Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGATGACGAGTCAAGACCAATTGCTCGATGCTGCCGAAGAATATGATGATGAGGATTTGGGCCAGTTAGGCCAGACATTGTCCGCTGGAGAGACTTCAGGTTAATTTACATTATTTCTCTTCTATGTTCATTGGCATATGACATGTTATTGTAATCTTTTCTTCTTCTTTTTTCTTGGATTCAGATGGTAATAGTACGACTAATAGGACGACACGCTCCTATTCGCTTAATATTAAGTTGGATAGATATGTCGTACTTCATGGGCGAATTCCCATTGAAATTGACCCTAATTTGAAGAAGCCAGTTTGCAACTGGGCTGTGAAGTTTAGCAACGCAATTGGTACAGCTGTGAGAGAATCATTTTCGATTCGTTGCGCATCAATCAGAGATGTACCAACAGATTGTAAGGAACTTGTCAAAAGTCGATTGATGGTAAGTTAAACACGTCATTAATTCTGAAAACATTTTATAACCTATGTATTATAATAAATGCACCTTTATGTAGAAACATTTCGATTTGGACCTATCCAAAACAGTAATGATCAGGTTCCTTGCACGACAAATGCAAAACATATTCAAAGAGTATCGAGCGAATTTACACAGACACTACAAAAAATATGACACCCCTGAAGAGGGCTCATTCCACATGTTTGTTTCATTCGATTTGTTGCATATGTTTAGAGGGCTCATTCCAACGTTTTCATGTTAG
mRNA sequence
AAGATGACGAGTCAAGACCAATTGCTCGATGCTGCCGAAGAATATGATGATGAGGATTTGGGCCAGTTAGGCCAGACATTGTCCGCTGGAGAGACTTCAGATGGTAATAGTACGACTAATAGGACGACACGCTCCTATTCGCTTAATATTAAGTTGGATAGATATGTCGTACTTCATGGGCGAATTCCCATTGAAATTGACCCTAATTTGAAGAAGCCAGTTTGCAACTGGGCTGTGAAGTTTAGCAACGCAATTGGTACAGCTGTGAGAGAATCATTTTCGATTCGTTGCGCATCAATCAGAGATGTACCAACAGATTGTAAGGAACTTGTCAAAAGTCGATTGATGAAACATTTCGATTTGGACCTATCCAAAACAGTAATGATCAGGTTCCTTGCACGACAAATGCAAAACATATTCAAAGAGTATCGAGCGAATTTACACAGACACTACAAAAAATATGACACCCCTGAAGAGGGCTCATTCCACATGTTTGTTTCATTCGATTTGTTGCATATGTTTAGAGGGCTCATTCCAACGTTTTCATGTTAG
Coding sequence (CDS)
AAGATGACGAGTCAAGACCAATTGCTCGATGCTGCCGAAGAATATGATGATGAGGATTTGGGCCAGTTAGGCCAGACATTGTCCGCTGGAGAGACTTCAGATGGTAATAGTACGACTAATAGGACGACACGCTCCTATTCGCTTAATATTAAGTTGGATAGATATGTCGTACTTCATGGGCGAATTCCCATTGAAATTGACCCTAATTTGAAGAAGCCAGTTTGCAACTGGGCTGTGAAGTTTAGCAACGCAATTGGTACAGCTGTGAGAGAATCATTTTCGATTCGTTGCGCATCAATCAGAGATGTACCAACAGATTGTAAGGAACTTGTCAAAAGTCGATTGATGAAACATTTCGATTTGGACCTATCCAAAACAGTAATGATCAGGTTCCTTGCACGACAAATGCAAAACATATTCAAAGAGTATCGAGCGAATTTACACAGACACTACAAAAAATATGACACCCCTGAAGAGGGCTCATTCCACATGTTTGTTTCATTCGATTTGTTGCATATGTTTAGAGGGCTCATTCCAACGTTTTCATGTTAG
Protein sequence
KMTSQDQLLDAAEEYDDEDLGQLGQTLSAGETSDGNSTTNRTTRSYSLNIKLDRYVVLHGRIPIEIDPNLKKPVCNWAVKFSNAIGTAVRESFSIRCASIRDVPTDCKELVKSRLMKHFDLDLSKTVMIRFLARQMQNIFKEYRANLHRHYKKYDTPEEGSFHMFVSFDLLHMFRGLIPTFSC
Homology
BLAST of Spg021457 vs. NCBI nr
Match:
XP_038902987.1 (uncharacterized protein LOC120089695 [Benincasa hispida])
HSP 1 Score: 129.8 bits (325), Expect = 2.4e-26
Identity = 70/158 (44.30%), Postives = 104/158 (65.82%), Query Frame = 0
Query: 2 MTSQDQLLDAAEEYDDEDLGQLGQTLSAGETSDGNSTTNRTTRSYSLNIKLDRYVVLHGR 61
M++ ++ +A EE+ ++L + S G+TSD +ST+NR R +S NIKL++YV HG
Sbjct: 1 MSTPNRQREADEEF--QELYLNNKVSSVGDTSDSSSTSNRKKREHSRNIKLEKYVQKHGI 60
Query: 62 IPIEIDPNLKKPVCNWAVKFSNAIGTAVRESFSIRCASIRDVPTDCKELVKSRLMKHFDL 121
