Spg022123 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022123
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	F-box protein At2g35280-like
Location	scaffold2: 9010711 .. 9011399 (-)
RNA-Seq Expression	Spg022123
Synteny	Spg022123

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATTTCCCCACCACCCATTGAATTCCTTCCCGAAGATTTACTAATTCAAGTGCTTGTCAAAGTTGCAACCTCTTCGTCGACTGATTTATTCAACGCTAAATTAGCCACCAAAGATTTTCTCGAAGCATCGATCGATGGCCAGATATTTCGCCACGTGTCGCTCGGAAGCTTCTCGAAAGTTCCATGGAAGACTAGTCCCGAATTCTTGTCGTTCATGGAGCATTGTAATAAGAATGGGAATCCTGAAGCTTTGTACAGAAAGGGCATGTTGGAATTCTTCACCCATCGTAAGGAGGCTTCTGGATTGGCGAATTTGAAAGCTTCTGCGGAGCAAGGCCATGCAGAAGCTTGTTGTGTATACAGTGTTGTTTTGAGTTCAACAGGTTTGGATAATGAGGGAGTGGAAATTTTTAAGAACTGTGAGGGCAGATTGGGAATTACTCGTCGGAGAGTTAAGGAATTTGTTGGGAATATTTGGATTAATAACAAAATTTCTTCACAGAAAAATATTTAAGTGATTGGAGGTGTTGTGATTGTGTTGATAATTATAAGAATAATAAAATAAGTGGATGGAATTGGAATGATGACGAAGATAATTATGGAGATCACACATGTGAAGTGTGTAAATGGAATGGAGAAGTTTTAAGATTTTGTAATATGTTGAGGACTGGTAGATATAATTAA

mRNA sequence

ATGGCAATTTCCCCACCACCCATTGAATTCCTTCCCGAAGATTTACTAATTCAAGTGCTTGTCAAAGTTGCAACCTCTTCGTCGACTGATTTATTCAACGCTAAATTAGCCACCAAAGATTTTCTCGAAGCATCGATCGATGGCCAGATATTTCGCCACGTGTCGCTCGGAAGCTTCTCGAAAGTTCCATGGAAGACTAGTCCCGAATTCTTGTCGTTCATGGAGCATTGTAATAAGAATGGGAATCCTGAAGCTTTGTACAGAAAGGGCATGTTGGAATTCTTCACCCATCGTAAGGAGGCTTCTGGATTGGCGAATTTGAAAGCTTCTGCGGAGCAAGGCCATGCAGAAGCTTGTTGTGTATACAGTGTTGTTTTGAGTTCAACAGGTTTGGATAATGAGGGAGTGGAAATTTTTAAGAACTGTGAGGGCAGATTGGGAATTACTCGTCGGAGAGTTAAGGAATTTAATAATAAAATAAGTGGATGGAATTGGAATGATGACGAAGATAATTATGGAGATCACACATGTGAAGTGTGTAAATGGAATGGAGAAGTTTTAAGATTTTGTAATATGTTGAGGACTGGTAGATATAATTAA

Coding sequence (CDS)

ATGGCAATTTCCCCACCACCCATTGAATTCCTTCCCGAAGATTTACTAATTCAAGTGCTTGTCAAAGTTGCAACCTCTTCGTCGACTGATTTATTCAACGCTAAATTAGCCACCAAAGATTTTCTCGAAGCATCGATCGATGGCCAGATATTTCGCCACGTGTCGCTCGGAAGCTTCTCGAAAGTTCCATGGAAGACTAGTCCCGAATTCTTGTCGTTCATGGAGCATTGTAATAAGAATGGGAATCCTGAAGCTTTGTACAGAAAGGGCATGTTGGAATTCTTCACCCATCGTAAGGAGGCTTCTGGATTGGCGAATTTGAAAGCTTCTGCGGAGCAAGGCCATGCAGAAGCTTGTTGTGTATACAGTGTTGTTTTGAGTTCAACAGGTTTGGATAATGAGGGAGTGGAAATTTTTAAGAACTGTGAGGGCAGATTGGGAATTACTCGTCGGAGAGTTAAGGAATTTAATAATAAAATAAGTGGATGGAATTGGAATGATGACGAAGATAATTATGGAGATCACACATGTGAAGTGTGTAAATGGAATGGAGAAGTTTTAAGATTTTGTAATATGTTGAGGACTGGTAGATATAATTAA

