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Spg023072 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCATCTCGACGCTGCGACAGCTCCAGGGGCAGAATGGTCTTTTTACGCTCCGGTTTTGCTCGTTTAAGCCCCGAATCGCTTTCGAAGCTCCAGTGAGGACCTATAGACATATTATACTCATTTTAAAGCATTTTTCGCAAGGAATTCAACTAAGATAAGCAAATTGGGAGATTCTAAGTGTAAAATAAATTGTACTTATCACTTACTAATCACGGTTATATCGGGTGGACAGAAATATATCTACAGTGAGGGGAGTTTAGCTACACGCTATAGTGGAGTGTCCTGTTAGTTAACGAATGTTGGTTAACTAGGATTGAAAGAGTTCAACCGATTAATCTCGAATCGTTGGAGCCCATGATCTGTAGATTCATTAGGTCCCCCTGCTAGCTCAATCGAATCTAACCTTAGAACAGAGTGATAAAAGAATTTGAAACATGTTCAAATTCGATTAAGGGAGATATTGTTAATTATATTCGATATAATTTAACTCGTCGGTTTAATTACGAATTAAACTATATTTTGAGAGAGTTATTATTATTTAAATATGATTTAAATATAACTCATATGAATACGGATTCATGTTCGAGATAATTGGTTTTGAATTTGAATAATGATTCATATTCATCGGGATTGAGAAAAGTCGGGATTGATGCAAGTATTGATTTTGGTATTTGATACTCAAATTAAATAAATATAATTAATTATAATTAATATTTATTTAGTTTAATGTTAATTTCTCGAAATTGATTTAAATGAAGTTAAATTGATTTTGAAAAATGATTTTAATATGAAAATCAATTTTAAGTTAAAATGTTTGCAAGATTGTGGTTTTGCCACATGAACTATGAGTAAGAATATCCCATGCTTGCTGTCAATCTTTTGAAGAAAATTTTTGCATGCTCATTGTCTTTAAATTGGTGAGTTTAAAGGCTTAGATGATGGATGAAAATTTTCTCTTGACGATGGATGAATACAGCAAGCAAAGTCTCTCAAATAACCATGGCTCTCAAGTTCAAAAACCCATATCTTTCTCTTTCCAAATTCATCATGCTCGGGTTCCCACAAGCCCATTCTAAGGCCGAAGAATAGTGGGAAAGATCACGGTGGTCGTCCATGGCTTGATCATGTAGAGAAACTTCCAACGGTATGCTTGAATTCAGATCTTCAAAGAGGTATTTATAATTGCTCTGCCTTCGTCTATGTTTAAGCATGCTTTTAATCTTCAAAATTAATGAAAATTAGTGCCTAAGATCCTCTAACGCTTCCAAGAAGTCACAATATCATTACTACATTTCCAAGCAGATAGTAAATTTTCTGGCAGATGGTTTCTTGATATCTCCATTGACGAACCCTAGCTTATTCTTTCCTGAAATAATGATGAGCATTGCTTTACTCCAAGAAGTTGCTCTCACCAACAAGAACTCACGTGACTAATGCAGTGGTTGTAGCAGTTGAATGATGCAGCAAGTAAGGATTCATCTGAGCTTTAATGGCAAAGGAATCGAGAATCGAGTTGTCTTCATCCATGGTGAAAGAAATCGTGAAGATGATAGAAGACGAGAAAATGAATAATAGAGTCAATTGATGGAAAGGAAGGAAAGATTACAAATGCTAATTTTGGTTGATGAGAAGGGTCAAAAATATACCTATTTTACCCTTATATTTAGCTCATTATCTTGTCAAAGATGTATGTTTTAGATCAAATATATTATTCTCAAGCTCAAGTGTTAGAGTTGATGAATTAGGAAGTTGAGAGCCATGTATATCAAATTATGCATATTTGTGTTGAAAAGAACTCATTTTGGTAAGAATTTGACTTGGTTTGGTGCTTTGCAGAAAAAACAGAGGAATCTAGAATTTCCGATAAATGCGACCACATTTCTGGCAAGGCAAAAATCAATTGCGACCGCATTTTTGGACAGATGAAGGCAGTTCCAAGTCCGTCGCGGGTCGTTTTGAACGAGTGTTTTGTGCACCTAACCGGTTGTTTTGACTCCGAAACTGACTGGGCTACTTGCTAATACCATTTTCGTGACTCCTCAACCACTCCCCACACTATAAAAGGCCTCAATTCGAAGGAAAATTCAAGCAGAAATCACTGGGAAGAAGACGGTGGTGACAGGACCCTAGTAGACACCTATGAGTAGGGATGTCTGAGGTCCTTCTTAGAAGACTAAATTCTAACCCTTAGTTAGACATCAAACCCAAGTGTTTGTAGAGATTTCACCCTATTCCCACTTGTAAAAGGAGAGTAGAGTATCGTGAAAACTCTAGAAGGATTGGATAAAAGTGAAAAACCCCCAATTATAGCTACTGCATGCACTATATTTTTCCAGCACTTGTTCCTTTCTCCATAGAATATATGGAATTTCCAACGATGGAGTTGAAAGTAGCAATGGATTAAAGTTTGTTCTCTCGAACAATTTTTCCATAGAATATATGGAATTTATAAAATTGACTGAGTCTGTCCACATTACCTTTGGGAAAATCCCAGTGTAGTAGTAGGGTAATAGAAATGTTTCAAAGTTTTCCAGTTTCAGTTCTAGATATGATTCTACAAGGAGCCAAATATGTTCCATATCATTTCTCATTTTCTGTCTCTTTTTACTCTCTCTCGAACTGGTATATTATTAGCTTTCTGAACAAAAGAAAGGTTTGGGACCTTGCTTCATTTATATGCAATACAATTGAACATATGTACTTTTTTAAAAATTATTATTGTGATTACCATTTGGTGCAGTTCGATGTATTGGTTGCAGCATTGCCTCTATCTGATGGGGGTGAAGAAGAGCAGTTGAAAAGGATTGCAGAACTACATGTATAAATCTTCTCATATTCTGATGTTGATATAAGACCAGTGTTTTCAAAGCGCAAGGCACACCTCAAGGCGACAAGCCCCTTGATCGCCTCAAGGCGAGAGGCGACAAAAAGGCGACGCCCGAGTGAAGCGAGGCGCAATAAATAGAAACATAAATAAATAATATATATAGAGCATAAATTTCTATAGTAAATATAATTACATAAAGTGTCAAATTCTTATCCTCCTTACACATTAATATTGAATAGTAAAAACATATAAGGGCCAAAACATCAAACAAGAATCAATTTCTAGTAGTTGTAGTTCCAAAACACCATGAAGACAAGACTTAAGAGCGAACAAAAACTAAAAGTCTAAAAGCCAAAAGTAAAACATTAAAGGTCAAAATCATCATCCTCCTCTCCTTCTAAATAATGGATCATCTTCCTCTCCTTCTAAATAATGGATAAGTGTCCACTGTCCAGCAAGGCAGCACAACAAGAAGATAATGGCTGAAGTGGAACGGTGGAAGTGGAATATTTAAGTTAGTGCTATGCACTTAGGTGCAAAAGGTCAAAAAGTAAAAACCAAAGAGAATTGTTGAAGTTGAAGCCGTAGAAGGATGAAGAAGAAGCCAAATATGATGATGATTGAAGGAGTAATAGAAGAAGAAGCCGATGATTGAAGAAGAAACAGAAAATGCCGAAGAAGATTTTTTTTCCTTTTGCATGAGAAATGCAACTTGCCGAATAAAGAATAGGTTGAATAGGTGAGCGTCCCACTGCATGGCTTTTCGTGGGCTTTTTTTTGGGCTATTCTTAGGGTTTTCGTAGGTTTTAAGTTACGCTCAACATATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTAGCTTCAGTCAGGCGCACGCCTGAGACCAAGGCGAACTCCATGCGAGGCGAGCAAAGGTGCACTCGGGCAAGCGCCTGTTTGAAGACGCTCGCCCCAGCTACCTACGAGGCGCAGTACATGCTGGGTGCCTCGCCTCTCGCCATAGGCACTCGCCCGACGTCGCCTCAACAACACTGTATAAGACCCAAGAATAACTATATTGTTAAGTTCTCTACTCAGTACGTTCGAAACTTGTTATCCAGGTTGAGAACGATGTTGTAGGTCAAGAACTTCAAAAGCAGCTAGAAGCAGCAGGTGTTATCTCGTCTTCTTGTTAGCCTTTATATTTACAACATGCCTAATTGCAAATTATTGGTCCACCGTGACTTCAAAAGCATACTAAAAATATTATCTCCTATGGGAGATTGTTACTGTAGTTTTGGACCAGCATAAGTTCACTAAATCGTTGTCTGGATTGTGTCTTACAACGGTTCAATTAATTTTGTTTAAGAATTTAAGGCCTAAATTTTTCATGTTCTCTCCATTCTATTGAATATGCTACTGATATTTGGCTACTGCTACACAACTAACAATCTTAATGGAACTGTTTGTTGCAGAGAAAGAATTAAAACAGGTTCAGGAGCTTTTCAGCCAAGTTGCAGATAATTGCTTGAAGTTGAAGAAAGCAGATTGA ATGGCAGCATCTCGACGCTGCGACAGCTCCAGGGGCAGAATGGTCTTTTTACGCTCCGGTTTTGCTCGTTTAAGCCCCGAATCGCTTTCGAAGCTCCAGCCGAAGAATAGTGGGAAAGATCACGGTGGTCGTCCATGGCTTGATCATGTAGAGAAACTTCCAACGGTATGCTTGAATTCAGATCTTCAAAGAGAAAAAACAGAGGAATCTAGAATTTCCGATAAATGCGACCACATTTCTGGCAAGGCAAAAATCAATTGCGACCGCATTTTTGGACAGATGAAGGCAGTTCCAAGTCCGTCGCGGGTCGTTTGGGACCTTGCTTCATTTATATGCAATACAATTGAACATATGTACTTTTTTAAAAATTATTATTGTGATTACCATTTGGTGCAGTTCGATGTATTGGTTGCAGCATTGCCTCTATCTGATGGGGGTGAAGAAGAGCAGTTGAAAAGGATTGCAGAACTACATGTTGAGAACGATGTTGTAGGTCAAGAACTTCAAAAGCAGCTAGAAGCAGCAGAGAAAGAATTAAAACAGGTTCAGGAGCTTTTCAGCCAAGTTGCAGATAATTGCTTGAAGTTGAAGAAAGCAGATTGA ATGGCAGCATCTCGACGCTGCGACAGCTCCAGGGGCAGAATGGTCTTTTTACGCTCCGGTTTTGCTCGTTTAAGCCCCGAATCGCTTTCGAAGCTCCAGCCGAAGAATAGTGGGAAAGATCACGGTGGTCGTCCATGGCTTGATCATGTAGAGAAACTTCCAACGGTATGCTTGAATTCAGATCTTCAAAGAGAAAAAACAGAGGAATCTAGAATTTCCGATAAATGCGACCACATTTCTGGCAAGGCAAAAATCAATTGCGACCGCATTTTTGGACAGATGAAGGCAGTTCCAAGTCCGTCGCGGGTCGTTTGGGACCTTGCTTCATTTATATGCAATACAATTGAACATATGTACTTTTTTAAAAATTATTATTGTGATTACCATTTGGTGCAGTTCGATGTATTGGTTGCAGCATTGCCTCTATCTGATGGGGGTGAAGAAGAGCAGTTGAAAAGGATTGCAGAACTACATGTTGAGAACGATGTTGTAGGTCAAGAACTTCAAAAGCAGCTAGAAGCAGCAGAGAAAGAATTAAAACAGGTTCAGGAGCTTTTCAGCCAAGTTGCAGATAATTGCTTGAAGTTGAAGAAAGCAGATTGA MAASRRCDSSRGRMVFLRSGFARLSPESLSKLQPKNSGKDHGGRPWLDHVEKLPTVCLNSDLQREKTEESRISDKCDHISGKAKINCDRIFGQMKAVPSPSRVVWDLASFICNTIEHMYFFKNYYCDYHLVQFDVLVAALPLSDGGEEEQLKRIAELHVENDVVGQELQKQLEAAEKELKQVQELFSQVADNCLKLKKAD Homology
BLAST of Spg023072 vs. NCBI nr
Match: XP_022153730.1 (mediator of RNA polymerase II transcription subunit 21 [Momordica charantia]) HSP 1 Score: 122.5 bits (306), Expect = 4.2e-24 Identity = 65/69 (94.20%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg023072 vs. NCBI nr
Match: XP_022958635.1 (mediator of RNA polymerase II transcription subunit 21 [Cucurbita moschata] >XP_022958636.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita moschata] >XP_022996209.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita maxima] >XP_022996211.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita maxima] >KAG7035787.1 Mediator of RNA polymerase II transcription subunit 21 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 122.5 bits (306), Expect = 4.2e-24 Identity = 65/69 (94.20%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg023072 vs. NCBI nr
Match: XP_023532119.1 (mediator of RNA polymerase II transcription subunit 21 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 122.5 bits (306), Expect = 4.2e-24 Identity = 65/69 (94.20%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg023072 vs. NCBI nr
Match: KAG6605829.1 (Mediator of RNA polymerase II transcription subunit 21, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 121.7 bits (304), Expect = 7.2e-24 Identity = 64/69 (92.75%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg023072 vs. NCBI nr
Match: XP_004149640.1 (mediator of RNA polymerase II transcription subunit 21 [Cucumis sativus] >KGN54019.1 hypothetical protein Csa_021664 [Cucumis sativus]) HSP 1 Score: 118.6 bits (296), Expect = 6.1e-23 Identity = 63/69 (91.30%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of Spg023072 vs. ExPASy Swiss-Prot
Match: C0LU16 (Mediator of RNA polymerase II transcription subunit 21 OS=Arabidopsis thaliana OX=3702 GN=MED21 PE=1 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 6.3e-23 Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 0
BLAST of Spg023072 vs. ExPASy TrEMBL
Match: A0A6J1K432 (Mediator of RNA polymerase II transcription subunit 21 OS=Cucurbita maxima OX=3661 GN=LOC111491504 PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.0e-24 Identity = 65/69 (94.20%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg023072 vs. ExPASy TrEMBL
Match: A0A6J1H2M0 (Mediator of RNA polymerase II transcription subunit 21 OS=Cucurbita moschata OX=3662 GN=LOC111459801 PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.0e-24 Identity = 65/69 (94.20%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg023072 vs. ExPASy TrEMBL
Match: A0A6J1DHM9 (Mediator of RNA polymerase II transcription subunit 21 OS=Momordica charantia OX=3673 GN=LOC111021179 PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.0e-24 Identity = 65/69 (94.20%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg023072 vs. ExPASy TrEMBL
Match: A0A0A0KZ00 (Mediator of RNA polymerase II transcription subunit 21 OS=Cucumis sativus OX=3659 GN=Csa_4G268030 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 2.9e-23 Identity = 63/69 (91.30%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of Spg023072 vs. ExPASy TrEMBL
Match: A0A5A7TEZ9 (Mediator of RNA polymerase II transcription subunit 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00920 PE=3 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 8.5e-23 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of Spg023072 vs. TAIR 10
Match: AT4G04780.1 (mediator 21 ) HSP 1 Score: 109.0 bits (271), Expect = 4.5e-24 Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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