Spg024340 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024340
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	major pollen allergen Ole e 6-like
Location	scaffold4: 16749814 .. 16750221 (+)
RNA-Seq Expression	Spg024340
Synteny	Spg024340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGCAGTGTTTCTGTTGAGCATTGTTGTGATGGCTACAGTGCAGGTTTCCAGTGCCAATGATGACGATGGCGACATTTGGCCTCTTCATCAAGCTGGTGTTGATGCCGTTCCCAAGGAGAAGGAGGCCAAATTCGAGGCTAAATTTGATGCCAAGTACAAGTCTTGCTATGAAAATTGCCTCAAGGAATGTCTCGTAAAAGACAGTGAAAGCTTCTGTGAAGTCAAATGTGATGAAGATTGCAGTGATAAGGAAGTTGCTGGTACTCTCTCTTCTCTCCCTATCTCTCTTTAATTTTCTTATGGAGAACCAATGTATATATGCTTTATTTTTTTTAATTTTGAAATATTAATTTAAATTGTTGTTTATTTTACAGATAAGCTGGATATTAAAATACCATATTAA

mRNA sequence

ATGATTGCAGTGTTTCTGTTGAGCATTGTTGTGATGGCTACAGTGCAGGTTTCCAGTGCCAATGATGACGATGGCGACATTTGGCCTCTTCATCAAGCTGGTGTTGATGCCGTTCCCAAGGAGAAGGAGGCCAAATTCGAGGCTAAATTTGATGCCAAGTACAAGTCTTGCTATGAAAATTGCCTCAAGGAATGTCTCGTAAAAGACAGTGAAAGCTTCTGTGAAGTCAAATGTGATGAAGATTGCAGTGATAAGGAAGTTGCTGATAAGCTGGATATTAAAATACCATATTAA

Coding sequence (CDS)

ATGATTGCAGTGTTTCTGTTGAGCATTGTTGTGATGGCTACAGTGCAGGTTTCCAGTGCCAATGATGACGATGGCGACATTTGGCCTCTTCATCAAGCTGGTGTTGATGCCGTTCCCAAGGAGAAGGAGGCCAAATTCGAGGCTAAATTTGATGCCAAGTACAAGTCTTGCTATGAAAATTGCCTCAAGGAATGTCTCGTAAAAGACAGTGAAAGCTTCTGTGAAGTCAAATGTGATGAAGATTGCAGTGATAAGGAAGTTGCTGATAAGCTGGATATTAAAATACCATATTAA

Protein sequence

MIAVFLLSIVVMATVQVSSANDDDGDIWPLHQAGVDAVPKEKEAKFEAKFDAKYKSCYENCLKECLVKDSESFCEVKCDEDCSDKEVADKLDIKIPY

Homology

[Close]

BLAST of Spg024340 vs. NCBI nr
Match: KGN46520.1 (hypothetical protein Csa_005728 [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 7.0e-17
Identity = 55/97 (56.70%), Postives = 66/97 (68.04%), Query Frame = 0


Query: 1  MIAVFLLSIVVMATVQVSSANDDDGDIWPLHQAGVDAVPKEKEAKFEAKFDAKYKSCYEN 60
          M+AVFL+ IVV+AT+Q   AN++DG                   K+EAKFDAKYKSCYE 
Sbjct: 5  MMAVFLMCIVVVATLQFVMANEEDG-----------------VTKYEAKFDAKYKSCYET 64

Query: 61 CLKECLVKDS--ESFCEVKCDEDCSDKEVADKLDIKI 96
          C KECL  D+  ESFCEVKCDEDCS+KE ADKL I++
Sbjct: 65 CEKECLRNDTNGESFCEVKCDEDCSEKEAADKLHIEL 84

[Close]

BLAST of Spg024340 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 95.1 bits (235), Expect = 3.5e-16
Identity = 53/96 (55.21%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 1  MIAVFLLSIVVMATVQVSSANDDDGDIWPLHQAGVDAVPKEKEAKFEAKFDAKYKSCYEN 60
          M+AVFL+ IVV+A +Q ++AN+D+                    K+EAKFDAKYKSCYE 
Sbjct: 5  MMAVFLMCIVVVAALQFATANEDE------------------VTKYEAKFDAKYKSCYET 64

Query: 61 CLKECLVKDS-ESFCEVKCDEDCSDKEVADKLDIKI 96
          C KECL   S +SFCEVKCDEDC +KEVADKL IK+
Sbjct: 65 CEKECLANGSGQSFCEVKCDEDCDEKEVADKLHIKL 82

[Close]

BLAST of Spg024340 vs. NCBI nr
Match: XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 95.1 bits (235), Expect = 3.5e-16
Identity = 55/95 (57.89%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 1  MIAVFLLSIVVMATVQVSSANDDDGDIWPLHQAGVDAVPKEKEAKFEAKFDAKYKSCYEN 60
          MIAVFL+ IVVMA +Q ++AN                   E+ AK+EAKFDAKYKSCYE 
Sbjct: 5  MIAVFLMCIVVMAALQFTTAN-------------------EEVAKYEAKFDAKYKSCYET 64

Query: 61 CLKECLVK-DSESFCEVKCDEDCSDKEVADKLDIK 95
          C KECL K + +SFCEVKCDEDC +KE ADKL IK
Sbjct: 65 CEKECLEKGNGQSFCEVKCDEDCDEKETADKLHIK 80

[Close]

BLAST of Spg024340 vs. NCBI nr
Match: KAG6575284.1 (Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG6575286.1 Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 94.7 bits (234), Expect = 4.5e-16
Identity = 54/96 (56.25%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 1  MIAVFLLSIVVMATVQVSSANDDDGDIWPLHQAGVDAVPKEKEAKFEAKFDAKYKSCYEN 60
          MIAV L+ IVV+A +QVSSA +                   KEAK+EAKF+AKY+SCYE 
Sbjct: 5  MIAVLLVCIVVVAALQVSSATE-----------------SAKEAKYEAKFEAKYRSCYEK 64

Query: 61 CLKECLVK-DSESFCEVKCDEDCSDKEVADKLDIKI 96
          C KECL K + +SFCEVKCDEDC +KE ADKL IK+
Sbjct: 65 CEKECLEKGNGQSFCEVKCDEDCDEKETADKLHIKV 83

[Close]

BLAST of Spg024340 vs. NCBI nr
Match: XP_022992458.1 (major pollen allergen Ole e 6-like [Cucurbita maxima] >XP_022992459.1 major pollen allergen Ole e 6-like [Cucurbita maxima])

HSP 1 Score: 93.6 bits (231), Expect = 1.0e-15
Identity = 54/96 (56.25%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 1  MIAVFLLSIVVMATVQVSSANDDDGDIWPLHQAGVDAVPKEKEAKFEAKFDAKYKSCYEN 60
          MIAV L+ IVVMA +QVSSA +                   KEAK+EAKF+AKY+ CYE 
Sbjct: 5  MIAVLLVCIVVMAALQVSSATE-----------------SVKEAKYEAKFEAKYRLCYEK 64

Query: 61 CLKECLVK-DSESFCEVKCDEDCSDKEVADKLDIKI 96
          C KECL K + +SFCEVKCDEDC +KE ADKL IK+
Sbjct: 65 CEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV 83

[Close]

BLAST of Spg024340 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.9e-05
Identity = 22/43 (51.16%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 51 DAKYKSCYENCLKECLVK-DSESFCEVKCDEDCSDKEVADKLD 93
          +A++K CY+ C KEC  K +  +FCE+KCD DCS K+V +KL+
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKLE 44

[Close]

BLAST of Spg024340 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.4e-17
Identity = 55/97 (56.70%), Postives = 66/97 (68.04%), Query Frame = 0


Query: 1  MIAVFLLSIVVMATVQVSSANDDDGDIWPLHQAGVDAVPKEKEAKFEAKFDAKYKSCYEN 60
          M+AVFL+ IVV+AT+Q   AN++DG                   K+EAKFDAKYKSCYE 
Sbjct: 5  MMAVFLMCIVVVATLQFVMANEEDG-----------------VTKYEAKFDAKYKSCYET 64

Query: 61 CLKECLVKDS--ESFCEVKCDEDCSDKEVADKLDIKI 96
          C KECL  D+  ESFCEVKCDEDCS+KE ADKL I++
Sbjct: 65 CEKECLRNDTNGESFCEVKCDEDCSEKEAADKLHIEL 84

[Close]

BLAST of Spg024340 vs. ExPASy TrEMBL
Match: A0A6J1JXL5 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.9e-16
Identity = 54/96 (56.25%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 1  MIAVFLLSIVVMATVQVSSANDDDGDIWPLHQAGVDAVPKEKEAKFEAKFDAKYKSCYEN 60
          MIAV L+ IVVMA +QVSSA +                   KEAK+EAKF+AKY+ CYE 
Sbjct: 5  MIAVLLVCIVVMAALQVSSATE-----------------SVKEAKYEAKFEAKYRLCYEK 64

Query: 61 CLKECLVK-DSESFCEVKCDEDCSDKEVADKLDIKI 96
          C KECL K + +SFCEVKCDEDC +KE ADKL IK+
Sbjct: 65 CEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV 83

[Close]

BLAST of Spg024340 vs. ExPASy TrEMBL
Match: A0A6J1JVQ4 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488292 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.9e-16
Identity = 54/96 (56.25%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 1  MIAVFLLSIVVMATVQVSSANDDDGDIWPLHQAGVDAVPKEKEAKFEAKFDAKYKSCYEN 60
          +IAV L+ IVVMA +QVSSA +                   KEAK+EAKF+AKY+ CYE 
Sbjct: 5  IIAVLLVCIVVMAALQVSSATE-----------------SVKEAKYEAKFEAKYRLCYEK 64

Query: 61 CLKECLVK-DSESFCEVKCDEDCSDKEVADKLDIKI 96
          C KECL K + +SFCEVKCDEDC +KEVADKL IK+
Sbjct: 65 CEKECLEKGNDQSFCEVKCDEDCDEKEVADKLHIKV 83

[Close]

BLAST of Spg024340 vs. ExPASy TrEMBL
Match: A0A6J1JWQ7 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488152 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.9e-16
Identity = 54/96 (56.25%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 1  MIAVFLLSIVVMATVQVSSANDDDGDIWPLHQAGVDAVPKEKEAKFEAKFDAKYKSCYEN 60
          MIAV L+ IVVMA +QVSSA +                   KEAK+EAKF+AKY+ CYE 
Sbjct: 1  MIAVLLVCIVVMAALQVSSATE-----------------SVKEAKYEAKFEAKYRLCYEK 60

Query: 61 CLKECLVK-DSESFCEVKCDEDCSDKEVADKLDIKI 96
          C KECL K + +SFCEVKCDEDC +KE ADKL IK+
Sbjct: 61 CEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV 79

[Close]

BLAST of Spg024340 vs. ExPASy TrEMBL
Match: A0A6J1EQ21 (major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.1e-15
Identity = 53/96 (55.21%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 1  MIAVFLLSIVVMATVQVSSANDDDGDIWPLHQAGVDAVPKEKEAKFEAKFDAKYKSCYEN 60
          MIAV L+ IVV+A +QVSSA +                   KEAK+EAKF+AKY+ CYE 
Sbjct: 5  MIAVLLVCIVVVAALQVSSATE-----------------SAKEAKYEAKFEAKYRLCYEK 64

Query: 61 CLKECLVK-DSESFCEVKCDEDCSDKEVADKLDIKI 96
          C KECL K + +SFCEVKCDEDC +KE ADKL IK+
Sbjct: 65 CEKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV 83

The following BLAST results are available for this feature:

BLAST of Spg024340 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46520.1	7.0e-17	56.70	hypothetical protein Csa_005728 [Cucumis sativus]	[more]
XP_038891517.1	3.5e-16	55.21	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038906682.1	3.5e-16	57.89	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
KAG6575284.1	4.5e-16	56.25	Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_022992458.1	1.0e-15	56.25	major pollen allergen Ole e 6-like [Cucurbita maxima] >XP_022992459.1 major poll...	[more]

BLAST of Spg024340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24172	4.9e-05	51.16	Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1	[more]

BLAST of Spg024340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9Z9	3.4e-17	56.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1	[more]
A0A6J1JXL5	4.9e-16	56.25	major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 P...	[more]
A0A6J1JVQ4	4.9e-16	56.25	major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488292 P...	[more]
A0A6J1JWQ7	4.9e-16	56.25	major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488152 P...	[more]
A0A6J1EQ21	1.1e-15	55.21	major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354...	[more]

BLAST of Spg024340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole_e_6	coord: 57..91 e-value: 1.2E-7 score: 31.6
IPR015333	Pollen allergen ole e 6	PANTHER	PTHR35632	MAJOR POLLEN ALLERGEN OLE E 6-LIKE	coord: 1..95
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 51..95 e-value: 1.3E-12 score: 49.0
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 51..92
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024340.1	Spg024340.1	mRNA