Spg025771 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025771
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold13: 27703608 .. 27705316 (-)
RNA-Seq Expression	Spg025771
Synteny	Spg025771

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAAGAAGAAAAGAGGCTGAAGACTTCCTTGCAGCCTTTGAGCCATTGCACAAGGCTCAAACTGAGGCTGATTTGCTGCAAGGTAGAGAAGAAGAGGCCCTTGAGGGGCCAAATGAAGAAAATCCAAAAACAAAAGAAGAAAACAAATGAAGGGAATGAAGGACAGAATGCGACCACATTTGGGCCGCATTTTGAAAAAGGCCAGGATAAGGCCACTAATGAACAACCAACTAATGAGGTTTTCGAACCTCTATTCAAATATGATCCACCAGTAGTTGATAGCACCTCTTCGGGAGAGAAGAGAAATGAAGAAGAGATTGAAAACAAGGAGGCCGAGACCTCCAGTAATTTAGAAACATAATCCGATTCAGAAATCAAGGAATTGGATGACGACTAAGTTCCTATCTCTGGAGCATTGAGAAAAAAGAGAATAAGAGAGATTAGGGCCGAAAGGAGGACCAAGAACAAGAATGACCCCATATTTGCCAAGAGGCCGAGGATTAAGTCCATGGACCCCTCTCCTGCAACTCCTCCAACCATCTCACCTGCCAAGTCAAAAGCCAAATCACATAAGACTTCATCTCCTAAAAATCCACTCCCAGAAGTCTTCAAAGATGTCAATTTTCAAGAACGGATGAAGATTATGAGAAAAAGAGATTTCCTCAACGAGAAGGGATTCTCTAATAGAGTGGGAACACTGCCAAAGTTCGTAACTAGAGTTATCTCAAAGTACAAGTGGTAGGAGTTCTGTGCTCACCCTCAGGAGGCTGTAGTACCTTTAGTTCGAGAATTTTACGCCGGACTAAGGGAGGAAAGCATGAGTATGGCAGTGGTGAGAGGTAAGATGGTCAGCTTCTCTTCTGTTGACATCAACCGGGTGTATAGAACCAAAACACCCTTACATCCAAGAGGGAACAATGCCATAAAGAACCCCTCGGCCAAACGAATGAAAGAAGCGCTGAAATTAGTGGCCAACAAGGGTGTTTAGTGGAAAGAATCCCAAACGAAGGTGAAGACATTAGTGCCAAGCGATCTCAAGCCAGAATCGGTAGTGTGGCTTCACTTTCTCAAGAACAGGTTGATGCCAACAACCCATGATAGCACAATTTCAGTAGAGAGAGTTATGCTCCTCTACAGTATTATGAAGGGTTTGGAAATCAACATTGGGAGCATTATCAAGGAGGAAATCCTTGCCTGTGGAAGGAAAAAAATAGGGTTGGGTAATTGATCACCCAACTATGTCAGAGGGTGAAGATAGTCCCTGGTAAGGATGAGGAGCGTCACTTCTTCAGGCCTACCATTGACCTATCATTGATCGGGAAGCTTCAACAGAATAACATCCAAAGAAAAGACAAAGTTTCCACATCTCAAGCCACTCCACCATCAGGGCTGAATCCGACTTCTCCACCTCAACACACTCCTTTTTCAGGTCCCTCACCATCATCTGAAGCCCTAGCAGTTGCTACCAACAACTGGATCAAATCAGGGACAACCCGAGAACTTATTGGGCATATGCCAAGGAGAGAGATGAAGCCATTAGAAAGTTCTACCTCTCTATCGCCCCAAGTATTGCTCCTGTCTTTCCTGATTTCCCTCAATCGCTTCTGTCTCAAGAAGATAAGGATTCTGATGATGATGAAGAAGATGAAAATGAAGATCAAGAAAGAGAGAGTTCCTCAGATGAGGACTAGGGGAGTTTTCTGA

mRNA sequence

ATGAGAAAAGAAGAAAAGAGGCTGAAGACTTCCTTGCAGCCTTTGAGCCATTGCACAAGGCTCAAACTGAGGCTGATTTGCTGCAAGGTAGAGAAGAAGAGGCCCTTGAGGGGCCAAATGAAGAAAATCCAAAAACAAAAGAAGAAAACAAATGAAGGGAATGAAGGACAGAATGCGACCACATTTGGGCCGCATTTTGAAAAAGGCCAGGATAAGGCCACTAATGAACAACCAACTAATGAGGTTTTCGAACCTCTATTCAAATATGATCCACCAGTAGTTGATAGCACCTCTTCGGGAGAGAAGAGAAATGAAGAAGAGATTGAAAACAAGGAGGCCGAGACCTCCATGGAAAGAATCCCAAACGAAGGTGAAGACATTAGTGCCAAGCGATCTCAAGCCAGAATCGGTAGTGTGGCTTCACTTTCTCAAGAACAGAGGGTGAAGATAGTCCCTGGTAAGGATGAGGAGCGTCACTTCTTCAGGCCTACCATTGACCTATCATTGATCGGGAAGCTTCAACAGAATAACATCCAAAGAAAAGACAAAGTTTCCACATCTCAAGCCACTCCACCATCAGGGCTGAATCCGACTTCTCCACCTCAACACACTCCTTTTTCAGGTCCCTCACCATCATCTGAAGCCCTAGCAGTTGCTACCAACAACTGGATCAAATCAGGGACAACCCGAGAACTTATTGGGCATATGCCAAGGAGAGAGATGAAGCCATTAGAAAGTTCTACCTCTCTATCGCCCCAAGTATTGCTCCTGTCTTTCCTGATTTCCCTCAATCGCTTCTGTCTCAAGAAGATAAGGATTCTGATGATGATGAAGAAGATGAAAATGAAGATCAAGAAAGAGAGAGTTCCTCAGATGAGGACTAGGGGAGTTTTCTGA

Coding sequence (CDS)

ATGAGAAAAGAAGAAAAGAGGCTGAAGACTTCCTTGCAGCCTTTGAGCCATTGCACAAGGCTCAAACTGAGGCTGATTTGCTGCAAGGTAGAGAAGAAGAGGCCCTTGAGGGGCCAAATGAAGAAAATCCAAAAACAAAAGAAGAAAACAAATGAAGGGAATGAAGGACAGAATGCGACCACATTTGGGCCGCATTTTGAAAAAGGCCAGGATAAGGCCACTAATGAACAACCAACTAATGAGGTTTTCGAACCTCTATTCAAATATGATCCACCAGTAGTTGATAGCACCTCTTCGGGAGAGAAGAGAAATGAAGAAGAGATTGAAAACAAGGAGGCCGAGACCTCCATGGAAAGAATCCCAAACGAAGGTGAAGACATTAGTGCCAAGCGATCTCAAGCCAGAATCGGTAGTGTGGCTTCACTTTCTCAAGAACAGAGGGTGAAGATAGTCCCTGGTAAGGATGAGGAGCGTCACTTCTTCAGGCCTACCATTGACCTATCATTGATCGGGAAGCTTCAACAGAATAACATCCAAAGAAAAGACAAAGTTTCCACATCTCAAGCCACTCCACCATCAGGGCTGAATCCGACTTCTCCACCTCAACACACTCCTTTTTCAGGTCCCTCACCATCATCTGAAGCCCTAGCAGTTGCTACCAACAACTGGATCAAATCAGGGACAACCCGAGAACTTATTGGGCATATGCCAAGGAGAGAGATGAAGCCATTAGAAAGTTCTACCTCTCTATCGCCCCAAGTATTGCTCCTGTCTTTCCTGATTTCCCTCAATCGCTTCTGTCTCAAGAAGATAAGGATTCTGATGATGATGAAGAAGATGAAAATGAAGATCAAGAAAGAGAGAGTTCCTCAGATGAGGACTAGGGGAGTTTTCTGA

Protein sequence

MRKEEKRLKTSLQPLSHCTRLKLRLICCKVEKKRPLRGQMKKIQKQKKKTNEGNEGQNATTFGPHFEKGQDKATNEQPTNEVFEPLFKYDPPVVDSTSSGEKRNEEEIENKEAETSMERIPNEGEDISAKRSQARIGSVASLSQEQRVKIVPGKDEERHFFRPTIDLSLIGKLQQNNIQRKDKVSTSQATPPSGLNPTSPPQHTPFSGPSPSSEALAVATNNWIKSGTTRELIGHMPRREMKPLESSTSLSPQVLLLSFLISLNRFCLKKIRILMMMKKMKMKIKKERVPQMRTRGVF

Homology

The following BLAST results are available for this feature:

BLAST of Spg025771 vs.


Match Name	E-value	Identity	Description

BLAST of Spg025771 vs.


Match Name	E-value	Identity	Description

BLAST of Spg025771 vs.


Match Name	E-value	Identity	Description

BLAST of Spg025771 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025771.1	Spg025771.1	mRNA