Spg023799 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg023799
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Locationscaffold13: 7071848 .. 7075550 (+)
RNA-Seq ExpressionSpg023799
SyntenySpg023799
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATTAATCCAAAACTTTGCTTACAAAGGTTGTGTGCAACACAATACCAGATGAAACAGAAGGAAGAATTTACAGTGAATACATGACAAATAAGTAAAACTTCACATTAATTTTCATGAAGGAAGAATTTACGGTGAGAGAAGGAAAAAAAAAAGAAGCATTTTTCAATAAGGGTATTTTTGAAAATTTGTTGAAAGATCAAGGGTATTAATGAAACTAAAACTTTAACGGTTTCCATCCAAAAATTAACGACAAATTGTATTTTTGAATTTTTTTAAAGTTCAGGAGTATTTTTTAAACTTTTTAAAGTTAAGGGGCATTTTTTAAACAAACCTCATAGTTCAAGGGTATTTTTTATAATTTGGCCTAAATTAATTAATAATTTTTTTAATTAATTAATTAATTAAAAAAAATTGAACTCATCGTTGATTAAATTTACATTTTCAGATCACTAACTAAATGCATTCTAAGCTTCCATAAAGGGATCTTCTTTTGCTTTCAATTTTTTTAGTTCAACAGTGAGGTGAAGATTTAAACCTTTGAACTTGCCGAGGTTTTGATGTCTTAACAATTGTGGTTGTCCTTCACACCCTCTATTTAACTTGTGTAAAAAAGGTCAAATATCAACCCCAAAGAACAGTTATGCCTTTATAGAGTGTTCTCTATCCGAACCTAATTTATTTTAAACGTGAACCATGTGAAGATTTGATATGCTTCGTCTAGAACTCAATAATACGAAAAGAAAATGCTAACAAGAACATAACTTAGCTGACATAAAGCTTGTACTATTCACAAAAAGGTCAAAGGATCAAATCCCCACCCACATATTATCAAAAAAAAAAAAAAAAAAAAGAATATTTTCCATAACATTTTTATTTTATCTTTAATTTAAGTATTTCAAGCTATGCAACCAAAATATTCATTTACTTATGAAACATAAATATTTAAAATCCTTGAATAAATTAATACAAAGTGTTATGGGCAAAAATTAGCCAATAATATTTCATGCAGGGAAGCCCAAACTCATCGGACCCGAAGACAAAAGAAGCTGAATCAGCAAGACAAAAGGGTCGGAACTCTTTCCGACCCAAAACCAAGACCCTCGGCCTCGACCCAAGGGAGAGGCCGAGGATGTGGTCGGCCTTGGCAGGGCCAAAGGCCCGAGAAACCCCTCTGGGAAAAGACACCGACTGAAACCCTACCAAAAATCTATAAAAAGGGAGACGATGCACACACACAGGTATGAAAACTCGACCCCTAAATACATTCTACATGTTTTTCGGCAAAAGCTAACTTAAGCATCGGAGCGTGTGTGGTCTACACCACACTGGTGTGCAACATTTGTTCGTCTCGCAGGTCACCTCTTTCCCACTCTCCTACAAATTCAATGTTGATCGTCACGTGAAGCGAAGGGCAAATTCTTAAGCGAAATTTGACCATCAACAGTTGGCACCGTCTGTGGGGAAGATGCTGACTAGCAAGCGTTGTGCTCGATAGATAAGTGCAGCAGCAATGGAGCACCAAAATCAACCAGTGACAGACGAGGCGAGCCCCTTGGATCGACTCCAAGCCCAAGAGACTGAGATCGTAGCGATTAAAGGGAGGGTGAACGAGATGGGGCAGAATTTGACTGAAATCCTTAATTTGTTGAAGAAGCCCGAGTCTATGAGGCACGAGGAAGAGCATCTGCATAGAGATCCCAAGAAGGGTAAAGGGATAGCAGACGAGGAAGTAGGGGATTCGGAGGGTGTAACTAGCCGGATGCACCATCCAAGAGATGATCAGACTCGGAAGGAAGCTGGGCCCAGCCACAAAAAGGTCCGCAGGAATTCGCCGTTGAAACGAGCACCAGGTATGCATACAGAGAGTAATGACAGTAAAAGGTTGGAGGCTCGAGCAGGATCCAGGGCCGAACAGGGCTAACAGGGGTGAGAGCGGGAGCTATCCAAGTGGCTGAAAGAGGAAGACAGCCATCGCGACTCCCAAAGGAGAACTGAGAATGAAGACATAGAAGGGCTAATTGGGCAGATGAAGCCACCCTTCACTGACGAAATAATGGGAGGGGAGGTACTGCATAAATTTAAGGTACCAAACTTCCCATAGTACGATGGAAAGAAAGATCTGAAGCAGCACTTAGACGCAAACCTTACCTGGATGGATTTTCATGGGGCGAATGAAGCAACAAGGTGCCGAGCCTTCGCGTTAACACCGACAAGTTTGGCAAGACAGTGGTTTAGCAAAATACCGCGGAGATCAATCGGTTCATTCAAAGAATTAGCACGGGCGTTCGTTACGCAATTCTTAGGAGCTCGGAGCCGACAGAAACCCCGGATCAACCTACTGACAGTGAAACAAGGGCCGCGGGAGAGTCTGAAGGATTACATCAACAGGTTTAGTAACGAGGTATTACAGGTAGAAGGCTATGACGATGGAGTTGCCTTAACCGCTGTAATTTCAGGTTTGCAGGATGAGAGGTTGCTCAACTCGATCGGTGAGAGCCAGCCACGAACATATGTGGAATTCATGACTCGAGCACAAAGGTACATAAGTGTCGAGGAACTGCTGAAATCCAAACAGGAAGAGAGAGAGCCGGGGAGTCTCTATATCTGACCAGCATCGAGAAGACAGAGGGAAAGGGCGCTGGGTAGAAGATAGAAGCCGGAGCTGACATGAGCACTCCTCGGCCAATGGCCGAGGCGAAGCAAAGGCTAAGGAGCCGCGGGGTCGCGCAGAACCAAAAGCCAAGTTTGACAGGTATACACCGCTAACCGTTCCACTTGAACCGGTTCTGGCTGCAATACAAGATGCACATCTATTGAAACGTCCAGAAAAGTTAAAATCAGACCCAGACAGGAGAAACATGAACAAATACTGCATGTTCCACGGAGACCATGACCACACAACCCGGGAGTGTATACAGTTAAGGGATGAAATAGAAATCTTGATCCGAGAAGGCTACCTCAAGGAATTCGTGGGGAATGACAAGGGTAAAAGACCATTACCAACAGATCAAGGTAAGAGAGGCAACAACCCACTGCTCGAGATACGAACAATTTAAGAGGACCATCCGGTGGAGAATCAGGAGAGCAAGGTATGTAATCGCTCCTACTCGATGAAAACCCACTAAAATTGGAGTTTATAGAAAAAGAGGCCGCGGGGGTACACCATCCACACAATGACGCGCTGGTGGTCACCCTAACGATTGCCAATGCAAAAGTTCACCAGATCCTCGTTGACAGAGGGAGTTCTGCTGATGTTCTCTCAACCACTGCGTTTGATGCAATGAAGCTAGGAAGGGATCGCCTGAAGCCGAGCCTCACACCATTGGTGGGATTCGGTGGAGAAAAGGTGAACCCGCAAGGGTGCATCGAGCTGCCAGTAACCTTTGGAGAAGGACAACAATCAATCACAAGGTTAGTCAATTTCTTGGTGGTGGACTGCGTGCCAGCGTACAATGCTATCTTGGGATGACCAACCTTACATGGGCTAAAAGCAGTGGCTTCCACTTATCACCAAGTCCTGAAATTTCCAACTGAAGAAGGCGTGGGGGCGGTGTATGGTGAGCAGAAGATGTCAAGGGAATGCTACTTTATGGCGCTCAGAAACATCGACAGGAAGGTCCAAGCAACATCAGCCTCGGGAGATGGCCGAGGCCGATCATTTGTGGGATCAAGTTATCCCCTTCCAATGGAACATTGA

mRNA sequence

ATGAAAATTAATCCAAAACTTTGCTTACAAAGGGAAGCCCAAACTCATCGGACCCGAAGACAAAAGAAGCTGAATCAGCAAGACAAAAGGGTCGGAACTCTTTCCGACCCAAAACCAAGACCCTCGGCCTCGACCCAAGGGAGAGGCCGAGGATGTGGTCGGCCTTGGCAGGGCCAAAGGCCCGAGAAACCCCTCTGGGAAAAGACACCGACTGAAACCCTACCAAAAATCTATAAAAAGGGAGACGATGCACACACACAGATAAGTGCAGCAGCAATGGAGCACCAAAATCAACCAGTGACAGACGAGGCGAGCCCCTTGGATCGACTCCAAGCCCAAGAGACTGAGATCGTAGCGATTAAAGGGAGGGTGAACGAGATGGGGCAGAATTTGACTGAAATCCTTAATTTGTTGAAGAAGCCCGAGTCTATGAGGCACGAGGAAGAGCATCTGCATAGAGATCCCAAGAAGGGTAAAGGGATAGCAGACGAGGAAGTAGGGGATTCGGAGGGTGTAACTAGCCGGATGCACCATCCAAGAGATGATCAGACTCGGAAGGAAGCTGGGCCCAGCCACAAAAAGGTCCGCAGGAATTCGCCGTTGAAACGAGCACCAGGTTTGCAGGATGAGAGGTTGCTCAACTCGATCGGTGAGAGCCAGCCACGAACATATGTGGAATTCATGACTCGAGCACAAAGGTACATAAGTGTCGAGGAACTGCTGAAATCCAAACAGGAAGAGAGAGAGCCGGGGACAAAGGCTAAGGAGCCGCGGGGTCGCGCAGAACCAAAAGCCAAGTTTGACAGGTATACACCGCTAACCGTTCCACTTGAACCGGTTCTGGCTGCAATACAAGATGCACATCTATTGAAACGTCCAGAAAAGTTAAAATCAGACCCAGACAGGAGAAACATGAACAAATACTGCATGTTCCACGGAGACCATGACCACACAACCCGGGAGTGTATACAGTTAAGGGATGAAATAGAAATCTTGATCCGAGAAGGCTACCTCAAGGAATTCGTGGGGAATGACAAGGGTAAAAGACCATTACCAACAGATCAAGAAAAAGAGGCCGCGGGGGTACACCATCCACACAATGACGCGCTGGTGGTCACCCTAACGATTGCCAATGCAAAAGTTCACCAGATCCTCGTTGACAGAGGGAGTTCTGCTGATGTTCTCTCAACCACTGCGTTTGATGCAATGAAGCTAGGAAGGGATCGCCTGAAGCCGAGCCTCACACCATTGGTGGGATTCGGTGGAGAAAAGGTGAACCCGCAAGGGTGCATCGAGCTGCCAGTAACCTTTGGAGAAGGACAACAATCAATCACAAGAAACATCGACAGGAAGGTCCAAGCAACATCAGCCTCGGGAGATGGCCGAGGCCGATCATTTGTGGGATCAAGTTATCCCCTTCCAATGGAACATTGA

Coding sequence (CDS)

ATGAAAATTAATCCAAAACTTTGCTTACAAAGGGAAGCCCAAACTCATCGGACCCGAAGACAAAAGAAGCTGAATCAGCAAGACAAAAGGGTCGGAACTCTTTCCGACCCAAAACCAAGACCCTCGGCCTCGACCCAAGGGAGAGGCCGAGGATGTGGTCGGCCTTGGCAGGGCCAAAGGCCCGAGAAACCCCTCTGGGAAAAGACACCGACTGAAACCCTACCAAAAATCTATAAAAAGGGAGACGATGCACACACACAGATAAGTGCAGCAGCAATGGAGCACCAAAATCAACCAGTGACAGACGAGGCGAGCCCCTTGGATCGACTCCAAGCCCAAGAGACTGAGATCGTAGCGATTAAAGGGAGGGTGAACGAGATGGGGCAGAATTTGACTGAAATCCTTAATTTGTTGAAGAAGCCCGAGTCTATGAGGCACGAGGAAGAGCATCTGCATAGAGATCCCAAGAAGGGTAAAGGGATAGCAGACGAGGAAGTAGGGGATTCGGAGGGTGTAACTAGCCGGATGCACCATCCAAGAGATGATCAGACTCGGAAGGAAGCTGGGCCCAGCCACAAAAAGGTCCGCAGGAATTCGCCGTTGAAACGAGCACCAGGTTTGCAGGATGAGAGGTTGCTCAACTCGATCGGTGAGAGCCAGCCACGAACATATGTGGAATTCATGACTCGAGCACAAAGGTACATAAGTGTCGAGGAACTGCTGAAATCCAAACAGGAAGAGAGAGAGCCGGGGACAAAGGCTAAGGAGCCGCGGGGTCGCGCAGAACCAAAAGCCAAGTTTGACAGGTATACACCGCTAACCGTTCCACTTGAACCGGTTCTGGCTGCAATACAAGATGCACATCTATTGAAACGTCCAGAAAAGTTAAAATCAGACCCAGACAGGAGAAACATGAACAAATACTGCATGTTCCACGGAGACCATGACCACACAACCCGGGAGTGTATACAGTTAAGGGATGAAATAGAAATCTTGATCCGAGAAGGCTACCTCAAGGAATTCGTGGGGAATGACAAGGGTAAAAGACCATTACCAACAGATCAAGAAAAAGAGGCCGCGGGGGTACACCATCCACACAATGACGCGCTGGTGGTCACCCTAACGATTGCCAATGCAAAAGTTCACCAGATCCTCGTTGACAGAGGGAGTTCTGCTGATGTTCTCTCAACCACTGCGTTTGATGCAATGAAGCTAGGAAGGGATCGCCTGAAGCCGAGCCTCACACCATTGGTGGGATTCGGTGGAGAAAAGGTGAACCCGCAAGGGTGCATCGAGCTGCCAGTAACCTTTGGAGAAGGACAACAATCAATCACAAGAAACATCGACAGGAAGGTCCAAGCAACATCAGCCTCGGGAGATGGCCGAGGCCGATCATTTGTGGGATCAAGTTATCCCCTTCCAATGGAACATTGA

Protein sequence

MKINPKLCLQREAQTHRTRRQKKLNQQDKRVGTLSDPKPRPSASTQGRGRGCGRPWQGQRPEKPLWEKTPTETLPKIYKKGDDAHTQISAAAMEHQNQPVTDEASPLDRLQAQETEIVAIKGRVNEMGQNLTEILNLLKKPESMRHEEEHLHRDPKKGKGIADEEVGDSEGVTSRMHHPRDDQTRKEAGPSHKKVRRNSPLKRAPGLQDERLLNSIGESQPRTYVEFMTRAQRYISVEELLKSKQEEREPGTKAKEPRGRAEPKAKFDRYTPLTVPLEPVLAAIQDAHLLKRPEKLKSDPDRRNMNKYCMFHGDHDHTTRECIQLRDEIEILIREGYLKEFVGNDKGKRPLPTDQEKEAAGVHHPHNDALVVTLTIANAKVHQILVDRGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGEKVNPQGCIELPVTFGEGQQSITRNIDRKVQATSASGDGRGRSFVGSSYPLPMEH
Homology
BLAST of Spg023799 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 202.2 bits (513), Expect = 9.9e-48
Identity = 127/328 (38.72%), Postives = 169/328 (51.52%), Query Frame = 0

Query: 206 GLQDERLLNSIGESQPRTYVEFMTRAQRYISVEELLKSKQEEREPGTKAKEPR------- 265
           G++DE L  S G+  P T+ E ++RAQRY+S  E   SK   REP  K  +P+       
Sbjct: 319 GVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSK---REPDGKRTDPKRERSGDK 378

Query: 266 ------------GRAEPKAKFDRYTPLTVPLEPVLAAIQDAHLLKRPEKLKSDPDRRNMN 325
                        + +P  KF++YTP TVP+E VL  I+D  LLK PE++K+   +R+  
Sbjct: 379 PQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKG 438

Query: 326 KYCMFHGDHDHTTRECIQLRDEIEILIREGYLKEFVGNDKG------------------- 385
           +YC+FH DH H T++C  L++E+E LIR GYLKE+V   K                    
Sbjct: 439 RYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKATQNGESDKSPAREIRTIMG 498

Query: 386 ---------------------------------KRPLPTD-QEKEAAGVHHPHNDALVVT 445
                                             RP+  +  E EA  + HPHNDALV+ 
Sbjct: 499 GPIERESGRKRKADVREARTSREQNEVYHAYTTNRPVTIEFSEDEATHLLHPHNDALVIX 558

Query: 446 LTIANAKVHQILVDRGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGEKVNPQGCIEL 460
           L IAN KVH++LVD GSSAD++S TA+ AM L    LK S  PLVGFG E+V P+G IEL
Sbjct: 559 LKIANVKVHRVLVDGGSSADIJSWTAYKAMDLXEKVLKXSPAPLVGFGXERVIPEGRIEL 618

BLAST of Spg023799 vs. NCBI nr
Match: XP_030936700.1 (uncharacterized protein LOC115961955 [Quercus lobata])

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-44
Identity = 120/330 (36.36%), Postives = 170/330 (51.52%), Query Frame = 0

Query: 206 GLQDERLLNSIGESQPRTYVEFMTRAQRYISVEELLKSKQEER------------EPG-- 265
           G+  +  ++ + E +P+T  E +  AQ +++ E+ + +K+ ++            E G  
Sbjct: 13  GVHSDLFIHKLYEQEPQTMAELVHSAQNFMNAEDAIIAKKRKKIEKMDANPTRHSEQGPH 72

Query: 266 -----TKAKEPRGR-AEPKAKFDRYTPLTVPLEPVLAAIQDAHLLKRPEKLKSDPDRRNM 325
                T+ K+ R R A P  +  +YTPL +PL+ VL  I+D   LK PEK+K DP++RN 
Sbjct: 73  LKKGRTEDKKDRDRKAGPSVRSQQYTPLNMPLDQVLMQIKDDPSLKWPEKMKGDPNKRNR 132

Query: 326 NKYCMFHGDHDHTTRECIQLRDEIEILIREGYLKEFVGND------KGK----------- 385
           NKYC FH DH H T EC  L+ +IE LIR+G L+ F+G D      KGK           
Sbjct: 133 NKYCRFHRDHGHDTDECFDLKQQIENLIRQGKLRSFLGRDHKDEKLKGKAEESSRPPLGE 192

Query: 386 ----------------------------------RPLPTDQ------EKEAAGVHHPHND 445
                                             R   TD+      E+EA  +HHPH+D
Sbjct: 193 IRVIVGGSSTVQSSRSRKTYLKVVQSVQLSGRPPRDRDTDEQAITFTEEEAKRIHHPHDD 252

Query: 446 ALVVTLTIANAKVHQILVDRGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGEKVNPQ 459
           A+V+TL IA+    ++LVD GSSAD+L   AF  MKLGRDRL+P  +PLVGFGG KV P 
Sbjct: 253 AIVITLLIADYTTRRVLVDNGSSADILYLPAFQQMKLGRDRLRPVNSPLVGFGGMKVQPV 312

BLAST of Spg023799 vs. NCBI nr
Match: XP_030932439.1 (uncharacterized protein LOC115958186 [Quercus lobata])

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-43
Identity = 119/332 (35.84%), Postives = 168/332 (50.60%), Query Frame = 0

Query: 206 GLQDERLLNSIGESQPRTYVEFMTRAQRYISVEELLKSKQEER------------EPGTK 265
           G+  +  ++ + E +P+T  E +  AQ +++ E+ + +K+ +R            E G +
Sbjct: 13  GVHSDLFIHKLYEQEPQTMAELVHSAQNFMNAEDAIITKKRKRIEKMEANPTRHSEQGPR 72

Query: 266 AKEPRGRAE----------PKAKFDRYTPLTVPLEPVLAAIQDAHLLKRPEKLKSDPDRR 325
            K  +GR E          P A+  +YTPL +PL+ VL  ++D   LK PEK+K DP++R
Sbjct: 73  LK--KGRTEDKKDRDRKVGPSARSQQYTPLNMPLDQVLMQVKDDPSLKWPEKMKGDPNKR 132

Query: 326 NMNKYCMFHGDHDHTTRECIQLRDEIEILIREGYLKEFVGND------KGK--------- 385
           N NKYC FH DH H T EC  L+ +IE LIR+G L+ F+G D      KGK         
Sbjct: 133 NRNKYCRFHRDHGHDTDECFDLKQQIENLIRQGKLRSFLGRDHKDEKLKGKAEESSRPPL 192

Query: 386 ------------------------------------RPLPTDQ------EKEAAGVHHPH 445
                                               R   TD+      E+EA  +HHPH
Sbjct: 193 GEIRVIVGGSSAVQSSRSRKTYLKVVQSVQLSGRPPRDRDTDEQAITFTEEEAERIHHPH 252

Query: 446 NDALVVTLTIANAKVHQILVDRGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGEKVN 459
           +DA+V+TL IA+    ++LVD GSSAD+L   AF  MKLGRDRL    +PLVGFGG KV 
Sbjct: 253 DDAIVITLLIADYTTRRVLVDNGSSADILYLPAFQQMKLGRDRLCLVNSPLVGFGGAKVQ 312

