Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGCATTCGTTTTCAGTTGGTTTCTCATTTGCCTATCTTTAACGTTTAAATAATCTTCTTTGGACTGAATGGATGATGGCCAATCTAATGACAGAAGTTTCATGCAATCATGAAGCATTATTTATTTTAGGCTCGCACTCACGATGAACATCTTCATTTAAGTGCATTTTACTTGAAGTTTCAGATTAATAACGTGACACCCCAAACATCTTTAATCTCATTTGGTAGATTGTCGAAGCAAGAGACCTACTTCTGAATAAACTTCAAAGAAAAGAGAAATCACAGGTGAATTCTGAGGATACTTGCGACAACAATTTGGCTTGTAGCACTCAAAAGGGAAATATGTCATCTGAGGAAAAAGTAAACTCGACTCAAATCATTCAAGGTGGTGAAGGATTGGAAATTCAGGATGGAGATGGAGATGGAGAGACTACCAATAAACAGTTGGAAAAGGCAGATTCAAAAACTTGTAGAGATGCCAAAGAAAGGGTTGGACCTGAAGGTTTGTCATTCAGTGATATAGAGGATGATGGGACCGATTTGTCTGGAAGATTCTCTGTAACAAACCCCCCAAGGACTTCTTCATCAACCGAGGCCAGTGATTGGGTTCAGCTGCGTGAAAATCTAGACTCAAAGCTGGATCAACAGAGGCCATGGAAGCAGGACAGAGATTCAGAAGCTGGGGATTCAAGTGATTGGTTTAATGTGGATGAATTTGATTAGAAAGGTGTACATAACCACTAGCACACCTCGTATTTCCCCAACCTCAATCCACTTTTCTTTCCCCAAAAAGTTTTTGAGTAAAAAAAAAAAACACACCTTAATTTTCTTTGCAGTAGAGTTTTTTTTTTTTTTCCCCAAAAATTCTTTGCAGTAGAGTTGTCACAAAGGCTTAGGTCTTATTTATATTTGTCTTCCCTCTAAGGATAACTTTTGTGCATATGTTTTCTTCATAAGGTGTTTGGATTCTAGTAGAGAATTTAACACAATGTTATTTCCTCAATTGAACATCCCAACCAA
mRNA sequence
ATGCATGCATTCATTGTCGAAGCAAGAGACCTACTTCTGAATAAACTTCAAAGAAAAGAGAAATCACAGGTGAATTCTGAGGATACTTGCGACAACAATTTGGCTTGTAGCACTCAAAAGGGAAATATGTCATCTGAGGAAAAAGTAAACTCGACTCAAATCATTCAAGGTGGTGAAGGATTGGAAATTCAGGATGGAGATGGAGATGGAGAGACTACCAATAAACAGTTGGAAAAGGCAGATTCAAAAACTTGTAGAGATGCCAAAGAAAGGGTTGGACCTGAAGGTTTGTCATTCAGTGATATAGAGGATGATGGGACCGATTTGTCTGGAAGATTCTCTGTAACAAACCCCCCAAGGACTTCTTCATCAACCGAGGCCAGTGATTGGGTTCAGCTGCGTGAAAATCTAGACTCAAAGCTGGATCAACAGAGGCCATGGAAGCAGGACAGAGATTCAGAAGCTGGGGATTCAAGTGATTGGTTTAATGTGGATGAATTTGATTAG
Coding sequence (CDS)
ATGCATGCATTCATTGTCGAAGCAAGAGACCTACTTCTGAATAAACTTCAAAGAAAAGAGAAATCACAGGTGAATTCTGAGGATACTTGCGACAACAATTTGGCTTGTAGCACTCAAAAGGGAAATATGTCATCTGAGGAAAAAGTAAACTCGACTCAAATCATTCAAGGTGGTGAAGGATTGGAAATTCAGGATGGAGATGGAGATGGAGAGACTACCAATAAACAGTTGGAAAAGGCAGATTCAAAAACTTGTAGAGATGCCAAAGAAAGGGTTGGACCTGAAGGTTTGTCATTCAGTGATATAGAGGATGATGGGACCGATTTGTCTGGAAGATTCTCTGTAACAAACCCCCCAAGGACTTCTTCATCAACCGAGGCCAGTGATTGGGTTCAGCTGCGTGAAAATCTAGACTCAAAGCTGGATCAACAGAGGCCATGGAAGCAGGACAGAGATTCAGAAGCTGGGGATTCAAGTGATTGGTTTAATGTGGATGAATTTGATTAG
Protein sequence
MHAFIVEARDLLLNKLQRKEKSQVNSEDTCDNNLACSTQKGNMSSEEKVNSTQIIQGGEGLEIQDGDGDGETTNKQLEKADSKTCRDAKERVGPEGLSFSDIEDDGTDLSGRFSVTNPPRTSSSTEASDWVQLRENLDSKLDQQRPWKQDRDSEAGDSSDWFNVDEFD
Homology
BLAST of Spg021801 vs. NCBI nr
Match:
KAG6587879.1 (hypothetical protein SDJN03_16444, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 216.9 bits (551), Expect = 1.4e-52
Identity = 123/167 (73.65%), Postives = 134/167 (80.24%), Query Frame = 0
Query: 5 IVEARDLLLNKLQRKEKSQVNSEDTCD-NNLACSTQKGNMSSEEKVNSTQIIQGGEGLEI 64
IVEAR+LLL+K QRKEKSQVNSEDTCD NNL C TQ GNM SEEK NSTQ I+GGEGLEI
Sbjct: 248 IVEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLEI 307
Query: 65 QDGDGDGETTNKQLEKADSKTCRDAKERVGPEG-LSFSDIEDDGTDLSGRFSVTNPPRTS 124
DG+ E TN QL+ AD KT D KER G EG +SFS+IED GTDLSG+FSV PPRTS
Sbjct: 308 M--DGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEIEDYGTDLSGKFSVITPPRTS 367
Query: 125 SSTEASDWVQLRENLDSKLD-QQRPWKQDRDSEAGDSSDWFNVDEFD 169
SSTE+SDWV L EN SKLD QQR WKQD +S+ GDSSDWFNVDEFD
Sbjct: 368 SSTESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 412
BLAST of Spg021801 vs. NCBI nr
Match:
XP_023002875.1 (uncharacterized protein LOC111496608 [Cucurbita maxima])
HSP 1 Score: 215.3 bits (547), Expect = 4.0e-52
Identity = 122/168 (72.62%), Postives = 134/168 (79.76%), Query Frame = 0
Query: 5 IVEARDLLLNKLQRKEKSQVNSEDTCD-NNLACSTQKGNMSSEEKVNSTQIIQGGEGLEI 64
I+EAR+LLL+K QRKEKSQVNSEDTCD NNL C TQ GNM SEEK NSTQ I+GGEGL I
Sbjct: 247 IIEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLGI 306
Query: 65 QDGDGDGETTNKQLEKADSKTCRDAKERVGPEG-LSFSDIEDDGTDLSGRFSVTNPPRTS 124
DG+ E TN QL+ ADSKT D KER G EG +SFS+IED GTDLSG+FSV PPRTS
Sbjct: 307 M--DGEEENTNHQLKMADSKTSADVKERSGLEGTISFSEIEDYGTDLSGKFSVITPPRTS 366
Query: 125 SSTEASDWVQLRENLDSKLD--QQRPWKQDRDSEAGDSSDWFNVDEFD 169
SSTE+SDWV L EN SKLD QQR WKQD +S+ GDSSDWFNVDEFD
Sbjct: 367 SSTESSDWVHLHENAGSKLDQQQQRTWKQDTESDGGDSSDWFNVDEFD 412
BLAST of Spg021801 vs. NCBI nr
Match:
XP_022925051.1 (uncharacterized protein LOC111432412 [Cucurbita moschata])
HSP 1 Score: 214.9 bits (546), Expect = 5.2e-52
Identity = 122/167 (73.05%), Postives = 134/167 (80.24%), Query Frame = 0
Query: 5 IVEARDLLLNKLQRKEKSQVNSEDTCD-NNLACSTQKGNMSSEEKVNSTQIIQGGEGLEI 64
IVEAR+LLL+K QRKEKSQVNSEDTCD NNL C TQ GNM SEEK NSTQ I+GGEGLEI
Sbjct: 247 IVEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLEI 306
Query: 65 QDGDGDGETTNKQLEKADSKTCRDAKERVGPEG-LSFSDIEDDGTDLSGRFSVTNPPRTS 124
DG+ E TN QL+ AD KT D KER G EG +SFS+IE+ GTDLSG+FSV PPRTS
Sbjct: 307 M--DGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEIENYGTDLSGKFSVITPPRTS 366
Query: 125 SSTEASDWVQLRENLDSKLD-QQRPWKQDRDSEAGDSSDWFNVDEFD 169
SSTE+SDWV L EN SKLD QQR WKQD +S+ GDSSDWFNVDEFD
Sbjct: 367 SSTESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 411
BLAST of Spg021801 vs. NCBI nr
Match:
KAG7021764.1 (hypothetical protein SDJN02_15491 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 214.9 bits (546), Expect = 5.2e-52
Identity = 122/167 (73.05%), Postives = 134/167 (80.24%), Query Frame = 0
Query: 5 IVEARDLLLNKLQRKEKSQVNSEDTCD-NNLACSTQKGNMSSEEKVNSTQIIQGGEGLEI 64
IVEAR+LLL+K QRKEKSQVNSEDTCD NNL C TQ GNM SEEK NSTQ I+GGEGLEI
Sbjct: 63 IVEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLEI 122
Query: 65 QDGDGDGETTNKQLEKADSKTCRDAKERVGPEG-LSFSDIEDDGTDLSGRFSVTNPPRTS 124
DG+ E TN QL+ AD KT D KER G EG +SFS+IE+ GTDLSG+FSV PPRTS
Sbjct: 123 M--DGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEIENYGTDLSGKFSVITPPRTS 182
Query: 125 SSTEASDWVQLRENLDSKLD-QQRPWKQDRDSEAGDSSDWFNVDEFD 169
SSTE+SDWV L EN SKLD QQR WKQD +S+ GDSSDWFNVDEFD
Sbjct: 183 SSTESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 227
BLAST of Spg021801 vs. NCBI nr
Match:
XP_023530961.1 (uncharacterized protein LOC111793348 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 214.5 bits (545), Expect = 6.8e-52
Identity = 122/167 (73.05%), Postives = 133/167 (79.64%), Query Frame = 0
Query: 5 IVEARDLLLNKLQRKEKSQVNSEDTCD-NNLACSTQKGNMSSEEKVNSTQIIQGGEGLEI 64
IVEAR+LLL+K QRKEKSQVNSEDTCD NNL C TQ GNM SEEK STQ +GGEGLEI
Sbjct: 247 IVEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKEKSTQTTEGGEGLEI 306
Query: 65 QDGDGDGETTNKQLEKADSKTCRDAKERVGPEG-LSFSDIEDDGTDLSGRFSVTNPPRTS 124
DG+ E TN QL+ ADSKT D KER G EG +SFS+IED GTDLSG+FSV PPRTS
Sbjct: 307 M--DGEEENTNHQLKMADSKTSADVKERSGLEGTISFSEIEDYGTDLSGKFSVITPPRTS 366
Query: 125 SSTEASDWVQLRENLDSKLD-QQRPWKQDRDSEAGDSSDWFNVDEFD 169
SSTE+SDWV L EN SKLD QQR WKQD +S+ GDSSDWFNVDEFD
Sbjct: 367 SSTESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 411
BLAST of Spg021801 vs. ExPASy TrEMBL
Match:
A0A6J1KQ70 (uncharacterized protein LOC111496608 OS=Cucurbita maxima OX=3661 GN=LOC111496608 PE=4 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 1.9e-52
Identity = 122/168 (72.62%), Postives = 134/168 (79.76%), Query Frame = 0
Query: 5 IVEARDLLLNKLQRKEKSQVNSEDTCD-NNLACSTQKGNMSSEEKVNSTQIIQGGEGLEI 64
I+EAR+LLL+K QRKEKSQVNSEDTCD NNL C TQ GNM SEEK NSTQ I+GGEGL I
Sbjct: 247 IIEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLGI 306
Query: 65 QDGDGDGETTNKQLEKADSKTCRDAKERVGPEG-LSFSDIEDDGTDLSGRFSVTNPPRTS 124
DG+ E TN QL+ ADSKT D KER G EG +SFS+IED GTDLSG+FSV PPRTS
Sbjct: 307 M--DGEEENTNHQLKMADSKTSADVKERSGLEGTISFSEIEDYGTDLSGKFSVITPPRTS 366
Query: 125 SSTEASDWVQLRENLDSKLD--QQRPWKQDRDSEAGDSSDWFNVDEFD 169
SSTE+SDWV L EN SKLD QQR WKQD +S+ GDSSDWFNVDEFD
Sbjct: 367 SSTESSDWVHLHENAGSKLDQQQQRTWKQDTESDGGDSSDWFNVDEFD 412
BLAST of Spg021801 vs. ExPASy TrEMBL
Match:
A0A6J1EB50 (uncharacterized protein LOC111432412 OS=Cucurbita moschata OX=3662 GN=LOC111432412 PE=4 SV=1)
HSP 1 Score: 214.9 bits (546), Expect = 2.5e-52
Identity = 122/167 (73.05%), Postives = 134/167 (80.24%), Query Frame = 0
Query: 5 IVEARDLLLNKLQRKEKSQVNSEDTCD-NNLACSTQKGNMSSEEKVNSTQIIQGGEGLEI 64
IVEAR+LLL+K QRKEKSQVNSEDTCD NNL C TQ GNM SEEK NSTQ I+GGEGLEI
Sbjct: 247 IVEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLEI 306
Query: 65 QDGDGDGETTNKQLEKADSKTCRDAKERVGPEG-LSFSDIEDDGTDLSGRFSVTNPPRTS 124
DG+ E TN QL+ AD KT D KER G EG +SFS+IE+ GTDLSG+FSV PPRTS
Sbjct: 307 M--DGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEIENYGTDLSGKFSVITPPRTS 366
Query: 125 SSTEASDWVQLRENLDSKLD-QQRPWKQDRDSEAGDSSDWFNVDEFD 169
SSTE+SDWV L EN SKLD QQR WKQD +S+ GDSSDWFNVDEFD
Sbjct: 367 SSTESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 411
BLAST of Spg021801 vs. ExPASy TrEMBL
Match:
A0A6J1H9V9 (uncharacterized protein LOC111461455 OS=Cucurbita moschata OX=3662 GN=LOC111461455 PE=4 SV=1)
HSP 1 Score: 194.9 bits (494), Expect = 2.7e-46
Identity = 114/166 (68.67%), Postives = 127/166 (76.51%), Query Frame = 0
Query: 5 IVEARDLLLNKLQRKEKSQVNSEDTCDNNLACSTQKGNMSSEEKVNSTQIIQGGEGLEIQ 64
IVEAR+ LL+KLQ + S+VNSEDTCD QKGNM+SEEK NS+QII+GGEGLEI
Sbjct: 247 IVEARNTLLDKLQTQNTSRVNSEDTCDQ------QKGNMASEEKANSSQIIEGGEGLEI- 306
Query: 65 DGDGDGETTNKQLEKADSKTCRDAKERVGPEGLSF--SDIEDDGTDLSGRFSVTNPPRTS 124
GE TN+ LEKADSKT DAK RV EG+SF SDIE DGTDL+GR T PPRTS
Sbjct: 307 -----GEKTNQGLEKADSKTSTDAKNRVRLEGISFSDSDIEGDGTDLAGR---TKPPRTS 366
Query: 125 SSTEASDWVQLRENLDSKLDQQRPWKQDRDSEAGDSSDWFNVDEFD 169
SS E++DWVQL EN KLDQQ+ WKQDRDSE GDSSDWFNVDEFD
Sbjct: 367 SSAESNDWVQLHENPVPKLDQQKAWKQDRDSEGGDSSDWFNVDEFD 397
BLAST of Spg021801 vs. ExPASy TrEMBL
Match:
A0A6J1JB79 (uncharacterized protein LOC111485208 OS=Cucurbita maxima OX=3661 GN=LOC111485208 PE=4 SV=1)
HSP 1 Score: 190.7 bits (483), Expect = 5.1e-45
Identity = 112/167 (67.07%), Postives = 127/167 (76.05%), Query Frame = 0
Query: 5 IVEARDLLLNKLQRKEKSQVNSEDTCDNNLACSTQKGNMSSEEKVNSTQIIQGGEGLEIQ 64
IVEAR+ LL+KLQR+ S+VNSEDTCD QKGNM+SEEK NS+QII+GGEGLEI
Sbjct: 248 IVEARNTLLDKLQRQNTSRVNSEDTCDQ------QKGNMASEEKANSSQIIEGGEGLEI- 307
Query: 65 DGDGDGETTNKQLEKADSKTCRDAKERVGPEGLSFSDI---EDDGTDLSGRFSVTNPPRT 124
GE TN+ LEKADSKT DAK+ V EG+SFSD E+DGTDL+GR T PPRT
Sbjct: 308 -----GEKTNQGLEKADSKTSTDAKKGVRLEGISFSDSDIEEEDGTDLAGR---TKPPRT 367
Query: 125 SSSTEASDWVQLRENLDSKLDQQRPWKQDRDSEAGDSSDWFNVDEFD 169
SSS E++DWVQL EN KL QQ+ WKQDRDSE GDSSDWFNVDEFD
Sbjct: 368 SSSAESNDWVQLHENPVPKLGQQKAWKQDRDSEGGDSSDWFNVDEFD 399
BLAST of Spg021801 vs. ExPASy TrEMBL
Match:
A0A6J1BYC0 (uncharacterized protein LOC111006850 OS=Momordica charantia OX=3673 GN=LOC111006850 PE=4 SV=1)
HSP 1 Score: 148.3 bits (373), Expect = 2.9e-32
Identity = 90/164 (54.88%), Postives = 109/164 (66.46%), Query Frame = 0
Query: 5 IVEARDLLLNKLQRKEKSQVNSEDTCDNNLACSTQKGNMSSEEKVNSTQIIQGGEGLEIQ 64
I+EAR++LL QRK+++QVNS+ NN C T++GNM EK STQII+G EG
Sbjct: 245 IIEARNILLEMHQRKKRAQVNSDHISTNNSVCGTKEGNMPPGEKAISTQIIKGSEG---- 304
Query: 65 DGDGDGETTNKQLEKADSKTCRDAKERVGPEGLSFSDIEDDGTDLSGRFSVTNPPRTSSS 124
LEKADS++ RDAKER G E +SFSD+E+DG+D SGRFSVT P
Sbjct: 305 ------------LEKADSESSRDAKERFGLEDISFSDMENDGSDFSGRFSVTKSP----- 364
Query: 125 TEASDWVQLRENLDSKLDQQRPWKQDRDSEAGDSSDWFNVDEFD 169
E+ WV+L NLDSKL Q KQDRDSE G+SSDWFNVDEFD
Sbjct: 365 AESGGWVKLHGNLDSKLVQHTTSKQDRDSE-GESSDWFNVDEFD 386
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6587879.1 | 1.4e-52 | 73.65 | hypothetical protein SDJN03_16444, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023002875.1 | 4.0e-52 | 72.62 | uncharacterized protein LOC111496608 [Cucurbita maxima] | [more] |
XP_022925051.1 | 5.2e-52 | 73.05 | uncharacterized protein LOC111432412 [Cucurbita moschata] | [more] |
KAG7021764.1 | 5.2e-52 | 73.05 | hypothetical protein SDJN02_15491 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_023530961.1 | 6.8e-52 | 73.05 | uncharacterized protein LOC111793348 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1KQ70 | 1.9e-52 | 72.62 | uncharacterized protein LOC111496608 OS=Cucurbita maxima OX=3661 GN=LOC111496608... | [more] |
A0A6J1EB50 | 2.5e-52 | 73.05 | uncharacterized protein LOC111432412 OS=Cucurbita moschata OX=3662 GN=LOC1114324... | [more] |
A0A6J1H9V9 | 2.7e-46 | 68.67 | uncharacterized protein LOC111461455 OS=Cucurbita moschata OX=3662 GN=LOC1114614... | [more] |
A0A6J1JB79 | 5.1e-45 | 67.07 | uncharacterized protein LOC111485208 OS=Cucurbita maxima OX=3661 GN=LOC111485208... | [more] |
A0A6J1BYC0 | 2.9e-32 | 54.88 | uncharacterized protein LOC111006850 OS=Momordica charantia OX=3673 GN=LOC111006... | [more] |
Match Name | E-value | Identity | Description | |