
Spg022412 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGCAGTGCTGGTTGATCCCTTTTGCACTAATAGCGACGACTCTGCTGTGGTTGGAAGCTGCAGAAATAAACAACCATATGATCATAAGAAGCAAAACATTTTCATCCCCATCATTCCCCTCGACGCCTGGTTCAGTGGTCGAGAAATTCTACTACAACATCGACTTTCCAAAAGGCCATATTGCCATGAAGAGCTTCGATGTCGAAGTCGTAGATGAAACAGGCAATCAAGTGCCACTTCTCGAAACATATCTTCACCATTGGGCACTGGTGAGGTACTATCAACACAAAAATGCTCCAAACCCAAGTACCATAATATCTCATTCACTCATCTTCAGGAACCAGACTACATCATTGCGAGCAACGATGGAGTCTGCCAGAAGCACACTTTCCCCGAATACTATGGTAAAGGGCCTGATCAAGAGCAAACATTGACATTTCTTCCAAACCCATATGGAATAGAGGTTGGCAATGTCGCACGAGTTCCTTTGGGATATGAAGAAAGGTGTGGTGTCTTAATGTGCATGCCATAGATACTAGGGGCGTGGAGGAGGAAAGGATTCTGGGTATGTGGTTGGAATGTCAAGTTGTTATCCAGAGCCAGGCTCTGTGAAGATTAAGAATGAAGAATTATTGACAGTTGAATGTAAATATGGTGGTGAACAAAAGCACACGGGCGTTATGGGTCTATTCCATATTATGGTTGCCCACAAATTACCAAAGCCTTTGCTTACCATGAAAGCATCCGCCGACACCAACGTGTAA ATGTGGCAGTGCTGGTTGATCCCTTTTGCACTAATAGCGACGACTCTGCTGTGGTTGGAAGCTGCAGAAATAAACAACCATATGATCATAAGAAGCAAAACATTTTCATCCCCATCATTCCCCTCGACGCCTGGTTCAGTGGTCGAGAAATTCTACTACAACATCGACTTTCCAAAAGGCCATATTGCCATGAAGAGCTTCGATGTCGAAGTCGTAGATGAAACAGGCAATCAAGTGCCACTTCTCGAAACATATCTTCACCATTGGGCACTGGAACCAGACTACATCATTGCGAGCAACGATGGAGTCTGCCAGAAGCACACTTTCCCCGAATACTATGGTAAAGGGCCTGATCAAGAGCAAACATTGACATTTCTTCCAAACCCATATGGAATAGAGGGGCGTGGAGGAGGAAAGGATTCTGGGTATGTGGTTGGAATGTCAAGTTGTTATCCAGAGCCAGGCTCTGTGAAGATTAAGAATGAAGAATTATTGACAGTTGAATGTAAATATGGTGGTGAACAAAAGCACACGGGCGTTATGGGTCTATTCCATATTATGGTTGCCCACAAATTACCAAAGCCTTTGCTTACCATGAAAGCATCCGCCGACACCAACGTGTAA ATGTGGCAGTGCTGGTTGATCCCTTTTGCACTAATAGCGACGACTCTGCTGTGGTTGGAAGCTGCAGAAATAAACAACCATATGATCATAAGAAGCAAAACATTTTCATCCCCATCATTCCCCTCGACGCCTGGTTCAGTGGTCGAGAAATTCTACTACAACATCGACTTTCCAAAAGGCCATATTGCCATGAAGAGCTTCGATGTCGAAGTCGTAGATGAAACAGGCAATCAAGTGCCACTTCTCGAAACATATCTTCACCATTGGGCACTGGAACCAGACTACATCATTGCGAGCAACGATGGAGTCTGCCAGAAGCACACTTTCCCCGAATACTATGGTAAAGGGCCTGATCAAGAGCAAACATTGACATTTCTTCCAAACCCATATGGAATAGAGGGGCGTGGAGGAGGAAAGGATTCTGGGTATGTGGTTGGAATGTCAAGTTGTTATCCAGAGCCAGGCTCTGTGAAGATTAAGAATGAAGAATTATTGACAGTTGAATGTAAATATGGTGGTGAACAAAAGCACACGGGCGTTATGGGTCTATTCCATATTATGGTTGCCCACAAATTACCAAAGCCTTTGCTTACCATGAAAGCATCCGCCGACACCAACGTGTAA MWQCWLIPFALIATTLLWLEAAEINNHMIIRSKTFSSPSFPSTPGSVVEKFYYNIDFPKGHIAMKSFDVEVVDETGNQVPLLETYLHHWALEPDYIIASNDGVCQKHTFPEYYGKGPDQEQTLTFLPNPYGIEGRGGGKDSGYVVGMSSCYPEPGSVKIKNEELLTVECKYGGEQKHTGVMGLFHIMVAHKLPKPLLTMKASADTNV Homology
BLAST of Spg022412 vs. NCBI nr
Match: XP_022134628.1 (uncharacterized protein LOC111006852 [Momordica charantia]) HSP 1 Score: 168.7 bits (426), Expect = 5.3e-38 Identity = 128/428 (29.91%), Postives = 161/428 (37.62%), Query Frame = 0
BLAST of Spg022412 vs. NCBI nr
Match: XP_022988529.1 (uncharacterized protein LOC111485742 [Cucurbita maxima]) HSP 1 Score: 163.3 bits (412), Expect = 2.2e-36 Identity = 79/157 (50.32%), Postives = 101/157 (64.33%), Query Frame = 0
BLAST of Spg022412 vs. NCBI nr
Match: XP_023515680.1 (uncharacterized protein LOC111779774 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 162.9 bits (411), Expect = 2.9e-36 Identity = 77/152 (50.66%), Postives = 97/152 (63.82%), Query Frame = 0
BLAST of Spg022412 vs. NCBI nr
Match: XP_022921941.1 (uncharacterized protein LOC111430047 [Cucurbita moschata]) HSP 1 Score: 162.9 bits (411), Expect = 2.9e-36 Identity = 77/152 (50.66%), Postives = 97/152 (63.82%), Query Frame = 0
BLAST of Spg022412 vs. NCBI nr
Match: TYK28453.1 (uncharacterized protein E5676_scaffold629G00850 [Cucumis melo var. makuwa]) HSP 1 Score: 161.4 bits (407), Expect = 8.4e-36 Identity = 81/155 (52.26%), Postives = 105/155 (67.74%), Query Frame = 0
BLAST of Spg022412 vs. ExPASy TrEMBL
Match: A0A6J1C2J0 (uncharacterized protein LOC111006852 OS=Momordica charantia OX=3673 GN=LOC111006852 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 2.6e-38 Identity = 128/428 (29.91%), Postives = 161/428 (37.62%), Query Frame = 0
BLAST of Spg022412 vs. ExPASy TrEMBL
Match: A0A6J1JLU8 (uncharacterized protein LOC111485742 OS=Cucurbita maxima OX=3661 GN=LOC111485742 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36 Identity = 79/157 (50.32%), Postives = 101/157 (64.33%), Query Frame = 0
BLAST of Spg022412 vs. ExPASy TrEMBL
Match: A0A6J1E2R7 (uncharacterized protein LOC111430047 OS=Cucurbita moschata OX=3662 GN=LOC111430047 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 1.4e-36 Identity = 77/152 (50.66%), Postives = 97/152 (63.82%), Query Frame = 0
BLAST of Spg022412 vs. ExPASy TrEMBL
Match: A0A5D3DXK9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00850 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 4.1e-36 Identity = 81/155 (52.26%), Postives = 105/155 (67.74%), Query Frame = 0
BLAST of Spg022412 vs. ExPASy TrEMBL
Match: A0A5D3DXK9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00850 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 3.8e-10 Identity = 37/86 (43.02%), Postives = 48/86 (55.81%), Query Frame = 0
HSP 2 Score: 156.0 bits (393), Expect = 1.7e-34 Identity = 75/160 (46.88%), Postives = 100/160 (62.50%), Query Frame = 0
BLAST of Spg022412 vs. TAIR 10
Match: AT5G61820.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 108.2 bits (269), Expect = 7.9e-24 Identity = 52/137 (37.96%), Postives = 70/137 (51.09%), Query Frame = 0
HSP 2 Score: 68.6 bits (166), Expect = 6.9e-12 Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
Pages
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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