Spg021924 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg021924
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	zinc finger Ran-binding domain-containing protein 2-like
Location	scaffold2: 6681986 .. 6683036 (-)
RNA-Seq Expression	Spg021924
Synteny	Spg021924

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGGAATGAGCTGGTCAGGAGGAGACTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAGAAAAGAGAAGCATGCCATCGATGCAGTTACCCCAAGTATGGAGGCCCAGACCCTTCAACTTACAGTTACAACAAGACGGAGGTGTTGGCTGGAGACTGGTACTGCAACGCCGTAAGCTGCGGAGCTCACAACTACGCCAGCCGCCCAAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCGCCTGGATGGAAATCTGGCGACTGGATTTGCCCTAGGTACACACACAACAATAAACTTTATAGTACAAGTTGATCAAATTATTAAAGCCATTGAAATGAGTATAACTTCTCCAGTTATTATTGCACGTTCTGAAAGAAACTTGAATGCAGATTGATAGAAACTGCATAAATTCACACCTGCATTATTTTCAGCTAGAGAACTTCAAATTCTTTTCTCAAAAGATCATGCTGAAAATCTACGATAAAATTGGTTAGCCTAATTAATACTTAATGTCGTTTTGTACAGAATGGGATGCGGAGTACATAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTAGGTTTATATCAATTAAAACATCTACCGTTGTTATCTGCTACTCAAAAAGTGGTTAATGAAATTAACCAGTTAATGGGGTTTCACTGTGGGTCACTTGGGTCTAATACAATTTTGGGTGCTCTATCTTTCAGGTGGTGCAGTTTAAAGCGGGAAGGAATTTTGGAAGGCTCTCCTTATGCGATTATATCGCCTTCTTGGCATCTGATCCCTATCCAAATGCTGCCTTTTTCTTTTTCTTTTTTCCTTTCTAATGACTAACAATAATAATGTTAAGCCCTTAGAATGATCCTCAATATGGATATCATGGGTGAAGGCCCATTTTTCCCCAACTAGCATTGCAATATAGCTAACTACTTTCTCTCTCTCTCTCTCTCTAATGGGTG

mRNA sequence

AAGGGAATGAGCTGGTCAGGAGGAGACTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAGAAAAGAGAAGCATGCCATCGATGCAGTTACCCCAAGTATGGAGGCCCAGACCCTTCAACTTACAGTTACAACAAGACGGAGGTGTTGGCTGGAGACTGGTACTGCAACGCCGTAAGCTGCGGAGCTCACAACTACGCCAGCCGCCCAAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCGCCTGGATGGAAATCTGGCGACTGGATTTGCCCTAGGTACACACACAACAATAAACTTTATAAATGGGATGCGGAGTACATAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTGGTGCAGTTTAAAGCGGGAAGGAATTTTGGAAGGCTCTCCTTATGCGATTATATCGCCTTCTTGGCATCTGATCCCTATCCAAATGCTGCCTTTTTCTTTTTCTTTTTTCCTTTCTAA

Coding sequence (CDS)

AAGGGAATGAGCTGGTCAGGAGGAGACTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAGAAAAGAGAAGCATGCCATCGATGCAGTTACCCCAAGTATGGAGGCCCAGACCCTTCAACTTACAGTTACAACAAGACGGAGGTGTTGGCTGGAGACTGGTACTGCAACGCCGTAAGCTGCGGAGCTCACAACTACGCCAGCCGCCCAAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCGCCTGGATGGAAATCTGGCGACTGGATTTGCCCTAGGTACACACACAACAATAAACTTTATAAATGGGATGCGGAGTACATAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTGGTGCAGTTTAAAGCGGGAAGGAATTTTGGAAGGCTCTCCTTATGCGATTATATCGCCTTCTTGGCATCTGATCCCTATCCAAATGCTGCCTTTTTCTTTTTCTTTTTTCCTTTCTAA

Protein sequence

KGMSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRYTHNNKLYKWDAEYIIMQAGWSVLNAKHQEISVVQFKAGRNFGRLSLCDYIAFLASDPYPNAAFFFFFFPF

Homology

[Close]

BLAST of Spg021924 vs. NCBI nr
Match: KAG6589864.1 (hypothetical protein SDJN03_15287, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276.9 bits (707), Expect = 1.2e-70
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 3   MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCG 62
           MSWS GDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYC AVSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60

Query: 63  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRYTHNNKL 122
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPRY HNNKL
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRYIHNNKL 120

Query: 123 Y 124
           Y
Sbjct: 121 Y 121

[Close]

BLAST of Spg021924 vs. NCBI nr
Match: XP_008465020.2 (PREDICTED: uncharacterized protein LOC103502740 isoform X3 [Cucumis melo])

HSP 1 Score: 260.4 bits (664), Expect = 1.2e-65
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   KGMSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVS 60
           KGMSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC  VS
Sbjct: 67  KGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVS 126

Query: 61  CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 116
           CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR
Sbjct: 127 CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 181

[Close]

BLAST of Spg021924 vs. NCBI nr
Match: XP_008465021.2 (PREDICTED: uncharacterized protein LOC103502740 isoform X2 [Cucumis melo])

HSP 1 Score: 260.4 bits (664), Expect = 1.2e-65
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   KGMSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVS 60
           KGMSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC  VS
Sbjct: 68  KGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVS 127

Query: 61  CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 116
           CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR
Sbjct: 128 CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 182

[Close]

BLAST of Spg021924 vs. NCBI nr
Match: KAE8653078.1 (hypothetical protein Csa_020050 [Cucumis sativus])

HSP 1 Score: 260.4 bits (664), Expect = 1.2e-65
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   KGMSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVS 60
           KGMSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC  VS
Sbjct: 67  KGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVS 126

Query: 61  CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 116
           CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR
Sbjct: 127 CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 181

[Close]

BLAST of Spg021924 vs. NCBI nr
Match: XP_008465019.2 (PREDICTED: uncharacterized protein LOC103502740 isoform X1 [Cucumis melo])

HSP 1 Score: 260.4 bits (664), Expect = 1.2e-65
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   KGMSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVS 60
           KGMSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC  VS
Sbjct: 68  KGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVS 127

Query: 61  CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 116
           CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR
Sbjct: 128 CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 182

[Close]

BLAST of Spg021924 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-05
Identity = 40/158 (25.32%), Postives = 54/158 (34.18%), Query Frame = 0


Query: 8   GDWICNVCQNVNFKKREACHRCSYP---------------------------------KY 67
           GDW C +C   NF++R +C RCS+P                                  Y
Sbjct: 345 GDWNCPMCGFSNFQRRTSCFRCSFPGPTHVSAATGSNTFSPDFPYGNSYGNGSSHFIANY 404

Query: 68  GGP------------------------DPSTYSY-NKTEVLAGDWYCNAVSCGAHNYASR 105
           GG                           S+ S+       AGDW C +  CG HN+A  
Sbjct: 405 GGSVHHSNENTMQSDLQHQNGNNAVNHHHSSRSFGGNVPFRAGDWKCGSEGCGYHNFAKN 464

[Close]

BLAST of Spg021924 vs. ExPASy TrEMBL
Match: A0A0A0LWE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G306810 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.8e-66
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   KGMSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVS 60
           KGMSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC  VS
Sbjct: 68  KGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVS 127

Query: 61  CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 116
           CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR
Sbjct: 128 CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 182

[Close]

BLAST of Spg021924 vs. ExPASy TrEMBL
Match: A0A1S3CPF6 (uncharacterized protein LOC103502740 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502740 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.8e-66
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   KGMSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVS 60
           KGMSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC  VS
Sbjct: 67  KGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVS 126

Query: 61  CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 116
           CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR
Sbjct: 127 CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 181

[Close]

BLAST of Spg021924 vs. ExPASy TrEMBL
Match: A0A1S3CMY6 (uncharacterized protein LOC103502740 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502740 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.8e-66
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   KGMSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVS 60
           KGMSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC  VS
Sbjct: 68  KGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVS 127

Query: 61  CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 116
           CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR
Sbjct: 128 CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 182

[Close]

BLAST of Spg021924 vs. ExPASy TrEMBL
Match: A0A1S3CNB1 (uncharacterized protein LOC103502740 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502740 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.8e-66
Identity = 110/115 (95.65%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   KGMSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVS 60
           KGMSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC  VS
Sbjct: 68  KGMSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVS 127

Query: 61  CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 116
           CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR
Sbjct: 128 CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 182

[Close]

BLAST of Spg021924 vs. ExPASy TrEMBL
Match: A0A6J1JBM0 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485301 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 7.6e-66
Identity = 110/113 (97.35%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 3   MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCG 62
           MSWS GDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYC AVSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60

Query: 63  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPR 116
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPR 113

[Close]

BLAST of Spg021924 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-43
Identity = 72/115 (62.61%), Postives = 90/115 (78.26%), Query Frame = 0


Query: 3   MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCG 62
           MSW+GGDW+C  CQ+ NFKKRE+C +C YPK+GG D STY YN+TEV+AGDWYC A++CG
Sbjct: 1   MSWTGGDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTYLYNRTEVMAGDWYCGALNCG 60

Query: 63  AHNYASRPNCFRCGAFKSVYPGD-YGAYMMGSDQYGSD-ASIPPGWKSGDWICPR 116
           +HNYASR +C+RCG  K  Y    YGA M+    YG+D A+ PPGWK+GDW+CPR
Sbjct: 61  SHNYASRTSCYRCGMIKVEYTEQYYGAQMVA---YGNDGAACPPGWKTGDWVCPR 112

[Close]

BLAST of Spg021924 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 3.9e-22
Identity = 49/137 (35.77%), Postives = 68/137 (49.64%), Query Frame = 0


