Spg021101 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg021101
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold9: 3542591 .. 3546890 (-)
RNA-Seq ExpressionSpg021101
SyntenySpg021101
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACCCATGGTTTGCCAATGCATGAAAGGTTTACCTAGGGAAGTGAGTATCATTCTGAGTTTGTGAACTTTGCTCGTAGCTAGATATTTTCACCACAAAGTGTCGATAAGCTAGAACGAAGGGAGAGATGACAGCAAGGATGCTCTTGGGAGAAAAAAGAAGTTGAATAAAAAGAGCACTGATAGTCAAATAAGTTTGGGGGAGATAGAAAAGGTCTAGTCATTCATATATGCTCATGTTTTTCTTCAAGATTATTTTTTTGAACTAAAAGGACTACACTAGGCTCTATGAGCAGAAGTTATGTAGTTTAAGCACATTGGTTAGGATGGATGAGAGAGTTTTGCTTTGAAAAAGAACCATAGAAATCTTCATGCCTAGGAAACTCAGACGTTGTGACTGGCACTAGAGTAGAACCCTCTCCTGAAAGGTGAACTTTTTAGAAAACGATCTTGAAATACTTGTTTATTTGATTCCATGTCACTTGATTTGAGAGGAAAAGTTGATACTAGTACCATGATTGATTACTATACATGATCTCTAACATTTTGATTCGCAATTAATATTGAGCTCTTATATTCTGATTTGCAAGTGAAAAGTTGATCTCTAACATTCTGATTGGCTATTGCTTGAGGACAAGCAATGAGTTAAGTTTGGGGGTATGATAAGGGTCAAAAATATACCTATTTTGCCCTTATTTTTAGCTCATTTCTTGGTCAAATGTTAAGTGTTTAGGTCAATTTTACTATTTCCGAGCCCAAAATGTGTTGATTTGATAAGATAGGGTGTTGAGAGTCACTTTTGTTGATTTATGCTCATTTATGCCTAAAACGACTTGATTTGAAGCAAATTTGACTTAGTTGCTGTTGTGCAGAAAAACAGAGTAGAAGCTGGAATTCCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAAATGAAATGTGACCGCATTTCTGGAAAACAGAGGTCGTTCCGAGTCGCATGCGGGTCGTTGTTGACGAGTCTTCTTCGCACCTAACTGGCTGTTTTGACCCCAAAACTGACTGGGCAACCTTCCAGCACCTATTTCGCAGCTCAACCACTTTCTACACTATATAAGCTCGAGATTCGAAGTCAAATCCAAGCAGAACTCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGATGCCAATGAGTAAGGATGCCCGAGGTCCTTCTTAGATGACCAAATTCTAACCCGAGAGAGAGTTAGACATCAAGCCTTGTGGTTTATAGAGAGTTTCACCCATTCCCATCTTGTAAAAGTGAGAGAGTGGAGTGTCTTAGCGAACTCTAGAAGGATTGTGTAAACAAAAAACTCATAATATTTAGCTATCTCCTTTATTCCCAGCTCTTGATTCTTTTCATTGCTTTGTATTATTTACATTCTTATTTCAATGAAAATGTGTTCATTTGCTTTTTATCCCATCATGAGTAGCTAAATCCCGTTGAGGGGTTCAATGTGGTGAATTCCCTTATGGTTTAATGGCTTGAAAGTGTTTTATTTGCTTAAGTTGTGTCCAATGCATGTCATTCTTTATTGATTATCACTCTAATCTTACTGAGTTTAACTTGATCACTTAGACTTTGCATGCTATGTGAGTTTGATCTCGAAATGGACAAACAATATCGGTTCTCATAAAGGTGATATAGGAGAAAAAGCTCGAAAGAGATTGTTCGGCGGTATAGAGCAAGCTGCCTAAGGCACTCTATATCGACTATAGGGTTATAGGTTGTATTCGTGAATTATCTATGTCGGAGTCGAGTCCCAGAAATGGGCATAATGGTAACTCGCTTAGCCTTCTAACGGTTTTTGGAAACAAAGGTCAAATGGAAGTTAAATCTGACCCAATGCATTGAATACACTTAAGTTAGATATTGCATAAGTATGATTGTTTCCTTAGGGATGAATCCATGTTGAATACCTCGTTTGTTTATTAGTGTTATTCTTTATTATTTACTTGCTAGTTTTATTTATCTTTTCAAAAACCTAATCAATCAACTTATTTTCTTTGGTTTTTCTTATTCAAATCTGAGTTCCAATTTAGTCCTCGTGGGATCGATACCCTTGGAATGCTTCTGAGGTTTTTTTATTACTACGTGCGACAGTGTATACTTGCACTTAAGTGTTGGCTAAATATTTCTTTATTATTCCATTTATCATCTTAATTCACATTCATCTATTCAGTTCACACACGCACCAACTACTCATAAACTTTTATTTGAAGAATAGTTAAAATTTAAAAAAGACGAAATTATAAAAAGTACCCCTAAGCTATGGGGTTTGTTTCAAAAATGCCCTTGAACTTTGAATAGTTTCAAAAATACACGTGAACTTTAAAAAATGTTTAAAAAATACCCTTGCCGTTAAATTTTGGATGAAAACCGCTAAAGTTTCCGTTTCAAAAATACCCTTGAACTTTCAAAAGAGTTTCAAAAATACCCTTATTTGAAAATGCTTTTGTAATGACCCGACTTCTTACAAGAGTCTTTTCGGGACCGTTACGACATGCATGCTTTTTAGAGACCTTTTTAAATAAAAACATTTTATAACATAAATACTAATTTAAGTAAAAACCTCAAAACAAAACTTTTATTCGGGATCCCTGATTTTAAAGGTTTTAAATATTTTTAAGTAATTTCCAAACTACAAACATACATGACCTCTAAAAATTTCTCAATCAATTTTACAAAATCAAAATAAATTAAAACGAAGTTCTTAAAGCGGAAGAAAATAAAATATGAAGTTCATAGCCCTCTCATGGCTGCCTAACGCATTCTCATCAGTCGCCTTGCACCTGAACTTGCCTTTACCTGAAAAAAAAACATTTTTGAAAAGAATGAGTATTTAAAATACTCAGTAAGTGACCTTACTGTTGAGGTTGGGTCACGCTTAAACACGTTTTCTAAATTCAACAACAAACATATTTTTGAGGCTCTAAATTTTATTTTAAACTTATTAACTATGTGATATATATCAATTTCATGCATATTCTGGACACATCAATTTCATGTGTCACCTACGAAGGTCGTCAATTTCACGAACCTCGACTTAGGTACATCAATTTCATGTCCCTAAGTCCTGTGTAGGCATCTCTTTAAGTACATCAATTTCATGTACACTTTCAAAATTTAAGAAAACTTATAATTCATTTAAACTCATACATATTACAAAATTTTGAGAGACCACCAACTCGAGATTTTCAAAACTCAACGAATGCAAACATTAATAACAAATTTCATGCTTTCAACAATTTTCATAAACGTATACGTATTCAAACAACTCATAAAGCACAAGAATTTTTGGAAAATCAAACACGCGCTCCTAATTAAAAAGTTCAGCAATAAAGTCACTTACCTTGGCTTATAAATCCTTAATTTAAACTCCAATTTAACTCCAACAATGCCGATCATGACCACGAACCAACCAATCTAATTCACACGCAAGAATCTAAAATTTAGAGGCATTCAACTTCAATCACTTCTATTAGACCCAACTTAGTTAAAGAGATTGAAACTTACACAAACAAAGTCGACGCTTGCTGCCCAAGTTCTAAATCGACTTAATTTCAACAATCCAAGATCTATTCTCTATGGATGACTAAAATCAAGACCCAATCCAACATGGGTATTTCATTGTGAGGAAAAATCAATTCAAAATTGCTTTAAAATTCACTTACCCATGACCGATCTCACTCGAAATTGAAGGAATTCAAAGACCCACTGCACAAATCACCAACAAAAATGAATAGGTATTCGATTAAACTCCCAAATCAACCTCAAACCTTGCTGAAAATTACTTACCTTGTGCCAAAATCGTTGGAAATCAAAGGAACTTAAAGACCCACTGCTCAATCTTGCGGAAACGCTCAAAGGAGAAAAACCCACTCAAAACAGTTGCTGGCCGCCCACTGTAGGTGCTGAAATCTGCTGAAAACCCACAAAAAACGTGACCATCCCGCTACAGCAACCACACCCACGCGAAAAACGGTGCTGGAAATCGCCCAACAACTGTTGCCTTCGTCGGAAAACACGCACAGAGGCCGAATTTGCTGCTGCAATCTCGCCGACGCGCCGCCGCACGCACTGCCGTTGCACCGCCGTGCCGTGAAGGAGACGTTCCGCCGGCCCTTGCTGCAGTGAGCGACGCGAGAGAGAGGGCCGAAGCTGCCGGAGAAAGTGCTGAAAATAAACTCAAGAAGATAGGGAGAGAAGAGCTCCAAAATCGTGAATGGAGAAGGAGGGAAGAAGATGATGGCTTAGATGGCTCCTTTTAG

mRNA sequence

ATGACACCCATGGTTTGCCAATGCATGAAAGGTTTACCTAGGGAAAAAAACAGAGTAGAAGCTGGAATTCCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAAATGAAATGTGACCGCATTTCTGGAAAACAGAGCACCTATTTCGCAGCTCAACCACTTTCTACACTATATAAGCTCGAGATTCGAAGTCAAATCCAAGCAGAACTCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGATGCCAATGACAACCACACCCACGCGAAAAACGGTGCTGGAAATCGCCCAACAACTGTTGCCTTCGTCGGAAAACACGCACAGAGGCCGAATTTGCTGCTGCAATCTCGCCGACGCGCCGCCGCACGCACTGCCGTTGCACCGCCGTGCCGTGAAGGAGACGTTCCGCCGGCCCTTGCTGCAGTGAGCGACGCGAGAGAGAGGGCCGAAGCTGCCGGAGAAAGTGCTGAAAATAAACTCAAGAAGATAGGGAGAGAAGAGCTCCAAAATCGTGAATGGAGAAGGAGGGAAGAAGATGATGGCTTAGATGGCTCCTTTTAG

Coding sequence (CDS)

ATGACACCCATGGTTTGCCAATGCATGAAAGGTTTACCTAGGGAAAAAAACAGAGTAGAAGCTGGAATTCCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAAATGAAATGTGACCGCATTTCTGGAAAACAGAGCACCTATTTCGCAGCTCAACCACTTTCTACACTATATAAGCTCGAGATTCGAAGTCAAATCCAAGCAGAACTCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGATGCCAATGACAACCACACCCACGCGAAAAACGGTGCTGGAAATCGCCCAACAACTGTTGCCTTCGTCGGAAAACACGCACAGAGGCCGAATTTGCTGCTGCAATCTCGCCGACGCGCCGCCGCACGCACTGCCGTTGCACCGCCGTGCCGTGAAGGAGACGTTCCGCCGGCCCTTGCTGCAGTGAGCGACGCGAGAGAGAGGGCCGAAGCTGCCGGAGAAAGTGCTGAAAATAAACTCAAGAAGATAGGGAGAGAAGAGCTCCAAAATCGTGAATGGAGAAGGAGGGAAGAAGATGATGGCTTAGATGGCTCCTTTTAG

Protein sequence

MTPMVCQCMKGLPREKNRVEAGIPQKCDRISGKAKMKCDRISGKQSTYFAAQPLSTLYKLEIRSQIQAELTWKKRVVTEPWLDANDNHTHAKNGAGNRPTTVAFVGKHAQRPNLLLQSRRRAAARTAVAPPCREGDVPPALAAVSDARERAEAAGESAENKLKKIGREELQNREWRRREEDDGLDGSF
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..188

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg021101.1Spg021101.1mRNA