Protein sequence

MAISPPPIEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVPWKTSPEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACCVYSVVLSSTGLDNEGVEIFKNCEGRLGITRRRVKEFNNKISGWNWNDDEDNYGDHTCEVCKWNGEVLRFCNMLRTGRYN

Homology

[Close]

BLAST of Spg022123 vs. NCBI nr
Match: KAG6601105.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 253.4 bits (646), Expect = 1.6e-63
Identity = 130/233 (55.79%), Postives = 155/233 (66.52%), Query Frame = 0


Query: 4   SPPPIEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVP 63
           SPPPIE LP DLLI+VL KVA  S TDL +AKLATK FLEAS    IF+H SL +F K+ 
Sbjct: 28  SPPPIESLPNDLLIEVLAKVAACSFTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLL 87

Query: 64  WKTSPEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACCVYS 123
           W  S EF SFME CN NGNPE LYRKGMLEFFTH +EASG+A LK SA++G+ +AC VY 
Sbjct: 88  WNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYG 147

Query: 124 VVLSSTGLDNEGVEIFKNCEGRLGI----TRRRVKEF------NNKI------------- 183
           ++L +T +++EGV+  K CE +LG      RRRVKEF       NKI             
Sbjct: 148 IILYATSMEDEGVKFLKICEAKLGFKLAECRRRVKEFVYYLWVKNKIYVLENDSSDRRGC 207

Query: 184 --------------SGWNWNDDEDNYGDHTCEVCKWNGEVLRFCNMLRTGRYN 200
                         +GW+WND++D YG+HTCE CKWNGEVLRFCNMLRTG Y+
Sbjct: 208 ESVIKNCCKKNVRRNGWDWNDEDDYYGEHTCEACKWNGEVLRFCNMLRTGSYD 260

[Close]

BLAST of Spg022123 vs. NCBI nr
Match: KAG6601107.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251.9 bits (642), Expect = 4.6e-63
Identity = 128/233 (54.94%), Postives = 156/233 (66.95%), Query Frame = 0


Query: 4   SPPPIEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVP 63
           SPPPIE LP DLLI++L KVA SS TDL +AKLATK FLEAS    IF+H SL +F K+ 
Sbjct: 28  SPPPIESLPNDLLIEILAKVAASSFTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLL 87

Query: 64  WKTSPEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACCVYS 123
           W  S EF SF+E CN NGNPE LY+KGMLEFFTH +EASG+A LK SA++G+ +AC VY 
Sbjct: 88  WNNSKEFWSFVEKCNNNGNPETLYQKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYG 147

Query: 124 VVLSSTGLDNEGVEIFKNCEGRLGI----TRRRVKEF------NNKI------------- 183
           ++L +T +++EGV+  K CE +LG      RRRVKEF       NKI             
Sbjct: 148 IILYATSMEDEGVKFLKICEAKLGFKLAECRRRVKEFVYYLWVKNKIYVLENDSSDRRGC 207

Query: 184 --------------SGWNWNDDEDNYGDHTCEVCKWNGEVLRFCNMLRTGRYN 200
                         +GW+WND++D YG+HTCE CKWNGEVLRFCNMLRTG Y+
Sbjct: 208 ESVIKNCCKKNVRRNGWDWNDEDDYYGEHTCEACKWNGEVLRFCNMLRTGSYD 260

[Close]

BLAST of Spg022123 vs. NCBI nr
Match: XP_023549492.1 (putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.9 bits (642), Expect = 4.6e-63
Identity = 130/236 (55.08%), Postives = 155/236 (65.68%), Query Frame = 0


Query: 1   MAISPPPIEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFS 60
           ++ SPP IE LP DLLI+VL KVA SS TDL  AKLATK FLEAS    IF+H SL +F 
Sbjct: 25  LSASPPTIESLPNDLLIEVLAKVAASSFTDLVQAKLATKKFLEASNHNYIFQHASLENFQ 84

Query: 61  KVPWKTSPEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACC 120
           K+ W  S EF SFME CN NGNPE LYRKGMLEFFTH +EASG+  LK SA++G+ +AC 
Sbjct: 85  KLLWNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKLSAQKGYPDACY 144

Query: 121 VYSVVLSSTGLDNEGVEIFKNCEGRLGI----TRRRVKEF------NNKIS--------- 180
           VY ++L +T +++EGV+  K CE +LG      RRRVKEF       NKIS         
Sbjct: 145 VYGIILYTTSMEDEGVKFLKICEAKLGFKLVECRRRVKEFVRYLWVKNKISVPKKDSSDR 204

Query: 181 ------------------GWNWNDDEDNYGDHTCEVCKWNGEVLRFCNMLRTGRYN 200
                             GW+WND++D YG+HTCE CKWNGEVLRFCNMLRTG Y+
Sbjct: 205 RGCESVIKNCCKKNVRRIGWDWNDEDDYYGEHTCEACKWNGEVLRFCNMLRTGSYD 260

[Close]

BLAST of Spg022123 vs. NCBI nr
Match: XP_022957263.1 (F-box protein At2g35280-like [Cucurbita moschata])

HSP 1 Score: 248.4 bits (633), Expect = 5.0e-62
Identity = 130/233 (55.79%), Postives = 153/233 (65.67%), Query Frame = 0


Query: 4   SPPPIEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVP 63
           SPPPIE LP DLLI+VL KVA SS TDL +AKLATK FLEAS    IF+H SL +F K+ 
Sbjct: 28  SPPPIESLPNDLLIEVLAKVAASSFTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLL 87

Query: 64  WKTSPEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACCVYS 123
           W  S EF SFME CN NGNPE LYRKGMLEFFTH +EASG+A LK SA++G+ +AC VY 
Sbjct: 88  WNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYG 147

Query: 124 VVLSSTGLDNEGVEIFKNCEGRLGI----TRRRVKEF------NNKI------------- 183
           ++L +T +++EGV+  K CE +LG      R RVKEF       NKI             
Sbjct: 148 IILYATSMEDEGVKFLKICEAKLGFKLAKCRGRVKEFIYYLWVKNKIYVLENDSSNRRGC 207

Query: 184 --------------SGWNWNDDEDNYGDHTCEVCKWNGEVLRFCNMLRTGRYN 200
                          G +WND++D YG+HTCE CKWNGEVLRFCNMLRTG YN
Sbjct: 208 ESVIKNCCRKNVRRIGCDWNDEDDYYGEHTCEACKWNGEVLRFCNMLRTGSYN 260

[Close]

BLAST of Spg022123 vs. NCBI nr
Match: XP_022957262.1 (putative F-box protein At1g67623 [Cucurbita moschata])

HSP 1 Score: 248.4 bits (633), Expect = 5.0e-62
Identity = 128/233 (54.94%), Postives = 153/233 (65.67%), Query Frame = 0


Query: 4   SPPPIEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVP 63
           SPPPIE LP DLLI+VL KVA  S TDL +AKLATK FLEAS    IF+H SL +F K+ 
Sbjct: 7   SPPPIESLPNDLLIEVLAKVAACSYTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLL 66

Query: 64  WKTSPEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACCVYS 123
           W  S EF SFME CN NGNPE LYRKGMLEFFTH +EASG+A LK SA++G+ +AC VY 
Sbjct: 67  WNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYG 126

Query: 124 VVLSSTGLDNEGVEIFKNCEGRLGI----TRRRVKEF------NNKI------------- 183
           ++L +  +++EGV+  K CE +LG      R RVKEF       NKI             
Sbjct: 127 IILYAMSMEDEGVKFLKICEAKLGFKLAKCRGRVKEFIYCLWVKNKIYVLENDSSDRRGC 186

Query: 184 --------------SGWNWNDDEDNYGDHTCEVCKWNGEVLRFCNMLRTGRYN 200
                         +GW+WND++D YG+HTCE CKWNGEVLRFCNMLRTG Y+
Sbjct: 187 ESVIKNCCKKNVRRNGWDWNDEDDYYGEHTCEACKWNGEVLRFCNMLRTGSYD 239

[Close]

BLAST of Spg022123 vs. ExPASy Swiss-Prot
Match: Q9FXC7 (Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.3e-15
Identity = 59/201 (29.35%), Postives = 97/201 (48.26%), Query Frame = 0


Query: 8   IEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVPWKTS 67
           ++ LPEDLL+++      SS + + N +L +K F     +  +F  +SL     +PW  +
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 68  PEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACCVYSVVLS 127
                F+E C ++ NPEAL++KG + +F  + +  GL  L  +AE+G  EA  VY V+L 
Sbjct: 84  S--AKFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVILI 143

Query: 128 STG--LDNEGVEIFKNCEGRL-GITRRRVKEFNNKIS----GWNWNDD---EDNYGDHTC 187
             G     +G EI  +   +L   T   + EF  KI     G+ W+D+   E     +  
Sbjct: 144 CLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTVVEQLKTAYVS 203

Query: 188 EVCKWNGEVLRFCNMLRTGRY 199
           E CK + +      ++  G Y
Sbjct: 204 EKCKCDCKTRMLLLVMNRGWY 222

[Close]

BLAST of Spg022123 vs. ExPASy Swiss-Prot
Match: Q1PEW8 (F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08
Identity = 37/128 (28.91%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 8   IEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVPWKTS 67
           +E LP+DLL +++ K+   S+ D  N  L+ K+   ++ D ++ + ++L    K P    
Sbjct: 11  LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPLSCR 70

Query: 68  PEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACCVYSVVLS 127
              L  M+ C  N NP+A Y KG++ +F        L ++  +A  G  EA  +Y+++L 
Sbjct: 71  KHLL-IMKKCLANNNPDAHYIKGIIWYFNLDHCDVDLHHIGIAANGGQKEAIYMYAMLLL 130

Query: 128 STGLDNEG 136
             G   EG
Sbjct: 131 CRGRTEEG 137

[Close]

BLAST of Spg022123 vs. ExPASy TrEMBL
Match: A0A6J1GZQ6 (F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.4e-62
Identity = 130/233 (55.79%), Postives = 153/233 (65.67%), Query Frame = 0


Query: 4   SPPPIEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVP 63
           SPPPIE LP DLLI+VL KVA SS TDL +AKLATK FLEAS    IF+H SL +F K+ 
Sbjct: 28  SPPPIESLPNDLLIEVLAKVAASSFTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLL 87

Query: 64  WKTSPEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACCVYS 123
           W  S EF SFME CN NGNPE LYRKGMLEFFTH +EASG+A LK SA++G+ +AC VY 
Sbjct: 88  WNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYG 147

Query: 124 VVLSSTGLDNEGVEIFKNCEGRLGI----TRRRVKEF------NNKI------------- 183
           ++L +T +++EGV+  K CE +LG      R RVKEF       NKI             
Sbjct: 148 IILYATSMEDEGVKFLKICEAKLGFKLAKCRGRVKEFIYYLWVKNKIYVLENDSSNRRGC 207

Query: 184 --------------SGWNWNDDEDNYGDHTCEVCKWNGEVLRFCNMLRTGRYN 200
                          G +WND++D YG+HTCE CKWNGEVLRFCNMLRTG YN
Sbjct: 208 ESVIKNCCRKNVRRIGCDWNDEDDYYGEHTCEACKWNGEVLRFCNMLRTGSYN 260

[Close]

BLAST of Spg022123 vs. ExPASy TrEMBL
Match: A0A6J1GYN4 (putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458702 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.4e-62
Identity = 128/233 (54.94%), Postives = 153/233 (65.67%), Query Frame = 0


Query: 4   SPPPIEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVP 63
           SPPPIE LP DLLI+VL KVA  S TDL +AKLATK FLEAS    IF+H SL +F K+ 
Sbjct: 7   SPPPIESLPNDLLIEVLAKVAACSYTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLL 66

Query: 64  WKTSPEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACCVYS 123
           W  S EF SFME CN NGNPE LYRKGMLEFFTH +EASG+A LK SA++G+ +AC VY 
Sbjct: 67  WNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYG 126

Query: 124 VVLSSTGLDNEGVEIFKNCEGRLGI----TRRRVKEF------NNKI------------- 183
           ++L +  +++EGV+  K CE +LG      R RVKEF       NKI             
Sbjct: 127 IILYAMSMEDEGVKFLKICEAKLGFKLAKCRGRVKEFIYCLWVKNKIYVLENDSSDRRGC 186

Query: 184 --------------SGWNWNDDEDNYGDHTCEVCKWNGEVLRFCNMLRTGRYN 200
                         +GW+WND++D YG+HTCE CKWNGEVLRFCNMLRTG Y+
Sbjct: 187 ESVIKNCCKKNVRRNGWDWNDEDDYYGEHTCEACKWNGEVLRFCNMLRTGSYD 239

[Close]

BLAST of Spg022123 vs. ExPASy TrEMBL
Match: A0A6J1JRX4 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.2e-62
Identity = 128/236 (54.24%), Postives = 156/236 (66.10%), Query Frame = 0


Query: 1   MAISPPPIEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFS 60
           ++ SPP IE LP DLLI++L KVA SS TDL  AKLATK FLEAS    IF+H SL +F 
Sbjct: 25  LSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHASLENFH 84

Query: 61  KVPWKTSPEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACC 120
           K+ W  S EF SFME CN NGNPE LYRKGMLEFFTH +EASG+  LK SA++G++EAC 
Sbjct: 85  KLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKMSAQKGYSEACY 144

Query: 121 VYSVVLSSTGLDNEGVEIFKNCEGRLGI----TRRRVKEF------NNKIS--------- 180
           VY ++L +T +++EGV+  K CE +LG      RRRVKEF       NKIS         
Sbjct: 145 VYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRRVKEFVRHLWVKNKISVQEKYSNDR 204

Query: 181 ------------------GWNWNDDEDNYGDHTCEVCKWNGEVLRFCNMLRTGRYN 200
                             GW+WND+++ YG++TCE CKWNGEVLRFCNMLRTG Y+
Sbjct: 205 RGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEACKWNGEVLRFCNMLRTGSYD 260

[Close]

BLAST of Spg022123 vs. ExPASy TrEMBL
Match: A0A6J1JRV1 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.2e-62
Identity = 128/236 (54.24%), Postives = 156/236 (66.10%), Query Frame = 0


Query: 1   MAISPPPIEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFS 60
           ++ SPP IE LP DLLI++L KVA SS TDL  AKLATK FLEAS    IF+H SL +F 
Sbjct: 25  LSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHASLENFH 84

Query: 61  KVPWKTSPEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACC 120
           K+ W  S EF SFME CN NGNPE LYRKGMLEFFTH +EASG+  LK SA++G++EAC 
Sbjct: 85  KLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKMSAQKGYSEACY 144

Query: 121 VYSVVLSSTGLDNEGVEIFKNCEGRLGI----TRRRVKEF------NNKIS--------- 180
           VY ++L +T +++EGV+  K CE +LG      RRRVKEF       NKIS         
Sbjct: 145 VYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRRVKEFVRHLWVKNKISVQEKYSNDR 204

Query: 181 ------------------GWNWNDDEDNYGDHTCEVCKWNGEVLRFCNMLRTGRYN 200
                             GW+WND+++ YG++TCE CKWNGEVLRFCNMLRTG Y+
Sbjct: 205 RGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEACKWNGEVLRFCNMLRTGSYD 260

[Close]

BLAST of Spg022123 vs. ExPASy TrEMBL
Match: A0A6J1H022 (putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458700 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 9.6e-59
Identity = 124/232 (53.45%), Postives = 150/232 (64.66%), Query Frame = 0


Query: 5   PPPIEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVPW 64
           PP IE LP DLLI+VL KVA  S TDL  AKLATK+FLEAS  G IF+H SL +F K+ W
Sbjct: 8   PPTIESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEASSHGYIFQHASLRNFQKLLW 67

Query: 65  KTSPEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACCVYSV 124
             +PEF SFME CN NGNPE LY+KGMLEFFT+ +EASG+A LK SA++G++EAC VY +
Sbjct: 68  NNNPEFWSFMEKCNNNGNPETLYQKGMLEFFTYCREASGMAYLKLSAQKGYSEACYVYGI 127

Query: 125 VLSSTGLDNEGVEIFKNCEGRLGI----TRRRVKEF------NNKIS------------- 184
           +L +   ++EGV+  K CE +LG      RRRVKE        NKIS             
Sbjct: 128 ILYTASSEDEGVKFLKICEAKLGFKLAECRRRVKELVRYLWVKNKISLSKKDSSDQRGCE 187

Query: 185 --------------GWNWNDDEDNYGDHTCEVCKWNGEVLRFCNMLRTGRYN 200
                         GW+ ND++D YG+HTCE CKWN EV RFCNMLRTG Y+
Sbjct: 188 SVVKNCCKKNVRRIGWDGNDEDDYYGEHTCEACKWNEEVSRFCNMLRTGSYD 239

[Close]

BLAST of Spg022123 vs. TAIR 10
Match: AT1G67623.1 (F-box family protein )

HSP 1 Score: 82.4 bits (202), Expect = 4.5e-16
Identity = 59/201 (29.35%), Postives = 97/201 (48.26%), Query Frame = 0


Query: 8   IEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVPWKTS 67
           ++ LPEDLL+++      SS + + N +L +K F     +  +F  +SL     +PW  +
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 68  PEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACCVYSVVLS 127
                F+E C ++ NPEAL++KG + +F  + +  GL  L  +AE+G  EA  VY V+L 
Sbjct: 84  S--AKFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVILI 143

Query: 128 STG--LDNEGVEIFKNCEGRL-GITRRRVKEFNNKIS----GWNWNDD---EDNYGDHTC 187
             G     +G EI  +   +L   T   + EF  KI     G+ W+D+   E     +  
Sbjct: 144 CLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTVVEQLKTAYVS 203

Query: 188 EVCKWNGEVLRFCNMLRTGRY 199
           E CK + +      ++  G Y
Sbjct: 204 EKCKCDCKTRMLLLVMNRGWY 222

[Close]

BLAST of Spg022123 vs. TAIR 10
Match: AT1G74875.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G67623.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.0 bits (188), Expect = 1.9e-14
Identity = 39/118 (33.05%), Postives = 67/118 (56.78%), Query Frame = 0


Query: 17  IQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVPWKTSPEFLSFMEH 76
           I +++ V +SS ++  N +L +K F   S D  I + +SL     +PW+   +F +F + 
Sbjct: 21  IHLVINVLSSSLSEFRNLQLVSKSFKRISNDRYILQRLSLNKIPLLPWRNRKKFHNFFKR 80

Query: 77  CNKNGNPEALYRKGMLEFF----THRKEASGLANLKASAEQGHAEACCVYSVVLSSTG 131
           C K+GN EA+YRKG++++F      R+   GL ++  +A  G+ EA  VY ++L   G
Sbjct: 81  CRKSGNLEAIYRKGLVDYFHRDSHERQRDRGLKHIAKTANNGNQEAQYVYGLILICLG 138

[Close]

BLAST of Spg022123 vs. TAIR 10
Match: AT2G35280.1 (F-box family protein )

HSP 1 Score: 61.6 bits (148), Expect = 8.1e-10
Identity = 37/128 (28.91%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 8   IEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVPWKTS 67
           +E LP+DLL +++ K+   S+ D  N  L+ K+   ++ D ++ + ++L    K P    
Sbjct: 11  LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPLSCR 70

Query: 68  PEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACCVYSVVLS 127
              L  M+ C  N NP+A Y KG++ +F        L ++  +A  G  EA  +Y+++L 
Sbjct: 71  KHLL-IMKKCLANNNPDAHYIKGIIWYFNLDHCDVDLHHIGIAANGGQKEAIYMYAMLLL 130

Query: 128 STGLDNEG 136
             G   EG
Sbjct: 131 CRGRTEEG 137

[Close]

BLAST of Spg022123 vs. TAIR 10
Match: AT3G30430.1 (F-box family protein )

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 26/88 (29.55%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 8  IEFLPEDLLIQVLVKVATSSSTDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVPWKTS 67
          +E LP+DLL +++ K+    + D  N  L+ K+   ++ D ++ + ++L    K P    
Sbjct: 11 LEVLPQDLLGEIVAKIGAKYAEDYHNCILSCKELGASANDERVLKTLNLAPLVKKPLSCR 70

Query: 68 PEFLSFMEHCNKNGNPEALYRKGMLEFF 96
             L  M+ C  N NP+A Y KG++ +F
Sbjct: 71 KHLL-IMKKCLANNNPDAHYIKGIIWYF 97

[Close]

BLAST of Spg022123 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04
Identity = 32/119 (26.89%), Postives = 53/119 (44.54%), Query Frame = 0


Query: 9   EFLPEDLLIQVLVKVATSSS--TDLFNAKLATKDFLEASIDGQIFRHVSLGSFSKVPWKT 68
           E L +DL+I +L K+ATS+S  +D        K      +   +       + +    K 
Sbjct: 23  EDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEKW 82

Query: 69  SPEFLSFMEHCNKNGNPEALYRKGMLEFFTHRKEASGLANLKASAEQGHAEACCVYSVV 126
           S     F++ C   GN +A Y  GM+ F+  +   SG + +  +A + HA A    SV+
Sbjct: 83  SDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

The following BLAST results are available for this feature:

BLAST of Spg022123 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601105.1	1.6e-63	55.79	putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6601107.1	4.6e-63	54.94	putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023549492.1	4.6e-63	55.08	putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]	[more]
XP_022957263.1	5.0e-62	55.79	F-box protein At2g35280-like [Cucurbita moschata]	[more]
XP_022957262.1	5.0e-62	54.94	putative F-box protein At1g67623 [Cucurbita moschata]	[more]

BLAST of Spg022123 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXC7	6.3e-15	29.35	Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE...	[more]
Q1PEW8	1.1e-08	28.91	F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1	[more]

BLAST of Spg022123 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZQ6	2.4e-62	55.79	F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 ...	[more]
A0A6J1GYN4	2.4e-62	54.94	putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458702 P...	[more]
A0A6J1JRX4	3.2e-62	54.24	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=...	[more]
A0A6J1JRV1	3.2e-62	54.24	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=...	[more]
A0A6J1H022	9.6e-59	53.45	putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458700 P...	[more]

BLAST of Spg022123 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67623.1	4.5e-16	29.35	F-box family protein	[more]
AT1G74875.1	1.9e-14	33.05	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G35280.1	8.1e-10	28.91	F-box family protein	[more]
AT3G30430.1	2.5e-06	29.55	F-box family protein	[more]
AT5G50450.1	1.0e-04	26.89	HCP-like superfamily protein with MYND-type zinc finger	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33784:SF31	F-BOX PROTEIN	coord: 8..143
IPR040338	Putative F-box protein At1g67623-like	PANTHER	PTHR33784	OS05G0482100 PROTEIN	coord: 8..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022123.1	Spg022123.1	mRNA