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Spg022979 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCGGTGTGTACACGACGTGGTACGAATGTGCCCACCAAGTACATGGTTTTAGTGGTGCCGTTTACCAGTCGTATGAGACGTGGGAGGACGCAGAAGCAACTTATATCGCTTACACCATGGAAGTGGACAGTCATTCCAGTCGTCATGGAGACCTTCACCTTCACAATAGCTATCCTAACCGTGAACTAGATAGAAATGTAGTCAATAGGACCGTTAGCACGTGTAGTGGAGCATACCATGTTCTCCTCTTCATAGTAGGGTTTTTTCTTGGTGTAGCCGTCGTCATATTAGGTAGTCTGATGTAGTATGGACATTTATTTTCAGGATTGTCCGTAGAAGCTATCGAATGGATGCCCAAGATAATGAAATTCAAGAATTGATCGCAATTCTTACTATCATTTGTGCGACACAGTATCAGTTCATAGCGGCAGTTCTCGGGATCTTGCACTCAGGTTATTCCTGGGAATTTCGATCCCCGACTCATGTACGACACCGAATCAGGCAACTGAACTTCTTCCGTATTATTCACGAGGATGATTTGGCTTGTCGTGAAAATACACGCATGGATCGACGAACATTCACGATCCTGTGTACCCTTTTACGGACCACTGGTAGACTACAAGCCACTAACTACGTCGATGTGGAGGAGATGGTTGCAATGTTCCTCCACATCGTTGCACACGACGTTAAGAATCGTGTGATCCGTCGCCAATTTGTGCGTTCGGGAGAGACCGTATCCCGGCACTTCAATGCCGTACTGGATGCAGTACTTCGATTGCTCCCAGTCCTATTGAAAGCATCTAAACCAGTTACCAATGCGTGTACGGACGATAGGTGGAAGTGGTTTGAGGTAATGAAATGTTGTTATCTTGTCTTCCACTGGAGGACAACCTAACTTCAGGAAAATACTCGACCACTAAAACTTTATCACTCGTCTGTTCGCAGAACTGCTTAGGTGCTCTTGATGGTACACACATTAAGGTCAACGTCAGTGCGGTAGATCGCCCCAGATATCGGCCGAGGAAGGGGGAGGTTGCGACTAATGTACTGGCCGTTTGTTCCCAGAATGGCGAGTTCATTTTCGTGTTCCCAGGGTGGGAAGGATCTGCATCGGACTCAAGGGTACTTCGTGATGCAGTCTCACGTCCTTCGGGACTAAAGGTTCCCAGGGGCTACTACTACCTCTGTGATGCCGGATATCCTAACGCGGATGGATTCCTAGCACCATATCGTAGCACACGATACCACCTAACCGAGTGGCGAGGTGGAAACCCACCCACGACCCCGAAGGAGCTTTTCAACATGAGACATTCGTCGACACGGAATGTCATAGAACGAGCCTTCGGACTGTTGAAGGGTCGATGGGCAATATTGAGGGGCAAATCTTACTACCCTGTTGATGTGCAAGTGAAAACCATCACCGCTTGCTGCTACCTTCATAACCTAATAACACGGGAGATGGGACAAGATCCTTCGATGGAGGCCGCTCATACGGGGGAACAAGATTCTAACGGTATGGGAACAGAGAACATCACATTCGTTGAATCCACCACTGCATGGAGTTCCTGGAGGGATGAATTGGCGAATCAAATGTTCGCTGAATGGAACAACAACTGAGATGATCTCCTCAACTTCTTTTGTTAAATTTTTTTTGTAAAACGAGACTGTAGAAAGTGCCACTCGTTTTTGTATACCGAACATGTCGTAGGAACAGTATGATGTAAATAGATCGTAATGGGTGTACGAAAACATGTATATTTTGGAATGTAAATGGTTTGAATTTTAACTGTTTATTGGAACAAATGTTCATTAAATTTTACTAGTATGGAACTTTGTAAATGTTCTTTGTTCTTTATGTCCTCCACCTATGGTTCTGATTATTTGCTAAACATGCAGATGGCCGCGTCTGCCTCAACTTCGAAGAAAGAGAAACACATCTGGACGCCGGATGAAGACGAAGTACTTGTGCAGTGCCTACTGCACCTAGTCCAAGTGGGGGGATGGCGTGCAGACAATGGGACGTTTCGGCCTGGTTACCAGAATCAGATTGGAAGGATGATGAAAGAAAGATTACCAGGATGCAACATAGTCGTCAGCCCGAACATTGAATCCAGAGTGAAGCTGCTAAAAAAACAGTACATGGCGATAGCCGAGATGATGGGACCGGCCTGCAGTGGATTTGGTTGGAATGATGAGAGAAAGTGCATAGAGGCGGAGAAGGAGATATTCGATTTGTGGGTCGAGGTAAGCGAACAACGATCATAATTATGATATACATCTGATACACATATCTGCGAAGAATGTATGCTAACAAAACATTTATCTTCCACCTGTAGGGACATCCACAGGCCAAGGGCCTCCGTAATCGGCCATTCCCATGGTTCAATGAGTTGGCACTCGTTTTCGGGAAGGACAGCGCTAGAGGAGTGAGAGTCGAACCCCAATTGAGATAACACCTGAACCAGAGCCGGTAGCCAATCTGGATGAAGACATGAGCGTGGATTTTGAGGATTGCTACGTCCCAAGTCCCCCAGTTATTGATCCCACCCTTGGAGAAGAATTCTGTGGGACACCGACTGGTAGGACGGCTGGTGCAGGACCTTCTAGGGCAGTACATAAGAGACGACTATCCATTGGGAACGTGGCGGAGGTACTGGAGAATGGATTCCAGATGACCGCACAACAGATCGAGAAGATTGCGCTCTGGCCGACCAAGAGGGACGAGCTCGAGAGGAGTCGGCGAAAGGAGTTATATGCGGAGCTACAATCCATTCCTGGGGTGTCTATGGAGGACGGCTTGGTGGTCGCACGGGCACTACTATCAGATGAGAGGATGTTGACTCACTTTATGGACTTCCCTCCAGAATGGAAGTTCGACTACTGTATGGAGATCCTCGGTAGGGCACCGAGACAGCCCCCGCAGCCATGA ATGCCCGGTGTGTACACGACGTGGTACGAATGTGCCCACCAAGTACATGGTTTTAGTGGTGCCGTTTACCAGTCGTATGAGACGTGGGAGGACGCAGAAGCAACTTATATCGCTTACACCATGGAAGTGGACAGTCATTCCAGTCGTCATGGAGACCTTCACCTTCACAATAGCTATCCTAACCGTGAACTAGATAGAAATGTAGTCAATAGGACCGTTAGCACGTGTAGTGGAGCATACCATGTTCTCCTCTTCATAGTAGGGTTTTTTCTTGGTGTAGCCGTCGTCATATTAGTATCAGTTCATAGCGGCAGTTCTCGGGATCTTGCACTCAGTATGGAACTTTGTAAATGTTCTTTGTTCTTTATGTCCTCCACCTATGGTTCTGATTATTTGCTAAACATGCAGATGGCCGCGTCTGCCTCAACTTCGAAGAAAGAGAAACACATCTGGACGCCGGATGAAGACGAAGTACTTGTGCAGTGCCTACTGCACCTAGTCCAAGTGGGGGGATGGCGTGCAGACAATGGGACGTTTCGGCCTGGTTACCAGAATCAGATTGGAAGGATGATGAAAGAAAGATTACCAGGATGCAACATAGTCGTCAGCCCGAACATTGAATCCAGAGTGAAGCTGCTAAAAAAACAGTACATGGCGATAGCCGAGATGATGGGACCGGCCTGCAGTGGATTTGGTTGGAATGATGAGAGAAAGTGCATAGAGGCGGAGAAGGAGATATTCGATTTGTGGGTCGAGAGGAGTGAGAGTCGAACCCCAATTGAGATAACACCTGAACCAGAGCCGGTAGCCAATCTGGATGAAGACATGAGCGTGGATTTTGAGGATTGCTACGTCCCAAGTCCCCCAGTTATTGATCCCACCCTTGGAGAAGAATTCTGTGGGACACCGACTGGTAGGACGGCTGGTGCAGGACCTTCTAGGGCAGTACATAAGAGACGACTATCCATTGGGAACGTGGCGGAGGTACTGGAGAATGGATTCCAGATGACCGCACAACAGATCGAGAAGATTGCGCTCTGGCCGACCAAGAGGGACGAGCTCGAGAGGAGTCGGCGAAAGGAGTTATATGCGGAGCTACAATCCATTCCTGGGGTGTCTATGGAGGACGGCTTGGTGGTCGCACGGGCACTACTATCAGATGAGAGGATGTTGACTCACTTTATGGACTTCCCTCCAGAATGGAAGTTCGACTACTGTATGGAGATCCTCGGTAGGGCACCGAGACAGCCCCCGCAGCCATGA ATGCCCGGTGTGTACACGACGTGGTACGAATGTGCCCACCAAGTACATGGTTTTAGTGGTGCCGTTTACCAGTCGTATGAGACGTGGGAGGACGCAGAAGCAACTTATATCGCTTACACCATGGAAGTGGACAGTCATTCCAGTCGTCATGGAGACCTTCACCTTCACAATAGCTATCCTAACCGTGAACTAGATAGAAATGTAGTCAATAGGACCGTTAGCACGTGTAGTGGAGCATACCATGTTCTCCTCTTCATAGTAGGGTTTTTTCTTGGTGTAGCCGTCGTCATATTAGTATCAGTTCATAGCGGCAGTTCTCGGGATCTTGCACTCAGTATGGAACTTTGTAAATGTTCTTTGTTCTTTATGTCCTCCACCTATGGTTCTGATTATTTGCTAAACATGCAGATGGCCGCGTCTGCCTCAACTTCGAAGAAAGAGAAACACATCTGGACGCCGGATGAAGACGAAGTACTTGTGCAGTGCCTACTGCACCTAGTCCAAGTGGGGGGATGGCGTGCAGACAATGGGACGTTTCGGCCTGGTTACCAGAATCAGATTGGAAGGATGATGAAAGAAAGATTACCAGGATGCAACATAGTCGTCAGCCCGAACATTGAATCCAGAGTGAAGCTGCTAAAAAAACAGTACATGGCGATAGCCGAGATGATGGGACCGGCCTGCAGTGGATTTGGTTGGAATGATGAGAGAAAGTGCATAGAGGCGGAGAAGGAGATATTCGATTTGTGGGTCGAGAGGAGTGAGAGTCGAACCCCAATTGAGATAACACCTGAACCAGAGCCGGTAGCCAATCTGGATGAAGACATGAGCGTGGATTTTGAGGATTGCTACGTCCCAAGTCCCCCAGTTATTGATCCCACCCTTGGAGAAGAATTCTGTGGGACACCGACTGGTAGGACGGCTGGTGCAGGACCTTCTAGGGCAGTACATAAGAGACGACTATCCATTGGGAACGTGGCGGAGGTACTGGAGAATGGATTCCAGATGACCGCACAACAGATCGAGAAGATTGCGCTCTGGCCGACCAAGAGGGACGAGCTCGAGAGGAGTCGGCGAAAGGAGTTATATGCGGAGCTACAATCCATTCCTGGGGTGTCTATGGAGGACGGCTTGGTGGTCGCACGGGCACTACTATCAGATGAGAGGATGTTGACTCACTTTATGGACTTCCCTCCAGAATGGAAGTTCGACTACTGTATGGAGATCCTCGGTAGGGCACCGAGACAGCCCCCGCAGCCATGA MPGVYTTWYECAHQVHGFSGAVYQSYETWEDAEATYIAYTMEVDSHSSRHGDLHLHNSYPNRELDRNVVNRTVSTCSGAYHVLLFIVGFFLGVAVVILVSVHSGSSRDLALSMELCKCSLFFMSSTYGSDYLLNMQMAASASTSKKEKHIWTPDEDEVLVQCLLHLVQVGGWRADNGTFRPGYQNQIGRMMKERLPGCNIVVSPNIESRVKLLKKQYMAIAEMMGPACSGFGWNDERKCIEAEKEIFDLWVERSESRTPIEITPEPEPVANLDEDMSVDFEDCYVPSPPVIDPTLGEEFCGTPTGRTAGAGPSRAVHKRRLSIGNVAEVLENGFQMTAQQIEKIALWPTKRDELERSRRKELYAELQSIPGVSMEDGLVVARALLSDERMLTHFMDFPPEWKFDYCMEILGRAPRQPPQP Homology
BLAST of Spg022979 vs. NCBI nr
Match: KAA0050106.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 276.2 bits (705), Expect = 4.8e-70 Identity = 137/275 (49.82%), Postives = 186/275 (67.64%), Query Frame = 0
BLAST of Spg022979 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]) HSP 1 Score: 204.1 bits (518), Expect = 2.3e-48 Identity = 117/298 (39.26%), Postives = 160/298 (53.69%), Query Frame = 0
BLAST of Spg022979 vs. NCBI nr
Match: KAA0065306.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 202.2 bits (513), Expect = 8.7e-48 Identity = 112/275 (40.73%), Postives = 149/275 (54.18%), Query Frame = 0
BLAST of Spg022979 vs. NCBI nr
Match: TYJ96933.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 186.4 bits (472), Expect = 5.0e-43 Identity = 101/236 (42.80%), Postives = 136/236 (57.63%), Query Frame = 0
BLAST of Spg022979 vs. NCBI nr
Match: XP_008455678.1 (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]) HSP 1 Score: 186.4 bits (472), Expect = 5.0e-43 Identity = 101/236 (42.80%), Postives = 136/236 (57.63%), Query Frame = 0
BLAST of Spg022979 vs. ExPASy Swiss-Prot
Match: Q07762 (Ribonuclease H OS=Crithidia fasciculata OX=5656 GN=RNH1 PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 4.7e-04 Identity = 22/50 (44.00%), Postives = 30/50 (60.00%), Query Frame = 0
BLAST of Spg022979 vs. ExPASy TrEMBL
Match: A0A5A7U7F7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001200 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 2.3e-70 Identity = 137/275 (49.82%), Postives = 186/275 (67.64%), Query Frame = 0
BLAST of Spg022979 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.1e-48 Identity = 117/298 (39.26%), Postives = 160/298 (53.69%), Query Frame = 0
BLAST of Spg022979 vs. ExPASy TrEMBL
Match: A0A5A7VG45 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00220 PE=3 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 4.2e-48 Identity = 112/275 (40.73%), Postives = 149/275 (54.18%), Query Frame = 0
BLAST of Spg022979 vs. ExPASy TrEMBL
Match: A0A5D3BC95 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00380 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 2.4e-43 Identity = 101/236 (42.80%), Postives = 136/236 (57.63%), Query Frame = 0
BLAST of Spg022979 vs. ExPASy TrEMBL
Match: A0A1S3C252 (uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103495792 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 2.4e-43 Identity = 101/236 (42.80%), Postives = 136/236 (57.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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