Query: 8   GDWICNVCQNVNFKKREACHRCSYPKYGG------------PDPSTYSYNK-TEVLAGDW 67
           GDW C +C ++NF++R++C RC  P+ GG            P  S++ +N   +V  GDW
Sbjct: 5   GDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDW 64

Query: 68  YCNAVSCGAHNYASRPNCFRCGAFKSVYPGD----------------YGAYMMGSDQYGS 116
           YCN   CG HN+A+R +CF+CGA K  +                    G +  G    G 
Sbjct: 65  YCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGG 124

[Close]

BLAST of Spg021924 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 3.6e-20
Identity = 49/131 (37.40%), Postives = 67/131 (51.15%), Query Frame = 0


Query: 8   GDWICNVCQNVNFKKREACHRC-------------SYPKYGGPDPSTYSYNK-TEVLAGD 67
           GDW C  C ++NF++R++C RC              +  +GG   S + +   ++V  GD
Sbjct: 5   GDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDVRPGD 64

Query: 68  WYCNAVSCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMMGSDQYGSD--ASIPPG----- 116
           WYC   +CG HN+ASR  CF+CG FK     G  G  + G   + +D   S  PG     
Sbjct: 65  WYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRS 124

[Close]

BLAST of Spg021924 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 69.3 bits (168), Expect = 3.7e-12
Identity = 44/136 (32.35%), Postives = 57/136 (41.91%), Query Frame = 0


Query: 8   GDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYA 67
           GDW C  C+N N+  R  C+RC  P+    D +T   +K     GDW C    C  +NYA
Sbjct: 7   GDWECLGCRNRNYAFRSFCNRCKQPRL-IMDNNTSPNSKWLPRIGDWIC--TGCTNNNYA 66

Query: 68  SRPNCFRCGAFKSV-------YPG-----------------DYGAYMMGSDQYGSDASIP 120
           SR  C +CG  K V        PG                 D    ++      + AS+ 
Sbjct: 67  SREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQPGSLLAFSNATNQASVH 126

[Close]

BLAST of Spg021924 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.7e-04
Identity = 22/83 (26.51%), Postives = 35/83 (42.17%), Query Frame = 0


Query: 8   GDWICNVCQNVNFKKREACHRCS-YPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNY 67
           GDW C  C+ +NF K   C RC  + +           +   +  GDW C   +C   N+
Sbjct: 236 GDWYCTECKFLNFAKNIRCLRCDVFSEERLKQLKEEQKDHLPLKKGDWICQ--TCNFLNF 295

Query: 68  ASRPNCFRC---GAFKSVYPGDY 87
           +    C RC      + + PG++
Sbjct: 296 SKNTRCLRCKDKPTLRQINPGEW 316

The following BLAST results are available for this feature:

BLAST of Spg021924 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589864.1	1.2e-70	96.69	hypothetical protein SDJN03_15287, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008465020.2	1.2e-65	95.65	PREDICTED: uncharacterized protein LOC103502740 isoform X3 [Cucumis melo]	[more]
XP_008465021.2	1.2e-65	95.65	PREDICTED: uncharacterized protein LOC103502740 isoform X2 [Cucumis melo]	[more]
KAE8653078.1	1.2e-65	95.65	hypothetical protein Csa_020050 [Cucumis sativus]	[more]
XP_008465019.2	1.2e-65	95.65	PREDICTED: uncharacterized protein LOC103502740 isoform X1 [Cucumis melo]	[more]

BLAST of Spg021924 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13801	1.1e-05	25.32	Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra...	[more]

BLAST of Spg021924 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWE1	5.8e-66	95.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G306810 PE=4 SV=1	[more]
A0A1S3CPF6	5.8e-66	95.65	uncharacterized protein LOC103502740 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CMY6	5.8e-66	95.65	uncharacterized protein LOC103502740 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CNB1	5.8e-66	95.65	uncharacterized protein LOC103502740 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1JBM0	7.6e-66	97.35	zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=...	[more]

BLAST of Spg021924 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26695.1	1.4e-43	62.61	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	3.9e-22	35.77	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT3G15680.1	3.6e-20	37.40	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G17975.1	3.7e-12	32.35	zinc finger (Ran-binding) family protein	[more]
AT1G70650.1	3.7e-04	26.51	Ran BP2/NZF zinc finger-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 52..78 e-value: 6.5E-5 score: 32.3 coord: 8..32 e-value: 1.6E-5 score: 34.4
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 8..34 e-value: 4.0E-6 score: 26.1 coord: 51..79 e-value: 1.5E-6 score: 27.4
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 54..75
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 10..29
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 50..81 score: 9.145193
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 6..35 score: 8.919349
None	No IPR available	GENE3D	4.10.1060.10		coord: 41..81 e-value: 8.2E-11 score: 43.0 coord: 1..37 e-value: 2.9E-10 score: 41.2
None	No IPR available	PANTHER	PTHR23111:SF41	ZINC FINGER, RANBP2-TYPE-RELATED	coord: 2..123
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 2..123
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 3..36
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 45..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg021924.1	Spg021924.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding