Spg024128 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024128
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Calmodulin-related, putative isoform 1
Location	scaffold4: 19314838 .. 19317271 (-)
RNA-Seq Expression	Spg024128
Synteny	Spg024128

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGAACAACGCTACTCTCCCCTACAAAAGCAACCCTCCACACCCAACATCCGTACCTCCCTCATTCCCATACTCCCGTCGTCCCCCCTTTCCTAACGATTTACAAGATTATTTCCCTTTTTTCCCCTTCTTAACATACCTATTCATAATGGGGGCATTACAGTTTCATGCCTACAGGGAAGTTGAGTCCTGCCTAAAATATATGAAAAGGGAAAATGTCTATTCTGCACGTATTTTATGTAGAAATGTGAATTTCATCTATTTCAACTCGTTCTCATTGGTGTAGTTTGAAAAGTTTTAAAATCTATTTCAGGGAAAGAACAAAGGCTCAAAAGCAAAGAGAAAAGCTTCTGTCGAGAAATCAAATAACTTCGACGATGAAGATGATGATGATGCCTTACGACAGGTAGATTCATAACATTCCATCAATAATTTGTAATACAAGACAGCACAAACAGGCTAACTATATCATGACTTCCCTAGCAGGCAATCGAACTTTCACTACGAGATTCTGGTGAAAATTCTGATGCTCAGGTGCGAGGTCTGTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAGTGAGAGGAGGGATGAAGAGAAAAGGATCGGTAGCTTTTTAACTCAACGTTATAGCCTTGGTGATCCTTTATATTTTTTTTCTCTTAATGCTTTGTCTTCACATCTGATCTGCAGTTAACTAGTCGGATGCAGATGAATGAAGATGAACTTATCATGAACTTCTATTGCTTTGATGGTAATTTATATATTGTTATAAATTAAAACACTTTAAACTAATTTTTGCTACTGAGCTGGTGAATTTGACTAATAGAGTCATGGAAAGGGAGCATTGTTGTTCGTGACTTGAGAAGAGTGGCAGCTGCTTATGATTTTATTTGGTCTGACCAAGAATTAATGGATATGATTGATTGTTTTGACAGTGATGGAGATGGGAAGGTTAGTTTCTTGGATTCATGCTCTTCTTTCATCTTCCTATTCCATTCTTTTGAATCGTAATATTAAAATGGTTTTGAGTCTTAAGATATATGTTTTCAATTTTGTCATTCAAGTTTCAAAGTTCTTAATAATACCATCAAACTTACCCGCTATTTTAAAAATGTTCTTAGTTCTCCCTTTACTTAACAACACCAACAGTGATAAGACATGATACATTATATTTAGTTCACTTGTTTAGAAAAAGACATCTTGACATCAGTGACAATGATGAAGAGAGTGTAACCTTTTACATTGTGTTTACAAACTTCTTCAAGACATTTTTTAAAACATTTGATGCATCTTCTCTGCTTATTTTTTTTTTTCAAAACAGACAATACTTATCAAATATCTTTTAGGTGGTGGTTCTGATATTATGGCAATTGCTTCTAGAAAAGATCAAAATGTTAATGGTAACCTACCAAAGAAGTAAGAATCATAAACTACCTAAATTTCAGCATCATCAGAAGGCTACAGAAAGTCTTTGAAGGTTTATATCTCTAACTACTGGAATATTTTTCGAAAGGAAATTTTTTTTGACCAGTTACCTATATGTATATAGCCTGTTGTTTCAGCCAGTAAATATAATTACTTTTATCTACCATCTTGACGAACATATCTTGCTTGAATCCAAGCTTTGATCATCCTTTCCAAGATATATCTGACCTTCATTTTCCTTTTCCATAACAGTTGAATCTGGATGATTTCCGGAGAATTGCTGGTCGATGTAACATGATAAAAGAGTCCATCACTTGATTGACTTGGACAATGACAGACAGACTGGTGCACCAATGGGCAAGTATGGAGGAGGATCTTGACAAGAATCGAAGAGGATTGTGGTACCAATTGCATCCCTCACTCTCTCTCTCTGCATTTTTGTAGAACAATCAAATTGAGATATGCTCTTTGTCCAACCAATCCGAAACATATTATGAGGTTTGTCGCTCGGAGCATCAAAACTTTCTTGTTGGAAGAAAAAGCTCTGAAGTTCATCATAAGATGACGACCATAGTGGAGCAACTAATCAACTCAAGTCAAGAACCGATCTTCATGTTTTTGTGGATTTCTGAAGTCTTGTAGCTGTAGTGCATTCAAACTTCTCGTCGTGAATGTGAGGTTCCGACCCCATGTGTTTCAAGCTTTGAGATCTGTCTTTGAAGTTTGAAACTGAGGGGAAAGATGTATTGGTATTGTCATGTGTGGGGTTGATTGTGATATTCCTGCTATACTAGTATGGTTAATTTGGTTGAAGGGCATTTGTTTATTATTCTGCTCAAAACATTGCGGTTACAAAAATTGTATGTTTTGGGGATGCTGAATCTGAAAATGCAAGATCATATATTTCAGTTCAATTGGATAGAGTATCGGCAACTTGCTTGATTATGTAGGTGGTCACCTCAAGTCTGAACCTATTCTAAATTAACCAGCCTATGAC

