Spg021052 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg021052
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ethylene-responsive transcription factor ERF021-like
Location	scaffold9: 3608225 .. 3608857 (-)
RNA-Seq Expression	Spg021052
Synteny	Spg021052

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATAAACGGAATCCATGGTTCAAAGAAATCGCAGTATAGAGGCGTTGGTCGAAAGACGTACGGGAATTGGACAGCGAAGATTCAGCACAATGGCAAGCAGATATGGTTGGGAACTTACGAGGACGAGGAAAAGGCGGCGATGGCCTTCGACGTGGCCGCCTATTACCTCAGATGCAGGCAGTCGAAACTCAACTTTCCGGGACGTGTCAAAAGCCACCCCTCATTCCCACCCGGCTGCAATGCCAAACAGATTGCGGCAGCCATAAAAAATGCTGCGAACAGGTTGTTACCGGTCACCGGCAGGCTTCATACTGAGGAGAACTGGGGTTCGGTTTTACTATCCACCAACAACGGCAGTTGGATGTCTTCATGGTCGCAACTAACGTTAGAGTTCATCAGATCCCCAGCTCCTTTGGACGTCGCCGCTAAACTCAACTTTCCAGAGCGTGTCGAGAGCCTCCCCTCACTCCCACCCAGCTCCACTGAAGAAGAGATCAAGACCGCGGCTAGGGAAGCAGCACTTCGTCCCCTGGCAACAGCCGCGGATGGCGATGGAGCTCTCTATGAGAATGGGGAATGGGATTGGGAGGGCGGTTTGGAAGCCATTGAAATGTTTCCATGGCAATAG

mRNA sequence

ATGTCGATAAACGGAATCCATGGTTCAAAGAAATCGCAGTATAGAGGCGTTGGTCGAAAGACGTACGGGAATTGGACAGCGAAGATTCAGCACAATGGCAAGCAGATATGGTTGGGAACTTACGAGGACGAGGAAAAGGCGGCGATGGCCTTCGACGTGGCCGCCTATTACCTCAGATGCAGGCAGTCGAAACTCAACTTTCCGGGACGTGTCAAAAGCCACCCCTCATTCCCACCCGGCTGCAATGCCAAACAGATTGCGGCAGCCATAAAAAATGCTGCGAACAGGTTGTTACCGGTCACCGGCAGGCTTCATACTGAGGAGAACTGGGGTTCGGTTTTACTATCCACCAACAACGGCAGTTGGATGTCTTCATGGTCGCAACTAACGTTAGAGTTCATCAGATCCCCAGCTCCTTTGGACGTCGCCGCTAAACTCAACTTTCCAGAGCGTGTCGAGAGCCTCCCCTCACTCCCACCCAGCTCCACTGAAGAAGAGATCAAGACCGCGGCTAGGGAAGCAGCACTTCGTCCCCTGGCAACAGCCGCGGATGGCGATGGAGCTCTCTATGAGAATGGGGAATGGGATTGGGAGGGCGGTTTGGAAGCCATTGAAATGTTTCCATGGCAATAG

Coding sequence (CDS)

ATGTCGATAAACGGAATCCATGGTTCAAAGAAATCGCAGTATAGAGGCGTTGGTCGAAAGACGTACGGGAATTGGACAGCGAAGATTCAGCACAATGGCAAGCAGATATGGTTGGGAACTTACGAGGACGAGGAAAAGGCGGCGATGGCCTTCGACGTGGCCGCCTATTACCTCAGATGCAGGCAGTCGAAACTCAACTTTCCGGGACGTGTCAAAAGCCACCCCTCATTCCCACCCGGCTGCAATGCCAAACAGATTGCGGCAGCCATAAAAAATGCTGCGAACAGGTTGTTACCGGTCACCGGCAGGCTTCATACTGAGGAGAACTGGGGTTCGGTTTTACTATCCACCAACAACGGCAGTTGGATGTCTTCATGGTCGCAACTAACGTTAGAGTTCATCAGATCCCCAGCTCCTTTGGACGTCGCCGCTAAACTCAACTTTCCAGAGCGTGTCGAGAGCCTCCCCTCACTCCCACCCAGCTCCACTGAAGAAGAGATCAAGACCGCGGCTAGGGAAGCAGCACTTCGTCCCCTGGCAACAGCCGCGGATGGCGATGGAGCTCTCTATGAGAATGGGGAATGGGATTGGGAGGGCGGTTTGGAAGCCATTGAAATGTTTCCATGGCAATAG

Protein sequence

MSINGIHGSKKSQYRGVGRKTYGNWTAKIQHNGKQIWLGTYEDEEKAAMAFDVAAYYLRCRQSKLNFPGRVKSHPSFPPGCNAKQIAAAIKNAANRLLPVTGRLHTEENWGSVLLSTNNGSWMSSWSQLTLEFIRSPAPLDVAAKLNFPERVESLPSLPPSSTEEEIKTAAREAALRPLATAADGDGALYENGEWDWEGGLEAIEMFPWQ

Homology

[Close]

BLAST of Spg021052 vs. NCBI nr
Match: GAY59529.1 (hypothetical protein CUMW_195160 [Citrus unshiu])

HSP 1 Score: 86.3 bits (212), Expect = 3.5e-13
Identity = 51/122 (41.80%), Postives = 71/122 (58.20%), Query Frame = 0


Query: 2   SINGIHGSKKSQYRGVGRKTYGNWTAKIQHNG--KQIWLGTYEDEEKAAMAFDVAAYYLR 61
           S+N  HG   S YRGV ++ +G W ++I+  G   +IWLG++E  E+AA A+DVAA + R
Sbjct: 5   SLNSFHGGTSSSYRGVRKRKWGKWVSEIREPGTKSRIWLGSFETAERAAAAYDVAALHFR 64

Query: 62  CRQSKLNFPGRVKSHPSFPPGCNAKQIAAAIKNAANRLLPVTGRLHTEENWGSVLLSTNN 121
            R+++LNFP  V S P  P   NA+ I  A   AA RL   +    +EE  G    ST+ 
Sbjct: 65  GREARLNFPELVTSLPK-PASSNAEDIRMAAHEAALRLGNTSAGSTSEEAGGG---STSG 122

[Close]

BLAST of Spg021052 vs. NCBI nr
Match: XP_024045509.1 (ethylene-responsive transcription factor ERF021 [Citrus clementina] >KDO51736.1 hypothetical protein CISIN_1g035756mg [Citrus sinensis])

HSP 1 Score: 85.9 bits (211), Expect = 4.6e-13
Identity = 51/122 (41.80%), Postives = 70/122 (57.38%), Query Frame = 0


Query: 2   SINGIHGSKKSQYRGVGRKTYGNWTAKIQHNG--KQIWLGTYEDEEKAAMAFDVAAYYLR 61
           S+N  HG   S YRGV ++ +G W ++I+  G   +IWLG++E  E AA A+DVAA + R
Sbjct: 5   SLNSFHGGTSSSYRGVRKRKWGKWVSEIREPGTKSRIWLGSFETAEMAAAAYDVAALHFR 64

Query: 62  CRQSKLNFPGRVKSHPSFPPGCNAKQIAAAIKNAANRLLPVTGRLHTEENWGSVLLSTNN 121
            R+++LNFP  V S P  P   NA+ I  A   AA RL   +    +EE  G    ST+ 
Sbjct: 65  GREARLNFPELVTSLPK-PASSNAEDIRMAAHEAALRLRNTSAGSTSEEAGGG---STSG 122

[Close]

BLAST of Spg021052 vs. NCBI nr
Match: XP_006478382.1 (ethylene-responsive transcription factor ERF021-like [Citrus sinensis])

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-12
Identity = 50/120 (41.67%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 4   NGIHGSKKSQYRGVGRKTYGNWTAKIQHNG--KQIWLGTYEDEEKAAMAFDVAAYYLRCR 63
           N  HG   S YRGV ++ +G W ++I+  G   +IWLG++E  E+AA A+DVAA + R R
Sbjct: 7   NSFHGGTSSSYRGVRKRKWGKWVSEIREPGTKSRIWLGSFETAERAAAAYDVAALHFRGR 66

Query: 64  QSKLNFPGRVKSHPSFPPGCNAKQIAAAIKNAANRLLPVTGRLHTEENWGSVLLSTNNGS 122
           +++LNFP  V S P  P   NA+ I  A   AA RL   +    +EE  G    ST+ GS
Sbjct: 67  EARLNFPELVTSLPK-PASSNAEDIRMAAHEAALRLGNTSAGSTSEEAGGG---STSGGS 122

[Close]

BLAST of Spg021052 vs. NCBI nr
Match: ESR54885.1 (hypothetical protein CICLE_v10023857mg [Citrus clementina])

HSP 1 Score: 82.0 bits (201), Expect = 6.6e-12
Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 4   NGIHGSKKSQYRGVGRKTYGNWTAKIQHNG--KQIWLGTYEDEEKAAMAFDVAAYYLRCR 63
           N  HG   S YRGV ++ +G W ++I+  G   +IWLG++E  E AA A+DVAA + R R
Sbjct: 10  NYFHGGTSSSYRGVRKRKWGKWVSEIREPGTKSRIWLGSFETAEMAAAAYDVAALHFRGR 69

Query: 64  QSKLNFPGRVKSHPSFPPGCNAKQIAAAIKNAANRLLPVTGRLHTEENWGSVLLSTNNGS 122
           +++LNFP  V S P  P   NA+ I  A   AA RL   +    +EE  G    ST+ GS
Sbjct: 70  EARLNFPELVTSLPK-PASSNAEDIRMAAHEAALRLRNTSAGSTSEEAGGG---STSGGS 125

[Close]

BLAST of Spg021052 vs. NCBI nr
Match: RYR44838.1 (hypothetical protein Ahy_A08g041116 isoform D [Arachis hypogaea])

HSP 1 Score: 81.6 bits (200), Expect = 8.6e-12
Identity = 46/134 (34.33%), Postives = 72/134 (53.73%), Query Frame = 0


Query: 2   SINGIHGSKKSQYRGVGRKTYGNWTAKIQHNGK--QIWLGTYEDEEKAAMAFDVAAYYLR 61
           +IN + G++   YRGV ++ +G W ++I+   K  +IWLG++   E AA A+DVAAY+L+
Sbjct: 23  TINRVGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPSPEMAAKAYDVAAYFLK 82

Query: 62  CRQSKLNFPGRVKSHPSFPP--GCNAKQIAAAIKNAANRLLPVTGRLHT----EENWGSV 121
            R+++LNFP  V   P  PP   C A+ I AA   AA+         ++    ++ WG +
Sbjct: 83  GRKAQLNFPDEVHRLPPLPPPSSCTARDIQAAAAKAAHMAAAAAAAANSSSDGDDFWGEI 142

Query: 122 LLSTNNGSWMSSWS 128
            L          WS
Sbjct: 143 ELPELMNDGECRWS 156

[Close]

BLAST of Spg021052 vs. ExPASy Swiss-Prot
Match: Q9LQ28 (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana OX=3702 GN=ERF022 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.2e-12
Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 14  YRGVGRKTYGNWTAKIQHNGK--QIWLGTYEDEEKAAMAFDVAAYYLRCRQSKLNFPGRV 73
           YRG+ R+ +G W ++I+  GK  +IWLG+YE  E AA A+D AA +LR R + LNFP  V
Sbjct: 20  YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELV 79

Query: 74  KSHPSFPPGCNAKQIAAAIKNAANRLLPVTGRL 105
            S P  P   +++ I AA ++AA    P  GRL
Sbjct: 80  DSFPR-PESSSSEHIQAAAQDAALMFKP--GRL 109

[Close]

BLAST of Spg021052 vs. ExPASy Swiss-Prot
Match: Q9C7W2 (Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana OX=3702 GN=ERF061 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.6e-11
Identity = 55/177 (31.07%), Postives = 83/177 (46.89%), Query Frame = 0


Query: 10  KKSQYRGVGRKTYGNWTAKIQ--HNGKQIWLGTYEDEEKAAMAFDVAAYYLRCRQSKLNF 69
           KK  YRGV ++ +G W A+I+   N  ++WLGTY+  E AA A+D AAY LR   ++LNF
Sbjct: 132 KKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNF 191

Query: 70  PGRVKSHPSFPPGCNAKQIAAAIKNAAN-RLLPVTGRLHTEENWGSVLLSTNNGSWMSSW 129
           P      PS   G        A+KNA + ++  +  R+  E    SV +S N+ +   S 
Sbjct: 192 PN--LKDPSELLGLGDSSKLIALKNAVDGKIQSICQRVRKERAKKSVKVSKNSSATADSS 251

Query: 130 SQLTLEFIRSP-----------------APLDVAAKLNFPERVESLPSLPPSSTEEE 167
              + E + S                  +P+ +    N      S+PS  P++ EEE
Sbjct: 252 CLSSPEILSSSPVTTTTTAVTSEDSYWVSPMGLCNSENSSPVSVSVPSEVPATAEEE 306

[Close]

BLAST of Spg021052 vs. ExPASy Swiss-Prot
Match: Q40476 (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-10
Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 14  YRGVGRKTYGNWTAKIQ---HNGKQIWLGTYEDEEKAAMAFDVAAYYLRCRQSKLNFPGR 73
           YRGV R+ +G + A+I+    NG ++WLGTYE +E+AA+A+D AAY +R  ++ LNFP R
Sbjct: 105 YRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHR 164

Query: 74  VKSHPSFPPGCNAKQIAA 89
           +  +   P    AK+ A+
Sbjct: 165 IGLNEPEPVRVTAKRRAS 182

[Close]

BLAST of Spg021052 vs. ExPASy Swiss-Prot
Match: Q70II3 (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 4.9e-10
Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 10  KKSQYRGVGRKTYGNWTAKIQ--HNGKQIWLGTYEDEEKAAMAFDVAAYYLRCRQSKLNF 69
           KK +YRGV ++ +G W A+I+  H   ++WLGT++  E AA A+D AA   R  ++KLNF
Sbjct: 73  KKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNF 132

Query: 70  PGRVKSHPSFPP 80
           P  V+  P  PP
Sbjct: 133 PEDVRILPPPPP 144

[Close]

BLAST of Spg021052 vs. ExPASy Swiss-Prot
Match: Q9C9I2 (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana OX=3702 GN=ERF021 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.9e-10
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 12  SQYRGVGRKTYGNWTAKIQHNG--KQIWLGTYEDEEKAAMAFDVAAYYLRCRQSKLNFPG 71
           S YRGV ++ +G W ++I+  G   +IWLG++E  E AA A+DVAA++ R R+++LNFP 
Sbjct: 22  SAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPE 81

Query: 72  RVKSHPSFPPGCNAKQIAAAIKNA 94
              S P  P   ++  I  A+  A
Sbjct: 82  LASSLPR-PADSSSDSIRMAVHEA 104

[Close]

BLAST of Spg021052 vs. ExPASy TrEMBL
Match: A0A2H5Q4F6 (AP2/ERF domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_195160 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.7e-13
Identity = 51/122 (41.80%), Postives = 71/122 (58.20%), Query Frame = 0


Query: 2   SINGIHGSKKSQYRGVGRKTYGNWTAKIQHNG--KQIWLGTYEDEEKAAMAFDVAAYYLR 61
           S+N  HG   S YRGV ++ +G W ++I+  G   +IWLG++E  E+AA A+DVAA + R
Sbjct: 5   SLNSFHGGTSSSYRGVRKRKWGKWVSEIREPGTKSRIWLGSFETAERAAAAYDVAALHFR 64

Query: 62  CRQSKLNFPGRVKSHPSFPPGCNAKQIAAAIKNAANRLLPVTGRLHTEENWGSVLLSTNN 121
            R+++LNFP  V S P  P   NA+ I  A   AA RL   +    +EE  G    ST+ 
Sbjct: 65  GREARLNFPELVTSLPK-PASSNAEDIRMAAHEAALRLGNTSAGSTSEEAGGG---STSG 122

[Close]

BLAST of Spg021052 vs. ExPASy TrEMBL
Match: A0A067ELE6 (AP2/ERF domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035756mg PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-13
Identity = 51/122 (41.80%), Postives = 70/122 (57.38%), Query Frame = 0


Query: 2   SINGIHGSKKSQYRGVGRKTYGNWTAKIQHNG--KQIWLGTYEDEEKAAMAFDVAAYYLR 61
           S+N  HG   S YRGV ++ +G W ++I+  G   +IWLG++E  E AA A+DVAA + R
Sbjct: 5   SLNSFHGGTSSSYRGVRKRKWGKWVSEIREPGTKSRIWLGSFETAEMAAAAYDVAALHFR 64

Query: 62  CRQSKLNFPGRVKSHPSFPPGCNAKQIAAAIKNAANRLLPVTGRLHTEENWGSVLLSTNN 121
            R+++LNFP  V S P  P   NA+ I  A   AA RL   +    +EE  G    ST+ 
Sbjct: 65  GREARLNFPELVTSLPK-PASSNAEDIRMAAHEAALRLRNTSAGSTSEEAGGG---STSG 122

[Close]

BLAST of Spg021052 vs. ExPASy TrEMBL
Match: V4TT43 (AP2/ERF domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10023857mg PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.2e-12
Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 4   NGIHGSKKSQYRGVGRKTYGNWTAKIQHNG--KQIWLGTYEDEEKAAMAFDVAAYYLRCR 63
           N  HG   S YRGV ++ +G W ++I+  G   +IWLG++E  E AA A+DVAA + R R
Sbjct: 10  NYFHGGTSSSYRGVRKRKWGKWVSEIREPGTKSRIWLGSFETAEMAAAAYDVAALHFRGR 69

Query: 64  QSKLNFPGRVKSHPSFPPGCNAKQIAAAIKNAANRLLPVTGRLHTEENWGSVLLSTNNGS 122
           +++LNFP  V S P  P   NA+ I  A   AA RL   +    +EE  G    ST+ GS
Sbjct: 70  EARLNFPELVTSLPK-PASSNAEDIRMAAHEAALRLRNTSAGSTSEEAGGG---STSGGS 125

[Close]

BLAST of Spg021052 vs. ExPASy TrEMBL
Match: A0A445C1Q4 (AP2/ERF domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A08g041116 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.2e-12
Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 0


Query: 2   SINGIHGSKKSQYRGVGRKTYGNWTAKIQHNGK--QIWLGTYEDEEKAAMAFDVAAYYLR 61
           +IN + G++   YRGV ++ +G W ++I+   K  +IWLG++   E AA A+DVAAY+L+
Sbjct: 23  TINRVGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPSPEMAAKAYDVAAYFLK 82

Query: 62  CRQSKLNFPGRVKSHPSFPP--GCNAKQIAAAIKNAANRLLPVTGRLHTEEN-----WGS 121
            R+++LNFP  V   P  PP   C A+ I AA   AA+          T ++     WG 
Sbjct: 83  GRKAQLNFPDEVHRLPPLPPPSSCTARDIQAAAAKAAHMAAAAAAAAVTADDAGDDFWGE 142

Query: 122 VLLSTNNGSWMSSWS 128
           + L          WS
Sbjct: 143 IELPELMNDGECRWS 157

[Close]

BLAST of Spg021052 vs. ExPASy TrEMBL
Match: A0A445C1P1 (AP2/ERF domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A08g041116 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.2e-12
Identity = 46/134 (34.33%), Postives = 72/134 (53.73%), Query Frame = 0


Query: 2   SINGIHGSKKSQYRGVGRKTYGNWTAKIQHNGK--QIWLGTYEDEEKAAMAFDVAAYYLR 61
           +IN + G++   YRGV ++ +G W ++I+   K  +IWLG++   E AA A+DVAAY+L+
Sbjct: 23  TINRVGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPSPEMAAKAYDVAAYFLK 82

Query: 62  CRQSKLNFPGRVKSHPSFPP--GCNAKQIAAAIKNAANRLLPVTGRLHT----EENWGSV 121
            R+++LNFP  V   P  PP   C A+ I AA   AA+         ++    ++ WG +
Sbjct: 83  GRKAQLNFPDEVHRLPPLPPPSSCTARDIQAAAAKAAHMAAAAAAAANSSSDGDDFWGEI 142

Query: 122 LLSTNNGSWMSSWS 128
            L          WS
Sbjct: 143 ELPELMNDGECRWS 156

[Close]

BLAST of Spg021052 vs. TAIR 10
Match: AT1G33760.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 3.7e-13
Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 14  YRGVGRKTYGNWTAKIQHNGK--QIWLGTYEDEEKAAMAFDVAAYYLRCRQSKLNFPGRV 73
           YRG+ R+ +G W ++I+  GK  +IWLG+YE  E AA A+D AA +LR R + LNFP  V
Sbjct: 20  YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELV 79

Query: 74  KSHPSFPPGCNAKQIAAAIKNAANRLLPVTGRL 105
            S P  P   +++ I AA ++AA    P  GRL
Sbjct: 80  DSFPR-PESSSSEHIQAAAQDAALMFKP--GRL 109

[Close]

BLAST of Spg021052 vs. TAIR 10
Match: AT1G64380.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 5.4e-12
Identity = 55/177 (31.07%), Postives = 83/177 (46.89%), Query Frame = 0


Query: 10  KKSQYRGVGRKTYGNWTAKIQ--HNGKQIWLGTYEDEEKAAMAFDVAAYYLRCRQSKLNF 69
           KK  YRGV ++ +G W A+I+   N  ++WLGTY+  E AA A+D AAY LR   ++LNF
Sbjct: 132 KKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNF 191

Query: 70  PGRVKSHPSFPPGCNAKQIAAAIKNAAN-RLLPVTGRLHTEENWGSVLLSTNNGSWMSSW 129
           P      PS   G        A+KNA + ++  +  R+  E    SV +S N+ +   S 
Sbjct: 192 PN--LKDPSELLGLGDSSKLIALKNAVDGKIQSICQRVRKERAKKSVKVSKNSSATADSS 251

Query: 130 SQLTLEFIRSP-----------------APLDVAAKLNFPERVESLPSLPPSSTEEE 167
              + E + S                  +P+ +    N      S+PS  P++ EEE
Sbjct: 252 CLSSPEILSSSPVTTTTTAVTSEDSYWVSPMGLCNSENSSPVSVSVPSEVPATAEEE 306

[Close]

BLAST of Spg021052 vs. TAIR 10
Match: AT1G71450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-11
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 12  SQYRGVGRKTYGNWTAKIQHNG--KQIWLGTYEDEEKAAMAFDVAAYYLRCRQSKLNFPG 71
           S YRGV ++ +G W ++I+  G   +IWLG++E  E AA A+DVAA++ R R+++LNFP 
Sbjct: 22  SAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPE 81

Query: 72  RVKSHPSFPPGCNAKQIAAAIKNA 94
              S P  P   ++  I  A+  A
Sbjct: 82  LASSLPR-PADSSSDSIRMAVHEA 104

[Close]

BLAST of Spg021052 vs. TAIR 10
Match: AT5G50080.1 (ethylene response factor 110 )

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-11
Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 10  KKSQYRGVGRKTYGNWTAKIQ--HNGKQIWLGTYEDEEKAAMAFDVAAYYLRCRQSKLNF 69
           KK +YRGV ++ +G W A+I+  H   ++WLGT++  E AA A+D AA   R  ++KLNF
Sbjct: 73  KKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNF 132

Query: 70  PGRVKSHPSFPP 80
           P  V+  P  PP
Sbjct: 133 PEDVRILPPPPP 144

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BLAST of Spg021052 vs. TAIR 10
Match: AT2G47520.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.0e-11
Identity = 31/80 (38.75%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 10  KKSQYRGVGRKTYGNWTAKIQ--HNGKQIWLGTYEDEEKAAMAFDVAAYYLRCRQSKLNF 69
           +K+ YRG+ ++ +G W A+I+    G ++WLGT++  ++AA A+DVAA  +R R++KLNF
Sbjct: 46  RKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNF 105

Query: 70  PG-RVKSHPSFPPGCNAKQI 87
           P  +V+      PG N  ++
Sbjct: 106 PNTQVEEEADTKPGGNQNEL 125

The following BLAST results are available for this feature:

BLAST of Spg021052 vs. NCBI nr


Match Name	E-value	Identity	Description
GAY59529.1	3.5e-13	41.80	hypothetical protein CUMW_195160 [Citrus unshiu]	[more]
XP_024045509.1	4.6e-13	41.80	ethylene-responsive transcription factor ERF021 [Citrus clementina] >KDO51736.1 ...	[more]
XP_006478382.1	2.3e-12	41.67	ethylene-responsive transcription factor ERF021-like [Citrus sinensis]	[more]
ESR54885.1	6.6e-12	41.67	hypothetical protein CICLE_v10023857mg [Citrus clementina]	[more]
RYR44838.1	8.6e-12	34.33	hypothetical protein Ahy_A08g041116 isoform D [Arachis hypogaea]	[more]

BLAST of Spg021052 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQ28	5.2e-12	45.16	Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9C7W2	7.6e-11	31.07	Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q40476	2.9e-10	43.59	Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 ...	[more]
Q70II3	4.9e-10	44.44	Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9C9I2	4.9e-10	40.48	Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Spg021052 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2H5Q4F6	1.7e-13	41.80	AP2/ERF domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_195160 PE=4 ...	[more]
A0A067ELE6	2.2e-13	41.80	AP2/ERF domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035756mg...	[more]
V4TT43	3.2e-12	41.67	AP2/ERF domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v100238...	[more]
A0A445C1Q4	4.2e-12	34.81	AP2/ERF domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A08g041116 ...	[more]
A0A445C1P1	4.2e-12	34.33	AP2/ERF domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A08g041116 ...	[more]

BLAST of Spg021052 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33760.1	3.7e-13	45.16	Integrase-type DNA-binding superfamily protein	[more]
AT1G64380.1	5.4e-12	31.07	Integrase-type DNA-binding superfamily protein	[more]
AT1G71450.1	3.5e-11	40.48	Integrase-type DNA-binding superfamily protein	[more]
AT5G50080.1	3.5e-11	44.44	ethylene response factor 110	[more]
AT2G47520.1	6.0e-11	38.75	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 34..50 score: 49.52 coord: 14..25 score: 44.09
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 13..74 e-value: 1.2E-15 score: 68.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 13..59 e-value: 6.2E-6 score: 26.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 13..68 score: 17.977968
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 12..68 e-value: 4.76019E-15 score: 64.9855
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 12..69 e-value: 1.5E-18 score: 68.7
None	No IPR available	PANTHER	PTHR31985:SF111	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF021	coord: 143..182 coord: 8..107
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 143..182 coord: 8..107
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 12..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg021052.1	Spg021052.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity