Spg024076 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAGTAACTATGGCTCTTACACAAACCAGAACTCGTCTCAGAGACCACTGGCCATTGTTTTGGCTCTTGCTTCTGCAGTGGTGCTTTCGCCATTAAGATCCTTTGAAACCAGATTGAGCTCTGGATTTGCTCTTCCTCTGGTTCTTTTGGGGCTTATAATTGCCATCAAGACATCTTCCTCTTGCTCATCTATGTCCACTGAGAGAGGGGAGAGAGATTCTGCAACTCTCTCTTCAGATCCTTCGTGGGTTCTTAAAATTGGGAGCTCCTCTTGGGGACTTGCTGGGATTTTAGTGGTGTTGATTCTTGTGCTTTCTTGGCAAAATTCTGTTCAAGAATTCCTCTGGAGATAG ATGGATAGTAACTATGGCTCTTACACAAACCAGAACTCGTCTCAGAGACCACTGGCCATTGTTTTGGCTCTTGCTTCTGCAGTGGTGCTTTCGCCATTAAGATCCTTTGAAACCAGATTGAGCTCTGGATTTGCTCTTCCTCTGGTTCTTTTGGGGCTTATAATTGCCATCAAGACATCTTCCTCTTGCTCATCTATGTCCACTGAGAGAGGGGAGAGAGATTCTGCAACTCTCTCTTCAGATCCTTCGTGGGTTCTTAAAATTGGGAGCTCCTCTTGGGGACTTGCTGGGATTTTAGTGGTGTTGATTCTTGTGCTTTCTTGGCAAAATTCTGTTCAAGAATTCCTCTGGAGATAG ATGGATAGTAACTATGGCTCTTACACAAACCAGAACTCGTCTCAGAGACCACTGGCCATTGTTTTGGCTCTTGCTTCTGCAGTGGTGCTTTCGCCATTAAGATCCTTTGAAACCAGATTGAGCTCTGGATTTGCTCTTCCTCTGGTTCTTTTGGGGCTTATAATTGCCATCAAGACATCTTCCTCTTGCTCATCTATGTCCACTGAGAGAGGGGAGAGAGATTCTGCAACTCTCTCTTCAGATCCTTCGTGGGTTCTTAAAATTGGGAGCTCCTCTTGGGGACTTGCTGGGATTTTAGTGGTGTTGATTCTTGTGCTTTCTTGGCAAAATTCTGTTCAAGAATTCCTCTGGAGATAG MDSNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRLSSGFALPLVLLGLIIAIKTSSSCSSMSTERGERDSATLSSDPSWVLKIGSSSWGLAGILVVLILVLSWQNSVQEFLWR Homology
BLAST of Spg024076 vs. NCBI nr
Match: KAG6581812.1 (hypothetical protein SDJN03_21814, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43 Identity = 100/118 (84.75%), Postives = 109/118 (92.37%), Query Frame = 0
BLAST of Spg024076 vs. NCBI nr
Match: KAE8637311.1 (hypothetical protein CSA_023553, partial [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 1.0e-38 Identity = 96/119 (80.67%), Postives = 103/119 (86.55%), Query Frame = 0
BLAST of Spg024076 vs. NCBI nr
Match: KAA0058525.1 (putative transmembrane protein [Cucumis melo var. makuwa] >TYK07220.1 putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 165.2 bits (417), Expect = 3.3e-37 Identity = 95/119 (79.83%), Postives = 101/119 (84.87%), Query Frame = 0
BLAST of Spg024076 vs. NCBI nr
Match: KAF3958642.1 (hypothetical protein CMV_016470 [Castanea mollissima]) HSP 1 Score: 145.6 bits (366), Expect = 2.7e-31 Identity = 82/120 (68.33%), Postives = 94/120 (78.33%), Query Frame = 0
BLAST of Spg024076 vs. NCBI nr
Match: XP_030969466.1 (uncharacterized protein LOC115989757 [Quercus lobata]) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30 Identity = 82/120 (68.33%), Postives = 95/120 (79.17%), Query Frame = 0
BLAST of Spg024076 vs. ExPASy TrEMBL
Match: A0A0A0LEN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651850 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 5.0e-39 Identity = 96/119 (80.67%), Postives = 103/119 (86.55%), Query Frame = 0
BLAST of Spg024076 vs. ExPASy TrEMBL
Match: A0A5A7UY99 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001090 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37 Identity = 95/119 (79.83%), Postives = 101/119 (84.87%), Query Frame = 0
BLAST of Spg024076 vs. ExPASy TrEMBL
Match: A0A2N9IBH6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49527 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 5.0e-31 Identity = 79/120 (65.83%), Postives = 95/120 (79.17%), Query Frame = 0
BLAST of Spg024076 vs. ExPASy TrEMBL
Match: A0A7N2LMQ6 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 6.6e-31 Identity = 82/120 (68.33%), Postives = 95/120 (79.17%), Query Frame = 0
BLAST of Spg024076 vs. ExPASy TrEMBL
Match: A0A6N2MX54 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS420295 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 3.6e-29 Identity = 80/113 (70.80%), Postives = 92/113 (81.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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