Spg022417 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCCTCGATCTTCGCGCTCGCGACGGCGATACTCGCGATTCACGGCATTGCGGCTATGGCCCAGGCTCCGGCGCCAGGGCCGGCGGCGGCGGCGGCGGACTGCTTCACGACGCTTCTGAACATGTCCGATTGCCTGTCGTACGTGTCGACGGGGAGCAACGACACGAAGCCGGACAAGCATTGCTGCCCGGAGCTGGCGGGGCTAGTGGAGAGTAGCCCTAGCTGCCTGTGCCAGCTTCTTAGCGATCCTGATAAAGTTGGGTTAACCATTGATGTTGACAGAGCTATGAAGCTTCCTTCCGCCTGCAATGTCTCCACTCCTCCGGTCACTCTCTGTTCTCGTAAGCTTTCTTTTCCTCTTCCCTTCTTCTTCTTCGGATTAAAATGCATTTTTCACAATTTTTTTTTTTTTTTTTTCCATTTTTCCATCATGATTCAAACATATATTCTATAATTTTTTTAGAATAAACATCGAACTATTATTAAAATCTGGAAATATCCTAACCTGTGGGACAGAATCCCCCACTAGAGTGATATACACTACCTACATCTTCTGTATTAGCAGATAAAAGCCAATTGGGAAAGGAATTTACCCAAATACTAGAAGTATCGTCCTCGTAAGCTTTACGGGCCAAAATATGGGTCATTTGGTTATGGGCCCTAGGAACATGAGAGATTGACTCTACACCTTTCAAAGATAGAAGGTTTTGAGCTTCTTTAATGAAAAAACTCAGTTCAATGTCGTCTTCCTCTTCTCTTTTGATCAGTCGAACAACTTGAATGGCATCGCACTCCAAACGCAACGGGGCGTTAAACTCTGGCGGGATCGATATTCTATAAAATTGATGTGTTCATAACTTCTAATTGCCAACATGACATTATTCATATAATATAAAAATCGTGTGAAGAGGGTGATTTGAACTTCTAACCTTAGGATCAAGAGTATAAGCTTTGAGCTATGGCGGATCCAACTAGGTTGCAGTGATTTTTTTTTTCTTTTTTGAGTTCATGTAGTAGTAAATTGTTGAAATAATAAGTTTGCTCACCAATTCGTTTATGAAAAATAATTTTAATTTTTGCGGCATGTTTAAAATTTTATTATCTTCTCTTTTTAATTTTAAAGTAAGAACTTAAGTGTAAGAATGAACTAAAAGAAACTAAAGTGTAAGAACAAAACCGACCATAAAAGAAAAGGGAGAAAAAGCATTTTACCCTGACGTCATAAAGTAAAGGGAGATAATTATGAATATCGAACAATTAATTTGGGCTTTTTCTTTAGAATTTAACTAAATTGAATTTTTAAAACTACAGGGTGGGTTATCCAGAAATTGACTAACTATTTTAAAAACTCAGGTTATGTAGACCATGTTTTCATCAATTGAATTTTAGTTTTAAAAAAATGTGCATTATATTTTTATTTTATTATTATTATTATTTATTTATTTATTTTGAATTCAACAACATTTGAAGGGAGGTGTTTAAAAAAAAAAAATGGAATTATTCACCTATTGATCAAAGATATATGTCAATTACCGCTAAGCTAAGTCAATACAAAATGTGATTTAGAATTGTATTTAACTCATCAAAATACTTTTCAAATGAAAATTGTTAGTGTTTGATGATTGACAACTATGCTTAGATTGAGTGTTGCTATAATCTACACATTTATCAACCATTTTTTTTTAAAAAAAAGATTTATAAACCATTTTATCCCAAACATGTAATTGGCAAGTACAAGGCAAAGAAGTGCATTACTAAATTTATATTACATTCAAATTCAAGTTTAAGTCCCATTCAATAATAATTTTGGATTTGGTTGTTTTAAAAAATATATATATATCTTTTTTTTTCATACTAATGATCTTCGCAACAAAAATAAAGGAACATATTGCTTTTGCCATCAACATGCTATTTTCCCCCCATGAAAGATTCAAGTAGATTTGAACCTGGGATCAGTAGTCTTAAAAGCAACCAAATTTCACAAGCATCATTTGTAAATATCATCATAAGAGAAGGCTTACAAGCTCAAATCTGTTTTTTCTGAATGCAGTTTTGGGATTTCCAGTGAAATCAGCAAACAGTCCAGCACCAGCACCAGGTAATAAACCTTCCCCTGTTTGTTTCACCTTCATTTTCTTTATACACTTCTTTGTTTATGGAAATAATGACCGCTAAACTCAAATTTCATTGTTAAATGAAAATCGTACCTAGGTGTTCAACCACCGGATGCAGGAGGCTCCACCACCACCGGCACCCCGGGAAACAGCGGGAATAGAGCTTCGAGCAACGACCGCCTTCATCTTGCATTTCCACTTGGCTTAGCCTTTGCATTTCTTCCAACACTTCTCTGA ATGGCGCCCTCGATCTTCGCGCTCGCGACGGCGATACTCGCGATTCACGGCATTGCGGCTATGGCCCAGGCTCCGGCGCCAGGGCCGGCGGCGGCGGCGGCGGACTGCTTCACGACGCTTCTGAACATGTCCGATTGCCTGTCGTACGTGTCGACGGGGAGCAACGACACGAAGCCGGACAAGCATTGCTGCCCGGAGCTGGCGGGGCTAGTGGAGAGTAGCCCTAGCTGCCTGTGCCAGCTTCTTAGCGATCCTGATAAAGTTGGGTTAACCATTGATGTTGACAGAGCTATGAAGCTTCCTTCCGCCTGCAATGTCTCCACTCCTCCGGTCACTCTCTGTTCTCTTTTGGGATTTCCAGTGAAATCAGCAAACAGTCCAGCACCAGCACCAGGTGTTCAACCACCGGATGCAGGAGGCTCCACCACCACCGGCACCCCGGGAAACAGCGGGAATAGAGCTTCGAGCAACGACCGCCTTCATCTTGCATTTCCACTTGGCTTAGCCTTTGCATTTCTTCCAACACTTCTCTGA ATGGCGCCCTCGATCTTCGCGCTCGCGACGGCGATACTCGCGATTCACGGCATTGCGGCTATGGCCCAGGCTCCGGCGCCAGGGCCGGCGGCGGCGGCGGCGGACTGCTTCACGACGCTTCTGAACATGTCCGATTGCCTGTCGTACGTGTCGACGGGGAGCAACGACACGAAGCCGGACAAGCATTGCTGCCCGGAGCTGGCGGGGCTAGTGGAGAGTAGCCCTAGCTGCCTGTGCCAGCTTCTTAGCGATCCTGATAAAGTTGGGTTAACCATTGATGTTGACAGAGCTATGAAGCTTCCTTCCGCCTGCAATGTCTCCACTCCTCCGGTCACTCTCTGTTCTCTTTTGGGATTTCCAGTGAAATCAGCAAACAGTCCAGCACCAGCACCAGGTGTTCAACCACCGGATGCAGGAGGCTCCACCACCACCGGCACCCCGGGAAACAGCGGGAATAGAGCTTCGAGCAACGACCGCCTTCATCTTGCATTTCCACTTGGCTTAGCCTTTGCATTTCTTCCAACACTTCTCTGA MAPSIFALATAILAIHGIAAMAQAPAPGPAAAAADCFTTLLNMSDCLSYVSTGSNDTKPDKHCCPELAGLVESSPSCLCQLLSDPDKVGLTIDVDRAMKLPSACNVSTPPVTLCSLLGFPVKSANSPAPAPGVQPPDAGGSTTTGTPGNSGNRASSNDRLHLAFPLGLAFAFLPTLL Homology
BLAST of Spg022417 vs. NCBI nr
Match: XP_038879591.1 (non-specific lipid transfer protein GPI-anchored 2 [Benincasa hispida]) HSP 1 Score: 280.4 bits (716), Expect = 1.1e-71 Identity = 149/177 (84.18%), Postives = 158/177 (89.27%), Query Frame = 0
BLAST of Spg022417 vs. NCBI nr
Match: XP_022988217.1 (non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita maxima]) HSP 1 Score: 271.9 bits (694), Expect = 3.8e-69 Identity = 147/181 (81.22%), Postives = 154/181 (85.08%), Query Frame = 0
BLAST of Spg022417 vs. NCBI nr
Match: XP_023516231.1 (non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 270.0 bits (689), Expect = 1.4e-68 Identity = 147/181 (81.22%), Postives = 154/181 (85.08%), Query Frame = 0
BLAST of Spg022417 vs. NCBI nr
Match: XP_022960576.1 (non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita moschata]) HSP 1 Score: 269.2 bits (687), Expect = 2.5e-68 Identity = 147/181 (81.22%), Postives = 154/181 (85.08%), Query Frame = 0
BLAST of Spg022417 vs. NCBI nr
Match: KAG6590254.1 (Non-specific lipid transfer protein GPI-anchored 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 268.1 bits (684), Expect = 5.5e-68 Identity = 146/181 (80.66%), Postives = 154/181 (85.08%), Query Frame = 0
BLAST of Spg022417 vs. ExPASy Swiss-Prot
Match: Q9LZH5 (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana OX=3702 GN=LTPG2 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 7.3e-23 Identity = 78/180 (43.33%), Postives = 97/180 (53.89%), Query Frame = 0
BLAST of Spg022417 vs. ExPASy Swiss-Prot
Match: Q9ZVC7 (Non-specific lipid transfer protein GPI-anchored 12 OS=Arabidopsis thaliana OX=3702 GN=LTPG12 PE=2 SV=2) HSP 1 Score: 95.9 bits (237), Expect = 4.9e-19 Identity = 58/148 (39.19%), Postives = 81/148 (54.73%), Query Frame = 0
BLAST of Spg022417 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.2e-18 Identity = 61/167 (36.53%), Postives = 89/167 (53.29%), Query Frame = 0
BLAST of Spg022417 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 8.6e-16 Identity = 51/138 (36.96%), Postives = 81/138 (58.70%), Query Frame = 0
BLAST of Spg022417 vs. ExPASy Swiss-Prot
Match: Q7EB72 (Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3702 GN=LTPG15 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.3e-15 Identity = 61/176 (34.66%), Postives = 94/176 (53.41%), Query Frame = 0
BLAST of Spg022417 vs. ExPASy TrEMBL
Match: A0A6J1JCG9 (non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485521 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 1.8e-69 Identity = 147/181 (81.22%), Postives = 154/181 (85.08%), Query Frame = 0
BLAST of Spg022417 vs. ExPASy TrEMBL
Match: A0A6J1H7Z8 (non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita moschata OX=3662 GN=LOC111461313 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.2e-68 Identity = 147/181 (81.22%), Postives = 154/181 (85.08%), Query Frame = 0
BLAST of Spg022417 vs. ExPASy TrEMBL
Match: A0A1S3BRS5 (non-specific lipid transfer protein GPI-anchored 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492460 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 3.4e-63 Identity = 133/172 (77.33%), Postives = 145/172 (84.30%), Query Frame = 0
BLAST of Spg022417 vs. ExPASy TrEMBL
Match: A0A0A0M2I0 (Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G600910 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.3e-62 Identity = 131/176 (74.43%), Postives = 147/176 (83.52%), Query Frame = 0
BLAST of Spg022417 vs. ExPASy TrEMBL
Match: A0A1S3BRF5 (non-specific lipid transfer protein GPI-anchored 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492460 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 2.2e-62 Identity = 130/172 (75.58%), Postives = 144/172 (83.72%), Query Frame = 0
BLAST of Spg022417 vs. TAIR 10
Match: AT3G43720.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 109.8 bits (273), Expect = 2.3e-24 Identity = 79/179 (44.13%), Postives = 95/179 (53.07%), Query Frame = 0
BLAST of Spg022417 vs. TAIR 10
Match: AT3G43720.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 108.6 bits (270), Expect = 5.2e-24 Identity = 78/180 (43.33%), Postives = 97/180 (53.89%), Query Frame = 0
BLAST of Spg022417 vs. TAIR 10
Match: AT2G27130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 95.9 bits (237), Expect = 3.5e-20 Identity = 58/148 (39.19%), Postives = 81/148 (54.73%), Query Frame = 0
BLAST of Spg022417 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 93.2 bits (230), Expect = 2.2e-19 Identity = 61/167 (36.53%), Postives = 89/167 (53.29%), Query Frame = 0
BLAST of Spg022417 vs. TAIR 10
Match: AT2G13820.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 87.4 bits (215), Expect = 1.2e-17 Identity = 50/127 (39.37%), Postives = 72/127 (56.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|