Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAATCCCTATGGAAGTCCATCTGGAATCTCAATTGCCTCCCTAGAGCTAAAATCATGGTTTGGAAAGTGGTTAAGGATATTCTTCCTACCCAATTGAATATTATCAAAATAGAGGCGTAAATACTAACTCTCTGTGTCTTCTTTACAGGACAAAAAGGGAGTCGACAGGGCATATTTTCTGGTCTTGTAAGGTGGCTAGGAAGGTTTGGGTTTTTTTCTTCCCGGTCTTAAAAAGTTTTCTTAATTCTGTTAGGGATTGCTGGACTCCCCCAGACTATTGGCAAAGGCTTGCTAGCATTCTCAACATCAGAGATCAAAACAAAGCGGCCATTATCATCTGGTGCCTCTGGTTCGAAAGAAATTCAAGCAAGCATAGTGGGAAGATGGCAGATATAGAGAAAATAATCCTATCCATCAGTAAATATTTAGAAGAGTTTGAAAGGAAAGTAGTACCTGCTCGCTCGTCGGATCGATCAGAGAATCAAGCGAGTCATGGCAGTTGGTCCCCGCCGGCATCTGGTTCCTTTAAATTGAACGCCGATGCCTCCTGGTGTGATCGCTCAAATTCAGGAGGGGTGGGGTGCATTCTCCGTGACTCGAATGGTTCTCTCATCTTGGCGGGCTGCAAGCAGATTCCCTATCGATGGGATATTAAAACCCTCGAATCTTATGCCATTCATGAAGGGTTAGAGTCTTACGTGAAGGCTCTGGAAGAACTAGATCTCAGACAAAAGCCCCCCCTTGAGGTTGAGTTGGACTCCAGTGCGGCGATTAAAGCGATCACCCGTGCAGAAGAAGATCAATCGGAGCTCTCATTGTTCGTTGAGGGAGTCACTGATCTGATCCCAGCAGCAAACGCCGTCCGGTTTTCTAAATGCTCGAGAGCAGCGAATGTAGGCGCACACAATTTGGTGCGAGCAAGTCTTCAAGTTGGGGATTTTAGTTTTTTTGGGCGTTTCTTGTCCCCTAATTTCGTTCATTCTTTTTTGGAAAGGGAGGTCCGTCTCCCTAACTGGTTTTCTTCTATTTTAGAAGAAATTGATTGTAGTTTGGTTCCTTCTCTCTAA
mRNA sequence
ATGCCAAATCCCTATGGAAGTCCATCTGGAATCTCAATTGCCTCCCTAGAGCTAAAATCATGGTTTGGAAAGACAAAAAGGGAGTCGACAGGGCATATTTTCTGGTCTTGTAAGGTGGCTAGGAAGGTTTGGGTTTTTTTCTTCCCGGTCTTAAAAAGTTTTCTTAATTCTGTTAGGGATTGCTGGACTCCCCCAGACTATTGGCAAAGGCTTGCTAGCATTCTCAACATCAGAGATCAAAACAAAGCGGCCATTATCATCTGGTGCCTCTGGTTCGAAAGAAATTCAAGCAAGCATAGTGGGAAGATGGCAGATATAGAGAAAATAATCCTATCCATCAGTAAATATTTAGAAGAGTTTGAAAGGAAAGTAGTACCTGCTCGCTCGTCGGATCGATCAGAGAATCAAGCGAGTCATGGCAGTTGGTCCCCGCCGGCATCTGGTTCCTTTAAATTGAACGCCGATGCCTCCTGGTGTGATCGCTCAAATTCAGGAGGGGTGGGGTGCATTCTCCGTGACTCGAATGGTTCTCTCATCTTGGCGGGCTGCAAGCAGATTCCCTATCGATGGGATATTAAAACCCTCGAATCTTATGCCATTCATGAAGGGTTAGAGTCTTACGTGAAGGCTCTGGAAGAACTAGATCTCAGACAAAAGCCCCCCCTTGAGGTTGAGTTGGACTCCAGTGCGGCGATTAAAGCGATCACCCGTGCAGAAGAAGATCAATCGGAGCTCTCATTGTTCGTTGAGGGAGTCACTGATCTGATCCCAGCAGCAAACGCCGTCCGGTTTTCTAAATGCTCGAGAGCAGCGAATGTAGGCGCACACAATTTGGTGCGAGCAAGTCTTCAAGTTGGGGATTTTAGTTTTTTTGGGCGTTTCTTGTCCCCTAATTTCGTTCATTCTTTTTTGGAAAGGGAGGTCCGTCTCCCTAACTGGTTTTCTTCTATTTTAGAAGAAATTGATTGTAGTTTGGTTCCTTCTCTCTAA
Coding sequence (CDS)
ATGCCAAATCCCTATGGAAGTCCATCTGGAATCTCAATTGCCTCCCTAGAGCTAAAATCATGGTTTGGAAAGACAAAAAGGGAGTCGACAGGGCATATTTTCTGGTCTTGTAAGGTGGCTAGGAAGGTTTGGGTTTTTTTCTTCCCGGTCTTAAAAAGTTTTCTTAATTCTGTTAGGGATTGCTGGACTCCCCCAGACTATTGGCAAAGGCTTGCTAGCATTCTCAACATCAGAGATCAAAACAAAGCGGCCATTATCATCTGGTGCCTCTGGTTCGAAAGAAATTCAAGCAAGCATAGTGGGAAGATGGCAGATATAGAGAAAATAATCCTATCCATCAGTAAATATTTAGAAGAGTTTGAAAGGAAAGTAGTACCTGCTCGCTCGTCGGATCGATCAGAGAATCAAGCGAGTCATGGCAGTTGGTCCCCGCCGGCATCTGGTTCCTTTAAATTGAACGCCGATGCCTCCTGGTGTGATCGCTCAAATTCAGGAGGGGTGGGGTGCATTCTCCGTGACTCGAATGGTTCTCTCATCTTGGCGGGCTGCAAGCAGATTCCCTATCGATGGGATATTAAAACCCTCGAATCTTATGCCATTCATGAAGGGTTAGAGTCTTACGTGAAGGCTCTGGAAGAACTAGATCTCAGACAAAAGCCCCCCCTTGAGGTTGAGTTGGACTCCAGTGCGGCGATTAAAGCGATCACCCGTGCAGAAGAAGATCAATCGGAGCTCTCATTGTTCGTTGAGGGAGTCACTGATCTGATCCCAGCAGCAAACGCCGTCCGGTTTTCTAAATGCTCGAGAGCAGCGAATGTAGGCGCACACAATTTGGTGCGAGCAAGTCTTCAAGTTGGGGATTTTAGTTTTTTTGGGCGTTTCTTGTCCCCTAATTTCGTTCATTCTTTTTTGGAAAGGGAGGTCCGTCTCCCTAACTGGTTTTCTTCTATTTTAGAAGAAATTGATTGTAGTTTGGTTCCTTCTCTCTAA
Protein sequence
MPNPYGSPSGISIASLELKSWFGKTKRESTGHIFWSCKVARKVWVFFFPVLKSFLNSVRDCWTPPDYWQRLASILNIRDQNKAAIIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQASHGSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPYRWDIKTLESYAIHEGLESYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSELSLFVEGVTDLIPAANAVRFSKCSRAANVGAHNLVRASLQVGDFSFFGRFLSPNFVHSFLEREVRLPNWFSSILEEIDCSLVPSL
Homology
BLAST of Spg023506 vs. NCBI nr
Match:
XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia])
HSP 1 Score: 115.9 bits (289), Expect = 6.5e-22
Identity = 72/220 (32.73%), Postives = 109/220 (49.55%), Query Frame = 0
Query: 24 KTKRESTGHIFWSCKVARKVWVFFFPVLKSFLNSVRDCWTPPDYWQRLASILNIRDQNKA 83
+ K E+T HI W CKV + +W+ P+ +F R WT +YW+ L ++ ++
Sbjct: 131 RKKEETTQHILWECKVIKDIWINCTPIEANFFYIDRTNWTTKEYWEWLMDKAGEEERRRS 190
Query: 84 AIIIWCLWFERNSSKHSGKMADIEKIILSISKYL--EEFERKVVPARSSD----RSENQA 143
II +W RN S G ++ I L+I +Y+ + + +S D R
Sbjct: 191 MIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKRKSKDFHPIRRIGDN 250
Query: 144 SHGSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPYRWDIKTLES 203
+ W PP S S+KLN DA+W +N+ G+G ILRD G +I GC+ I +I LE
Sbjct: 251 TRARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEVIKTGCRIIRAERNITYLEV 310
Query: 204 YAIHEGLESYVKALEELDLRQKPPLEVELDSSAAIKAITR 238
AI EGL +A+ + R P+ +E DS AI + R
Sbjct: 311 MAICEGL----RAIRQEHCR---PIHLESDSLEAIHLLHR 343
BLAST of Spg023506 vs. NCBI nr
Match:
OMO62153.1 (reverse transcriptase [Corchorus capsularis])
HSP 1 Score: 110.2 bits (274), Expect = 3.5e-20
Identity = 78/261 (29.89%), Postives = 122/261 (46.74%), Query Frame = 0
Query: 28 ESTGHIFWSCKVARKVWVFFFPVLKSFLNSVRDCWTPPD-YWQ-RLASILNIRDQNKAAI 87
+S HIF+SC +++VW P L+++LN+ W D W+ L N+ +
Sbjct: 697 DSLFHIFFSCPFSQRVWDTVCPWLRNYLNN----WERRDKSWECLLIKAQNLGTIEIVCV 756
Query: 88 IIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQASHGSWSPP 147
++W LW RN H A +++ ++ + E E+ R + Q WSPP
Sbjct: 757 VLWLLWMNRNKVIHERICALPSVLVIKATRLVHEMEQS--QCRRENNGVLQRMVHVWSPP 816
Query: 148 ASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPYRWDIKTLESYAIHEGLE 207
A FK+NADA + N G+G ++RDS G + L +I + D+ E YA+ GL
Sbjct: 817 ARNCFKVNADAVFHASRNEAGLGVVIRDSRGVVFLCATARIDHVRDVLFAEIYALQFGL- 876
Query: 208 SYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSELSLFVEGVTDLIPAANAVRFS 267
K+ +D EVE DSS AI I + E E + V+ + + ++ +FS
Sbjct: 877 LVAKSYNLVD------CEVESDSSLAISEINKLEGSLWEGGVLVDQIRHIASLFHSCKFS 936
Query: 268 KCSRAANVGAHNLVRASLQVG 287
+R AN AH L +VG
Sbjct: 937 YVNRVANKFAHELAHLDCEVG 944
BLAST of Spg023506 vs. NCBI nr
Match:
XP_023880912.1 (uncharacterized protein LOC111993298 [Quercus suber])
HSP 1 Score: 103.2 bits (256), Expect = 4.3e-18
Identity = 69/262 (26.34%), Postives = 113/262 (43.13%), Query Frame = 0
Query: 27 RESTGHIFWSCKVARKVWVFFFPVLKSFLNSVRDCWTPPDYWQRLASILNIRDQNK---- 86
+E+ H WSC+ +++W F ++ T Y Q + ++N+ Q
Sbjct: 896 QETAFHALWSCESLKEIWNPCFSWVR----------TEVPYLQDMLELINLVGQRANGLE 955
Query: 87 -AAIIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQASHGS 146
++ WC+W RN + + K +K+ + YL +F+ K R R EN
Sbjct: 956 LFGVVAWCIWTYRNKLRLNEKGVPSDKLFETARSYLLDFQSKFQVTRGQQRKENT----K 1015
Query: 147 WSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPYRWDIKTLESYAIH 206
W PP G FK N D + S G+G I+RDS G ++ A ++IPY ++ LE+ A
Sbjct: 1016 WLPPGDGLFKANYDGAVFAESEEAGIGVIVRDSKGDVLAALAEKIPYLGSVEVLEALAAR 1075
Query: 207 EGLESYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSELSLFVEGVTDLIPAANA 266
K + EL L E E DS A+ A E S + + ++ ++ +
Sbjct: 1076 RA----AKFVVELGL---TAAEFEGDSEVVWTALKVANEAHSAMGVIIKDTLSIVGSLRT 1135
Query: 267 VRFSKCSRAANVGAHNLVRASL 284
FS R N AH L + ++
Sbjct: 1136 FSFSHTRRQGNCVAHALAKRAI 1136
BLAST of Spg023506 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 99.8 bits (247), Expect = 4.8e-17
Identity = 83/286 (29.02%), Postives = 130/286 (45.45%), Query Frame = 0
Query: 26 KRESTGHIFWSCKVARKVWVFFFPVLKSFLNSVRDCWTPPDYWQRLASILNIRDQNKAAI 85
+RES H F+ CK AR++W FP L S D + + W L L +D N AAI
Sbjct: 1179 RRESIIHAFFHCKRARQIWRTLFPFLTCL--SAEDNISFLELWSSLTEQLEPKDLNLAAI 1238
Query: 86 IIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQASHGS---- 145
W +W +RNS H +++ +E ++ +L+ + + S+ Q++H
Sbjct: 1239 TGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQM---SNYSPRTQSNHRPVVQY 1298
Query: 146 WSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPYRWDIKTLESYAIH 205
W P +S S KLN DA+ C R S GCI+RDS+ SL+ A ++P+ E I
Sbjct: 1299 WRPSSSVSLKLNTDAA-C-RGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCIL 1358
Query: 206 EGLESYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSELSLFVEGVTDLIPAANA 265
EGL+ + LEVE DS AI+ I + + +V + L
Sbjct: 1359 EGLKFAAAS-------NFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAF 1418
Query: 266 VRFSKCSRAANVGAHNLVRASLQVGDFSFFGRFLSPNFVHSFLERE 308
+ FS SR N AH L + + ++ F P ++ ++R+
Sbjct: 1419 ISFSHSSRQCNRAAHGLAKWGITSPSATYAWLFNFPTWLLDLVQRD 1450
BLAST of Spg023506 vs. NCBI nr
Match:
XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])
HSP 1 Score: 99.0 bits (245), Expect = 8.2e-17
Identity = 68/220 (30.91%), Postives = 108/220 (49.09%), Query Frame = 0
Query: 79 DQNKAAIIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQAS 138
++ ++ II W +W RN S G ++ I L I +Y+ + +S N+
Sbjct: 8 ERRRSMIIAWQIWEMRNKSIFKGVHSETRDIQLVIDRYIINSAGR--DTNLKGKSANKDL 67
Query: 139 H----------GSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPY 198
H W PP S S+KLN DA+W +N+GG+G ILRD G +I A C+ I
Sbjct: 68 HLIRRIGDNTGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRT 127
Query: 199 RWDIKTLESYAIHEGL----ESYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSE 258
+I LE AI EGL + + + +++ R P+ +E DS AI + R +DQ+E
Sbjct: 128 ERNITYLEVMAICEGLRAIRQEHCRPIQQEHCR---PIHLESDSLEAIHLLHRQCQDQTE 187
Query: 259 LSLFVEGVTDLIPAANAVRFSKCSRAANVGAHNLVRASLQ 285
+ +E + ++ V SR AN AH+L R +++
Sbjct: 188 IIWLLEEIWQMMEDMKIVSMRHISREANKVAHDLARRAME 222
BLAST of Spg023506 vs. ExPASy TrEMBL
Match:
A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)
HSP 1 Score: 115.9 bits (289), Expect = 3.1e-22
Identity = 72/220 (32.73%), Postives = 109/220 (49.55%), Query Frame = 0
Query: 24 KTKRESTGHIFWSCKVARKVWVFFFPVLKSFLNSVRDCWTPPDYWQRLASILNIRDQNKA 83
+ K E+T HI W CKV + +W+ P+ +F R WT +YW+ L ++ ++
Sbjct: 131 RKKEETTQHILWECKVIKDIWINCTPIEANFFYIDRTNWTTKEYWEWLMDKAGEEERRRS 190
Query: 84 AIIIWCLWFERNSSKHSGKMADIEKIILSISKYL--EEFERKVVPARSSD----RSENQA 143
II +W RN S G ++ I L+I +Y+ + + +S D R
Sbjct: 191 MIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKRKSKDFHPIRRIGDN 250
Query: 144 SHGSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPYRWDIKTLES 203
+ W PP S S+KLN DA+W +N+ G+G ILRD G +I GC+ I +I LE
Sbjct: 251 TRARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEVIKTGCRIIRAERNITYLEV 310
Query: 204 YAIHEGLESYVKALEELDLRQKPPLEVELDSSAAIKAITR 238
AI EGL +A+ + R P+ +E DS AI + R
Sbjct: 311 MAICEGL----RAIRQEHCR---PIHLESDSLEAIHLLHR 343
BLAST of Spg023506 vs. ExPASy TrEMBL
Match:
A0A1R3GVP2 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23000 PE=4 SV=1)
HSP 1 Score: 110.2 bits (274), Expect = 1.7e-20
Identity = 78/261 (29.89%), Postives = 122/261 (46.74%), Query Frame = 0
Query: 28 ESTGHIFWSCKVARKVWVFFFPVLKSFLNSVRDCWTPPD-YWQ-RLASILNIRDQNKAAI 87
+S HIF+SC +++VW P L+++LN+ W D W+ L N+ +
Sbjct: 697 DSLFHIFFSCPFSQRVWDTVCPWLRNYLNN----WERRDKSWECLLIKAQNLGTIEIVCV 756
Query: 88 IIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQASHGSWSPP 147
++W LW RN H A +++ ++ + E E+ R + Q WSPP
Sbjct: 757 VLWLLWMNRNKVIHERICALPSVLVIKATRLVHEMEQS--QCRRENNGVLQRMVHVWSPP 816
Query: 148 ASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPYRWDIKTLESYAIHEGLE 207
A FK+NADA + N G+G ++RDS G + L +I + D+ E YA+ GL
Sbjct: 817 ARNCFKVNADAVFHASRNEAGLGVVIRDSRGVVFLCATARIDHVRDVLFAEIYALQFGL- 876
Query: 208 SYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSELSLFVEGVTDLIPAANAVRFS 267
K+ +D EVE DSS AI I + E E + V+ + + ++ +FS
Sbjct: 877 LVAKSYNLVD------CEVESDSSLAISEINKLEGSLWEGGVLVDQIRHIASLFHSCKFS 936
Query: 268 KCSRAANVGAHNLVRASLQVG 287
+R AN AH L +VG
Sbjct: 937 YVNRVANKFAHELAHLDCEVG 944
BLAST of Spg023506 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 99.8 bits (247), Expect = 2.3e-17
Identity = 83/286 (29.02%), Postives = 130/286 (45.45%), Query Frame = 0
Query: 26 KRESTGHIFWSCKVARKVWVFFFPVLKSFLNSVRDCWTPPDYWQRLASILNIRDQNKAAI 85
+RES H F+ CK AR++W FP L S D + + W L L +D N AAI
Sbjct: 1179 RRESIIHAFFHCKRARQIWRTLFPFLTCL--SAEDNISFLELWSSLTEQLEPKDLNLAAI 1238
Query: 86 IIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQASHGS---- 145
W +W +RNS H +++ +E ++ +L+ + + S+ Q++H
Sbjct: 1239 TGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQM---SNYSPRTQSNHRPVVQY 1298
Query: 146 WSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPYRWDIKTLESYAIH 205
W P +S S KLN DA+ C R S GCI+RDS+ SL+ A ++P+ E I
Sbjct: 1299 WRPSSSVSLKLNTDAA-C-RGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCIL 1358
Query: 206 EGLESYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSELSLFVEGVTDLIPAANA 265
EGL+ + LEVE DS AI+ I + + +V + L
Sbjct: 1359 EGLKFAAAS-------NFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAF 1418
Query: 266 VRFSKCSRAANVGAHNLVRASLQVGDFSFFGRFLSPNFVHSFLERE 308
+ FS SR N AH L + + ++ F P ++ ++R+
Sbjct: 1419 ISFSHSSRQCNRAAHGLAKWGITSPSATYAWLFNFPTWLLDLVQRD 1450
BLAST of Spg023506 vs. ExPASy TrEMBL
Match:
A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 4.0e-17
Identity = 68/220 (30.91%), Postives = 108/220 (49.09%), Query Frame = 0
Query: 79 DQNKAAIIIWCLWFERNSSKHSGKMADIEKIILSISKYLEEFERKVVPARSSDRSENQAS 138
++ ++ II W +W RN S G ++ I L I +Y+ + +S N+
Sbjct: 8 ERRRSMIIAWQIWEMRNKSIFKGVHSETRDIQLVIDRYIINSAGR--DTNLKGKSANKDL 67
Query: 139 H----------GSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPY 198
H W PP S S+KLN DA+W +N+GG+G ILRD G +I A C+ I
Sbjct: 68 HLIRRIGDNTGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRT 127
Query: 199 RWDIKTLESYAIHEGL----ESYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSE 258
+I LE AI EGL + + + +++ R P+ +E DS AI + R +DQ+E
Sbjct: 128 ERNITYLEVMAICEGLRAIRQEHCRPIQQEHCR---PIHLESDSLEAIHLLHRQCQDQTE 187
Query: 259 LSLFVEGVTDLIPAANAVRFSKCSRAANVGAHNLVRASLQ 285
+ +E + ++ V SR AN AH+L R +++
Sbjct: 188 IIWLLEEIWQMMEDMKIVSMRHISREANKVAHDLARRAME 222
BLAST of Spg023506 vs. ExPASy TrEMBL
Match:
A0A803PUL2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 4.0e-17
Identity = 74/275 (26.91%), Postives = 126/275 (45.82%), Query Frame = 0
Query: 28 ESTGHIFWSCKVARKVWVFFFPVLKSFLNSVRDCWTPPDYWQRLASILNIRDQNKAAIII 87
ESTGH +SCK A+ VW + SF S DY L+S+ N + + +
Sbjct: 1108 ESTGHALFSCKYAKAVW---RSLGLSFNWSAAASMKNGDYVTHLSSMYNKTEMEQLFCTM 1167
Query: 88 WCLWFERNSSKHSGKMADIEKIILSISKYLEEFE-------------RKVVPARSSDRSE 147
W +W ERN+ H K + + S +L+ F PA
Sbjct: 1168 WAIWIERNNIIHGKKARCAQNLAAFASVFLQNFRAAQQRSCAAIPVTTPATPALPHQPLP 1227
Query: 148 NQASHGSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIPYRWDIKT 207
++ +W PPA+G+FKLN DA+ ++ G+G +LR++NG + A +P ++K+
Sbjct: 1228 RLSASAAWHPPAAGTFKLNTDAAVDISTHKTGLGAVLRNANGHVKAA--LSMPMLDNLKS 1287
Query: 208 --LESYAIHEGLESYVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQSELSLFVEGV 267
+E+ ++ GL ++ +D ++E+D+ + A+ SE S + V
Sbjct: 1288 HEMEAKSLFYGLNWALQHHLPID-------QIEMDALMVVNALKAPFNSNSEFSDLILDV 1347
Query: 268 TDLIPAANAVRFSKCSRAANVGAHNLVRASLQVGD 288
L+ + VR S +R AN AH L + +L+V +
Sbjct: 1348 LSLLSFFSNVRVSHVNRVANSAAHGLAKFALRVDE 1370
BLAST of Spg023506 vs. TAIR 10
Match:
AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 44.3 bits (103), Expect = 2.2e-04
Identity = 42/179 (23.46%), Postives = 77/179 (43.02%), Query Frame = 0
Query: 128 RSSDRSENQASHGSWSPPASGSFKLNADASWCDRSNSGGVGCILRDSNGSLILAGCKQIP 187
++ +R+ + + + WSPP K N DAS +R+ G+G ILR+S G++I G +
Sbjct: 91 QNGNRNADPSRNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQ 150
Query: 188 YRWDIKTLESYAIHEGLES-----YVKALEELDLRQKPPLEVELDSSAAIKAITRAEEDQ 247
R + E + +++ + K + E D + I + +
Sbjct: 151 GRMTTEEAECSTLIWAIQASYGFGHKKVIFEGD-------------NQTITRMINTKSSN 210
Query: 248 SELSLFVEGVTDLIPAANAVRFSKCSRAANVGAHNLVRASLQVG-DFSFFGR---FLSP 298
L F++ + IP+ ++ FS R N A L + +++ +S F FLSP
Sbjct: 211 PRLQHFLDTIQSWIPSFESIEFSFKHREQNGCADFLAKQAIKENTQWSLFHSCPYFLSP 256
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DL64 | 3.1e-22 | 32.73 | uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A1R3GVP2 | 1.7e-20 | 29.89 | Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23000 PE=4 SV... | [more] |
A0A6J1DX30 | 2.3e-17 | 29.02 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1DSV1 | 4.0e-17 | 30.91 | uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A803PUL2 | 4.0e-17 | 26.91 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G65005.1 | 2.2e-04 | 23.46 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |