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Spg023011 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTACCTCCCCTCAAAAGGCTCAGAATCCTTCAAGAACAGGAATGTAAGAGGCAGCAAGAGGATCAGTCGCTTGATTCTTGTTCCCTCCCAGCGAAGAAGCGGAAGGAGTCTCGTGATTCGTCATTCCTCGTCCCTGACGCCACATTGCCCCCACAGAAACGCCATTTTCGCTTCTCCTTACTGCTTGCCGACAAAGAAAAGGGTCTGGGCGCTTCACCCAGATTTCGCCCCTGAATCTATGGATCTCAATGTTGAATACAAGCCACCTCCGGATGAAGAATCAATTTCGAAAACAGAACCAGAGACAGAGAAAAAGGAGAAGGAAGAGGAAAAGGAAAAGGAAATTTCTGATGTTGAGATTGAGATTCAAGCGATTGAATCTACCCAAGAAGAGGATGAAGAAGAAGACGATGGGATCCTATGTGCGATTTTTCAAAGCACGGATGGGGAACCTTCAGATCCAATCGTGTTCTGCGATGGATGCGATTTGATGGTACACGCTTCGTGTTATGGTAATCCTCTGGTGAAGAACTTACCAGAAAGCGATTGGTTCTGTATCCAATGCTTAGCTTCTTCGTCTTCCAAGCTGGAGAAGAAGGTTTCTGAAACTCCATTTTCATGCTGCCTCTGTCCTCTGAAAGGATGGGCTATGAAGCCGACGAAAGAGAAGAAAAGAGAAAGGAGAAAAAAAAAACACAGTCGTCGGCCGACGGCGGCGAGCGGTGGTCGGTCGCCAGTCACCGGTCGCTGGCCGCCAGAGACTTGA ATGGCTTACCTCCCCTCAAAAGGCTCAGAATCCTTCAAGAACAGGAATGTAAGAGGCAGCAAGAGGATCAGTCGCTTGATTCTTGTTCCCTCCCAGCGAAGAAGCGGAAGGAGTCTCGTGATTCGTCATTCCTCGTCCCTGACGCCACATTGCCCCCACAGAAACGCCATTTTCGCTTCTCCTTACTGCTTGCCGACAAAGAAAAGGGTCTGGGCGCTTCACCCAGATTTCGCCCCTGAATCTATGGATCTCAATGTTGAATACAAGCCACCTCCGGATGAAGAATCAATTTCGAAAACAGAACCAGAGACAGAGAAAAAGGAGAAGGAAGAGGAAAAGGAAAAGGAAATTTCTGATGTTGAGATTGAGATTCAAGCGATTGAATCTACCCAAGAAGAGGATGAAGAAGAAGACGATGGGATCCTATGTGCGATTTTTCAAAGCACGGATGGGGAACCTTCAGATCCAATCGTGTTCTGCGATGGATGCGATTTGATGGTACACGCTTCGTGTTATGGTAATCCTCTGGTGAAGAACTTACCAGAAAGCGATTGGTTCTGTATCCAATGCTTAGCTTCTTCGTCTTCCAAGCTGGAGAAGAAGGTTTCTGAAACTCCATTTTCATGCTGCCTCTGTCCTCTGAAAGGATGGGCTATGAAGCCGACGAAAGAGAAGAAAAGAGAAAGGAGAAAAAAAAAACACAGTCGTCGGCCGACGGCGGCGAGCGGTGGTCGGTCGCCAGTCACCGGTCGCTGGCCGCCAGAGACTTGA ATGGCTTACCTCCCCTCAAAAGGCTCAGAATCCTTCAAGAACAGGAATGTAAGAGGCAGCAAGAGGATCAGTCGCTTGATTCTTGTTCCCTCCCAGCGAAGAAGCGGAAGGAGTCTCGTGATTCGTCATTCCTCGTCCCTGACGCCACATTGCCCCCACAGAAACGCCATTTTCGCTTCTCCTTACTGCTTGCCGACAAAGAAAAGGGTCTGGGCGCTTCACCCAGATTTCGCCCCTGAATCTATGGATCTCAATGTTGAATACAAGCCACCTCCGGATGAAGAATCAATTTCGAAAACAGAACCAGAGACAGAGAAAAAGGAGAAGGAAGAGGAAAAGGAAAAGGAAATTTCTGATGTTGAGATTGAGATTCAAGCGATTGAATCTACCCAAGAAGAGGATGAAGAAGAAGACGATGGGATCCTATGTGCGATTTTTCAAAGCACGGATGGGGAACCTTCAGATCCAATCGTGTTCTGCGATGGATGCGATTTGATGGTACACGCTTCGTGTTATGGTAATCCTCTGGTGAAGAACTTACCAGAAAGCGATTGGTTCTGTATCCAATGCTTAGCTTCTTCGTCTTCCAAGCTGGAGAAGAAGGTTTCTGAAACTCCATTTTCATGCTGCCTCTGTCCTCTGAAAGGATGGGCTATGAAGCCGACGAAAGAGAAGAAAAGAGAAAGGAGAAAAAAAAAACACAGTCGTCGGCCGACGGCGGCGAGCGGTGGTCGGTCGCCAGTCACCGGTCGCTGGCCGCCAGAGACTTGA MAYLPSKGSESFKNRNVRGSKRISRLILVPSQRRSGRSLVIRHSSSLTPHCPHRNAIFASPYCLPTKKRVWALHPDFAPESMDLNVEYKPPPDEESISKTEPETEKKEKEEEKEKEISDVEIEIQAIESTQEEDEEEDDGILCAIFQSTDGEPSDPIVFCDGCDLMVHASCYGNPLVKNLPESDWFCIQCLASSSSKLEKKVSETPFSCCLCPLKGWAMKPTKEKKRERRKKKHSRRPTAASGGRSPVTGRWPPET Homology
BLAST of Spg023011 vs. NCBI nr
Match: XP_038897327.1 (protein Jade-1 [Benincasa hispida]) HSP 1 Score: 283.5 bits (724), Expect = 1.8e-72 Identity = 142/166 (85.54%), Postives = 152/166 (91.57%), Query Frame = 0
BLAST of Spg023011 vs. NCBI nr
Match: XP_023523315.1 (peregrin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 276.6 bits (706), Expect = 2.2e-70 Identity = 143/188 (76.06%), Postives = 154/188 (81.91%), Query Frame = 0
BLAST of Spg023011 vs. NCBI nr
Match: XP_004146012.1 (protein Jade-1 [Cucumis sativus] >KGN55024.1 hypothetical protein Csa_012875 [Cucumis sativus]) HSP 1 Score: 273.1 bits (697), Expect = 2.5e-69 Identity = 140/167 (83.83%), Postives = 152/167 (91.02%), Query Frame = 0
BLAST of Spg023011 vs. NCBI nr
Match: XP_022941523.1 (bromodomain-containing protein 1-like [Cucurbita moschata] >KAG6607948.1 Peregrin, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 270.4 bits (690), Expect = 1.6e-68 Identity = 143/190 (75.26%), Postives = 156/190 (82.11%), Query Frame = 0
BLAST of Spg023011 vs. NCBI nr
Match: XP_022982183.1 (peregrin-like [Cucurbita maxima]) HSP 1 Score: 267.3 bits (682), Expect = 1.3e-67 Identity = 139/186 (74.73%), Postives = 153/186 (82.26%), Query Frame = 0
BLAST of Spg023011 vs. ExPASy Swiss-Prot
Match: Q803A0 (Protein Jade-1 OS=Danio rerio OX=7955 GN=jade1 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.1e-11 Identity = 37/98 (37.76%), Postives = 52/98 (53.06%), Query Frame = 0
BLAST of Spg023011 vs. ExPASy Swiss-Prot
Match: Q6GQJ2 (Protein Jade-1 OS=Xenopus laevis OX=8355 GN=jade1 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.9e-08 Identity = 46/140 (32.86%), Postives = 70/140 (50.00%), Query Frame = 0
BLAST of Spg023011 vs. ExPASy Swiss-Prot
Match: Q6IE81 (Protein Jade-1 OS=Homo sapiens OX=9606 GN=JADE1 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.3e-08 Identity = 45/139 (32.37%), Postives = 70/139 (50.36%), Query Frame = 0
BLAST of Spg023011 vs. ExPASy Swiss-Prot
Match: Q5E9T7 (Protein Jade-1 OS=Bos taurus OX=9913 GN=JADE1 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 7.3e-08 Identity = 45/139 (32.37%), Postives = 70/139 (50.36%), Query Frame = 0
BLAST of Spg023011 vs. ExPASy Swiss-Prot
Match: B2KF05 (Bromodomain and PHD finger-containing protein 3 OS=Mus musculus OX=10090 GN=Brpf3 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 9.6e-08 Identity = 57/206 (27.67%), Postives = 83/206 (40.29%), Query Frame = 0
BLAST of Spg023011 vs. ExPASy TrEMBL
Match: A0A0A0L1Z0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G622830 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 1.2e-69 Identity = 140/167 (83.83%), Postives = 152/167 (91.02%), Query Frame = 0
BLAST of Spg023011 vs. ExPASy TrEMBL
Match: A0A6J1FSC2 (bromodomain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446801 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 7.7e-69 Identity = 143/190 (75.26%), Postives = 156/190 (82.11%), Query Frame = 0
BLAST of Spg023011 vs. ExPASy TrEMBL
Match: A0A6J1J472 (peregrin-like OS=Cucurbita maxima OX=3661 GN=LOC111481086 PE=4 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 6.5e-68 Identity = 139/186 (74.73%), Postives = 153/186 (82.26%), Query Frame = 0
BLAST of Spg023011 vs. ExPASy TrEMBL
Match: A0A5D3DWL7 (Protein Jade-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00260 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 3.2e-67 Identity = 136/169 (80.47%), Postives = 150/169 (88.76%), Query Frame = 0
BLAST of Spg023011 vs. ExPASy TrEMBL
Match: A0A1S3CK15 (protein Jade-1 OS=Cucumis melo OX=3656 GN=LOC103501849 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 3.2e-67 Identity = 136/169 (80.47%), Postives = 150/169 (88.76%), Query Frame = 0
BLAST of Spg023011 vs. TAIR 10
Match: AT3G14740.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 158.3 bits (399), Expect = 8.2e-39 Identity = 95/173 (54.91%), Postives = 117/173 (67.63%), Query Frame = 0
BLAST of Spg023011 vs. TAIR 10
Match: AT3G14740.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 158.3 bits (399), Expect = 8.2e-39 Identity = 95/173 (54.91%), Postives = 117/173 (67.63%), Query Frame = 0
BLAST of Spg023011 vs. TAIR 10
Match: AT5G53430.1 (SET domain group 29 ) HSP 1 Score: 55.1 bits (131), Expect = 9.8e-08 Identity = 26/80 (32.50%), Postives = 39/80 (48.75%), Query Frame = 0
BLAST of Spg023011 vs. TAIR 10
Match: AT4G27910.1 (SET domain protein 16 ) HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06 Identity = 25/80 (31.25%), Postives = 38/80 (47.50%), Query Frame = 0
BLAST of Spg023011 vs. TAIR 10
Match: AT2G31650.1 (homologue of trithorax ) HSP 1 Score: 50.1 bits (118), Expect = 3.2e-06 Identity = 25/65 (38.46%), Postives = 33/65 (50.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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