BLAST of Spg023799 vs. NCBI nr
Match: XP_022155873.1 (uncharacterized protein LOC111022886 [Momordica charantia])

HSP 1 Score: 186.8 bits (473), Expect = 4.3e-43
Identity = 99/200 (49.50%), Postives = 126/200 (63.00%), Query Frame = 0

Query: 271 TPLTVPLEPVLAAIQDAHLLKRPEKLKSDPDRRNMNKYCMFHGDHDHTTRECIQLRDEIE 330
           TP TV LE VL  I+D  LLK PE++K+ P +R+  +Y +FH DH H T++C  L++E+E
Sbjct: 6   TPTTVSLEQVLMEIKDQRLLKWPERMKAPPSKRSKGQYWLFHRDHGHATQDCFDLKEEVE 65

Query: 331 ILIREGYLKEFVGNDKGKRPLPTD---------------------QEKEAAGVHHPHNDA 390
            LIR GYLKE+V + K  +    D                      E EA  + HPHNDA
Sbjct: 66  GLIRSGYLKEYVEDPKATQNGENDSNSPVREIRTIMEEQPAKLEFSEDEATHLFHPHNDA 125

Query: 391 LVVTLTIANAKVHQILVDRGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGEKVNPQG 450
           LV+TL IANAKVH+ILVD GSS  ++S TA+ AM LG   LK S  PLVGFGGE+V P+G
Sbjct: 126 LVITLKIANAKVHRILVDGGSSTYIISLTAYKAMDLGEKALKSSPVPLVGFGGERVIPEG 185

BLAST of Spg023799 vs. NCBI nr
Match: XP_030958631.1 (uncharacterized protein LOC115980538 [Quercus lobata])

HSP 1 Score: 184.5 bits (467), Expect = 2.1e-42
Identity = 114/322 (35.40%), Postives = 159/322 (49.38%), Query Frame = 0

Query: 206 GLQDERLLNSIGESQPRTYVEFMTRAQRYISVEELLKSKQEEREPGTKA----------K 265
           G+  +  ++ + E +P+T  E +  AQ +++ E+ + +K+ +R    +A          +
Sbjct: 233 GINSDLFIHKLYEKEPQTMAELVHSAQNFMNAEDAIIAKKRKRAERMEAHPARHSEQAPR 292

Query: 266 EPRGRAE-----------PKAKFDRYTPLTVPLEPVLAAIQDAHLLKRPEKLKSDPDRRN 325
             +GR E           P  +   YTPL  PL  VL  I+D   LK PEK+K DP++RN
Sbjct: 293 PKKGRTEDRKERDGRKTGPLGRSQNYTPLNAPLNQVLMQIKDDPSLKWPEKMKGDPNKRN 352

Query: 326 MNKYCMFHGDHDHTTRECIQLRDEIEILIREGYLKEFVGND------KGK---------- 385
            NKYC FH DH H T EC  L+ +IE LIR+G LK FVG D      KGK          
Sbjct: 353 KNKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDRTDEKQKGKMEESSRPPLG 412

Query: 386 -----------------------------------RPLPTDQ------EKEAAGVHHPHN 445
                                              R  P D+       ++A  +HHPH+
Sbjct: 413 EIRIIVGGNPMGQSSKSKKTYLKAVQNVQLSGRTPRTRPMDEPTISFTNEDAERIHHPHD 472

Query: 446 DALVVTLTIANAKVHQILVDRGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGEKVNP 450
           DA+V+TL IA+    ++LVD GSSADVL   AF  M+LGRD+L+   +PL+GFGG KV P
Sbjct: 473 DAIVITLLIADYTTRRVLVDNGSSADVLYYPAFQQMRLGRDQLRAVCSPLIGFGGMKVQP 532

BLAST of Spg023799 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.7e-48
Identity = 128/328 (39.02%), Postives = 169/328 (51.52%), Query Frame = 0

Query: 206 GLQDERLLNSIGESQPRTYVEFMTRAQRYISVEELLKSKQEEREPGTKAKEPR------- 265
           G++DE L  S G+  P T+ E ++RAQRY+S  E   SK   REP  K  +P+       
Sbjct: 319 GVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSK---REPDGKRTDPKRERSGDK 378

Query: 266 ------------GRAEPKAKFDRYTPLTVPLEPVLAAIQDAHLLKRPEKLKSDPDRRNMN 325
                        + +P  KF++YTP TVP+E VL  I+D  LLK PE++K+   +R+  
Sbjct: 379 PQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKG 438

