Spg024311 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024311
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ULP_PROTEASE domain-containing protein
Location	scaffold4: 22561363 .. 22561809 (-)
RNA-Seq Expression	Spg024311
Synteny	Spg024311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGAATTTTGCTTGATGGAGGAATTAGCAAGCACTGTTATGACAATTTATATCGCGTAAGTAACATTTACTTTAACAAATTGTCATTAATTTTCTTTCGTCTTTAATACTAATATGAATTTATTTTGCTTTTAGATACCTATGCGAGTTTGACCCATCCATCTTAGAGCAATATGCATTTCTACATCCAGCATTGATCTTAGTTGGCTCGGGATCTGAAGAGAGCCGCTCTCAAGTCCTATGTAAAAGGTTAAGACAGGTCAATGACAAATTATTGATATGTCCTTTTAATCCTGGGTAAGTATGAAAACCAAGTATATGTTAACACTTTGCACCTTTGTTTTTGTTATAACTCTATTGTATGATTGTTGTCTATATAGATGTCATTGGATGTTGTTGGTGATATCAATAAAAACATTCACAATTTATTCAATTGACTCCATG

mRNA sequence

ATGAAAGAATTTTGCTTGATGGAGGAATTAGCAAGCACTGTTATGACAATTTATATCGCATACCTATGCGAGTTTGACCCATCCATCTTAGAGCAATATGCATTTCTACATCCAGCATTGATCTTAGTTGGCTCGGGATCTGAAGAGAGCCGCTCTCAAGTCCTATGTAAAAGGTTAAGACAGGTCAATGACAAATTATTGATATGTCCTTTTAATCCTGGATGTCATTGGATGTTGTTGGTGATATCAATAAAAACATTCACAATTTATTCAATTGACTCCATG

Coding sequence (CDS)

ATGAAAGAATTTTGCTTGATGGAGGAATTAGCAAGCACTGTTATGACAATTTATATCGCATACCTATGCGAGTTTGACCCATCCATCTTAGAGCAATATGCATTTCTACATCCAGCATTGATCTTAGTTGGCTCGGGATCTGAAGAGAGCCGCTCTCAAGTCCTATGTAAAAGGTTAAGACAGGTCAATGACAAATTATTGATATGTCCTTTTAATCCTGGATGTCATTGGATGTTGTTGGTGATATCAATAAAAACATTCACAATTTATTCAATTGACTCCATG

Protein sequence

MKEFCLMEELASTVMTIYIAYLCEFDPSILEQYAFLHPALILVGSGSEESRSQVLCKRLRQVNDKLLICPFNPGCHWMLLVISIKTFTIYSIDSM

Homology

[Close]

BLAST of Spg024311 vs. NCBI nr
Match: KAA0054199.1 (uncharacterized protein E6C27_scaffold131G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 7.9e-13
Identity = 40/74 (54.05%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 1   MKEFCLMEELASTVMTIYIAYLCEFDPSILEQYAFLHPALILVGSGSEESRSQVLCKRLR 60
           +K+ CLMEELA +V+  Y+  L E DPSILE+YAF++P  I  G G++E+R++ LC RL 
Sbjct: 145 IKQLCLMEELALSVILSYMICLYESDPSILEEYAFMNPGQISKGLGTDENRARHLCNRLV 204

Query: 61  QVNDKLLICPFNPG 75
            + +KLLICPFN G
Sbjct: 205 SIKNKLLICPFNCG 218

[Close]

BLAST of Spg024311 vs. NCBI nr
Match: TYK26496.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-09
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 3   EFCLMEELASTVMTIYIAYLCEFDPSILEQYAFLHPALILVGSGSEESRSQVLCKRLRQV 62
           +FC M E+ +  +  YIAYL   D   L  Y F+ P+LI VG   +E R++ LC RL   
Sbjct: 856 DFCNMREVKTLTLVAYIAYLHSQDE--LSNYIFVDPSLIFVGHNIQEVRARNLCSRLMAS 915

Query: 63  N-DKLLICPFNPGCHWMLLVISIKTFTIYSIDSM 96
             ++L++ PFNPG HW LL I+    T+Y +DS+
Sbjct: 916 KPNQLVLAPFNPGGHWALLAINAYDETVYYLDSL 947