mRNA sequence

ATGCCGAACAACGCTACTCTCCCCTACAAAAGCAACCCTCCACACCCAACATCCGGAAAGAACAAAGGCTCAAAAGCAAAGAGAAAAGCTTCTGTCGAGAAATCAAATAACTTCGACGATGAAGATGATGATGATGCCTTACGACAGGCAATCGAACTTTCACTACGAGATTCTGGTGAAAATTCTGATGCTCAGGTGCGAGGTCTGTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAGTGAGAGGAGGGATGAAGAGAAAAGGATCGTTAACTAGTCGGATGCAGATGAATGAAGATGAACTTATCATGAACTTCTATTGCTTTGATGAGTCATGGAAAGGGAGCATTGTTGTTCGTGACTTGAGAAGAGTGGCAGCTGCTTATGATTTTATTTGGTCTGACCAAGAATTAATGGATATGATTGATTGTTTTGACAGTGATGGAGATGGGAAGTTGAATCTGGATGATTTCCGGAGAATTGCTGGTCGATGTAACATGATAAAAGAGTCCATCACTTGA

Coding sequence (CDS)

ATGCCGAACAACGCTACTCTCCCCTACAAAAGCAACCCTCCACACCCAACATCCGGAAAGAACAAAGGCTCAAAAGCAAAGAGAAAAGCTTCTGTCGAGAAATCAAATAACTTCGACGATGAAGATGATGATGATGCCTTACGACAGGCAATCGAACTTTCACTACGAGATTCTGGTGAAAATTCTGATGCTCAGGTGCGAGGTCTGTTTGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAGTGAGAGGAGGGATGAAGAGAAAAGGATCGTTAACTAGTCGGATGCAGATGAATGAAGATGAACTTATCATGAACTTCTATTGCTTTGATGAGTCATGGAAAGGGAGCATTGTTGTTCGTGACTTGAGAAGAGTGGCAGCTGCTTATGATTTTATTTGGTCTGACCAAGAATTAATGGATATGATTGATTGTTTTGACAGTGATGGAGATGGGAAGTTGAATCTGGATGATTTCCGGAGAATTGCTGGTCGATGTAACATGATAAAAGAGTCCATCACTTGA

Protein sequence

MPNNATLPYKSNPPHPTSGKNKGSKAKRKASVEKSNNFDDEDDDDALRQAIELSLRDSGENSDAQVRGLFENVRRKNVKNQEVRGGMKRKGSLTSRMQMNEDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQELMDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT

Homology

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BLAST of Spg024128 vs. NCBI nr
Match: XP_004140495.1 (uncharacterized protein LOC101206207 [Cucumis sativus] >KGN46547.1 hypothetical protein Csa_005249 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 2.1e-67
Identity = 132/159 (83.02%), Postives = 145/159 (91.19%), Query Frame = 0


