The following BLAST results are available for this feature:

BLAST of Spg025790 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034188.1	3.6e-182	94.28	ranBP2-type zinc finger protein [Cucumis melo var. makuwa]	[more]
KAG7032363.1	6.2e-174	83.24	RanBP2-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023518420.1	1.2e-164	86.79	ranBP2-type zinc finger protein At1g67325 isoform X1 [Cucurbita pepo subsp. pepo...	[more]
XP_022957472.1	5.8e-164	86.49	ranBP2-type zinc finger protein At1g67325 isoform X1 [Cucurbita moschata]	[more]
XP_022998189.1	2.2e-163	86.19	ranBP2-type zinc finger protein At1g67325 isoform X1 [Cucurbita maxima]	[more]

BLAST of Spg025790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GZ43	3.1e-120	73.10	RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
Q9AST1	1.8e-06	35.24	Transcription initiation factor TFIID subunit 15 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Spg025790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SU69	1.8e-182	94.28	RanBP2-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A6J1GZ81	2.8e-164	86.49	ranBP2-type zinc finger protein At1g67325 isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1KDP3	1.1e-163	86.19	ranBP2-type zinc finger protein At1g67325 isoform X1 OS=Cucurbita maxima OX=3661...	[more]
A0A5D3CW31	1.9e-160	96.14	RanBP2-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KPV4	1.9e-160	96.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589330 PE=4 SV=1	[more]

BLAST of Spg025790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67325.1	9.1e-123	73.36	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G67325.2	2.2e-121	73.10	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G50300.1	1.3e-07	35.24	TBP-associated factor 15	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 195..221 e-value: 2.1E-4 score: 30.6 coord: 241..267 e-value: 1.1E-4 score: 31.6 coord: 24..50 e-value: 0.021 score: 24.0
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 194..223 e-value: 2.4E-5 score: 23.5 coord: 239..269 e-value: 1.9E-6 score: 27.1 coord: 22..44 e-value: 3.6E-6 score: 26.2
None	No IPR available	GENE3D	4.10.1060.10		coord: 14..54 e-value: 1.2E-10 score: 42.4 coord: 184..225 e-value: 6.5E-11 score: 43.3 coord: 227..271 e-value: 2.4E-8 score: 35.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 5..290
None	No IPR available	PANTHER	PTHR23111:SF35	OS08G0521400 PROTEIN	coord: 5..290
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 188..225
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 17..54
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 232..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025790.1	Spg025790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding