Homology
BLAST of Spg021821 vs. NCBI nr
Match:
XP_023515625.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1376.7 bits (3562), Expect = 0.0e+00
Identity = 675/738 (91.46%), Postives = 710/738 (96.21%), Query Frame = 0
Query: 1 MALSAPSGVLSPTSPSTFHVLPSSDPPYKLLQDHPSLKLLSRCQSIRTLRQIHAQIIKTG 60
MA SAPS VLSPTS PSSDPPY+LLQDHPSLKL+S+C+SIRTLRQIHAQIIKTG
Sbjct: 1 MATSAPSLVLSPTS-------PSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTG 60
Query: 61 LHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEPNLFIWNSMIRGLSMSPSPILALIF 120
LHNTQFALSKLIEFSAVSR+ DISYAVSLFNSIEEPNLFIWNSMIRGLS+S SP+LAL+F
Sbjct: 61 LHNTQFALSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVF 120
Query: 121 FVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDVYIHTSLINMYVQ 180
FVRMIH+GVEPNSYTFPFLLKSCAKLASA EGKQIHA+VLKLG V DV+IHTSLINMY Q
Sbjct: 121 FVRMIHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQ 180
Query: 181 SGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVRDVVSWNAMISGY 240
SGE+N AQLVFDQSNFRDAISFTALIAGY LWG MDRAR+LFDEMPVRDVVSWNAMI+GY
Sbjct: 181 SGEINYAQLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGY 240
Query: 241 AQTGRSQEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
AQTGRS+EALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL
Sbjct: 241 AQTGRSKEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
Query: 301 KLINALIDMYSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFRQMLAS 360
KL+NALIDMYSKCGDLQTA +LFD+MPERDVISWNVMIGGYTHMCSYKEALALFR+MLAS
Sbjct: 301 KLVNALIDMYSKCGDLQTACELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLAS 360
Query: 361 GIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA 420
GIEPTDIT LN+LPSCA LGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNI+AA
Sbjct: 361 GIEPTDITFLNVLPSCACLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIDAA 420
Query: 421 RQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHA 480
RQVF+GMNIKSLASWNAMICGLAMHGQA++A ELFS+MSS GIEPNEITFVGVLSACKHA
Sbjct: 421 RQVFNGMNIKSLASWNAMICGLAMHGQANEALELFSKMSSNGIEPNEITFVGVLSACKHA 480
Query: 481 GLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
G VDLGR FFSSM++DYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS
Sbjct: 481 GFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
Query: 541 LLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGM 600
LLGACRDHGRVELGE VAERLF+LEPDNPGAYVLLSNIYAGAGKWD+VARIRT+LND GM
Sbjct: 541 LLGACRDHGRVELGEIVAERLFKLEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDMGM 600
Query: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDMDE 660
KKVPGCTTIEVDNVVHEFLVGDKVHPQ+E+IYKMLEEVD+QLK FGFVPDTSEVLYDMDE
Sbjct: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQTENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDE 660
Query: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLMSKIFNREIIARD 720
EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCH+ATKL+SKIFNREIIARD
Sbjct: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARD 720
Query: 721 RNRFHHFKDGSCSCNDYW 739
RNRFHHFKDGSCSCNDYW
Sbjct: 721 RNRFHHFKDGSCSCNDYW 731
BLAST of Spg021821 vs. NCBI nr
Match:
XP_004150015.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucumis sativus])
HSP 1 Score: 1375.1 bits (3558), Expect = 0.0e+00
Identity = 675/738 (91.46%), Postives = 710/738 (96.21%), Query Frame = 0
Query: 1 MALSAPSGVLSPTSPSTFHVLPSSDPPYKLLQDHPSLKLLSRCQSIRTLRQIHAQIIKTG 60
MALS+PS +LSP +FHVLPSSDPPY++LQ+HPSLKLLS+CQSIRT +QIHA IIKTG
Sbjct: 1 MALSSPSLLLSP----SFHVLPSSDPPYRVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTG 60
Query: 61 LHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEPNLFIWNSMIRGLSMSPSPILALIF 120
LHNT FALSKLIEFSAVSR GDISYA+SLFNSIEEPNLFIWNSMIRGLSMS SP LAL+F
Sbjct: 61 LHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVF 120
Query: 121 FVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDVYIHTSLINMYVQ 180
FVRMI+SGVEPNSYTFPFLLKSCAKLASAHEGKQIHA+VLKLG V DV+IHTSLINMY Q
Sbjct: 121 FVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQ 180
Query: 181 SGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVRDVVSWNAMISGY 240
SGEMNNAQLVFDQSNFRDAISFTALIAGYALWG MDRARQLFDEMPV+DVVSWNAMI+GY
Sbjct: 181 SGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGY 240
Query: 241 AQTGRSQEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
AQ GRS+EALLLFE+MRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGL SNL
Sbjct: 241 AQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNL 300
Query: 301 KLINALIDMYSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFRQMLAS 360
KL+NALIDMYSKCGDLQTAR+LFDDM ERDVISWNVMIGGYTHMCSYKEALALFR+MLAS
Sbjct: 301 KLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLAS 360
Query: 361 GIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA 420
G+EPT+IT L+ILPSCAHLGAIDLGKWIHAYINKNFNS STSL TSLID+YAKCGNI AA
Sbjct: 361 GVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAA 420
Query: 421 RQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHA 480
RQVFDGM IKSLASWNAMICGLAMHGQAD+AFELFS+MSS GIEPNEITFVG+LSACKHA
Sbjct: 421 RQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHA 480
Query: 481 GLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
GLVDLG+QFFSSMV+DYKISPKSQHYGCMIDLLGRAGLFEEAESL+QNME+KPDGAIWGS
Sbjct: 481 GLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGS 540
Query: 541 LLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGM 600
LLGACRDHGRVELGE VAERLFELEPDNPGAYVLLSNIYAGAGKWD+VARIRTRLNDRGM
Sbjct: 541 LLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGM 600
Query: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDMDE 660
KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIY+MLEEVD+QLK FGFV DTSEVLYDMDE
Sbjct: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDE 660
Query: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLMSKIFNREIIARD 720
EWKEGALSHHSEKLAIAFGLISTKPGTPI IIKNLRVCRNCHSATKL+SKIFNREIIARD
Sbjct: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARD 720
Query: 721 RNRFHHFKDGSCSCNDYW 739
RNRFHHFKDGSCSCNDYW
Sbjct: 721 RNRFHHFKDGSCSCNDYW 734
BLAST of Spg021821 vs. NCBI nr
Match:
KAG6589865.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1374.8 bits (3557), Expect = 0.0e+00
Identity = 673/738 (91.19%), Postives = 710/738 (96.21%), Query Frame = 0
Query: 1 MALSAPSGVLSPTSPSTFHVLPSSDPPYKLLQDHPSLKLLSRCQSIRTLRQIHAQIIKTG 60
MA SAPS VLSPTS PSSDPPY+LLQ+HPSLKL+S+C+SIRTLRQIHAQIIKTG
Sbjct: 1 MATSAPSLVLSPTS-------PSSDPPYRLLQEHPSLKLISKCRSIRTLRQIHAQIIKTG 60
Query: 61 LHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEPNLFIWNSMIRGLSMSPSPILALIF 120
LHNTQFALSKLIEFSAVSR+ DISYAVSLFNSIEEPNLFIWNSMIRGLS+S SP+LAL+F
Sbjct: 61 LHNTQFALSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVF 120
Query: 121 FVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDVYIHTSLINMYVQ 180
FVRMIH+GVEPNSYTFPFLLKSCAKLASA EGKQIHA+VLKLG V DV+IHTSLINMY Q
Sbjct: 121 FVRMIHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQ 180
Query: 181 SGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVRDVVSWNAMISGY 240
SGE+N AQLVFDQSNFRDAISFTALIAGY LWG MDRAR+LFDEMPVRDVVSWNAMI+GY
Sbjct: 181 SGEINYAQLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGY 240
Query: 241 AQTGRSQEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
AQTGRS+EALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL
Sbjct: 241 AQTGRSKEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
Query: 301 KLINALIDMYSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFRQMLAS 360
KL+NALIDMYSKCGDLQTAR+LFD+MPERDVISWNVMIGGYTHMCSYKEALALFR MLAS
Sbjct: 301 KLVNALIDMYSKCGDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFRGMLAS 360
Query: 361 GIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA 420
GIEPTDIT LN+LPSCA LGAID+GKWIHAYINKNFNSASTSLWTSLIDMYAKCGNI+AA
Sbjct: 361 GIEPTDITFLNVLPSCACLGAIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIDAA 420
Query: 421 RQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHA 480
RQVF+GMN KSLASWNAMICGLAMHGQA++A ELFS+MSS GIEPNEITFVGVLSACKHA
Sbjct: 421 RQVFNGMNFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACKHA 480
Query: 481 GLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
G VDLGR FFSSM++DYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNME+KPDGAIWGS
Sbjct: 481 GFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMELKPDGAIWGS 540
Query: 541 LLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGM 600
LLGACR+HGRVELGE VAERLFELEPDNPGAYVLLSNIYAGAGKWD+VARIRT+LND+GM
Sbjct: 541 LLGACREHGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDKGM 600
Query: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDMDE 660
KKVPGCTTIEVDNVVHEFLVGDKVHPQSE+IYKMLEEVD+QLK FGFVPDTSEVLYDMDE
Sbjct: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDE 660
Query: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLMSKIFNREIIARD 720
EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCH+ATKL+SKIFNREIIARD
Sbjct: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARD 720
Query: 721 RNRFHHFKDGSCSCNDYW 739
RNRFHHFKDGSCSCNDYW
Sbjct: 721 RNRFHHFKDGSCSCNDYW 731
BLAST of Spg021821 vs. NCBI nr
Match:
XP_022987625.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita maxima])
HSP 1 Score: 1374.0 bits (3555), Expect = 0.0e+00
Identity = 673/738 (91.19%), Postives = 709/738 (96.07%), Query Frame = 0
Query: 1 MALSAPSGVLSPTSPSTFHVLPSSDPPYKLLQDHPSLKLLSRCQSIRTLRQIHAQIIKTG 60
MA SAPS VLSPTS PSSDPPY+LLQDHPSLKL+S+C+SIRTLRQIHAQIIKTG
Sbjct: 1 MATSAPSLVLSPTS-------PSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTG 60
Query: 61 LHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEPNLFIWNSMIRGLSMSPSPILALIF 120
LHNTQFALSKLIEFSAVSR+ DISYAVSLFNSIEEPNLFIWNSMIRGLS+S SP+LAL+F
Sbjct: 61 LHNTQFALSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVF 120
Query: 121 FVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDVYIHTSLINMYVQ 180
F RMIH+GVEPNSYTFPFLLKSCA+LASA EGKQIHA+VLKLG V DV+IHTSLINMY Q
Sbjct: 121 FARMIHAGVEPNSYTFPFLLKSCARLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQ 180
Query: 181 SGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVRDVVSWNAMISGY 240
SGE+N AQLVFDQSNFRDAISFTALIAGY LWG MDRAR+LFDEMPVRDVVSWNAMI+GY
Sbjct: 181 SGEINYAQLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGY 240
Query: 241 AQTGRSQEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
AQTGRS+EALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL
Sbjct: 241 AQTGRSKEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
Query: 301 KLINALIDMYSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFRQMLAS 360
KL+NALIDMYSKCG LQTAR+LFD+MPERDVISWNVMIGGYTHMCSYKEALALFR+MLAS
Sbjct: 301 KLVNALIDMYSKCGALQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLAS 360
Query: 361 GIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA 420
GIEPTDIT LN+LPSCA LGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA
Sbjct: 361 GIEPTDITFLNVLPSCACLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA 420
Query: 421 RQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHA 480
RQVF+GMNIKSLASWNAMICGLAMHGQA++A ELFS+++S GIEPNEITFVGVLSACKHA
Sbjct: 421 RQVFNGMNIKSLASWNAMICGLAMHGQANEALELFSKLTSDGIEPNEITFVGVLSACKHA 480
Query: 481 GLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
G VDLGR FFSSM++DYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS
Sbjct: 481 GFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
Query: 541 LLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGM 600
LLGACRDHGRVELGE VAERLFELEPDNPGAYVLLSNIYAGAGKWD+VA IRT+LND+GM
Sbjct: 541 LLGACRDHGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVATIRTKLNDKGM 600
Query: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDMDE 660
KKVPGCTTIEVDNVVHEFLVGDKVHPQSE+IYKMLEEVD+QLK FGFVPDTSEVLYDMDE
Sbjct: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDE 660
Query: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLMSKIFNREIIARD 720
EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCH+ATKL+SKIFNREIIARD
Sbjct: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARD 720
Query: 721 RNRFHHFKDGSCSCNDYW 739
RNRFHHFKDGSCSCNDYW
Sbjct: 721 RNRFHHFKDGSCSCNDYW 731
BLAST of Spg021821 vs. NCBI nr
Match:
XP_022961045.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1373.6 bits (3554), Expect = 0.0e+00
Identity = 674/738 (91.33%), Postives = 709/738 (96.07%), Query Frame = 0
Query: 1 MALSAPSGVLSPTSPSTFHVLPSSDPPYKLLQDHPSLKLLSRCQSIRTLRQIHAQIIKTG 60
MA SAPS VLSPTS PSSDPPY+LLQDHPSLKL+S+C+SIRTLRQIHAQIIKTG
Sbjct: 1 MATSAPSLVLSPTS-------PSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTG 60
Query: 61 LHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEPNLFIWNSMIRGLSMSPSPILALIF 120
LHNTQFALSKLIEFSAVSR+ DISYAVSLFNSIEEPNLFIWNSMIRGLS+S SP+LAL+F
Sbjct: 61 LHNTQFALSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVF 120
Query: 121 FVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDVYIHTSLINMYVQ 180
FVRMIH+GVEPNSYTFPFLLKSCAKLASA EGKQIHA+VLKLG V DV+IHTSLINMY Q
Sbjct: 121 FVRMIHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQ 180
Query: 181 SGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVRDVVSWNAMISGY 240
SGE+N AQLVFDQSNFRDAISFTALIAGY LWG MDRAR+LFDEMPVRDVVSWNAMI+GY
Sbjct: 181 SGEINYAQLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGY 240
Query: 241 AQTGRSQEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
AQTGRS+EALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGL SNL
Sbjct: 241 AQTGRSKEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNL 300
Query: 301 KLINALIDMYSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFRQMLAS 360
KL+NALIDMYSKCGDLQTAR+LFD+MPERDVISWNVMIGGYTHMCSYKEALALFR+MLAS
Sbjct: 301 KLVNALIDMYSKCGDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLAS 360
Query: 361 GIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA 420
GIEPTDIT LN+LPSCA LGAID+GKWIHAYINKNFNSASTSLWTSLIDMYAKCGNI+AA
Sbjct: 361 GIEPTDITFLNVLPSCACLGAIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIDAA 420
Query: 421 RQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHA 480
RQVF+GMN KSLASWNAMICGLAMHGQA++A ELFS+MSS GIEPNEITFVGVLSACKHA
Sbjct: 421 RQVFNGMNFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACKHA 480
Query: 481 GLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
G VDLGR FFSSM++DYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS
Sbjct: 481 GFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
Query: 541 LLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGM 600
LLGACRDHGRVELGE VAERLFELEPDNPGAYVLLSNIYAGAGKWD+VARIRT+LND+GM
Sbjct: 541 LLGACRDHGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDKGM 600
Query: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDMDE 660
KKVPGCTTIEVDNVVHEFLVGDKVH QSE+IYKMLEEVD+QLK FGFVPDTSEVLYDMDE
Sbjct: 601 KKVPGCTTIEVDNVVHEFLVGDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDE 660
Query: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLMSKIFNREIIARD 720
EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCH+ATKL+SKIFNREIIARD
Sbjct: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARD 720
Query: 721 RNRFHHFKDGSCSCNDYW 739
RNRFHHFKDGSCSCNDYW
Sbjct: 721 RNRFHHFKDGSCSCNDYW 731
BLAST of Spg021821 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 995.7 bits (2573), Expect = 2.7e-289
Identity = 470/731 (64.30%), Postives = 597/731 (81.67%), Query Frame = 0
Query: 12 PTSPSTFHVLP-SSDPPYKLLQDHPSLKLLSRCQSIRTLRQIHAQIIKTGLHNTQFALSK 71
P+S FH LP SSDPPY +++HPSL LL C+++++LR IHAQ+IK GLHNT +ALSK
Sbjct: 11 PSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSK 70
Query: 72 LIEFSAVS-RFGDISYAVSLFNSIEEPNLFIWNSMIRGLSMSPSPILALIFFVRMIHSGV 131
LIEF +S F + YA+S+F +I+EPNL IWN+M RG ++S P+ AL +V MI G+
Sbjct: 71 LIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGL 130
Query: 132 EPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDVYIHTSLINMYVQSGEMNNAQL 191
PNSYTFPF+LKSCAK + EG+QIH +VLKLG D+Y+HTSLI+MYVQ+G + +A
Sbjct: 131 LPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHK 190
Query: 192 VFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVRDVVSWNAMISGYAQTGRSQEA 251
VFD+S RD +S+TALI GYA G ++ A++LFDE+PV+DVVSWNAMISGYA+TG +EA
Sbjct: 191 VFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEA 250
Query: 252 LLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNLKLINALIDM 311
L LF++M K NV P+EST+V+V+SACAQS +++LG + WI+D G SNLK++NALID+
Sbjct: 251 LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDL 310
Query: 312 YSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFRQMLASGIEPTDITL 371
YSKCG+L+TA LF+ +P +DVISWN +IGGYTHM YKEAL LF++ML SG P D+T+
Sbjct: 311 YSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370
Query: 372 LNILPSCAHLGAIDLGKWIHAYINKNFNSA--STSLWTSLIDMYAKCGNIEAARQVFDGM 431
L+ILP+CAHLGAID+G+WIH YI+K ++SL TSLIDMYAKCG+IEAA QVF+ +
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 432 NIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHAGLVDLGR 491
KSL+SWNAMI G AMHG+AD +F+LFS+M GI+P++ITFVG+LSAC H+G++DLGR
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Query: 492 QFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLGACRD 551
F +M +DYK++PK +HYGCMIDLLG +GLF+EAE +I MEM+PDG IW SLL AC+
Sbjct: 491 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 550
Query: 552 HGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGMKKVPGCT 611
HG VELGES AE L ++EP+NPG+YVLLSNIYA AG+W+EVA+ R LND+GMKKVPGC+
Sbjct: 551 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 610
Query: 612 TIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDMDEEWKEGAL 671
+IE+D+VVHEF++GDK HP++ +IY MLEE++ L+ GFVPDTSEVL +M+EEWKEGAL
Sbjct: 611 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGAL 670
Query: 672 SHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLMSKIFNREIIARDRNRFHHF 731
HHSEKLAIAFGLISTKPGT +TI+KNLRVCRNCH ATKL+SKI+ REIIARDR RFHHF
Sbjct: 671 RHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHF 730
Query: 732 KDGSCSCNDYW 739
+DG CSCNDYW
Sbjct: 731 RDGVCSCNDYW 741
BLAST of Spg021821 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 607.4 bits (1565), Expect = 2.1e-172
Identity = 297/736 (40.35%), Postives = 451/736 (61.28%), Query Frame = 0
Query: 37 LKLLSRCQSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEP 96
+ L+ RC S+R L+Q H +I+TG + ++ SKL +A+S F + YA +F+ I +P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 97 NLFIWNSMIRGLSMSPSPILALIFFVRMI-HSGVEPNSYTFPFLLKSCAKLASAHEGKQI 156
N F WN++IR + P P+L++ F+ M+ S PN YTFPFL+K+ A+++S G+ +
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 157 HAYVLKLGLVFDVYIHTSLINMYVQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSM 216
H +K + DV++ SLI+ Y G+ +
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGD-------------------------------L 213
Query: 217 DRARQLFDEMPVRDVVSWNAMISGYAQTGRSQEALLLFEEMRKANVPPNESTIVSVLSAC 276
D A ++F + +DVVSWN+MI+G+ Q G +AL LF++M +V + T+V VLSAC
Sbjct: 214 DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 273
Query: 277 AQSNALDLGNSMRSWIEDRGLRSNLKLINALIDMYSKCGDLQTARQLFD----------- 336
A+ L+ G + S+IE+ + NL L NA++DMY+KCG ++ A++LFD
Sbjct: 274 AKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 333
Query: 337 --------------------DMPERDVISWNVMIGGYTHMCSYKEALALFRQM-LASGIE 396
MP++D+++WN +I Y EAL +F ++ L ++
Sbjct: 334 TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 393
Query: 397 PTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAARQV 456
ITL++ L +CA +GA++LG+WIH+YI K+ + + ++LI MY+KCG++E +R+V
Sbjct: 394 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 453
Query: 457 FDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHAGLV 516
F+ + + + W+AMI GLAMHG ++A ++F +M ++PN +TF V AC H GLV
Sbjct: 454 FNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 513
Query: 517 DLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLG 576
D F M +Y I P+ +HY C++D+LGR+G E+A I+ M + P ++WG+LLG
Sbjct: 514 DEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLG 573
Query: 577 ACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGMKKV 636
AC+ H + L E RL ELEP N GA+VLLSNIYA GKW+ V+ +R + G+KK
Sbjct: 574 ACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKE 633
Query: 637 PGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDM-DEEW 696
PGC++IE+D ++HEFL GD HP SE +Y L EV ++LK+ G+ P+ S+VL + +EE
Sbjct: 634 PGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEM 693
Query: 697 KEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLMSKIFNREIIARDRN 739
KE +L+ HSEKLAI +GLIST+ I +IKNLRVC +CHS KL+S++++REII RDR
Sbjct: 694 KEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRY 738
BLAST of Spg021821 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 575.1 bits (1481), Expect = 1.1e-162
Identity = 296/804 (36.82%), Postives = 456/804 (56.72%), Query Frame = 0
Query: 40 LSRCQSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSA-VSRFGDISYAVSLF-NSIEEPN 99
L C++I L+ H + K GL N ++KL+ S + +S+A +F NS
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 100 LFIWNSMIRGLSMSPSPILALIFFVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHA 159
F++NS+IRG + S A++ F+RM++SG+ P+ YTFPF L +CAK + G QIH
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 160 YVLKLGLVFDVYIHTSLINMYVQSGEMNNAQLVFDQSNFRDAISFTALIAGYA------- 219
++K+G D+++ SL++ Y + GE+++A+ VFD+ + R+ +S+T++I GYA
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 220 ------------------------------------------------------------ 279
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 280 ----LWGSMDRARQLFDEMPVRDVVSWNAMISGYAQTGRSQEALLLFEEMRKANVPPNES 339
++D A++LFDE ++ NAM S Y + G ++EAL +F M + V P+
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 340 TIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNLKLINALIDMYSKC------------- 399
+++S +S+C+Q + G S ++ G S + NALIDMY KC
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 400 ------------------GDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFR 459
G++ A + F+ MPE++++SWN +I G ++EA+ +F
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 460 QMLA-SGIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKC 519
M + G+ +T+++I +C HLGA+DL KWI+ YI KN L T+L+DM+++C
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 520 GNIEAARQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVL 579
G+ E+A +F+ + + +++W A I +AM G A++A ELF M G++P+ + FVG L
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 580 SACKHAGLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPD 639
+AC H GLV G++ F SM+K + +SP+ HYGCM+DLLGRAGL EEA LI++M M+P+
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 640 GAIWGSLLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTR 699
IW SLL ACR G VE+ AE++ L P+ G+YVLLSN+YA AG+W+++A++R
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 700 LNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEV 739
+ ++G++K PG ++I++ HEF GD+ HP+ +I ML+EV ++ G VPD S V
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
BLAST of Spg021821 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 570.5 bits (1469), Expect = 2.8e-161
Identity = 283/690 (41.01%), Postives = 427/690 (61.88%), Query Frame = 0
Query: 49 LRQIHAQIIKTGLHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEPNLFIWNSMIRGL 108
L+QIHA+++ GL + F ++KLI A S FGDI++A +F+ + P +F WN++IRG
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 96
Query: 109 SMSPSPILALIFFVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDV 168
S + AL+ + M + V P+S+TFP LLK+C+ L+ G+ +HA V +LG DV
Sbjct: 97 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 156
Query: 169 YIHTSLINMYVQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVR 228
++ LI +Y + + +A+ VF+ +P R
Sbjct: 157 FVQNGLIALYAKCRRLGSARTVFEGL-----------------------------PLPER 216
Query: 229 DVVSWNAMISGYAQTGRSQEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMR 288
+VSW A++S YAQ G EAL +F +MRK +V P+ +VSVL+A L G S+
Sbjct: 217 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 276
Query: 289 SWIEDRGLRSNLKLINALIDMYSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYK 348
+ + GL L+ +L MY+KCG + TA+ LFD M ++I WN MI GY +
Sbjct: 277 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 336
Query: 349 EALALFRQMLASGIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLI 408
EA+ +F +M+ + P I++ + + +CA +G+++ + ++ Y+ ++ + ++LI
Sbjct: 337 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 396
Query: 409 DMYAKCGNIEAARQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEI 468
DM+AKCG++E AR VFD + + W+AMI G +HG+A +A L+ M G+ PN++
Sbjct: 397 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 456
Query: 469 TFVGVLSACKHAGLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQN 528
TF+G+L AC H+G+V G FF+ M D+KI+P+ QHY C+IDLLGRAG ++A +I+
Sbjct: 457 TFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 516
Query: 529 MEMKPDGAIWGSLLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEV 588
M ++P +WG+LL AC+ H VELGE A++LF ++P N G YV LSN+YA A WD V
Sbjct: 517 MPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRV 576
Query: 589 ARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFV 648
A +R R+ ++G+ K GC+ +EV + F VGDK HP+ E+I + +E ++ +LK GFV
Sbjct: 577 AEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 636
Query: 649 PDTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLM 708
+ L+D+++E E L HSE++AIA+GLIST GTP+ I KNLR C NCH+ATKL+
Sbjct: 637 ANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLI 694
Query: 709 SKIFNREIIARDRNRFHHFKDGSCSCNDYW 739
SK+ +REI+ RD NRFHHFKDG CSC DYW
Sbjct: 697 SKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
BLAST of Spg021821 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 566.6 bits (1459), Expect = 4.1e-160
Identity = 306/755 (40.53%), Postives = 428/755 (56.69%), Query Frame = 0
Query: 48 TLRQIHAQIIKTGLHNTQFALSKLIE-----------------------------FSAVS 107
T + +H ++IK+GL + + ++ L+ SA S
Sbjct: 32 TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91
Query: 108 RFGDISYAVSLFNSIEEPNLFIWNSMIRGLSMSPSPILALIFFVRMIHSGVEPNSYTFPF 167
+ GD+ F+ + + + W +MI G A+ M+ G+EP +T
Sbjct: 92 KRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151
Query: 168 LLKSCAKLASAHEGKQIHAYVLKLGLVFDVYIHTSLINMYVQSGEMNNAQLVFDQSNFRD 227
+L S A GK++H++++KLGL +V + SL+NMY + G+ A+ VFD+ RD
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 228 AISFTALIAGYALWGSMDRARQLFDEMPVRDVVSWNAMISGYAQTGRSQEALLLFEEM-R 287
S+ A+IA + G MD A F++M RD+V+WN+MISG+ Q G AL +F +M R
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 288 KANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNLKLINALIDMYSKCGDLQ 347
+ + P+ T+ SVLSACA L +G + S I G + ++NALI MYS+CG ++
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 348 TARQL---------------------------------FDDMPERDVISWNVMIGGYTHM 407
TAR+L F + +RDV++W MI GY
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 408 CSYKEALALFRQMLASGIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLW 467
SY EA+ LFR M+ G P TL +L + L ++ GK IH K+ S S+
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 468 TSLIDMYAKCGNIEAARQVFDGMNI-KSLASWNAMICGLAMHGQADQAFELFSQMSSYGI 527
+LI MYAK GNI +A + FD + + SW +MI LA HG A++A ELF M G+
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 528 EPNEITFVGVLSACKHAGLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAE 587
P+ IT+VGV SAC HAGLV+ GRQ+F M KI P HY CM+DL GRAGL +EA+
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 588 SLIQNMEMKPDGAIWGSLLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAG 647
I+ M ++PD WGSLL ACR H ++LG+ AERL LEP+N GAY L+N+Y+ G
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 648 KWDEVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLK 707
KW+E A+IR + D +KK G + IEV + VH F V D HP+ +IY ++++ ++K
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Query: 708 AFGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHS 739
G+VPDT+ VL+D++EE KE L HHSEKLAIAFGLIST T + I+KNLRVC +CH+
Sbjct: 692 KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHT 751
BLAST of Spg021821 vs. ExPASy TrEMBL
Match:
A0A0A0LU28 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G306800 PE=3 SV=1)
HSP 1 Score: 1375.1 bits (3558), Expect = 0.0e+00
Identity = 675/738 (91.46%), Postives = 710/738 (96.21%), Query Frame = 0
Query: 1 MALSAPSGVLSPTSPSTFHVLPSSDPPYKLLQDHPSLKLLSRCQSIRTLRQIHAQIIKTG 60
MALS+PS +LSP +FHVLPSSDPPY++LQ+HPSLKLLS+CQSIRT +QIHA IIKTG
Sbjct: 1 MALSSPSLLLSP----SFHVLPSSDPPYRVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTG 60
Query: 61 LHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEPNLFIWNSMIRGLSMSPSPILALIF 120
LHNT FALSKLIEFSAVSR GDISYA+SLFNSIEEPNLFIWNSMIRGLSMS SP LAL+F
Sbjct: 61 LHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVF 120
Query: 121 FVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDVYIHTSLINMYVQ 180
FVRMI+SGVEPNSYTFPFLLKSCAKLASAHEGKQIHA+VLKLG V DV+IHTSLINMY Q
Sbjct: 121 FVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQ 180
Query: 181 SGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVRDVVSWNAMISGY 240
SGEMNNAQLVFDQSNFRDAISFTALIAGYALWG MDRARQLFDEMPV+DVVSWNAMI+GY
Sbjct: 181 SGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGY 240
Query: 241 AQTGRSQEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
AQ GRS+EALLLFE+MRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGL SNL
Sbjct: 241 AQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNL 300
Query: 301 KLINALIDMYSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFRQMLAS 360
KL+NALIDMYSKCGDLQTAR+LFDDM ERDVISWNVMIGGYTHMCSYKEALALFR+MLAS
Sbjct: 301 KLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLAS 360
Query: 361 GIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA 420
G+EPT+IT L+ILPSCAHLGAIDLGKWIHAYINKNFNS STSL TSLID+YAKCGNI AA
Sbjct: 361 GVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAA 420
Query: 421 RQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHA 480
RQVFDGM IKSLASWNAMICGLAMHGQAD+AFELFS+MSS GIEPNEITFVG+LSACKHA
Sbjct: 421 RQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHA 480
Query: 481 GLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
GLVDLG+QFFSSMV+DYKISPKSQHYGCMIDLLGRAGLFEEAESL+QNME+KPDGAIWGS
Sbjct: 481 GLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGS 540
Query: 541 LLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGM 600
LLGACRDHGRVELGE VAERLFELEPDNPGAYVLLSNIYAGAGKWD+VARIRTRLNDRGM
Sbjct: 541 LLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGM 600
Query: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDMDE 660
KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIY+MLEEVD+QLK FGFV DTSEVLYDMDE
Sbjct: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDE 660
Query: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLMSKIFNREIIARD 720
EWKEGALSHHSEKLAIAFGLISTKPGTPI IIKNLRVCRNCHSATKL+SKIFNREIIARD
Sbjct: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARD 720
Query: 721 RNRFHHFKDGSCSCNDYW 739
RNRFHHFKDGSCSCNDYW
Sbjct: 721 RNRFHHFKDGSCSCNDYW 734
BLAST of Spg021821 vs. ExPASy TrEMBL
Match:
A0A6J1JHE6 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111485125 PE=3 SV=1)
HSP 1 Score: 1374.0 bits (3555), Expect = 0.0e+00
Identity = 673/738 (91.19%), Postives = 709/738 (96.07%), Query Frame = 0
Query: 1 MALSAPSGVLSPTSPSTFHVLPSSDPPYKLLQDHPSLKLLSRCQSIRTLRQIHAQIIKTG 60
MA SAPS VLSPTS PSSDPPY+LLQDHPSLKL+S+C+SIRTLRQIHAQIIKTG
Sbjct: 1 MATSAPSLVLSPTS-------PSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTG 60
Query: 61 LHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEPNLFIWNSMIRGLSMSPSPILALIF 120
LHNTQFALSKLIEFSAVSR+ DISYAVSLFNSIEEPNLFIWNSMIRGLS+S SP+LAL+F
Sbjct: 61 LHNTQFALSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVF 120
Query: 121 FVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDVYIHTSLINMYVQ 180
F RMIH+GVEPNSYTFPFLLKSCA+LASA EGKQIHA+VLKLG V DV+IHTSLINMY Q
Sbjct: 121 FARMIHAGVEPNSYTFPFLLKSCARLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQ 180
Query: 181 SGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVRDVVSWNAMISGY 240
SGE+N AQLVFDQSNFRDAISFTALIAGY LWG MDRAR+LFDEMPVRDVVSWNAMI+GY
Sbjct: 181 SGEINYAQLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGY 240
Query: 241 AQTGRSQEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
AQTGRS+EALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL
Sbjct: 241 AQTGRSKEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
Query: 301 KLINALIDMYSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFRQMLAS 360
KL+NALIDMYSKCG LQTAR+LFD+MPERDVISWNVMIGGYTHMCSYKEALALFR+MLAS
Sbjct: 301 KLVNALIDMYSKCGALQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLAS 360
Query: 361 GIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA 420
GIEPTDIT LN+LPSCA LGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA
Sbjct: 361 GIEPTDITFLNVLPSCACLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA 420
Query: 421 RQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHA 480
RQVF+GMNIKSLASWNAMICGLAMHGQA++A ELFS+++S GIEPNEITFVGVLSACKHA
Sbjct: 421 RQVFNGMNIKSLASWNAMICGLAMHGQANEALELFSKLTSDGIEPNEITFVGVLSACKHA 480
Query: 481 GLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
G VDLGR FFSSM++DYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS
Sbjct: 481 GFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
Query: 541 LLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGM 600
LLGACRDHGRVELGE VAERLFELEPDNPGAYVLLSNIYAGAGKWD+VA IRT+LND+GM
Sbjct: 541 LLGACRDHGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVATIRTKLNDKGM 600
Query: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDMDE 660
KKVPGCTTIEVDNVVHEFLVGDKVHPQSE+IYKMLEEVD+QLK FGFVPDTSEVLYDMDE
Sbjct: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDE 660
Query: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLMSKIFNREIIARD 720
EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCH+ATKL+SKIFNREIIARD
Sbjct: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARD 720
Query: 721 RNRFHHFKDGSCSCNDYW 739
RNRFHHFKDGSCSCNDYW
Sbjct: 721 RNRFHHFKDGSCSCNDYW 731
BLAST of Spg021821 vs. ExPASy TrEMBL
Match:
A0A5A7TTJ1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00470 PE=3 SV=1)
HSP 1 Score: 1373.6 bits (3554), Expect = 0.0e+00
Identity = 672/738 (91.06%), Postives = 708/738 (95.93%), Query Frame = 0
Query: 1 MALSAPSGVLSPTSPSTFHVLPSSDPPYKLLQDHPSLKLLSRCQSIRTLRQIHAQIIKTG 60
MALS+PS +LSP +FHVLPSSDPPY++LQ+HP+LKLLS+CQ+IRT +QIHA IIKTG
Sbjct: 1 MALSSPSLLLSP----SFHVLPSSDPPYRVLQEHPALKLLSKCQNIRTFKQIHAHIIKTG 60
Query: 61 LHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEPNLFIWNSMIRGLSMSPSPILALIF 120
LHNT FALSKLIEFSAVSR GDISYA+SLF+SIE+PNLFIWNSMIRGLSMS SP+LAL+F
Sbjct: 61 LHNTHFALSKLIEFSAVSRSGDISYAISLFSSIEDPNLFIWNSMIRGLSMSLSPVLALVF 120
Query: 121 FVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDVYIHTSLINMYVQ 180
FVRMI+SGVEPNSYTFPFLLKSCAKLASA EGKQIHA+VLKLG V DV+IHTSLINMY Q
Sbjct: 121 FVRMIYSGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQ 180
Query: 181 SGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVRDVVSWNAMISGY 240
SGEMNNAQL+FDQSNFRDAISFTALIAGYALWG MDRARQLFDEMPV+DVVSWNAMI+GY
Sbjct: 181 SGEMNNAQLIFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGY 240
Query: 241 AQTGRSQEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
AQ GRS+EALLLFE+MRK NVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL
Sbjct: 241 AQMGRSKEALLLFEDMRKENVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
Query: 301 KLINALIDMYSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFRQMLAS 360
KL+NALIDMYSKCGDL TAR+LFDDMPERDVISWNVMIGGYTHMCSYKEALALFR+MLAS
Sbjct: 301 KLVNALIDMYSKCGDLPTARELFDDMPERDVISWNVMIGGYTHMCSYKEALALFREMLAS 360
Query: 361 GIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA 420
G+EPT+IT L+ILPSCAHLGAIDLGKWIHAYINKNFNS STSL TSLID+YAKCGNI AA
Sbjct: 361 GVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAA 420
Query: 421 RQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHA 480
RQVFDGMNIKSLASWNAMICGLAMHGQAD+AFELFS+MSS GIEPNEITFVGVLSACKHA
Sbjct: 421 RQVFDGMNIKSLASWNAMICGLAMHGQADEAFELFSKMSSDGIEPNEITFVGVLSACKHA 480
Query: 481 GLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
GLVDLG Q FSSMV+DYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNME+KPDGAIWGS
Sbjct: 481 GLVDLGHQIFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEVKPDGAIWGS 540
Query: 541 LLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGM 600
LLGACRDHGRVELGE VAERLFELEPDNPGAYVLLSNIYAGAGKWD+VARIRTRLNDRGM
Sbjct: 541 LLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGM 600
Query: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDMDE 660
KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLK FGFV DTSEVLYDMDE
Sbjct: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKVFGFVADTSEVLYDMDE 660
Query: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLMSKIFNREIIARD 720
EWKEG LSHHSEKLAIAFGLISTKPGTPI IIKNLRVCRNCHSATKL+SKIFNREIIARD
Sbjct: 661 EWKEGTLSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARD 720
Query: 721 RNRFHHFKDGSCSCNDYW 739
RNRFHHFKDGSCSCNDYW
Sbjct: 721 RNRFHHFKDGSCSCNDYW 734
BLAST of Spg021821 vs. ExPASy TrEMBL
Match:
A0A6J1HAU9 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111461670 PE=3 SV=1)
HSP 1 Score: 1373.6 bits (3554), Expect = 0.0e+00
Identity = 674/738 (91.33%), Postives = 709/738 (96.07%), Query Frame = 0
Query: 1 MALSAPSGVLSPTSPSTFHVLPSSDPPYKLLQDHPSLKLLSRCQSIRTLRQIHAQIIKTG 60
MA SAPS VLSPTS PSSDPPY+LLQDHPSLKL+S+C+SIRTLRQIHAQIIKTG
Sbjct: 1 MATSAPSLVLSPTS-------PSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTG 60
Query: 61 LHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEPNLFIWNSMIRGLSMSPSPILALIF 120
LHNTQFALSKLIEFSAVSR+ DISYAVSLFNSIEEPNLFIWNSMIRGLS+S SP+LAL+F
Sbjct: 61 LHNTQFALSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVF 120
Query: 121 FVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDVYIHTSLINMYVQ 180
FVRMIH+GVEPNSYTFPFLLKSCAKLASA EGKQIHA+VLKLG V DV+IHTSLINMY Q
Sbjct: 121 FVRMIHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQ 180
Query: 181 SGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVRDVVSWNAMISGY 240
SGE+N AQLVFDQSNFRDAISFTALIAGY LWG MDRAR+LFDEMPVRDVVSWNAMI+GY
Sbjct: 181 SGEINYAQLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGY 240
Query: 241 AQTGRSQEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
AQTGRS+EALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGL SNL
Sbjct: 241 AQTGRSKEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNL 300
Query: 301 KLINALIDMYSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFRQMLAS 360
KL+NALIDMYSKCGDLQTAR+LFD+MPERDVISWNVMIGGYTHMCSYKEALALFR+MLAS
Sbjct: 301 KLVNALIDMYSKCGDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLAS 360
Query: 361 GIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA 420
GIEPTDIT LN+LPSCA LGAID+GKWIHAYINKNFNSASTSLWTSLIDMYAKCGNI+AA
Sbjct: 361 GIEPTDITFLNVLPSCACLGAIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIDAA 420
Query: 421 RQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHA 480
RQVF+GMN KSLASWNAMICGLAMHGQA++A ELFS+MSS GIEPNEITFVGVLSACKHA
Sbjct: 421 RQVFNGMNFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACKHA 480
Query: 481 GLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
G VDLGR FFSSM++DYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS
Sbjct: 481 GFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
Query: 541 LLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGM 600
LLGACRDHGRVELGE VAERLFELEPDNPGAYVLLSNIYAGAGKWD+VARIRT+LND+GM
Sbjct: 541 LLGACRDHGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDKGM 600
Query: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDMDE 660
KKVPGCTTIEVDNVVHEFLVGDKVH QSE+IYKMLEEVD+QLK FGFVPDTSEVLYDMDE
Sbjct: 601 KKVPGCTTIEVDNVVHEFLVGDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDE 660
Query: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLMSKIFNREIIARD 720
EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCH+ATKL+SKIFNREIIARD
Sbjct: 661 EWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARD 720
Query: 721 RNRFHHFKDGSCSCNDYW 739
RNRFHHFKDGSCSCNDYW
Sbjct: 721 RNRFHHFKDGSCSCNDYW 731
BLAST of Spg021821 vs. ExPASy TrEMBL
Match:
A0A1S3CMX0 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502738 PE=3 SV=1)
HSP 1 Score: 1263.1 bits (3267), Expect = 0.0e+00
Identity = 621/685 (90.66%), Postives = 656/685 (95.77%), Query Frame = 0
Query: 1 MALSAPSGVLSPTSPSTFHVLPSSDPPYKLLQDHPSLKLLSRCQSIRTLRQIHAQIIKTG 60
MALS+PS +LSP +FHVLPSSDPPY++LQ+HP+LKLLS+CQ+IRT +QIHA IIKTG
Sbjct: 1 MALSSPSLLLSP----SFHVLPSSDPPYRVLQEHPALKLLSKCQNIRTFKQIHAHIIKTG 60
Query: 61 LHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEPNLFIWNSMIRGLSMSPSPILALIF 120
LHNT FALSKLIEFSAVSR GDISYA+SLF+SIE+PNLFIWNSMIRGLSMS SP+LAL+F
Sbjct: 61 LHNTHFALSKLIEFSAVSRSGDISYAISLFSSIEDPNLFIWNSMIRGLSMSLSPVLALVF 120
Query: 121 FVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDVYIHTSLINMYVQ 180
FVRMI+SGVEPNSYTFPFLLKSCAKLASA EGKQIHA+VLKLG V DV+IHTSLINMY Q
Sbjct: 121 FVRMIYSGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQ 180
Query: 181 SGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVRDVVSWNAMISGY 240
SGEMNNAQL+FDQSNFRDAISFTALIAGYALWG MDRARQLFDEMPV+DVVSWNAMI+GY
Sbjct: 181 SGEMNNAQLIFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGY 240
Query: 241 AQTGRSQEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
AQ GRS+EALLLFE+MRK NVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL
Sbjct: 241 AQMGRSKEALLLFEDMRKENVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNL 300
Query: 301 KLINALIDMYSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFRQMLAS 360
KL+NALIDMYSKCGDL TAR+LFDDMPERDVISWNVMIGGYTHMCSYKEALALFR+MLAS
Sbjct: 301 KLVNALIDMYSKCGDLPTARELFDDMPERDVISWNVMIGGYTHMCSYKEALALFREMLAS 360
Query: 361 GIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAA 420
G+EPT+IT L+ILPSCAHLGAIDLGKWIHAYINKNFNS STSL TSLID+YAKCGNI AA
Sbjct: 361 GVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAA 420
Query: 421 RQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHA 480
RQVFDGMNIKSLASWNAMICGLAMHGQAD+AFELFS+MSS GIEPNEITFVGVLSACKHA
Sbjct: 421 RQVFDGMNIKSLASWNAMICGLAMHGQADEAFELFSKMSSDGIEPNEITFVGVLSACKHA 480
Query: 481 GLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGS 540
GLVDLG Q FSSMV+DYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNME+KPDGAIWGS
Sbjct: 481 GLVDLGHQIFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEVKPDGAIWGS 540
Query: 541 LLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGM 600
LLGACRDHGRVELGE VAERLFELEPDNPGAYVLLSNIYAGAGKWD+VARIRTRLNDRGM
Sbjct: 541 LLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGM 600
Query: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDMDE 660
KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLK FGFV DTSEVLYDMDE
Sbjct: 601 KKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKVFGFVADTSEVLYDMDE 660
Query: 661 EWKEGALSHHSEKLAIAFGLISTKP 686
EWKEG LSHHSEKLAIAFGLISTKP
Sbjct: 661 EWKEGTLSHHSEKLAIAFGLISTKP 681
BLAST of Spg021821 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 995.7 bits (2573), Expect = 1.9e-290
Identity = 470/731 (64.30%), Postives = 597/731 (81.67%), Query Frame = 0
Query: 12 PTSPSTFHVLP-SSDPPYKLLQDHPSLKLLSRCQSIRTLRQIHAQIIKTGLHNTQFALSK 71
P+S FH LP SSDPPY +++HPSL LL C+++++LR IHAQ+IK GLHNT +ALSK
Sbjct: 11 PSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSK 70
Query: 72 LIEFSAVS-RFGDISYAVSLFNSIEEPNLFIWNSMIRGLSMSPSPILALIFFVRMIHSGV 131
LIEF +S F + YA+S+F +I+EPNL IWN+M RG ++S P+ AL +V MI G+
Sbjct: 71 LIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGL 130
Query: 132 EPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDVYIHTSLINMYVQSGEMNNAQL 191
PNSYTFPF+LKSCAK + EG+QIH +VLKLG D+Y+HTSLI+MYVQ+G + +A
Sbjct: 131 LPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHK 190
Query: 192 VFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVRDVVSWNAMISGYAQTGRSQEA 251
VFD+S RD +S+TALI GYA G ++ A++LFDE+PV+DVVSWNAMISGYA+TG +EA
Sbjct: 191 VFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEA 250
Query: 252 LLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNLKLINALIDM 311
L LF++M K NV P+EST+V+V+SACAQS +++LG + WI+D G SNLK++NALID+
Sbjct: 251 LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDL 310
Query: 312 YSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFRQMLASGIEPTDITL 371
YSKCG+L+TA LF+ +P +DVISWN +IGGYTHM YKEAL LF++ML SG P D+T+
Sbjct: 311 YSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370
Query: 372 LNILPSCAHLGAIDLGKWIHAYINKNFNSA--STSLWTSLIDMYAKCGNIEAARQVFDGM 431
L+ILP+CAHLGAID+G+WIH YI+K ++SL TSLIDMYAKCG+IEAA QVF+ +
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 432 NIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHAGLVDLGR 491
KSL+SWNAMI G AMHG+AD +F+LFS+M GI+P++ITFVG+LSAC H+G++DLGR
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Query: 492 QFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLGACRD 551
F +M +DYK++PK +HYGCMIDLLG +GLF+EAE +I MEM+PDG IW SLL AC+
Sbjct: 491 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 550
Query: 552 HGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGMKKVPGCT 611
HG VELGES AE L ++EP+NPG+YVLLSNIYA AG+W+EVA+ R LND+GMKKVPGC+
Sbjct: 551 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 610
Query: 612 TIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDMDEEWKEGAL 671
+IE+D+VVHEF++GDK HP++ +IY MLEE++ L+ GFVPDTSEVL +M+EEWKEGAL
Sbjct: 611 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGAL 670
Query: 672 SHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLMSKIFNREIIARDRNRFHHF 731
HHSEKLAIAFGLISTKPGT +TI+KNLRVCRNCH ATKL+SKI+ REIIARDR RFHHF
Sbjct: 671 RHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHF 730
Query: 732 KDGSCSCNDYW 739
+DG CSCNDYW
Sbjct: 731 RDGVCSCNDYW 741
BLAST of Spg021821 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 607.4 bits (1565), Expect = 1.5e-173
Identity = 297/736 (40.35%), Postives = 451/736 (61.28%), Query Frame = 0
Query: 37 LKLLSRCQSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEP 96
+ L+ RC S+R L+Q H +I+TG + ++ SKL +A+S F + YA +F+ I +P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 97 NLFIWNSMIRGLSMSPSPILALIFFVRMI-HSGVEPNSYTFPFLLKSCAKLASAHEGKQI 156
N F WN++IR + P P+L++ F+ M+ S PN YTFPFL+K+ A+++S G+ +
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 157 HAYVLKLGLVFDVYIHTSLINMYVQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSM 216
H +K + DV++ SLI+ Y G+ +
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGD-------------------------------L 213
Query: 217 DRARQLFDEMPVRDVVSWNAMISGYAQTGRSQEALLLFEEMRKANVPPNESTIVSVLSAC 276
D A ++F + +DVVSWN+MI+G+ Q G +AL LF++M +V + T+V VLSAC
Sbjct: 214 DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 273
Query: 277 AQSNALDLGNSMRSWIEDRGLRSNLKLINALIDMYSKCGDLQTARQLFD----------- 336
A+ L+ G + S+IE+ + NL L NA++DMY+KCG ++ A++LFD
Sbjct: 274 AKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 333
Query: 337 --------------------DMPERDVISWNVMIGGYTHMCSYKEALALFRQM-LASGIE 396
MP++D+++WN +I Y EAL +F ++ L ++
Sbjct: 334 TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 393
Query: 397 PTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAARQV 456
ITL++ L +CA +GA++LG+WIH+YI K+ + + ++LI MY+KCG++E +R+V
Sbjct: 394 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 453
Query: 457 FDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVLSACKHAGLV 516
F+ + + + W+AMI GLAMHG ++A ++F +M ++PN +TF V AC H GLV
Sbjct: 454 FNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 513
Query: 517 DLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLG 576
D F M +Y I P+ +HY C++D+LGR+G E+A I+ M + P ++WG+LLG
Sbjct: 514 DEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLG 573
Query: 577 ACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTRLNDRGMKKV 636
AC+ H + L E RL ELEP N GA+VLLSNIYA GKW+ V+ +R + G+KK
Sbjct: 574 ACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKE 633
Query: 637 PGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEVLYDM-DEEW 696
PGC++IE+D ++HEFL GD HP SE +Y L EV ++LK+ G+ P+ S+VL + +EE
Sbjct: 634 PGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEM 693
Query: 697 KEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLMSKIFNREIIARDRN 739
KE +L+ HSEKLAI +GLIST+ I +IKNLRVC +CHS KL+S++++REII RDR
Sbjct: 694 KEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRY 738
BLAST of Spg021821 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 575.1 bits (1481), Expect = 8.1e-164
Identity = 296/804 (36.82%), Postives = 456/804 (56.72%), Query Frame = 0
Query: 40 LSRCQSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSA-VSRFGDISYAVSLF-NSIEEPN 99
L C++I L+ H + K GL N ++KL+ S + +S+A +F NS
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 100 LFIWNSMIRGLSMSPSPILALIFFVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHA 159
F++NS+IRG + S A++ F+RM++SG+ P+ YTFPF L +CAK + G QIH
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 160 YVLKLGLVFDVYIHTSLINMYVQSGEMNNAQLVFDQSNFRDAISFTALIAGYA------- 219
++K+G D+++ SL++ Y + GE+++A+ VFD+ + R+ +S+T++I GYA
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 220 ------------------------------------------------------------ 279
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 280 ----LWGSMDRARQLFDEMPVRDVVSWNAMISGYAQTGRSQEALLLFEEMRKANVPPNES 339
++D A++LFDE ++ NAM S Y + G ++EAL +F M + V P+
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 340 TIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNLKLINALIDMYSKC------------- 399
+++S +S+C+Q + G S ++ G S + NALIDMY KC
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 400 ------------------GDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFR 459
G++ A + F+ MPE++++SWN +I G ++EA+ +F
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 460 QMLA-SGIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKC 519
M + G+ +T+++I +C HLGA+DL KWI+ YI KN L T+L+DM+++C
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 520 GNIEAARQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVL 579
G+ E+A +F+ + + +++W A I +AM G A++A ELF M G++P+ + FVG L
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 580 SACKHAGLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPD 639
+AC H GLV G++ F SM+K + +SP+ HYGCM+DLLGRAGL EEA LI++M M+P+
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 640 GAIWGSLLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTR 699
IW SLL ACR G VE+ AE++ L P+ G+YVLLSN+YA AG+W+++A++R
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 700 LNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEV 739
+ ++G++K PG ++I++ HEF GD+ HP+ +I ML+EV ++ G VPD S V
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
BLAST of Spg021821 vs. TAIR 10
Match:
AT3G12770.1 (mitochondrial editing factor 22 )
HSP 1 Score: 570.5 bits (1469), Expect = 2.0e-162
Identity = 283/690 (41.01%), Postives = 427/690 (61.88%), Query Frame = 0
Query: 49 LRQIHAQIIKTGLHNTQFALSKLIEFSAVSRFGDISYAVSLFNSIEEPNLFIWNSMIRGL 108
L+QIHA+++ GL + F ++KLI A S FGDI++A +F+ + P +F WN++IRG
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 96
Query: 109 SMSPSPILALIFFVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAYVLKLGLVFDV 168
S + AL+ + M + V P+S+TFP LLK+C+ L+ G+ +HA V +LG DV
Sbjct: 97 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 156
Query: 169 YIHTSLINMYVQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGSMDRARQLFDEMPVR 228
++ LI +Y + + +A+ VF+ +P R
Sbjct: 157 FVQNGLIALYAKCRRLGSARTVFEGL-----------------------------PLPER 216
Query: 229 DVVSWNAMISGYAQTGRSQEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMR 288
+VSW A++S YAQ G EAL +F +MRK +V P+ +VSVL+A L G S+
Sbjct: 217 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 276
Query: 289 SWIEDRGLRSNLKLINALIDMYSKCGDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYK 348
+ + GL L+ +L MY+KCG + TA+ LFD M ++I WN MI GY +
Sbjct: 277 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 336
Query: 349 EALALFRQMLASGIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLI 408
EA+ +F +M+ + P I++ + + +CA +G+++ + ++ Y+ ++ + ++LI
Sbjct: 337 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 396
Query: 409 DMYAKCGNIEAARQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEI 468
DM+AKCG++E AR VFD + + W+AMI G +HG+A +A L+ M G+ PN++
Sbjct: 397 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 456
Query: 469 TFVGVLSACKHAGLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQN 528
TF+G+L AC H+G+V G FF+ M D+KI+P+ QHY C+IDLLGRAG ++A +I+
Sbjct: 457 TFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 516
Query: 529 MEMKPDGAIWGSLLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEV 588
M ++P +WG+LL AC+ H VELGE A++LF ++P N G YV LSN+YA A WD V
Sbjct: 517 MPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRV 576
Query: 589 ARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFV 648
A +R R+ ++G+ K GC+ +EV + F VGDK HP+ E+I + +E ++ +LK GFV
Sbjct: 577 AEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 636
Query: 649 PDTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHSATKLM 708
+ L+D+++E E L HSE++AIA+GLIST GTP+ I KNLR C NCH+ATKL+
Sbjct: 637 ANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLI 694
Query: 709 SKIFNREIIARDRNRFHHFKDGSCSCNDYW 739
SK+ +REI+ RD NRFHHFKDG CSC DYW
Sbjct: 697 SKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
BLAST of Spg021821 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 570.5 bits (1469), Expect = 2.0e-162
Identity = 295/803 (36.74%), Postives = 455/803 (56.66%), Query Frame = 0
Query: 40 LSRCQSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSA-VSRFGDISYAVSLF-NSIEEPN 99
L C++I L+ H + K GL N ++KL+ S + +S+A +F NS
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 100 LFIWNSMIRGLSMSPSPILALIFFVRMIHSGVEPNSYTFPFLLKSCAKLASAHEGKQIHA 159
F++NS+IRG + S A++ F+RM++SG+ P+ YTFPF L +CAK + G QIH
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 160 YVLKLGLVFDVYIHTSLINMYVQSGEMNNAQLVFDQSNFRDAISFTALIAGYA------- 219
++K+G D+++ SL++ Y + GE+++A+ VFD+ + R+ +S+T++I GYA
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 220 ------------------------------------------------------------ 279
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 280 ----LWGSMDRARQLFDEMPVRDVVSWNAMISGYAQTGRSQEALLLFEEMRKANVPPNES 339
++D A++LFDE ++ NAM S Y + G ++EAL +F M + V P+
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 340 TIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNLKLINALIDMYSKC------------- 399
+++S +S+C+Q + G S ++ G S + NALIDMY KC
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 400 ------------------GDLQTARQLFDDMPERDVISWNVMIGGYTHMCSYKEALALFR 459
G++ A + F+ MPE++++SWN +I G ++EA+ +F
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 460 QMLA-SGIEPTDITLLNILPSCAHLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKC 519
M + G+ +T+++I +C HLGA+DL KWI+ YI KN L T+L+DM+++C
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 520 GNIEAARQVFDGMNIKSLASWNAMICGLAMHGQADQAFELFSQMSSYGIEPNEITFVGVL 579
G+ E+A +F+ + + +++W A I +AM G A++A ELF M G++P+ + FVG L
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 580 SACKHAGLVDLGRQFFSSMVKDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPD 639
+AC H GLV G++ F SM+K + +SP+ HYGCM+DLLGRAGL EEA LI++M M+P+
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 640 GAIWGSLLGACRDHGRVELGESVAERLFELEPDNPGAYVLLSNIYAGAGKWDEVARIRTR 699
IW SLL ACR G VE+ AE++ L P+ G+YVLLSN+YA AG+W+++A++R
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 700 LNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKAFGFVPDTSEV 738
+ ++G++K PG ++I++ HEF GD+ HP+ +I ML+EV ++ G VPD S V
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023515625.1 | 0.0e+00 | 91.46 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita ... | [more] |
XP_004150015.1 | 0.0e+00 | 91.46 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucumis sa... | [more] |
KAG6589865.1 | 0.0e+00 | 91.19 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022987625.1 | 0.0e+00 | 91.19 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita ... | [more] |
XP_022961045.1 | 0.0e+00 | 91.33 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q9LN01 | 2.7e-289 | 64.30 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O82380 | 2.1e-172 | 40.35 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LUJ2 | 1.1e-162 | 36.82 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Q9LTV8 | 2.8e-161 | 41.01 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
Q9SHZ8 | 4.1e-160 | 40.53 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LU28 | 0.0e+00 | 91.46 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G3068... | [more] |
A0A6J1JHE6 | 0.0e+00 | 91.19 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucurbit... | [more] |
A0A5A7TTJ1 | 0.0e+00 | 91.06 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1HAU9 | 0.0e+00 | 91.33 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucurbit... | [more] |
A0A1S3CMX0 | 0.0e+00 | 90.66 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |
AT1G08070.1 | 1.9e-290 | 64.30 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 1.5e-173 | 40.35 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.2 | 8.1e-164 | 36.82 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
AT3G12770.1 | 2.0e-162 | 41.01 | mitochondrial editing factor 22 | [more] |
AT3G22690.1 | 2.0e-162 | 36.74 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |