Spg023151 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023151
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold13: 13854852 .. 13855780 (+)
RNA-Seq Expression	Spg023151
Synteny	Spg023151

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAACAAGAGCGCGGAAAGAAAGGGAGAATGAGGAAGAAGAGGTACCTGTTACCCCTGAAGTGCAGAAAGTTAAAGCGAAAAAGAAAAAAACCCCGGAGGAGAAAGAAGCCAAAAGACGAAGACGACAACAGAGGGCTGAGGAACAAGAAAAGGCAACAGAGGTTGTTGCTGCCACAGTTGAAGAAGGAGACCCGCAAGAACCTGATGGACAGAACCCAGAGGAGGCTGAGCAGAGAGTCGCGGATACGGAAGAAGGGGGGCGAACAAAAGAAGTTCAAGAGGAGAGAACCGAGGAAGTTCAAGAAGAAATTACAGAGGAAGTTCAAGAACAGCAGGACGAGGATGTTCAAATGAACAGGCAGAAGAGGTTAAGGTACCGGATAATGAGCCAGTGCAGGACGCTCAAGTAGAGGTGATCATGCCGGAGGTGCCAAAGCGTCACCGCGTTAAGAGGAAAGCAGGTCGCGCTAGGGTTGTCCAAACTGATACTCCTTCGCCTCTGACCACGGATTCTGAAAGAGAGAATGCAGAGAGAGTAGAGCGTGAGAAGAAGGAAGCCGAGGGAAGAGCAAGAGAAGAGGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGAGGAAAAGGGCAAAAATGTTGCTGGAGCATCAGAAGAGCAACAGTTACTGGATGATCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTTCTGAAAAGGGACTTCCTGTTTGAGAGGGGATTTAGTGGTAAGCTTCCGCATTTTCTGAGGACTGGTATTGCGAATCATGGATTGGAACGATTCTGTTCAAAACCCGAATCTGTAAACGTGCAGTTAGTGCGCGAATTCTATGCAAATATCGACCGAGAAGAAGGTTTCCTAGCAGTTGTTCGAGGTATTGAGGTCGACTAG

mRNA sequence

ATGGCGAAAACAAGAGCGCGGAAAGAAAGGGAGAATGAGGAAGAAGAGGTACCTGTTACCCCTGAAGTGCAGAAAGTTAAAGCGAAAAAGAAAAAAACCCCGGAGGAGAAAGAAGCCAAAAGACGAAGACGACAACAGAGGGCTGAGGAACAAGAAAAGGCAACAGAGGTTGTTGCTGCCACAGTTGAAGAAGGAGACCCGCAAGAACCTGATGGACAGAACCCAGAGGAGGCTGAGCAGAGAGTCGCGGATACGGAAGAAGGGGGGCGAACAAAAGAAGTTCAAGAGGAGAGAACCGAGGAAGTTCAAGAAGAAATTACAGAGGAAGTTCAAGAACAGCAGGACGAGGATGTTCAAATGAACAGGCAGAAGAGGTTAAGGAAAGCAGGTCGCGCTAGGGTTGTCCAAACTGATACTCCTTCGCCTCTGACCACGGATTCTGAAAGAGAGAATGCAGAGAGAGTAGAGCGTGAGAAGAAGGAAGCCGAGGGAAGAGCAAGAGAAGAGGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGAGGAAAAGGGCAAAAATGTTGCTGGAGCATCAGAAGAGCAACAGTTACTGGATGATCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTTCTGAAAAGGGACTTCCTGTTTGAGAGGGGATTTAGTGGTAAGCTTCCGCATTTTCTGAGGACTGGTATTGCGAATCATGGATTGGAACGATTCTGTTCAAAACCCGAATCTGTAAACGTGCAGTTAGTGCGCGAATTCTATGCAAATATCGACCGAGAAGAAGGTTTCCTAGCAGTTGTTCGAGGTATTGAGGTCGACTAG

Coding sequence (CDS)

ATGGCGAAAACAAGAGCGCGGAAAGAAAGGGAGAATGAGGAAGAAGAGGTACCTGTTACCCCTGAAGTGCAGAAAGTTAAAGCGAAAAAGAAAAAAACCCCGGAGGAGAAAGAAGCCAAAAGACGAAGACGACAACAGAGGGCTGAGGAACAAGAAAAGGCAACAGAGGTTGTTGCTGCCACAGTTGAAGAAGGAGACCCGCAAGAACCTGATGGACAGAACCCAGAGGAGGCTGAGCAGAGAGTCGCGGATACGGAAGAAGGGGGGCGAACAAAAGAAGTTCAAGAGGAGAGAACCGAGGAAGTTCAAGAAGAAATTACAGAGGAAGTTCAAGAACAGCAGGACGAGGATGTTCAAATGAACAGGCAGAAGAGGTTAAGGAAAGCAGGTCGCGCTAGGGTTGTCCAAACTGATACTCCTTCGCCTCTGACCACGGATTCTGAAAGAGAGAATGCAGAGAGAGTAGAGCGTGAGAAGAAGGAAGCCGAGGGAAGAGCAAGAGAAGAGGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGAGGAAAAGGGCAAAAATGTTGCTGGAGCATCAGAAGAGCAACAGTTACTGGATGATCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTTCTGAAAAGGGACTTCCTGTTTGAGAGGGGATTTAGTGGTAAGCTTCCGCATTTTCTGAGGACTGGTATTGCGAATCATGGATTGGAACGATTCTGTTCAAAACCCGAATCTGTAAACGTGCAGTTAGTGCGCGAATTCTATGCAAATATCGACCGAGAAGAAGGTTTCCTAGCAGTTGTTCGAGGTATTGAGGTCGACTAG

Protein sequence

MAKTRARKERENEEEEVPVTPEVQKVKAKKKKTPEEKEAKRRRRQQRAEEQEKATEVVAATVEEGDPQEPDGQNPEEAEQRVADTEEGGRTKEVQEERTEEVQEEITEEVQEQQDEDVQMNRQKRLRKAGRARVVQTDTPSPLTTDSERENAERVEREKKEAEGRAREEAEKKAEEERLLKRREEKGKNVAGASEEQQLLDDRFVNNFARAKYAELLKRDFLFERGFSGKLPHFLRTGIANHGLERFCSKPESVNVQLVREFYANIDREEGFLAVVRGIEVD

Homology

The following BLAST results are available for this feature:

BLAST of Spg023151 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023151 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023151 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023151 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..187
None	No IPR available	COILS	Coil	Coil	coord: 92..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023151.1	Spg023151.1	mRNA