[Close]

BLAST of Spg024311 vs. NCBI nr
Match: KAA0047527.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-09
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 3   EFCLMEELASTVMTIYIAYLCEFDPSILEQYAFLHPALILVGSGSEESRSQVLCKRLRQV 62
           +FC M E+ +  +  YIAYL   D   L  Y F+ P+LI VG   +E R++ LC RL   
Sbjct: 856 DFCNMREVKTLTLVAYIAYLHSQDE--LSNYIFVDPSLIFVGHNIQEVRARNLCSRLMAS 915

Query: 63  N-DKLLICPFNPGCHWMLLVISIKTFTIYSIDSM 96
             ++L++ PFNPG HW LL I+    T+Y +DS+
Sbjct: 916 KPNQLVLAPFNPGGHWALLAINAYDETVYYLDSL 947

[Close]

BLAST of Spg024311 vs. NCBI nr
Match: ONH90473.1 (hypothetical protein PRUPE_8G055800 [Prunus persica])

HSP 1 Score: 71.6 bits (174), Expect = 4.0e-09
Identity = 33/96 (34.38%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 3   EFCLMEELASTVMTIYIAYLCEF--DPSILEQYAFLHPALILVGSGSEESRSQVLCKRLR 62
           +F  MEE+ +TV+ +Y+ YL +     ++     F+ PA +   SG+   RS+++  RL+
Sbjct: 49  QFAGMEEIGATVLAVYMRYLHDVLKQANMCSMVGFIDPATVSANSGTITERSRLVAARLQ 108

Query: 63  QVN-DKLLICPFNPGCHWMLLVISIKTFTIYSIDSM 96
           + + ++L + P+NPGCHW+LL++  K  TIY +D +
Sbjct: 109 KTDGEQLFMMPYNPGCHWILLIVRAKKETIYFLDPL 144

[Close]

BLAST of Spg024311 vs. NCBI nr
Match: TYK24859.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-08
Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 3    EFCLMEELASTVMTIYIAYLCE--FDPSILEQYAFLHPALILVGSGSEESRSQVLCKRL- 62
            +FC M+++ +  M  YI YL     D   + +Y F+ P+LI  G  + E R+Q LC RL 
Sbjct: 1086 DFCNMQKVKTLSMVAYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRAQNLCSRLM 1145

Query: 63   RQVNDKLLICPFNPGCHWMLLVISIKTFTIYSIDSM 96
                D+L++ P+NPG HW L++I+     +Y +DS+
Sbjct: 1146 TSKQDQLVVAPYNPGDHWSLVIINPYDDVVYHLDSL 1181

[Close]

BLAST of Spg024311 vs. ExPASy TrEMBL
Match: A0A5A7UL21 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001360 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.8e-13
Identity = 40/74 (54.05%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 1   MKEFCLMEELASTVMTIYIAYLCEFDPSILEQYAFLHPALILVGSGSEESRSQVLCKRLR 60
           +K+ CLMEELA +V+  Y+  L E DPSILE+YAF++P  I  G G++E+R++ LC RL 
Sbjct: 145 IKQLCLMEELALSVILSYMICLYESDPSILEEYAFMNPGQISKGLGTDENRARHLCNRLV 204

Query: 61  QVNDKLLICPFNPG 75
            + +KLLICPFN G
Sbjct: 205 SIKNKLLICPFNCG 218

[Close]

BLAST of Spg024311 vs. ExPASy TrEMBL
Match: A0A5D3DS40 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00680 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 5.1e-10
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 3   EFCLMEELASTVMTIYIAYLCEFDPSILEQYAFLHPALILVGSGSEESRSQVLCKRLRQV 62
           +FC M E+ +  +  YIAYL   D   L  Y F+ P+LI VG   +E R++ LC RL   
Sbjct: 856 DFCNMREVKTLTLVAYIAYLHSQDE--LSNYIFVDPSLIFVGHNIQEVRARNLCSRLMAS 915

Query: 63  N-DKLLICPFNPGCHWMLLVISIKTFTIYSIDSM 96
             ++L++ PFNPG HW LL I+    T+Y +DS+
Sbjct: 916 KPNQLVLAPFNPGGHWALLAINAYDETVYYLDSL 947

[Close]

BLAST of Spg024311 vs. ExPASy TrEMBL
Match: A0A5A7U006 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001620 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 5.1e-10
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 3   EFCLMEELASTVMTIYIAYLCEFDPSILEQYAFLHPALILVGSGSEESRSQVLCKRLRQV 62
           +FC M E+ +  +  YIAYL   D   L  Y F+ P+LI VG   +E R++ LC RL   
Sbjct: 856 DFCNMREVKTLTLVAYIAYLHSQDE--LSNYIFVDPSLIFVGHNIQEVRARNLCSRLMAS 915

Query: 63  N-DKLLICPFNPGCHWMLLVISIKTFTIYSIDSM 96
             ++L++ PFNPG HW LL I+    T+Y +DS+
Sbjct: 916 KPNQLVLAPFNPGGHWALLAINAYDETVYYLDSL 947

[Close]

BLAST of Spg024311 vs. ExPASy TrEMBL
Match: M5VIC6 (ULP_PROTEASE domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_8G055800 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.0e-09
Identity = 33/96 (34.38%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 3   EFCLMEELASTVMTIYIAYLCEF--DPSILEQYAFLHPALILVGSGSEESRSQVLCKRLR 62
           +F  MEE+ +TV+ +Y+ YL +     ++     F+ PA +   SG+   RS+++  RL+
Sbjct: 49  QFAGMEEIGATVLAVYMRYLHDVLKQANMCSMVGFIDPATVSANSGTITERSRLVAARLQ 108

Query: 63  QVN-DKLLICPFNPGCHWMLLVISIKTFTIYSIDSM 96
           + + ++L + P+NPGCHW+LL++  K  TIY +D +
Sbjct: 109 KTDGEQLFMMPYNPGCHWILLIVRAKKETIYFLDPL 144

[Close]

BLAST of Spg024311 vs. ExPASy TrEMBL
Match: M5WZJ5 (ULP_PROTEASE domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa018126mg PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.7e-09
Identity = 33/96 (34.38%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 3   EFCLMEELASTVMTIYIAYLCEF--DPSILEQYAFLHPALILVGSGSEESRSQVLCKRLR 62
           +F  MEE+ +TV+ +Y+ YL +     ++     F+ PA +   SG+   RS++L  RL+
Sbjct: 463 QFAGMEEIGATVIAVYLRYLHDVLKRANMCSMVGFIDPATVSASSGTIADRSRLLAARLQ 522

Query: 63  QVND-KLLICPFNPGCHWMLLVISIKTFTIYSIDSM 96
           + +D ++ + P+NPG HW+LL++  K  T+Y +DS+
Sbjct: 523 RTDDEQIFLMPYNPGRHWILLIVRAKRETVYFLDSL 558

The following BLAST results are available for this feature:

BLAST of Spg024311 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054199.1	7.9e-13	54.05	uncharacterized protein E6C27_scaffold131G001360 [Cucumis melo var. makuwa]	[more]
TYK26496.1	1.1e-09	41.49	transposase [Cucumis melo var. makuwa]	[more]
KAA0047527.1	1.1e-09	41.49	transposase [Cucumis melo var. makuwa]	[more]
ONH90473.1	4.0e-09	34.38	hypothetical protein PRUPE_8G055800 [Prunus persica]	[more]
TYK24859.1	1.5e-08	36.46	transposase [Cucumis melo var. makuwa]	[more]

BLAST of Spg024311 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg024311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UL21	3.8e-13	54.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DS40	5.1e-10	41.49	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00680 PE...	[more]
A0A5A7U006	5.1e-10	41.49	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001620 P...	[more]
M5VIC6	2.0e-09	34.38	ULP_PROTEASE domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_8G0558...	[more]
M5WZJ5	5.7e-09	34.38	ULP_PROTEASE domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=P...	[more]

BLAST of Spg024311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.395.10	Adenoviral Proteinase; Chain A	coord: 1..95 e-value: 9.8E-7 score: 30.3
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 8..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024311.1	Spg024311.1	mRNA