Query: 326 KYCMFHGDHDHTTRECIQLRDEIEILIREGYLKEFVGNDKG------------------- 385
           +YC+FH DH H T++C  L++E+E LIR GYLKE+V   K                    
Sbjct: 439 RYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKATQNGESDKSPAREIRTIMG 498

Query: 386 ---------------------------------KRPLPTD-QEKEAAGVHHPHNDALVVT 445
                                             RP+  +  E EA  + HPHNDALV+ 
Sbjct: 499 GPIERESGRKRKADVREARTSREQNEVYHAYTTNRPVTIEFSEDEATHLLHPHNDALVIX 558

Query: 446 LTIANAKVHQILVDRGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGEKVNPQGCIEL 460
           L IAN KVH++LVD GSSAD+LS TA+ AM L    LK S  PLVGFG E+V P+G IEL
Sbjct: 559 LKIANVKVHRVLVDGGSSADILSWTAYKAMDLXEKVLKXSPAPLVGFGXERVIPEGRIEL 618

BLAST of Spg023799 vs. ExPASy TrEMBL
Match: A0A6J1DP33 (uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022886 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-43
Identity = 99/200 (49.50%), Postives = 126/200 (63.00%), Query Frame = 0

Query: 271 TPLTVPLEPVLAAIQDAHLLKRPEKLKSDPDRRNMNKYCMFHGDHDHTTRECIQLRDEIE 330
           TP TV LE VL  I+D  LLK PE++K+ P +R+  +Y +FH DH H T++C  L++E+E
Sbjct: 6   TPTTVSLEQVLMEIKDQRLLKWPERMKAPPSKRSKGQYWLFHRDHGHATQDCFDLKEEVE 65

Query: 331 ILIREGYLKEFVGNDKGKRPLPTD---------------------QEKEAAGVHHPHNDA 390
            LIR GYLKE+V + K  +    D                      E EA  + HPHNDA
Sbjct: 66  GLIRSGYLKEYVEDPKATQNGENDSNSPVREIRTIMEEQPAKLEFSEDEATHLFHPHNDA 125

Query: 391 LVVTLTIANAKVHQILVDRGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGEKVNPQG 450
           LV+TL IANAKVH+ILVD GSS  ++S TA+ AM LG   LK S  PLVGFGGE+V P+G
Sbjct: 126 LVITLKIANAKVHRILVDGGSSTYIISLTAYKAMDLGEKALKSSPVPLVGFGGERVIPEG 185

BLAST of Spg023799 vs. ExPASy TrEMBL
Match: A0A6J1DRG9 (uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023587 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.0e-42
Identity = 104/219 (47.49%), Postives = 135/219 (61.64%), Query Frame = 0

Query: 270 YTPLTVPLEPVLAAIQDAHLLKRPEKLKSDPDRRNMNKYCMFHGDHDHTTRECIQLRDEI 329
           YT  T+PLE VL  I+D  LLK PE++K+   +R+  +YC+FH DHDH T++C  L++E+
Sbjct: 2   YTLTTIPLEQVLMEIKDQRLLKWPERMKAPSTKRSKGRYCLFHRDHDHATQDCFDLKEEV 61

Query: 330 EILIREGYLKEFVGNDKGK----------------------RPLPTD-QEKEAAGVHHPH 389
           E LIR GYLKE    +K K                      RP+  +  E EA  + H H
Sbjct: 62  EGLIRRGYLKEERIWEKKKADVREARANREQNEVYHAYITDRPVTIEFSEDEATQLFHSH 121

Query: 390 NDALVVTLTIANAKVHQILVDRGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGEKVN 449
           NDALV+TL IAN KVH+ILVD GSSAD++S TA+ AM L    LK S  PLVGFGGE+V 
Sbjct: 122 NDALVITLKIANVKVHRILVDGGSSADIISWTAYKAMDLEEKVLKSSPAPLVGFGGERVI 181

Query: 450 PQGCIELPVTFGEGQQSITRNID-RKVQATSASGDGRGR 465
            +G IELPVTFG G + +T+ +D   V  TS+  +  GR
Sbjct: 182 SEGRIELPVTFGSGPKGVTKMVDFLVVNYTSSYNEILGR 220

BLAST of Spg023799 vs. ExPASy TrEMBL
Match: A0A6J1DAK4 (uncharacterized protein LOC111018902 OS=Momordica charantia OX=3673 GN=LOC111018902 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.9e-42
Identity = 96/194 (49.48%), Postives = 120/194 (61.86%), Query Frame = 0

Query: 275 VPLEPVLAAIQDAHLLKRPEKLKSDPDRRNMNKYCMFHGDHDHTTRECIQLRDEIEILIR 334
           VPLE V   I+D  LLK PE++K+ P +R   +YC FH DH H T++C  L++E+E LI+
Sbjct: 2   VPLEQVFVEIKDQRLLKWPERMKAPPSKRGKGRYCPFHLDHSHATQDCFDLKEEVEGLIQ 61

Query: 335 EGYLKEFVGNDKGKRPLPTDQ-------------------EKEAAGVHHPHNDALVVTLT 394
            GYLKE+V + K  +     Q                   E E   + HPHNDALV+ L 
Sbjct: 62  RGYLKEYVKDPKATQNKRERQAYKIYHAFVEEQPTKIEFLEDEVTHIFHPHNDALVINLK 121

Query: 395 IANAKVHQILVDRGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGEKVNPQGCIELPV 450
           IANAKVH ILVD GSS D++S TA+  M LG   LK S  PLVGFGGE V P+G IELPV
Sbjct: 122 IANAKVHWILVDGGSSPDIISLTAYKTMDLGERGLKSSPAPLVGFGGEWVIPEGRIELPV 181

BLAST of Spg023799 vs. ExPASy TrEMBL
Match: A0A7N2N013 (Ribonuclease H OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.0e-38
Identity = 108/322 (33.54%), Postives = 163/322 (50.62%), Query Frame = 0

Query: 206 GLQDERLLNSIGESQPRTYVEFMTRAQRYISVEELLKSKQE---EREPGTKAKEPRGRAE 265
           GL+  + L S+ ++ P+T  E + RA +Y++ E+ L S+++   +R+    +++ +GR +
Sbjct: 277 GLKGGKFLFSLYKNDPKTMSEVLYRATKYMNAEDALLSREDRPKKRDRPEDSRQDQGRKK 336

Query: 266 -----------PK---AKFDRYTPLTVPLEPVLAAIQDAHLLKRPEKLKSDPDRRNMNKY 325
                      PK    +F  +TPL  P++ VL  I+D   L  P KLKSDP +R+ +KY
Sbjct: 337 GRMGDRREDRRPKPMSGRFANFTPLNAPIDQVLMQIKDEGSLTFPGKLKSDPSKRSRDKY 396

Query: 326 CMFHGDHDHTTRECIQLRDEIEILIREGYLKEFV-------------------------- 385
           C FH DH H T +C  L+ +IE LIR+G L++FV                          
Sbjct: 397 CRFHRDHGHDTADCYDLKQQIEALIRQGKLQKFVNKGRTDQPPQEQHLRRENERPRPPIG 456

Query: 386 ------------GNDK------------------------GKRPLPTDQEKEAAGVHHPH 445
                       G+ K                        G+ P+    E++A  +HHPH
Sbjct: 457 DIRMIVGGTAAAGSSKKARKTYLRMVQNVQLTSRVPRIANGEEPIVGFTEEDARRLHHPH 516

Query: 446 NDALVVTLTIANAKVHQILVDRGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGEKVN 449
           +DALVV++   +  VH++L+D GSSAD+L   AF  M++ RD L P+  PLVGFGG KV 
Sbjct: 517 DDALVVSVRTGDYNVHRVLIDNGSSADILYYPAFQQMRIDRDLLIPTDAPLVGFGGSKVF 576

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158830.19.9e-4838.72uncharacterized protein LOC111025293 [Momordica charantia][more]
XP_030936700.11.3e-4436.36uncharacterized protein LOC115961955 [Quercus lobata][more]
XP_030932439.11.1e-4335.84uncharacterized protein LOC115958186 [Quercus lobata][more]
XP_022155873.14.3e-4349.50uncharacterized protein LOC111022886 [Momordica charantia][more]
XP_030958631.12.1e-4235.40uncharacterized protein LOC115980538 [Quercus lobata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DWY03.7e-4839.02uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DP332.1e-4349.50uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DRG93.0e-4247.49uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DAK43.9e-4249.48uncharacterized protein LOC111018902 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A7N2N0132.0e-3833.54Ribonuclease H OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..215
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 372..445
e-value: 8.41558E-6
score: 42.3236

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg023799.1Spg023799.1mRNA