Query: 17  TSGKNKGSKAKRKASVEKSNNFDDEDDDDALRQAIELSLRDSGENSDAQVRGLFENVRRK 76
           T GKN+GS+ KRK SV+KSNNF+ EDDDDAL+QAI+LSL+DSGENSDAQV+G FENVRRK
Sbjct: 128 TKGKNRGSETKRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGSFENVRRK 187

Query: 77  NVKNQEVRGGMKRKGSLTSRMQMNEDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWS 136
           N+KNQE RGGMKRKG  TSRMQMNEDELIMNFYCFDESWKG I VRDL+RVA A+DF WS
Sbjct: 188 NLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVADAHDFTWS 247

Query: 137 DQELMDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT 176
           + EL DMIDCFD+DGDGKLNLDDFRRIAGRCNMIKESIT
Sbjct: 248 EIELRDMIDCFDNDGDGKLNLDDFRRIAGRCNMIKESIT 286

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BLAST of Spg024128 vs. NCBI nr
Match: XP_038874842.1 (centrin-1-like [Benincasa hispida])

HSP 1 Score: 258.8 bits (660), Expect = 3.3e-65
Identity = 132/158 (83.54%), Postives = 143/158 (90.51%), Query Frame = 0


Query: 19  GKNKGSKAKRKASVEKSNNFDDEDDD-DALRQAIELSLRDSGENSDAQVRGLFENVRRKN 78
           GKN+GS+AKRK  V+KSNN DDEDDD DALRQAI+LSL+DSGEN DAQV+G  ENVRRKN
Sbjct: 110 GKNRGSEAKRKVPVKKSNNSDDEDDDEDALRQAIKLSLQDSGENCDAQVQGPLENVRRKN 169

Query: 79  VKNQEVRGGMKRKGSLTSRMQMNEDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSD 138
           VKNQEVRGGMKRKG  TSRMQMN+DELIMNFYCFD+SWKG I V DL+RVAAA+DF WSD
Sbjct: 170 VKNQEVRGGMKRKGLFTSRMQMNDDELIMNFYCFDDSWKGDITVSDLKRVAAAHDFTWSD 229

Query: 139 QELMDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT 176
            EL DMIDCFDSDGDGKLNL+DFRRIAGRCNMIKESIT
Sbjct: 230 IELRDMIDCFDSDGDGKLNLNDFRRIAGRCNMIKESIT 267

[Close]

BLAST of Spg024128 vs. NCBI nr
Match: XP_022159279.1 (uncharacterized protein LOC111025692 isoform X1 [Momordica charantia])

HSP 1 Score: 258.1 bits (658), Expect = 5.6e-65
Identity = 130/154 (84.42%), Postives = 140/154 (90.91%), Query Frame = 0


Query: 20  KNKGSKAKRKASVEKSNNFDDEDDDDALRQAIELSLRDSGENSDAQVRGLFENVRRKNVK 79
           KNKGSKAKRK SVEKSNN DDEDDD+ALRQAIELSLRDSG NSDAQV+G  ENV+RKNVK
Sbjct: 134 KNKGSKAKRKTSVEKSNNLDDEDDDNALRQAIELSLRDSGVNSDAQVQGAIENVKRKNVK 193

Query: 80  NQEVRGGMKRKGSLTSRMQMNEDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQE 139
            Q++ GGMKRKGS TSRMQMNEDELI+NFY FDE WKGSI V D++RVAAA+DF WSDQE
Sbjct: 194 TQKITGGMKRKGSFTSRMQMNEDELIVNFYYFDELWKGSISVSDMKRVAAAHDFTWSDQE 253

Query: 140 LMDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKES 174
           L DMIDCFDSDGDGKLNLDDFRRIAG+CNMIKES
Sbjct: 254 LKDMIDCFDSDGDGKLNLDDFRRIAGQCNMIKES 287

[Close]

BLAST of Spg024128 vs. NCBI nr
Match: XP_022959491.1 (caltractin-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 249.6 bits (636), Expect = 2.0e-62
Identity = 127/157 (80.89%), Postives = 142/157 (90.45%), Query Frame = 0


Query: 19  GKNKGSKAKRKASVEKSNNFDDEDDDDALRQAIELSLRDSGENSDAQVRGLFENVRRKNV 78
           GKN+GSKAKRK+SVEKSNN +DE DDDAL+QAI+LSL+DSGE SDAQ++G FENVRRKNV
Sbjct: 128 GKNRGSKAKRKSSVEKSNNLNDE-DDDALQQAIKLSLQDSGETSDAQMQGPFENVRRKNV 187

Query: 79  KNQEVRGGMKRKGSLTSRMQMNEDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQ 138
           KNQE+ GGMKRKG  TSRMQMNEDELIMNFYCFDESWKGSI V DL+RVAA +DF WS +
Sbjct: 188 KNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHDFTWSVK 247

Query: 139 ELMDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT 176
           EL DMI+CFDSDGD KL++DDFRRIA RCNMIKESIT
Sbjct: 248 ELEDMINCFDSDGDAKLSMDDFRRIASRCNMIKESIT 283

[Close]

BLAST of Spg024128 vs. NCBI nr
Match: XP_023006622.1 (caltractin-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 248.4 bits (633), Expect = 4.4e-62
Identity = 126/157 (80.25%), Postives = 142/157 (90.45%), Query Frame = 0


Query: 19  GKNKGSKAKRKASVEKSNNFDDEDDDDALRQAIELSLRDSGENSDAQVRGLFENVRRKNV 78
           GKN+GSK KRK+SVEKSNN +DE DDDAL+QAI+LSL++SGE SDAQ++G FENVRRKNV
Sbjct: 128 GKNRGSKEKRKSSVEKSNNLNDE-DDDALQQAIKLSLQESGETSDAQMQGPFENVRRKNV 187

Query: 79  KNQEVRGGMKRKGSLTSRMQMNEDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQ 138
           KNQE+ GGMKRKG  TSRMQMNEDELIMNFYCFDESWKGSI VRDL+RVAA +DF WS +
Sbjct: 188 KNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVRDLKRVAAVHDFTWSVK 247

Query: 139 ELMDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT 176
           EL DMI+CFDSDGD KL++DDFRRIA RCNMIKESIT
Sbjct: 248 ELEDMINCFDSDGDAKLSMDDFRRIASRCNMIKESIT 283

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BLAST of Spg024128 vs. ExPASy Swiss-Prot
Match: Q32LE3 (Centrin-1 OS=Bos taurus OX=9913 GN=CETN1 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.2e-07
Identity = 27/69 (39.13%), Postives = 43/69 (62.32%), Query Frame = 0


Query: 101 EDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQELMDMIDCFDSDGDGKLNLDDF 160
           ++E++  F  FD+   G I  ++L+RVA       +D+EL +MID  D DGDG++N D+F
Sbjct: 103 KEEILKAFRLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEDEF 162

Query: 161 RRIAGRCNM 170
            RI  + N+
Sbjct: 163 LRIMKKTNL 171

[Close]

BLAST of Spg024128 vs. ExPASy Swiss-Prot
Match: O35648 (Centrin-3 OS=Mus musculus OX=10090 GN=Cetn3 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.6e-06
Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 102 DELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQELMDMIDCFDSDGDGKLNLDDF 161
           +E++  F  FD+   G I +R+LRRVA       SD+EL  MI+ FD DGDG++N ++F
Sbjct: 101 EEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEF 159

[Close]

BLAST of Spg024128 vs. ExPASy Swiss-Prot
Match: P27482 (Calmodulin-like protein 3 OS=Homo sapiens OX=9606 GN=CALML3 PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 3.0e-05
Identity = 39/130 (30.00%), Postives = 64/130 (49.23%), Query Frame = 0


Query: 38  FDDEDDDDALRQAIELSLRDSGEN-SDAQVRGLFENVRRK---NVKNQEVRGGMKRKGSL 97
           FD + D     + +   +R  G+N ++A++R +   + R     V   E  G M RK   
Sbjct: 20  FDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKD 79

Query: 98  TSRMQMNEDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQELMDMIDCFDSDGDG 157
           T     NE+E+   F  FD+   G +   +LR V        SD+E+ +MI   D+DGDG
Sbjct: 80  TD----NEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDG 139

Query: 158 KLNLDDFRRI 164
           ++N ++F R+
Sbjct: 140 QVNYEEFVRV 145

[Close]

BLAST of Spg024128 vs. ExPASy Swiss-Prot
Match: Q06827 (Caltractin OS=Scherffelia dubia OX=3190 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-04
Identity = 43/166 (25.90%), Postives = 84/166 (50.60%), Query Frame = 0


Query: 22  KGSKAKRKASVEKSNNFDDEDDDDALRQAIELSLRDSGENSDAQ-----VRGLFENVRRK 81
           K + A+R  +  +S    +E   + +R+A +L   D     DA+     +R L    +++
Sbjct: 5   KAASARRDKAKTRSAGLTEEQKQE-IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKE 64

Query: 82  NVKNQEVRGGMKRKGS-----------LTSRM--QMNEDELIMNFYCFDESWKGSIVVRD 141
            +K  ++   + + GS           +T++M  + + +E++  F  FD+   G I  ++
Sbjct: 65  EIK--KMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKN 124

Query: 142 LRRVAAAYDFIWSDQELMDMIDCFDSDGDGKLNLDDFRRIAGRCNM 170
           L+RVA       +D+EL +MID  D DGDG++N ++F RI  + ++
Sbjct: 125 LKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIMKKTSL 167

[Close]

BLAST of Spg024128 vs. ExPASy Swiss-Prot
Match: O15182 (Centrin-3 OS=Homo sapiens OX=9606 GN=CETN3 PE=1 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-04
Identity = 47/153 (30.72%), Postives = 69/153 (45.10%), Query Frame = 0


Query: 25  KAKRKASVEKSNNFDDEDDDDALRQAIELSLRDSGENSD-----AQVRGLFENVRRKNVK 84
           K KRK   E S     E+    ++ A EL   D  E  D       +R L  +V++ +V 
Sbjct: 13  KTKRKKRRELS-----EEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVL 72

Query: 85  NQEVRGGMKRKGSLTSRMQMNE------------DELIMNFYCFDESWKGSIVVRDLRRV 144
                   +  G +T     NE            +E++  F  FD+   G I +R+LRRV
Sbjct: 73  KILKDYDREATGKITFE-DFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRV 132

Query: 145 AAAYDFIWSDQELMDMIDCFDSDGDGKLNLDDF 161
           A       SD+EL  MI+ FD DGDG++N ++F
Sbjct: 133 ARELGENMSDEELRAMIEEFDKDGDGEINQEEF 159

[Close]

BLAST of Spg024128 vs. ExPASy TrEMBL
Match: A0A0A0KDV1 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108450 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.0e-67
Identity = 132/159 (83.02%), Postives = 145/159 (91.19%), Query Frame = 0


Query: 17  TSGKNKGSKAKRKASVEKSNNFDDEDDDDALRQAIELSLRDSGENSDAQVRGLFENVRRK 76
           T GKN+GS+ KRK SV+KSNNF+ EDDDDAL+QAI+LSL+DSGENSDAQV+G FENVRRK
Sbjct: 128 TKGKNRGSETKRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGSFENVRRK 187

Query: 77  NVKNQEVRGGMKRKGSLTSRMQMNEDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWS 136
           N+KNQE RGGMKRKG  TSRMQMNEDELIMNFYCFDESWKG I VRDL+RVA A+DF WS
Sbjct: 188 NLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVADAHDFTWS 247

Query: 137 DQELMDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT 176
           + EL DMIDCFD+DGDGKLNLDDFRRIAGRCNMIKESIT
Sbjct: 248 EIELRDMIDCFDNDGDGKLNLDDFRRIAGRCNMIKESIT 286

[Close]

BLAST of Spg024128 vs. ExPASy TrEMBL
Match: A0A6J1E1Z5 (uncharacterized protein LOC111025692 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025692 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.7e-65
Identity = 130/154 (84.42%), Postives = 140/154 (90.91%), Query Frame = 0


Query: 20  KNKGSKAKRKASVEKSNNFDDEDDDDALRQAIELSLRDSGENSDAQVRGLFENVRRKNVK 79
           KNKGSKAKRK SVEKSNN DDEDDD+ALRQAIELSLRDSG NSDAQV+G  ENV+RKNVK
Sbjct: 134 KNKGSKAKRKTSVEKSNNLDDEDDDNALRQAIELSLRDSGVNSDAQVQGAIENVKRKNVK 193

Query: 80  NQEVRGGMKRKGSLTSRMQMNEDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQE 139
            Q++ GGMKRKGS TSRMQMNEDELI+NFY FDE WKGSI V D++RVAAA+DF WSDQE
Sbjct: 194 TQKITGGMKRKGSFTSRMQMNEDELIVNFYYFDELWKGSISVSDMKRVAAAHDFTWSDQE 253

Query: 140 LMDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKES 174
           L DMIDCFDSDGDGKLNLDDFRRIAG+CNMIKES
Sbjct: 254 LKDMIDCFDSDGDGKLNLDDFRRIAGQCNMIKES 287

[Close]

BLAST of Spg024128 vs. ExPASy TrEMBL
Match: A0A6J1H502 (caltractin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460448 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 9.6e-63
Identity = 127/157 (80.89%), Postives = 142/157 (90.45%), Query Frame = 0


Query: 19  GKNKGSKAKRKASVEKSNNFDDEDDDDALRQAIELSLRDSGENSDAQVRGLFENVRRKNV 78
           GKN+GSKAKRK+SVEKSNN +DE DDDAL+QAI+LSL+DSGE SDAQ++G FENVRRKNV
Sbjct: 128 GKNRGSKAKRKSSVEKSNNLNDE-DDDALQQAIKLSLQDSGETSDAQMQGPFENVRRKNV 187

Query: 79  KNQEVRGGMKRKGSLTSRMQMNEDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQ 138
           KNQE+ GGMKRKG  TSRMQMNEDELIMNFYCFDESWKGSI V DL+RVAA +DF WS +
Sbjct: 188 KNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVSDLKRVAAVHDFTWSVK 247

Query: 139 ELMDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT 176
           EL DMI+CFDSDGD KL++DDFRRIA RCNMIKESIT
Sbjct: 248 ELEDMINCFDSDGDAKLSMDDFRRIASRCNMIKESIT 283

[Close]

BLAST of Spg024128 vs. ExPASy TrEMBL
Match: A0A6J1KWC6 (caltractin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499295 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.1e-62
Identity = 126/157 (80.25%), Postives = 142/157 (90.45%), Query Frame = 0


Query: 19  GKNKGSKAKRKASVEKSNNFDDEDDDDALRQAIELSLRDSGENSDAQVRGLFENVRRKNV 78
           GKN+GSK KRK+SVEKSNN +DE DDDAL+QAI+LSL++SGE SDAQ++G FENVRRKNV
Sbjct: 128 GKNRGSKEKRKSSVEKSNNLNDE-DDDALQQAIKLSLQESGETSDAQMQGPFENVRRKNV 187

Query: 79  KNQEVRGGMKRKGSLTSRMQMNEDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQ 138
           KNQE+ GGMKRKG  TSRMQMNEDELIMNFYCFDESWKGSI VRDL+RVAA +DF WS +
Sbjct: 188 KNQEMGGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGSITVRDLKRVAAVHDFTWSVK 247

Query: 139 ELMDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKESIT 176
           EL DMI+CFDSDGD KL++DDFRRIA RCNMIKESIT
Sbjct: 248 ELEDMINCFDSDGDAKLSMDDFRRIASRCNMIKESIT 283

[Close]

BLAST of Spg024128 vs. ExPASy TrEMBL
Match: A0A6J1DY88 (uncharacterized protein LOC111025692 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025692 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.8e-54
Identity = 116/146 (79.45%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 20  KNKGSKAKRKASVEKSNNFDDEDDDDALRQAIELSLRDSGENSDAQVRGLFENVRRKNVK 79
           KNKGSKAKRK SVEKSNN DDEDDD+ALRQAIELSLRDSG NSDAQV+G  ENV+RKNVK
Sbjct: 134 KNKGSKAKRKTSVEKSNNLDDEDDDNALRQAIELSLRDSGVNSDAQVQGAIENVKRKNVK 193

Query: 80  NQEVRGGMKRKGSLTSRMQMNEDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQE 139
            Q++ GGMKRKGS TSRMQMNEDELI+NFY FDE WKGSI V D++RVAAA+DF WSDQE
Sbjct: 194 TQKITGGMKRKGSFTSRMQMNEDELIVNFYYFDELWKGSISVSDMKRVAAAHDFTWSDQE 253

Query: 140 LMDMIDCFDSDGD--GKLNLDDFRRI 164
           L DMIDCFDSDGD  GKL+L  FR +
Sbjct: 254 LKDMIDCFDSDGDGKGKLSLCCFRTL 279

[Close]

BLAST of Spg024128 vs. TAIR 10
Match: AT1G73440.1 (calmodulin-related )

HSP 1 Score: 111.7 bits (278), Expect = 6.0e-25
Identity = 68/156 (43.59%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 20  KNKGSKAKRKASVEKSNNFDDE--DDDDALRQAIELSLRDSGENSDAQVRGLFENVRRKN 79
           KNK S +KRK S  K  N      +DDD L +AI LSL+ S   SD              
Sbjct: 116 KNKSSASKRKVSSRKILNTSVSLGEDDDDLDKAIALSLQGSVAGSD-------------- 175

Query: 80  VKNQEVRGGMKRKGSLTSRMQMNEDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSD 139
              +E     K++  L S+ QM +DEL+M F  FDE  KG I +RD+ ++A  +DF W++
Sbjct: 176 ---KEAATMKKKRPELMSKTQMTQDELVMYFCQFDEGGKGFITLRDVAKMATVHDFTWTE 235

Query: 140 QELMDMIDCFDSDGDGKLNLDDFRRIAGRCNMIKES 174
           +EL DMI CFD D DGKL+LD+FR+I  RC M+K S
Sbjct: 236 EELQDMIRCFDMDKDGKLSLDEFRKIVSRCRMLKGS 254

[Close]

BLAST of Spg024128 vs. TAIR 10
Match: AT4G00140.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 48.9 bits (115), Expect = 4.8e-06
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 113 ESWKGSIVVRDLRRVAAAYDFIWSDQELMDMIDCFDSDGDGKL 156
           E  KG I  RD+ ++A  +DF W+++EL DMI  FD D DGK+
Sbjct: 91  EGGKGFITRRDVAKMATVHDFTWTEEELQDMIRSFDMDKDGKV 133

[Close]

BLAST of Spg024128 vs. TAIR 10
Match: AT3G50360.1 (centrin2 )

HSP 1 Score: 42.4 bits (98), Expect = 4.5e-04
Identity = 21/66 (31.82%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 101 EDELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQELMDMIDCFDSDGDGKLNLDDF 160
           ++EL   F   D    G I   D++R+A      ++D E+ +M++  D D DG++N+D+F
Sbjct: 98  KEELTKAFQIIDLDKNGKISPDDIKRMAKDLGENFTDAEIREMVEEADRDRDGEVNMDEF 157

Query: 161 RRIAGR 167
            R+  R
Sbjct: 158 MRMMRR 163

[Close]

BLAST of Spg024128 vs. TAIR 10
Match: AT4G37010.1 (centrin 2 )

HSP 1 Score: 42.4 bits (98), Expect = 4.5e-04
Identity = 21/65 (32.31%), Postives = 36/65 (55.38%), Query Frame = 0


Query: 102 DELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQELMDMIDCFDSDGDGKLNLDDFR 161
           DEL   F   D    G I  RD++ +A      ++D ++ +MI+  D D DG++NL++F 
Sbjct: 99  DELSKAFKIIDHDNNGKISPRDIKMIAKELGENFTDNDIEEMIEEADRDKDGEVNLEEFM 158

Query: 162 RIAGR 167
           ++  R
Sbjct: 159 KMMKR 163

[Close]

BLAST of Spg024128 vs. TAIR 10
Match: AT4G37010.2 (centrin 2 )

HSP 1 Score: 42.4 bits (98), Expect = 4.5e-04
Identity = 21/65 (32.31%), Postives = 36/65 (55.38%), Query Frame = 0


Query: 102 DELIMNFYCFDESWKGSIVVRDLRRVAAAYDFIWSDQELMDMIDCFDSDGDGKLNLDDFR 161
           DEL   F   D    G I  RD++ +A      ++D ++ +MI+  D D DG++NL++F 
Sbjct: 103 DELSKAFKIIDHDNNGKISPRDIKMIAKELGENFTDNDIEEMIEEADRDKDGEVNLEEFM 162

Query: 162 RIAGR 167
           ++  R
Sbjct: 163 KMMKR 167

The following BLAST results are available for this feature:

BLAST of Spg024128 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140495.1	2.1e-67	83.02	uncharacterized protein LOC101206207 [Cucumis sativus] >KGN46547.1 hypothetical ...	[more]
XP_038874842.1	3.3e-65	83.54	centrin-1-like [Benincasa hispida]	[more]
XP_022159279.1	5.6e-65	84.42	uncharacterized protein LOC111025692 isoform X1 [Momordica charantia]	[more]
XP_022959491.1	2.0e-62	80.89	caltractin-like isoform X2 [Cucurbita moschata]	[more]
XP_023006622.1	4.4e-62	80.25	caltractin-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Spg024128 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32LE3	7.2e-07	39.13	Centrin-1 OS=Bos taurus OX=9913 GN=CETN1 PE=2 SV=1	[more]
O35648	3.6e-06	44.07	Centrin-3 OS=Mus musculus OX=10090 GN=Cetn3 PE=1 SV=1	[more]
P27482	3.0e-05	30.00	Calmodulin-like protein 3 OS=Homo sapiens OX=9606 GN=CALML3 PE=1 SV=2	[more]
Q06827	3.4e-04	25.90	Caltractin OS=Scherffelia dubia OX=3190 PE=1 SV=1	[more]
O15182	3.4e-04	30.72	Centrin-3 OS=Homo sapiens OX=9606 GN=CETN3 PE=1 SV=2	[more]

BLAST of Spg024128 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDV1	1.0e-67	83.02	EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108450 PE=...	[more]
A0A6J1E1Z5	2.7e-65	84.42	uncharacterized protein LOC111025692 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1H502	9.6e-63	80.89	caltractin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460448 PE=4 SV...	[more]
A0A6J1KWC6	2.1e-62	80.25	caltractin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499295 PE=4 SV=1	[more]
A0A6J1DY88	2.8e-54	79.45	uncharacterized protein LOC111025692 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Spg024128 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73440.1	6.0e-25	43.59	calmodulin-related	[more]
AT4G00140.1	4.8e-06	48.84	Calcium-binding EF-hand family protein	[more]
AT3G50360.1	4.5e-04	31.82	centrin2	[more]
AT4G37010.1	4.5e-04	32.31	centrin 2	[more]
AT4G37010.2	4.5e-04	32.31	centrin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 139..167 e-value: 5.8E-4 score: 29.2
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 135..161 e-value: 1.0E-5 score: 25.2
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 135..170 score: 11.640179
None	No IPR available	GENE3D	6.10.140.100		coord: 8..68 e-value: 3.5E-5 score: 25.7
None	No IPR available	GENE3D	1.10.238.10		coord: 86..174 e-value: 4.3E-11 score: 44.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 148..160
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 42..61 score: 9.2238
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 93..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024128.1	Spg024128.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding