Spg021930 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg021930
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box domain-containing protein
Locationscaffold2: 9707116 .. 9713741 (+)
RNA-Seq ExpressionSpg021930
SyntenySpg021930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATTTCCCCACCACCCATCGAATTCCTTCCCGAAGATTTACTAATCCAAGTGTTTGTCAAAGTTGCAACCTCTTCGTTGACCGATTTATTCAACGCCAAATTAGCCACCAAAGATTTTCTCGAAGCATCGTTCGACGGCCAGATATTTTGCCACGTGTCGCTCAAAAGCATCCCGAAAGTTCCATGGAAGACCAGCCCCAAATTCTTGTCGTTCATGGAGAATTGCAACAAGAATGGGAATCTAGAAGCTTTGTACAGAAAGGGCATGTTGGAATTTTTCACCCATTGTAAGGAAGTTTCTGGATTGGCGAATTTGAAAGCTTCTGCGGAGCAAGGCCATGCAGAAGCTTGTTATGTATACAATGTTGTTTTGTGTTCGACAGGTTTGGAGGATGAGGGAGTGAAATTTTTGAAGAAGTGTGAGGGCAGATTGAAAATTACTCGTCGGAGGGTTAAGGAATTTGTTAGGAATATTTGGATTAATAACAAAATTTCTTTACAGGAAAAAGATTTAAGTGATTGGAGGTGTTGTGATTGTGTTGATAATTATAAGAATAATAAAAGAAGTGGATGGAATTGGAATGATGACAAAGATAATTATGGAGATCACATGTGTGAAGTGTGTAAATGGAATGGAGAAGTTTTAAGATTTTGTAATATGTTGAGGACGGGGAGATATAATTAAATTTTTTTAAAAGGTTTTTTTTTTTTTTTTTAAATGTTAGGGGCTTCTGTAATTACAATCATGAGTTATTTAATGGAAATGATAATTGTTGTTTTAGCTATTTTAAGAAAAATTCAAAAATATTCGTAGCCTTTTAATTTAATATTGCATGTCTAAGATCTAGTTTTTGTGCCAAAGCTTATCGAGGATTTAAAATTGGAAATTGACTTTAAATATTTATAGGCTGGTTTGAATATTGCATAAATATTATTTTAAGTATAAAAACGGAATATAATACATGATTCTCTTTATTAAAGGAAAAAAAGTTTGTGTTTTCCTCTTCGATTTGGATTTTCTTTATTCAGCTTTCCTTTTTTTTTGTTTTTAAATTTTCTTTTATCAACAAAGGTGGTCTTCATTAAATAATAATATTTAACTAAATACATAAATAAATAAAAAATTAGTCTGTAATTAATTTCCCATTTCCTATTCTACTTTACGGTTTATATTGAGCCAACCTTGTAAGTTTTTAGTAGGAGGGACACAGATTGATATAATATTAAATTATAAATTTAGTCCATGAATTTTTAGATTTTAACAAAGGTCCTTGAACTAAGGTCGAAAGGGATATAAGAGGGGCTTAAACCATTAGAGCATTCAAAAAATTTGTGTTTTAATGACTTATAATATAAATATAATATTTTTAAATGTGGAGGGGGATTCGAGCTCCCCGGGCCTCACGTACGTCCGCCGCTAGATTGAATTTATGTCCAAAGTTACTTTGGTTTCTGGAGTGAGTAACTATGTCTTTATCTTCTATCGCTAAGCTCTTGGAACCATCATTCACTTAGAGTGCTATTCCAAAAATCGCTCTTGGAACCATCATTCACTTAGAGTGCTTTTCCAAAAATCTTGGATAGATTTGTCAGGGACAGTGACGCGTTCTCATTCCTTCGAGATCCAAATGAAAAAAAATGTAGAGTTATAAATTTGAAAACAAAAAACCAAACAAAACAAACTTTTTTGAGTGAGTTACCGTTTAAAACATAGTGTCATGAGAGTCAAAAATGATGGTTCCAAGAGCTTGGCGATAGAAGATAAAGACATAGTTACTCATGCCAGAAACCAAAGCAACTTTGGACATGAGATTTAATCCGGCCAAGGTAAGTTGCACTAGTAGGGAAGTAAGAAAAGGCAACTTTGATTCCATTATTATGATGTAAAGGTAAGTTTACTAATATGAAGAAGAAGGAAGAGCGGAAAAGAAATGAAACAGGTTAAGAAGGAAGAGAGGGAGAAAAAAAACAGGTTACGAATGTAAAATAAACTGATCAACAAAGTTTAATACACCAACTTCTAGCAGAAACAAAAATAATCTTCCACTTTCTAGATTGTTAAATTTGTTGAGAGTAGCCACTAATTGACTGGAAATTAAGAATTAGGACCCTTGGAGCCCTTATTTTTCATCTCCTTTGGCTTTACTCTTTAGCATTGCATCAACAAGTTGTAGCTTACCGCTTGCTTTTATTCCAATATCCAAATACTCCACCTCTCGGTTACATTGGTAATAATCCCCAAACACCCCTCAATAATATCTCAATATTTCATATGTATCGATTTCTAATTTTTAATATATAATGTATTGGTATTTATGCTATACAATCTGGAATATATATATATATATATATATATTTTTTGTTATACAGTAATCACAACTTCAAATATACCATGGATTATGATTTATGTGTTATATATCTAATGTGTAATATATATTTCTGTGGTACAATTAGGAACCCTTGTTAACATAATTGTCTAATAATTTGAAATATCATGTTTTCTCATATGAAATTATACCATATAGTAATTTATGTTTTTCACTGTAGTAATCTCGACATGAAAGATAACATCTAATATATATATGTGTATAGATAGATGATCACTACAAGAAACTTGACTATTTTTGAAGATCGCAACCTTCAAAAAAGTATTAAACAATCCTTTGATAAATCTCTTTTCGAAGGTTAGTAAAACCTTCAAAAACTGTCAGAAATAAACACCATCGAAAAAGCTTTTTTCAAAGGTACATTGGCGGTGGTGGAAGGAGCGGAGACAGCGGCTGTGGGTGTAATTGGACGAATATTATTTGAGCCTGAGGCCATTTTTTTGTTGGGCATGGGTTGTTGAAGGGTAGTTTAAAAGCATGACTTTGATGATGGACTTATATAAATATTGGTCTGTTTTGGTACTAAAACTCTTAACCATTTGAAAGTTGTTTTGGAGTATTTAGTTTTTTAAGCACTATCTTCTTCTTCCAAGGGCATGTATTTTATTGTGTTGTTCACACCGTTTTGGCTTTCGTCATATACATTATTATTATGTTGCTCAAAAGGTAGCACCAAACCAACCTAGAATAAGAAAAGTTATTTTGGAGAAGAGGGTACTACACCCTGGGCATCTTAAGGTAGCACCAAACCAACCTAGTCTTTAGTTTTTGACCACGTCTGGGCATCACCGGCAGACTGCAATGGTGACAGGGGCGGATCTATGAAGGGGTGTGCTCCCCTCAAATTATCTCGTCTTTATATTTTTAATATAATATAAGGAAATATTTATAATATTAATAGATAAAAATCATTTTATATAGCGAAACTAGTGTTTGGTTTATTGGTAAGGGGCACAATATATTCCTTAAGGTCAATGGTCCAAAACACGTGTGATGCAAGAATTTTTTTTTCTCCAAATTTCCCTTATTCAAACTATTTTTTGTTTTGTTGAGGTCTCCTCTTCTTTAAATTTCAACTTTTGTTTTGTGCTTTTCTTTTCTTCCGATTCAATTTTCATGTTATTTTGCTTTGACATCTATAAAAACAAAATCAGTGACAGGTTTTAAAAACAAAAATAATAGTTTTCTATCAGTAATAACTTTTTATCAGTGATAGAAGATTTATATCTGTGATAGTTCTATCAGAAGGATAGTTTTCTATCGCTGATAGAAATCAATCTTTACAATTAGTGATAGAAAGATAGATTTCTATTAGTGATAGAAGGTTTTATATCACTGATAAATTTCTATCAGTGATAGAAATCTTTTATCACCTATTTTGAACTACAACCAATCACCTTATTAAATCTATCTATGACGGAAAACAATAGCAAATTCCAAACAAAACACAGAAATAACTGATATAATTCTATCACTGATAGAATCTATCAGGAATCTATCCGTGATTGAATTTTGTCACTGATAGAATCTAGTAGTGATAAAAAAAAAATTTATTACATTTTTATGTATATTGTGCCCCCTATGTGAAATTCCTGGATCCGCCACTGCAATGGTGGATGGGGTGTCACCTGCTACTGCATAAGACCAAATAATTGATTGTGGGAGAAGACCATCGAGAGATTAGGGCTAGGATTAAACGATTTTTTATTTACATCTTATTTGTTTAAAACAATTTTAATTTGTGACCTATTTTTAATAGTTTAGTATTTTTTTTTTATTTTATAATTTATTTGCCTAGTAAGGAAATGAAGTAGCCTTGTCATCATATCCACGTCATCAAATAACGGTCCAGTCAGCATTCTGTTAAGTCAAAGTTAAGTCAGAGACCCATTCCCAGTTGTTTTTTTTTTTTAAAAAATCTATCTTCAATAAGATTAAGAAGTGGTTTAAAAAGAAATCTTGATTCCCACCTTTAAGTTGTTTTTAAAAAAATCTCATATTTGATAAAATTAAAAATTGGTTTAAAAAAATCTTCATTCCCACGTTTGTGTTGTTTTTTTAAAAAAAAAACATGTCTCATCCTCGATAAGATTAAGAATTGGTTTAAAAAACAATTTTTATTCCCACGTTTGTGTTGTTGTTTTTTAAAAAATCTCATATTTGATAAAATTAAGAATTGGTTTAAAAAACAATCTTATTTAATGTTCAAATTCCTCATTTGTCCTTCTTATTCAATTATTAATTATTTAATATTTAAGTATTTATTTATTATTTTGAACAAAATTTAAATAAATGTTATAAAATCTCTACATTCTGATTGAAAAAAATAATAATAAAATGATAAAATTGAAATAAATGTTATAAAATCTCTACATTCTCATTGAAAAAATAAACGATTATGATATATTATTAATTCTAATTGTTTTTCAGTTGTGACAATTAGAGATTTTTTATTTAATTATTAATTCTAATTGGTTTTTTGTGGTTATAATAAATAGAATTTTTAAAAATAAATTTTGTGAAATCTAATTTTGATCAATTGTTTTGATTTTTCAAAAATAAAAAGATAATTGAGTTTAATTTTCGATTAAATCTAATCAAGTTTTAAAATTAAATTTGAAAAACTAAAATTCAAATTAACTATTTTTAATTTCCAAAATTTCTAATTTGAAAAGATTTATCATAATTACCAGATTCACTTGAACCCTATAAATAGTGGTTTAAACCACGTAAGACATATCAAAAATCATCGATGAAATTTTGAGTTTAGACCATATAGACTTCTTTTTTATTTTTTTTTATTTTTTTATGGTTACAGTTTGCTAAGACTGTATAGCAAAAATGAGGCTATTGTCATTGGTGGATCTTGGCTCAAATGAATCTGCCCGCATTCCATATGCTCTCATTAAGGACACGCTTAGTGTAGATATATTTTCCCTTCCACAGACTTTTCTGTCATAGTTTATTTTTGTGATTTGGGTGTGATCTGTGCTTTAGATTAATGATGACGAGGTGGAACTGTGGATCGTGAAGGCCATTACTTCCAAATTGATTGACTGCAAAATGGACCAGATGAATGAAGTTGTGATTGTGACATTACAACAATTCTGGGCTACGATGTCGGTTTACATTTTTACAACAATGATGGATTGACTCAAAGATAACGGATTACTAAAAAGATGTCATTTTAAAAAAAAAATTGAAATTTCGGAAATTTGACCTACCATAACGGTTTAGGCCCGTTATGAAAGAACACCCTTCCATGTCGGTTTAAAACTGTTATGGGTGTTTTAAAAATTTGCCCAAAAATAGTTATCAACTATCACAGTTTCAAACCGTTATGAAAGAGATTGATTAATGACGGTTTTTGCCCGTCATGCAAGAGTAAATTAAAAAAGGCGCCGTGTTTTTCACGGTTTGACGGAACCTTTTCGGAAAAAAAATTAATAAAGATCACGGTTTCAAACCGTTATGAAAGTGATTCTTTAATGACGGTTTTCGCCTGTCATGTAAAGTAATTTAAAAAAGAAGCCGTGTTTTTCGCGGTTTGACGAAACTTTTTCGGAAAATATAATAATCAATGTCGGTTTGCGCCCGTCATGTAAGATACTCTTCCATGTCGGTTAATGCCCGTCATTAAAGGTTGGGCTTCAATGTCGGTTATGGACCGATAGTTAATTACAGGTTAGATGACGGGTTGGGCCCGTGATTACGAATGGCCTTCAATGTCGGTTTCGGCCCGTCATTAAAATGATGAGATTCAATGTCAGTTATGGGCCAATCGATATTAATGGGTTCATTGACGGTTTCGGTCCGTCATGAAAATGTGGCTTCGATCACGGTTTATAATCGACATGGAAAGATCACATTCCGACGTCGTTTTGATAACTTTAATCGCGCGACCTGTACTCTTTGAAACGACGTCGTTTTGCTCTCTCAAAATGAGCAAAACGACGTCGTTTGATTTTGAACTTTAAACGAATGGCCTTATTCAAAACGACGTTGTTTTGATTCAATAATCAAAACGACGTCGTTTTGATTTAGTAATTCGTTTGGGTTTAGGGCAAACGACCTCGTTTTGGCGTTGCAAGTTGCGATTGCACAAGAAGTCGTCTTCTACCTTCGATCAGTTGCTTGTAAACGCACGGTCTCTCATTCAAACCAACATCGTTTTGGAGTTTGTCCGAAATCAGTTGAATGCGACGATGGATTGAAGCAATCGACAGCGGTTTGA

mRNA sequence

ATGGCAATTTCCCCACCACCCATCGAATTCCTTCCCGAAGATTTACTAATCCAAGTGTTTGTCAAAGTTGCAACCTCTTCGTTGACCGATTTATTCAACGCCAAATTAGCCACCAAAGATTTTCTCGAAGCATCGTTCGACGGCCAGATATTTTGCCACGTGTCGCTCAAAAGCATCCCGAAAGTTCCATGGAAGACCAGCCCCAAATTCTTGTCGTTCATGGAGAATTGCAACAAGAATGGGAATCTAGAAGCTTTGTACAGAAAGGGCATGTTGGAATTTTTCACCCATTGTAAGGAAGTTTCTGGATTGGCGAATTTGAAAGCTTCTGCGGAGCAAGGCCATGCAGAAGCTTGTTATGTATACAATGTTGTTTTGTGTTCGACAGGTAAGTTTACTAATATGAAGAAGAAGGAAGAGCGGAAAAGAAATGAAACAGCATTGCATCAACAAGTTGTAGCTTACCGCTTGCTTTTATTCCAATATCCAAATACTCCACCTCTCGGTTACATTGCACCAAACCAACCTAGAATAAGAAAAGTTATTTTGGAGAAGAGGGTACTACACCCTGGGCATCTTAAGATTAATGATGACGAGGTGGAACTGTGGATCGTGAAGGCCATTACTTCCAAATTGATTGACTGCAAAATGGACCAGATGAATGAAGTTGTGATTGTGACATTACAACAATTCTGGGCTACGATGGCAAACGACCTCGTTTTGGCGTTGCAAGTTGCGATTGCACAAGAAGTCGTCTTCTACCTTCGATCAGTTGCTTGTAAACGCACGGTCTCTCATTCAAACCAACATCGTTTTGGAGTTTGTCCGAAATCAGTTGAATGCGACGATGGATTGAAGCAATCGACAGCGGTTTGA

Coding sequence (CDS)

ATGGCAATTTCCCCACCACCCATCGAATTCCTTCCCGAAGATTTACTAATCCAAGTGTTTGTCAAAGTTGCAACCTCTTCGTTGACCGATTTATTCAACGCCAAATTAGCCACCAAAGATTTTCTCGAAGCATCGTTCGACGGCCAGATATTTTGCCACGTGTCGCTCAAAAGCATCCCGAAAGTTCCATGGAAGACCAGCCCCAAATTCTTGTCGTTCATGGAGAATTGCAACAAGAATGGGAATCTAGAAGCTTTGTACAGAAAGGGCATGTTGGAATTTTTCACCCATTGTAAGGAAGTTTCTGGATTGGCGAATTTGAAAGCTTCTGCGGAGCAAGGCCATGCAGAAGCTTGTTATGTATACAATGTTGTTTTGTGTTCGACAGGTAAGTTTACTAATATGAAGAAGAAGGAAGAGCGGAAAAGAAATGAAACAGCATTGCATCAACAAGTTGTAGCTTACCGCTTGCTTTTATTCCAATATCCAAATACTCCACCTCTCGGTTACATTGCACCAAACCAACCTAGAATAAGAAAAGTTATTTTGGAGAAGAGGGTACTACACCCTGGGCATCTTAAGATTAATGATGACGAGGTGGAACTGTGGATCGTGAAGGCCATTACTTCCAAATTGATTGACTGCAAAATGGACCAGATGAATGAAGTTGTGATTGTGACATTACAACAATTCTGGGCTACGATGGCAAACGACCTCGTTTTGGCGTTGCAAGTTGCGATTGCACAAGAAGTCGTCTTCTACCTTCGATCAGTTGCTTGTAAACGCACGGTCTCTCATTCAAACCAACATCGTTTTGGAGTTTGTCCGAAATCAGTTGAATGCGACGATGGATTGAAGCAATCGACAGCGGTTTGA

Protein sequence

MAISPPPIEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVPWKTSPKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACYVYNVVLCSTGKFTNMKKKEERKRNETALHQQVVAYRLLLFQYPNTPPLGYIAPNQPRIRKVILEKRVLHPGHLKINDDEVELWIVKAITSKLIDCKMDQMNEVVIVTLQQFWATMANDLVLALQVAIAQEVVFYLRSVACKRTVSHSNQHRFGVCPKSVECDDGLKQSTAV
Homology
BLAST of Spg021930 vs. NCBI nr
Match: XP_022957263.1 (F-box protein At2g35280-like [Cucurbita moschata])

HSP 1 Score: 166.8 bits (421), Expect = 2.8e-37
Identity = 80/126 (63.49%), Postives = 95/126 (75.40%), Query Frame = 0

Query: 4   SPPPIEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVP 63
           SPPPIE LP DLLI+V  KVA SS TDL +AKLATK FLEAS    IF H SL++  K+ 
Sbjct: 28  SPPPIESLPNDLLIEVLAKVAASSFTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLL 87

Query: 64  WKTSPKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACYVYN 123
           W  S +F SFME CN NGN E LYRKGMLEFFTHC+E SG+A LK SA++G+ +ACYVY 
Sbjct: 88  WNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYG 147

Query: 124 VVLCST 130
           ++L +T
Sbjct: 148 IILYAT 153

BLAST of Spg021930 vs. NCBI nr
Match: KAG7031905.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 165.2 bits (417), Expect = 8.2e-37
Identity = 79/126 (62.70%), Postives = 95/126 (75.40%), Query Frame = 0

Query: 4   SPPPIEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVP 63
           SPPPIE LP DLLI+V  KVA SS TDL +AKLATK FLEAS    IF H SL++  K+ 
Sbjct: 28  SPPPIESLPNDLLIEVLAKVAASSFTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLL 87

Query: 64  WKTSPKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACYVYN 123
           W  S +F SFME CN NGN E LY+KGMLEFFTHC+E SG+A LK SA++G+ +ACYVY 
Sbjct: 88  WNNSKEFWSFMEKCNNNGNPETLYQKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYG 147

Query: 124 VVLCST 130
           ++L +T
Sbjct: 148 IILYAT 153

BLAST of Spg021930 vs. NCBI nr
Match: KAG6601105.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-36
Identity = 79/126 (62.70%), Postives = 94/126 (74.60%), Query Frame = 0

Query: 4   SPPPIEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVP 63
           SPPPIE LP DLLI+V  KVA  S TDL +AKLATK FLEAS    IF H SL++  K+ 
Sbjct: 28  SPPPIESLPNDLLIEVLAKVAACSFTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLL 87

Query: 64  WKTSPKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACYVYN 123
           W  S +F SFME CN NGN E LYRKGMLEFFTHC+E SG+A LK SA++G+ +ACYVY 
Sbjct: 88  WNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYG 147

Query: 124 VVLCST 130
           ++L +T
Sbjct: 148 IILYAT 153

BLAST of Spg021930 vs. NCBI nr
Match: XP_023549573.1 (F-box protein At2g35280-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-36
Identity = 79/126 (62.70%), Postives = 94/126 (74.60%), Query Frame = 0

Query: 4   SPPPIEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVP 63
           SPPPIE LP DLLI+V  KVA  S TDL +AKLATK FLEAS    IF H SL++  K+ 
Sbjct: 28  SPPPIESLPNDLLIEVLAKVAACSFTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLL 87

Query: 64  WKTSPKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACYVYN 123
           W  S +F SFME CN NGN E LYRKGMLEFFTHC+E SG+A LK SA++G+ +ACYVY 
Sbjct: 88  WNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYG 147

Query: 124 VVLCST 130
           ++L +T
Sbjct: 148 IILYAT 153

BLAST of Spg021930 vs. NCBI nr
Match: KAG6601107.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 163.3 bits (412), Expect = 3.1e-36
Identity = 77/126 (61.11%), Postives = 95/126 (75.40%), Query Frame = 0

Query: 4   SPPPIEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVP 63
           SPPPIE LP DLLI++  KVA SS TDL +AKLATK FLEAS    IF H SL++  K+ 
Sbjct: 28  SPPPIESLPNDLLIEILAKVAASSFTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLL 87

Query: 64  WKTSPKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACYVYN 123
           W  S +F SF+E CN NGN E LY+KGMLEFFTHC+E SG+A LK SA++G+ +ACYVY 
Sbjct: 88  WNNSKEFWSFVEKCNNNGNPETLYQKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYG 147

Query: 124 VVLCST 130
           ++L +T
Sbjct: 148 IILYAT 153

BLAST of Spg021930 vs. ExPASy Swiss-Prot
Match: Q9FXC7 (Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.4e-15
Identity = 46/129 (35.66%), Postives = 71/129 (55.04%), Query Frame = 0

Query: 8   IEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVPWKTS 67
           ++ LPEDLL+++      SSL+ + N +L +K F     +  +F  +SLK I  +PW  +
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 68  PKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACYVYNVVLC 127
                F+E C ++ N EAL++KG + +F    +  GL  L  +AE+G  EA YVY V+L 
Sbjct: 84  S--AKFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVILI 143

Query: 128 STGKFTNMK 137
             G  T  K
Sbjct: 144 CLGGKTKQK 150

BLAST of Spg021930 vs. ExPASy Swiss-Prot
Match: Q1PEW8 (F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07
Identity = 38/126 (30.16%), Postives = 65/126 (51.59%), Query Frame = 0

Query: 8   IEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVPWKTS 67
           +E LP+DLL ++  K+   S  D  N  L+ K+   ++ D ++   ++L  + K P  + 
Sbjct: 11  LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKP-LSC 70

Query: 68  PKFLSFMENCNKNGNLEALYRKGMLEFFT--HCKEVSGLANLKASAEQGHAEACYVYNVV 127
            K L  M+ C  N N +A Y KG++ +F   HC     L ++  +A  G  EA Y+Y ++
Sbjct: 71  RKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCD--VDLHHIGIAANGGQKEAIYMYAML 130

Query: 128 LCSTGK 132
           L   G+
Sbjct: 131 LLCRGR 133

BLAST of Spg021930 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.5e-04
Identity = 32/119 (26.89%), Postives = 53/119 (44.54%), Query Frame = 0

Query: 9   EFLPEDLLIQVFVKVAT--SSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVPWKT 68
           E L +DL+I +  K+AT  SS +D        K          +      +++     K 
Sbjct: 23  EDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEKW 82

Query: 69  SPKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACYVYNVV 126
           S     F++ C   GN++A Y  GM+ F+     VSG + +  +A + HA A Y  +V+
Sbjct: 83  SDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

BLAST of Spg021930 vs. ExPASy TrEMBL
Match: A0A6J1GZQ6 (F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.4e-37
Identity = 80/126 (63.49%), Postives = 95/126 (75.40%), Query Frame = 0

Query: 4   SPPPIEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVP 63
           SPPPIE LP DLLI+V  KVA SS TDL +AKLATK FLEAS    IF H SL++  K+ 
Sbjct: 28  SPPPIESLPNDLLIEVLAKVAASSFTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLL 87

Query: 64  WKTSPKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACYVYN 123
           W  S +F SFME CN NGN E LYRKGMLEFFTHC+E SG+A LK SA++G+ +ACYVY 
Sbjct: 88  WNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYG 147

Query: 124 VVLCST 130
           ++L +T
Sbjct: 148 IILYAT 153

BLAST of Spg021930 vs. ExPASy TrEMBL
Match: A0A6J1JRX4 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.5e-36
Identity = 78/129 (60.47%), Postives = 95/129 (73.64%), Query Frame = 0

Query: 1   MAISPPPIEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIP 60
           ++ SPP IE LP DLLI++  KVA SS TDL  AKLATK FLEAS    IF H SL++  
Sbjct: 25  LSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHASLENFH 84

Query: 61  KVPWKTSPKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACY 120
           K+ W  S +F SFME CN NGN E LYRKGMLEFFTHC+E SG+  LK SA++G++EACY
Sbjct: 85  KLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKMSAQKGYSEACY 144

Query: 121 VYNVVLCST 130
           VY ++L +T
Sbjct: 145 VYGIILYAT 153

BLAST of Spg021930 vs. ExPASy TrEMBL
Match: A0A6J1JRV1 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.5e-36
Identity = 78/129 (60.47%), Postives = 95/129 (73.64%), Query Frame = 0

Query: 1   MAISPPPIEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIP 60
           ++ SPP IE LP DLLI++  KVA SS TDL  AKLATK FLEAS    IF H SL++  
Sbjct: 25  LSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHASLENFH 84

Query: 61  KVPWKTSPKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACY 120
           K+ W  S +F SFME CN NGN E LYRKGMLEFFTHC+E SG+  LK SA++G++EACY
Sbjct: 85  KLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKMSAQKGYSEACY 144

Query: 121 VYNVVLCST 130
           VY ++L +T
Sbjct: 145 VYGIILYAT 153

BLAST of Spg021930 vs. ExPASy TrEMBL
Match: A0A6J1GYN4 (putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458702 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.0e-36
Identity = 78/123 (63.41%), Postives = 92/123 (74.80%), Query Frame = 0

Query: 4   SPPPIEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVP 63
           SPPPIE LP DLLI+V  KVA  S TDL +AKLATK FLEAS    IF H SL++  K+ 
Sbjct: 7   SPPPIESLPNDLLIEVLAKVAACSYTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLL 66

Query: 64  WKTSPKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACYVYN 123
           W  S +F SFME CN NGN E LYRKGMLEFFTHC+E SG+A LK SA++G+ +ACYVY 
Sbjct: 67  WNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYG 126

Query: 124 VVL 127
           ++L
Sbjct: 127 IIL 129

BLAST of Spg021930 vs. ExPASy TrEMBL
Match: A0A6J1H022 (putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458700 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.4e-36
Identity = 76/122 (62.30%), Postives = 93/122 (76.23%), Query Frame = 0

Query: 5   PPPIEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVPW 64
           PP IE LP DLLI+V  KVA  S TDL  AKLATK+FLEAS  G IF H SL++  K+ W
Sbjct: 8   PPTIESLPNDLLIEVLAKVAAFSFTDLVQAKLATKEFLEASSHGYIFQHASLRNFQKLLW 67

Query: 65  KTSPKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACYVYNV 124
             +P+F SFME CN NGN E LY+KGMLEFFT+C+E SG+A LK SA++G++EACYVY +
Sbjct: 68  NNNPEFWSFMEKCNNNGNPETLYQKGMLEFFTYCREASGMAYLKLSAQKGYSEACYVYGI 127

Query: 125 VL 127
           +L
Sbjct: 128 IL 129

BLAST of Spg021930 vs. TAIR 10
Match: AT1G74875.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G67623.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.1 bits (222), Expect = 3.1e-18
Identity = 47/120 (39.17%), Postives = 74/120 (61.67%), Query Frame = 0

Query: 17  IQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVPWKTSPKFLSFMEN 76
           I + + V +SSL++  N +L +K F   S D  I   +SL  IP +PW+   KF +F + 
Sbjct: 21  IHLVINVLSSSLSEFRNLQLVSKSFKRISNDRYILQRLSLNKIPLLPWRNRKKFHNFFKR 80

Query: 77  CNKNGNLEALYRKGMLEFF---THCKEVS-GLANLKASAEQGHAEACYVYNVVL-CSTGK 132
           C K+GNLEA+YRKG++++F   +H ++   GL ++  +A  G+ EA YVY ++L C  GK
Sbjct: 81  CRKSGNLEAIYRKGLVDYFHRDSHERQRDRGLKHIAKTANNGNQEAQYVYGLILICLGGK 140

BLAST of Spg021930 vs. TAIR 10
Match: AT1G67623.1 (F-box family protein )

HSP 1 Score: 83.2 bits (204), Expect = 3.8e-16
Identity = 46/129 (35.66%), Postives = 71/129 (55.04%), Query Frame = 0

Query: 8   IEFLPEDLLIQVFVKVATSSLTDLFNAKLATKDFLEASFDGQIFCHVSLKSIPKVPWKTS 67
           ++ LPEDLL+++      SSL+ + N +L +K F     +  +F  +SLK I  +PW  +
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 68  PKFLSFMENCNKNGNLEALYRKGMLEFFTHCKEVSGLANLKASAEQGHAEACYVYNVVLC 127
                F+E C ++ N EAL++KG + +F    +  GL  L  +AE+G  EA YVY V+L 
Sbjct: 84  S--AKFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVILI 143

Query: 128 STGKFTNMK 137
             G  T  K
Sbjct: 144 CLGGKTKQK 150

BLAST of Spg021930 vs. TAIR 10
Match: AT5G15610.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.5e-09
Identity = 26/35 (74.29%), Postives = 34/35 (97.14%), Query Frame = 0

Query: 193 LKINDDEVELWIVKAITSKLIDCKMDQMNEVVIVT 228
           L++ND+EVELW+VKAIT+KL+ CKMDQMN+VVIV+
Sbjct: 324 LQVNDEEVELWVVKAITAKLVACKMDQMNQVVIVS 358

BLAST of Spg021930 vs. TAIR 10
Match: AT5G15610.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 59.7 bits (143), Expect = 4.5e-09
Identity = 26/34 (76.47%), Postives = 33/34 (97.06%), Query Frame = 0

Query: 193 LKINDDEVELWIVKAITSKLIDCKMDQMNEVVIV 227
           L++ND+EVELW+VKAIT+KL+ CKMDQMN+VVIV
Sbjct: 324 LQVNDEEVELWVVKAITAKLVACKMDQMNQVVIV 357

BLAST of Spg021930 vs. TAIR 10
Match: AT3G02200.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.7e-08
Identity = 25/35 (71.43%), Postives = 34/35 (97.14%), Query Frame = 0

Query: 193 LKINDDEVELWIVKAITSKLIDCKMDQMNEVVIVT 228
           L++N+ +VELWIVKAIT+KLI+CKMDQMN+V+IV+
Sbjct: 324 LQVNEQDVELWIVKAITAKLIECKMDQMNQVLIVS 358

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022957263.12.8e-3763.49F-box protein At2g35280-like [Cucurbita moschata][more]
KAG7031905.18.2e-3762.70putative F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6601105.11.1e-3662.70putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023549573.11.1e-3662.70F-box protein At2g35280-like [Cucurbita pepo subsp. pepo][more]
KAG6601107.13.1e-3661.11putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
Q9FXC75.4e-1535.66Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE... [more]
Q1PEW81.1e-0730.16F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1[more]
Q9FK271.5e-0426.89F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1GZQ61.4e-3763.49F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 ... [more]
A0A6J1JRX41.5e-3660.47putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=... [more]
A0A6J1JRV11.5e-3660.47putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=... [more]
A0A6J1GYN42.0e-3663.41putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458702 P... [more]
A0A6J1H0224.4e-3662.30putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458700 P... [more]
Match NameE-valueIdentityDescription
AT1G74875.13.1e-1839.17FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT1G67623.13.8e-1635.66F-box family protein [more]
AT5G15610.23.5e-0974.29Proteasome component (PCI) domain protein [more]
AT5G15610.14.5e-0976.47Proteasome component (PCI) domain protein [more]
AT3G02200.21.7e-0871.43Proteasome component (PCI) domain protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 193..226
e-value: 3.2E-6
score: 27.6
IPR040338Putative F-box protein At1g67623-likePANTHERPTHR33784OS05G0482100 PROTEINcoord: 8..134
NoneNo IPR availablePANTHERPTHR33784:SF31F-BOX PROTEINcoord: 8..134

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg021930.1Spg021930.1mRNA