I I I+ KP+ +V+FSNAIG AVR +F + C + +VP + EL K +L+ HF L
Sbjct: 61 IIIVINEGETKPISKHSVRFSNAIGVAVRFAFPVHCRTFTEVPNEFIELAKIQLLAHFKL 120
Query: 122 DLSKTVMIRFLARQMQNIFKEYRANLHRHYKKYDTPEE 160
DLS + RF+ QMQN FKE+RA+L+RHY+K P++
Sbjct: 121 DLSSQRLNRFIEHQMQNSFKEFRADLNRHYRKCGNPQQ 156
BLAST of Spg021457 vs. NCBI nr
Match:
XP_038887409.1 (poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida])
HSP 1 Score: 117.5 bits (293), Expect = 1.2e-22
Identity = 57/137 (41.61%), Postives = 91/137 (66.42%), Query Frame = 0
Query: 26 TLSAGETSDGNSTT---NRTTRSYSLNIKLDRYVVLHGRIPIEIDPNLKKPVCNWAVKFS 85
T+++G S + R TR +S N++LDR+V +HGRI IEID + KPVC A KFS
Sbjct: 550 TMASGSRSCSRQVSRGEKRRTRGHSRNLELDRHVNIHGRIRIEIDEEVGKPVCANATKFS 609
Query: 86 NAIGTAVRESFSIRCASIRDVPTDCKELVKSRLMKHFDLDLSKTVMIRFLARQMQNIFKE 145
NAIGT R + +RC DV + ++LV +L+ +FD D+ K + +++ +++QN FKE
Sbjct: 610 NAIGTIARNTIPLRCKDWSDVSKEVRDLVVDQLLSYFDFDVGKKHVKKYVLQRVQNTFKE 669
Query: 146 YRANLHRHYKKYDTPEE 160
YR++L++HY+++ P+E
Sbjct: 670 YRSDLYKHYRRFKDPKE 686
BLAST of Spg021457 vs. NCBI nr
Match:
TYK21492.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 111.3 bits (277), Expect = 8.8e-21
Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 0
Query: 16 DDEDLGQLGQTLSAGETSDGNSTTNRT----TRSYSLNIKLDRYVVLHGRIPIEIDPNLK 75
DD D G + S G+ + G+S+ T R+ S ++L+R+V ++GRIP+ I P +
Sbjct: 160 DDLDNNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAE 219
Query: 76 KPVCNWAVKFSNAIGTAVRESFSIRCASIRDVPTDCKELVKSRLMKHFDLDLSKTVMIRF 135
KP+ AV+FS AIG VR++F +RC DV + E+VK L + F LD + M RF
Sbjct: 220 KPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRLFVLDFNDQAMNRF 279
Query: 136 LARQMQNIFKEYRANLHRHYKKYDTPEE 160
+ QM FKE+RA+ HRH+KKY PEE
Sbjct: 280 VEHQMLTTFKEFRADCHRHFKKYSDPEE 307
BLAST of Spg021457 vs. NCBI nr
Match:
TYK18843.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 111.3 bits (277), Expect = 8.8e-21
Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 0
Query: 16 DDEDLGQLGQTLSAGETSDGNSTTNRT----TRSYSLNIKLDRYVVLHGRIPIEIDPNLK 75
DD D G + S G+ + G+S+ T R+ S ++L+R+V ++GRIP+ I P +
Sbjct: 124 DDLDNNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAE 183
Query: 76 KPVCNWAVKFSNAIGTAVRESFSIRCASIRDVPTDCKELVKSRLMKHFDLDLSKTVMIRF 135
KP+ AV+FS AIG VR++F +RC DV + E+VK L + F LD + M RF
Sbjct: 184 KPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRLFVLDFNDQAMNRF 243
Query: 136 LARQMQNIFKEYRANLHRHYKKYDTPEE 160
+ QM FKE+RA+ HRH+KKY PEE
Sbjct: 244 VEHQMLTTFKEFRADCHRHFKKYSDPEE 271
BLAST of Spg021457 vs. NCBI nr
Match:
TYK11230.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 111.3 bits (277), Expect = 8.8e-21
Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 0
Query: 16 DDEDLGQLGQTLSAGETSDGNSTTNRT----TRSYSLNIKLDRYVVLHGRIPIEIDPNLK 75
DD D G + S G+ + G+S+ T R+ S ++L+R+V ++GRIP+ I P +
Sbjct: 12 DDLDNNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAE 71
Query: 76 KPVCNWAVKFSNAIGTAVRESFSIRCASIRDVPTDCKELVKSRLMKHFDLDLSKTVMIRF 135
KP+ AV+FS AIG VR++F +RC DV + E+VK L + F LD + M RF
Sbjct: 72 KPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRLFVLDFNDQAMNRF 131
Query: 136 LARQMQNIFKEYRANLHRHYKKYDTPEE 160
+ QM FKE+RA+ HRH+KKY PEE
Sbjct: 132 VEHQMLTTFKEFRADCHRHFKKYSDPEE 159
BLAST of Spg021457 vs. ExPASy TrEMBL
Match:
A0A5D3CIP7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00760 PE=4 SV=1)
HSP 1 Score: 111.3 bits (277), Expect = 4.3e-21
Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 0
Query: 16 DDEDLGQLGQTLSAGETSDGNSTTNRT----TRSYSLNIKLDRYVVLHGRIPIEIDPNLK 75
DD D G + S G+ + G+S+ T R+ S ++L+R+V ++GRIP+ I P +
Sbjct: 12 DDLDNNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAE 71
Query: 76 KPVCNWAVKFSNAIGTAVRESFSIRCASIRDVPTDCKELVKSRLMKHFDLDLSKTVMIRF 135
KP+ AV+FS AIG VR++F +RC DV + E+VK L + F LD + M RF
Sbjct: 72 KPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRLFVLDFNDQAMNRF 131
Query: 136 LARQMQNIFKEYRANLHRHYKKYDTPEE 160
+ QM FKE+RA+ HRH+KKY PEE
Sbjct: 132 VEHQMLTTFKEFRADCHRHFKKYSDPEE 159
BLAST of Spg021457 vs. ExPASy TrEMBL
Match:
A0A5D3D5L1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00360 PE=4 SV=1)
HSP 1 Score: 111.3 bits (277), Expect = 4.3e-21
Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 0
Query: 16 DDEDLGQLGQTLSAGETSDGNSTTNRT----TRSYSLNIKLDRYVVLHGRIPIEIDPNLK 75
DD D G + S G+ + G+S+ T R+ S ++L+R+V ++GRIP+ I P +
Sbjct: 124 DDLDNNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAE 183
Query: 76 KPVCNWAVKFSNAIGTAVRESFSIRCASIRDVPTDCKELVKSRLMKHFDLDLSKTVMIRF 135
KP+ AV+FS AIG VR++F +RC DV + E+VK L + F LD + M RF
Sbjct: 184 KPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRLFVLDFNDQAMNRF 243
Query: 136 LARQMQNIFKEYRANLHRHYKKYDTPEE 160
+ QM FKE+RA+ HRH+KKY PEE
Sbjct: 244 VEHQMLTTFKEFRADCHRHFKKYSDPEE 271
BLAST of Spg021457 vs. ExPASy TrEMBL
Match:
A0A5D3DD39 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold305G00290 PE=4 SV=1)
HSP 1 Score: 111.3 bits (277), Expect = 4.3e-21
Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 0
Query: 16 DDEDLGQLGQTLSAGETSDGNSTTNRT----TRSYSLNIKLDRYVVLHGRIPIEIDPNLK 75
DD D G + S G+ + G+S+ T R+ S ++L+R+V ++GRIP+ I P +
Sbjct: 160 DDLDNNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAE 219
Query: 76 KPVCNWAVKFSNAIGTAVRESFSIRCASIRDVPTDCKELVKSRLMKHFDLDLSKTVMIRF 135
KP+ AV+FS AIG VR++F +RC DV + E+VK L + F LD + M RF
Sbjct: 220 KPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRLFVLDFNDQAMNRF 279
Query: 136 LARQMQNIFKEYRANLHRHYKKYDTPEE 160
+ QM FKE+RA+ HRH+KKY PEE
Sbjct: 280 VEHQMLTTFKEFRADCHRHFKKYSDPEE 307
BLAST of Spg021457 vs. ExPASy TrEMBL
Match:
A0A5A7V1K5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00500 PE=4 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 5.6e-21
Identity = 61/148 (41.22%), Postives = 89/148 (60.14%), Query Frame = 0
Query: 16 DDEDLGQLGQTLSAGETSDGNSTTNRT----TRSYSLNIKLDRYVVLHGRIPIEIDPNLK 75
DD D G + S G+ + G+S+ T R+ S ++L+R+V ++GRIP+ I P +
Sbjct: 12 DDLDNNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAE 71
Query: 76 KPVCNWAVKFSNAIGTAVRESFSIRCASIRDVPTDCKELVKSRLMKHFDLDLSKTVMIRF 135
KP+ AV+FS AIG VR++F +RC DV + E+VK L + F LD + M RF
Sbjct: 72 KPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRF 131
Query: 136 LARQMQNIFKEYRANLHRHYKKYDTPEE 160
+ QM FKE+RA+ H+H+KKY PEE
Sbjct: 132 VEHQMLTTFKEFRADCHKHFKKYSDPEE 159
BLAST of Spg021457 vs. ExPASy TrEMBL
Match:
A0A5D3D3W5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001010 PE=4 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 5.6e-21
Identity = 61/148 (41.22%), Postives = 89/148 (60.14%), Query Frame = 0
Query: 16 DDEDLGQLGQTLSAGETSDGNSTTNRT----TRSYSLNIKLDRYVVLHGRIPIEIDPNLK 75
DD D G + S G+ + G+S+ T R+ S ++L+R+V ++GRIP+ I P +
Sbjct: 12 DDLDNNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAE 71
Query: 76 KPVCNWAVKFSNAIGTAVRESFSIRCASIRDVPTDCKELVKSRLMKHFDLDLSKTVMIRF 135
KP+ AV+FS AIG VR++F +RC DV + E+VK L + F LD + M RF
Sbjct: 72 KPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRF 131
Query: 136 LARQMQNIFKEYRANLHRHYKKYDTPEE 160
+ QM FKE+RA+ H+H+KKY PEE
Sbjct: 132 VEHQMLTTFKEFRADCHKHFKKYSDPEE 159
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038902987.1 | 2.4e-26 | 44.30 | uncharacterized protein LOC120089695 [Benincasa hispida] | [more] |
| XP_038887409.1 | 1.2e-22 | 41.61 | poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida] | [more] |
| TYK21492.1 | 8.8e-21 | 41.89 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] | [more] |
| TYK18843.1 | 8.8e-21 | 41.89 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] | [more] |
| TYK11230.1 | 8.8e-21 | 41.89 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CIP7 | 4.3e-21 | 41.89 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5D3D5L1 | 4.3e-21 | 41.89 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5D3DD39 | 4.3e-21 | 41.89 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5A7V1K5 | 5.6e-21 | 41.22 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5D3D3W5 | 5.6e-21 | 41.22 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
