Spg021030 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg021030
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold9: 572457 .. 578448 (-)
RNA-Seq ExpressionSpg021030
SyntenySpg021030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTTAAGAGCCAGGGGCAACAAACCTTTTCTTTGTGCATTTGCTCAGCTATCATATGATGTTAAAAGCATAACTCTACAGGATTGTGCTCATTTTTGTGGGGTAGCTGAAAGCTGTTACCATCGACATCTTTGGGAGATCGCCTTAATCTGTGAGTCTAGCTTCCGATCATCTTTTTCGTAATACAGGAACAAGCCCAATGCCTTTTGTATCAATCGAGTAATTAAGGCTTATTCTCTTAGCTCAGTTCCTCTAGAGGCTGTGTTTTTGTATTTTGAATGGCTTGGTAATGGATTTCGGCCAGATACGTACACTTTTCTGTCACTTTTTTGTGCTTGTGCGAGTGTTGGCTGTGGGGCGTCTGGGCGGAAGTGCCATGGACAGGCTTTCGAGAATGGGGTTGACTGTGTGATGGTTTTGAGGAATAGTTTGATTCATATGTATGGCTGTTGTGGGGATATTGAGCTCGGTCGGAAGGTGTTCGATGAAATGTCGACCCGGGATTTGGTATCTTGGAATTCGATTGTTACTGCTTATGCAAGAGTTGGTGATTTGCATACTGCCCATGACATGTTTGATACAATGCCTGAGAGAAATGTTGTCTCTTGGAATTTGATGATTAGTGAGTATTTGAGAGGTGGGAATCCTGGCTGTGCAATGAAGTTGTTTAGGAAAATGGTGACGATAGGAATTAGAGGGAACAACACGACGATGGTGAATGTTCTTGGTGCTTGTGGTCGATCGGCCAGGCTGAATGAAGGAAGATCGGTTCATGGTTTTATGTACCGAGCTTCGGTGGAGTTTTGTATATTTATCGAACTAACCCACTCTCTGGCATGTATAGCAAATGCCAGAGAGTGCATTGATTGACATGTATAGCAAATGCCAGAGAGTATCGATAAATATACAAAACTCCACCGAAGCTCGGATCCATGCTGGCAGCTATGGATCAAAATGTATGCTTTTCTTAAAGCATCCTCCAGCTGCTCAAGAGGCTCTCGAGTCTCTGGATATTTCTTCAGCTCTATGATTTTGAGTTGATCCAGTAAGTTCCCAATCAACTTGAGATGCTGTGCAAATTGCTTACAGTTCTTCTTGTGCATCCTTGCGGTGTTTGCTGCTCTTACAATCATTGAAATCAGCTGAACTGCGTTGATACCCGTTAGTTGGGCAACACCCGTGACGTCCCCAAGACTATCCCACGAAGACATACTTGAGCCTAAATGTCCTTAGGAACGCCACTGTCCATGACCCCCCAGAATTTCCAAATTGCTGATCATGAAAGTCGCCAATTCAAGATTCCCTTTCCTAAACAGCACAAGTTGGTCTCTGGAATCTTTGAGGAATAATCTCTTGATTATACCAGAAAATTTAGGGATCTTAATTTCGAGTAGCCAGTTCTAAATGAAATCATTTGCATTAATAATGGCTTCGATGAATATGTATTTTTTAACTTGATTCTTGAGCTGAAGCTATATGCATTGCCTTGAATGGAAACCTCCCTGCAAGATCATCACGGTAACGTCATCTTCATCGAAAGATCGTTAACTTTTAGAAGTTCAAATATCTGGCACGCAATTTTCAGCTGCACACAAAATGATCCGAATAATTGCTAGGCAAACTTCCAAGAAGAACAAAAACATAAAACTACACACACATACACAAATGTTTAAAAATAACAATCTCGAAACGACATTACAAATTCGCAATATCTTCATGATTATGACGAGCTTTTCGGCAAATGACACGAAACGGAAAAAAAAAATAAAAACAAAGAAGACTGAAACGGAAAAGAGAAGAGAACACATGTAATGCTCGTCCAAGGAAGACTAGAGTGATAGGCCACCCACTACAAAAACAAAGCAAATAAGTCTCCAAGCATTTATTGACAATCTTGGTTTGACTGTAGGTTCGGGGTGTTGGGTTAGGTGTCCTAAAACTCGTAGATAGTGAATGATAAACGAATTATATACTTATTCGATAAAAGCGTTATCGAGACTAATTCAGTAAAGTTATTACTAAATAAAGTAAATTGCACTTATAATTACCCAAATCCAATAAACTAAGATCCATGGCTATAGGATGAACTCTTGAGCTTTATGTAGAGACATAAAAGTGGATCAAGCTTAAGTAATAGCCAAAACGGTCTATAGTATAGGAATAGGGTTGGGTACCTTATTCTGGGGACACTATGAGACGCGGCCCACTTTATAGATGGTATAGACGATGTGATCCTAAATCGTCCATGTAGAGACATGCGAGTGGGGGCGTCCTATGTAATGAGTTTGCATAAGACCAGGACCAAGAAATAAGTCACTCTCGCTTTATAACACCGTTTACTGACGAGACTGACTATTTCATGTGATGACCTAGGTAACTCGATCTTAATCCTGAGCTAACTATGAACTCCTGTTTATTCGGGCTTATCCTTAGATCTGCATAGGTGAGAGTGGCTCAGTATCGCCGACTCAATAAGCCTCCCATTTCAGGGATAGGAACGGGTAGATAGCTGGGGACATAATCGTGCAAGAAGGAATTCACTCCTACCCGAATTAGGGATAGTAGAGAGGTTGTTCCCTTAAGTGCTGACTCCGGGGCTTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGAGAGGGACTCGGTTTATTGGTTGGACCATAAACCAATTGTTCATTAGAGGATCAGTGAGACTTAAGGAACTAGAAGTACTATAGGGGTAAAACGGCTTATTGACCTAGTTATAGCTACGAACAACCTGTGAAGGATCGACTTACTAATCATGGTTAAATCAAGTGGACAGAAATATATCTATAGTGAGGGGAGTGCAACTATCGGGCTATAGTGGAGTGCCCCGGTAGTTAACGAATGTTGGCTAGCTTGGATAATGAGATTAGTCGGTTAGCCTCGAATCGTTGGAGCCCATGATCTATAGGTCCATTAGGTCCCCCTACTAGCTCATATCGGAATTAAGCCTAGAACAAAAGATAGGAAGCTTTGAATCGTTCAAAATCGGGAAAAAAAAAGGGTATTATCATAAATTGTGTTTGACACAATAATTTAATTATGAATTAAATTAGAAAATGAGAGATGAAGTATTTAAAAGTTTTTTTGAATACTATATATATGTATTAGGAATCATATATATGGAATTGCACAAGATAACAAAGATTAATTAGATTAATCATATCAAAATTAATTTGAAAATTTTCAAATTAATTACCAAGCAATCAATTTCAATTTAGAATTGGGGATAATTTGCAAGCTTGAAATTTGATTTCAATTTGAATTTAGTGGATTTAGTTGGAAATCCATTTAATGCATGATCATTCAAAGTGGAAAGACAACTCACTCATGCATTGTTGCATGTCTTGTGAGATGTACACCTAGAATCCACTTGAACTTGCAAATACACCATGTGTCTTGTGTCTTGAGGCTTGGCTTTGCATGGAGAATGTCTTTAAAAGGAGCTTGAATCAAATTAAAAGGGTTGAGAGCCATTTTTCCTTAATGTTATGCTGCTGGAATTTGGACTCAAAGTTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAGCATTCCCTTCCCATTCCCTATCTTATATAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATAGTAGGGAAGACTCTAGAGGTTGTCCAAGGAGCATAGGAGAGGCAAACACCACAAGGAGTTCAACATAAGTGAGCTACAAAGGTTGGTGTTTTCTAAACTCTCTATTCTGTCTTTTCTAGAACATGCATGCTTTAGGAGTAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTAATATGTACACCTTCAATTGGTATCAGAGCATGATTAGAGCACTTAATTCGTTTTAATTTTGCTTTGGTGGGTACCATTTTGAAATTGAATTTTCTGTGTGCTAAAATGGAAGTGTTCTGGTTTGGCAATTTTTTGAGCATTCAAACCTTCATGAAATTGTAATTGCTCGGATATGTAAGAGCGTTAATGTGTGTACTATAGTCTGTAATTTTTATAGAGTCATTAGAGTCCATATAGGCTGTAAAATCGAAGAAAAACCGGAGAAGACGCAGCAGAAAATGAAAATTCCAGCAAGCTGTTTTTTTTTTTAATTCCAGCAGCAGATTTTTTCCCCCTTCTTCTTTTCCAGTCCGGTTCGGTTTGTTTGCAGCCGGTTCAGCCCCTATACACACTTTTGAAGGCCGGTTCACTCCATGAAGGGTTGGTTCGAGTCGGTTCGTGAAGCTCGAGATTGATTCAAGCAATTTTTTATTAATTATTATTGTAATAATTAGTTAATTGTTTGTTTTTGGATTGCCAAACCATTCCATTTTAGCTTGATTTAATTTCTTTATGCATTGTGAATGTATGATTTAATTAAATGATTGTATGTGCATTATGAGCATGCCATATAGATTAAAATCCCACCATAGGAAAGCATGTTCATGCATTTTTAATTTTAATAAGTGTTATTGATTAATTCAAATACTTGAGGGAAATTTCATGGTTAATTAATATAAGAGTTGTATTAATTTAGGGAGATTCATGCTTGAATGGTTAATTAAAATTGATTAATTATTATAATAGTTATAATTATTAAAAGATAAAATTAACCAAGCATGTAGCATGAAATTTCTTTAGTTTGTTTATAAGTGTTATATTCAAATTAGACTTGTTATGGATTGATTTTATAATTGTTATAAAAAGAGATAGAAATCTAAAATCTATAACAAGATTAAGTGCATGCTCACTTAGGTTAATGAACCTTCAACGATTCGATCAATTTGCATAGTTTAGGTCGATATCTTGTAAAACAACGGTTACAAGAGAACTCACCCGACAAGATGCTGTCTAAGGCTGGAGGTATTTAAGTTGACGGTTTACGGAACACCTCCTACCTGGGCATCGAGTCGGTTCTTGAGTTAAGTTAACTCGAGTTTTATGAGCATGCGTGAGCGGTGTGAGGTTTTAAAGTGTTATCACCTAGACATCGTAGTATAAAGTGTTATACAAACCTAGACATAGGTTGTTTCTAAAGGGTGCTTTTCTTATAACTTGAATGATTGATTGTTATATGCTTTAAAACACCATTAGAAAGCATGTTATAGGGTTTATTCATTAAAAGTTATAAGAGTTATAAAAGTTGATGAATAGAAACCGTAAAATCTATAACAAAGAGTTGCATGCTAACATAGGATCTTAGGATCTTGTCATTCTTTAAATGGTTTAAAATGAAGTAGACCTAAGATCGCCTTTTCTAATAGGATTAGAAATATGTCTTACTTAGTTTTTAAAATAGTTTTAAAAATTCGAGTAAGTAGGACATAAGACCTTGGTTATAAGGGAACTCTCCCGACAAATGGTTCGGAACCTGAGTTGAATTAACCATAGTCTTACTAGCATGCAATGTCACTAGGTTATTAAAAGTGTTTAATCACCTAGACATTTAGTGTAAAGACCTTGTTTAATAAGGCATAGACTTATAGATTCATTTAGCCGGAATTTACCTAAGTAATAAGACCCTAAAACTTTACAACACTTTAGTGGGAGGAAAAGTATAGAAACGAAATATTCATATTAAGTTTCTACTCTCACGTCCCCTTGAGTTCACACCGTGAGATCCATGCTTGGCCTCGAGGCGCCTTGGGAGCGTCCCCCTACGGATGGTGTTTGCATGGGTTAATATCAAGGTGAATGGGGAAAGTGTTCATAGTAAGTGGGAGAAGGAAACGTGTCAAACGTATCCTGCGGTCTCCATCATTAGGTTGCACCGTGAGATTCCTATGCGCTGCCTGCGAGTCGCCCTGGGAGCGATCACCCTACGGAGGGCTTGCGCATGGGATTCGGAACAACGCAAACTCCAGAAATGGATAGGGTTTCCTAGGGCCATTCCCAACACGATTGGGCACCCTACGGAGGGCTTGCGCATGGGAACGAACGTGATTGGGCACCCTTAA

mRNA sequence

ATGAGCTTAAGAGCCAGGGGCAACAAACCTTTTCTTTGTGCATTTGCTCAGCTATCATATGATGTTAAAAGCATAACTCTACAGGATTGTGCTCATTTTTGTGGGGTAGCTGAAAGCTGTTACCATCGACATCTTTGGGAGATCGCCTTAATCTTAATTAAGGCTTATTCTCTTAGCTCAGTTCCTCTAGAGGCTGTGTTTTTGTATTTTGAATGGCTTGGTAATGGATTTCGGCCAGATACGTACACTTTTCTGTCACTTTTTTGTGCTTGTGCGAGTGTTGGCTGTGGGGCGTCTGGGCGGAAGTGCCATGGACAGGCTTTCGAGAATGGGGTTGACTGTGTGATGGTTTTGAGGAATAGTTTGATTCATATGTATGGCTGTTGTGGGGATATTGAGCTCGGTCGGAAGGTGTTCGATGAAATGTCGACCCGGGATTTGGTATCTTGGAATTCGATTGTTACTGCTTATGCAAGAGTTGGTGATTTGCATACTGCCCATGACATGTTTGATACAATGCCTGAGAGAAATGTTGTCTCTTGGAATTTGATGATTAGTGAGTATTTGAGAGGTGGGAATCCTGGCTGTGCAATGAAGTTGTTTAGGAAAATGGTGACGATAGGAATTAGAGGGAACAACACGACGATGGTGAATGTTCTTGGTGCTTGTGGTCGATCGGCCAGGCTGAATGAAGGAAGATCGGTTCATGGTTTTATGTACCGAGCTTCGGTGGAGTTTTGTATATTTATCGAACTAACCCACTCTCTGGCATGTATAGCAAATGCCAGAGACATCCTCCAGCTGCTCAAGAGGCTCTCGAGTCTCTGGATATTTCTTCAGCTCTATGATTTTGAGTTGATCCATTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAGCATTCCCTTCCCATTCCCTATCTTATATAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATAGTAGGGAAGACTCTAGAGAACATGCATGCTTTAGGAGTAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTCCGGTTCAGCCCCTATACACACTTTTGAAGGCCGGTTCACTCCATGAAGGGTTGGTTCGAGTCGATCCATGCTTGGCCTCGAGGCGCCTTGGGAGCGTCCCCCTACGGATGGTGTTTGCATGGGTTAATATCAAGGTGAATGGGGAAAGTGTTCATAGTAAGTGGGAGAAGGAAACGTGTCAAACGTATCCTGCGGTCTCCATCATTAGGTTGCACCGTGAGATTCCTATGCGCTGCCTGCGAGTCGCCCTGGGAGCGATCACCCTACGGAGGGCTTGCGCATGGGATTCGGAACAACGCAAACTCCAGAAATGGATAGGGTTTCCTAGGGCCATTCCCAACACGATTGGGCACCCTACGGAGGGCTTGCGCATGGGAACGAACGTGATTGGGCACCCTTAA

Coding sequence (CDS)

ATGAGCTTAAGAGCCAGGGGCAACAAACCTTTTCTTTGTGCATTTGCTCAGCTATCATATGATGTTAAAAGCATAACTCTACAGGATTGTGCTCATTTTTGTGGGGTAGCTGAAAGCTGTTACCATCGACATCTTTGGGAGATCGCCTTAATCTTAATTAAGGCTTATTCTCTTAGCTCAGTTCCTCTAGAGGCTGTGTTTTTGTATTTTGAATGGCTTGGTAATGGATTTCGGCCAGATACGTACACTTTTCTGTCACTTTTTTGTGCTTGTGCGAGTGTTGGCTGTGGGGCGTCTGGGCGGAAGTGCCATGGACAGGCTTTCGAGAATGGGGTTGACTGTGTGATGGTTTTGAGGAATAGTTTGATTCATATGTATGGCTGTTGTGGGGATATTGAGCTCGGTCGGAAGGTGTTCGATGAAATGTCGACCCGGGATTTGGTATCTTGGAATTCGATTGTTACTGCTTATGCAAGAGTTGGTGATTTGCATACTGCCCATGACATGTTTGATACAATGCCTGAGAGAAATGTTGTCTCTTGGAATTTGATGATTAGTGAGTATTTGAGAGGTGGGAATCCTGGCTGTGCAATGAAGTTGTTTAGGAAAATGGTGACGATAGGAATTAGAGGGAACAACACGACGATGGTGAATGTTCTTGGTGCTTGTGGTCGATCGGCCAGGCTGAATGAAGGAAGATCGGTTCATGGTTTTATGTACCGAGCTTCGGTGGAGTTTTGTATATTTATCGAACTAACCCACTCTCTGGCATGTATAGCAAATGCCAGAGACATCCTCCAGCTGCTCAAGAGGCTCTCGAGTCTCTGGATATTTCTTCAGCTCTATGATTTTGAGTTGATCCATTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAGCATTCCCTTCCCATTCCCTATCTTATATAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATAGTAGGGAAGACTCTAGAGAACATGCATGCTTTAGGAGTAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTCCGGTTCAGCCCCTATACACACTTTTGAAGGCCGGTTCACTCCATGAAGGGTTGGTTCGAGTCGATCCATGCTTGGCCTCGAGGCGCCTTGGGAGCGTCCCCCTACGGATGGTGTTTGCATGGGTTAATATCAAGGTGAATGGGGAAAGTGTTCATAGTAAGTGGGAGAAGGAAACGTGTCAAACGTATCCTGCGGTCTCCATCATTAGGTTGCACCGTGAGATTCCTATGCGCTGCCTGCGAGTCGCCCTGGGAGCGATCACCCTACGGAGGGCTTGCGCATGGGATTCGGAACAACGCAAACTCCAGAAATGGATAGGGTTTCCTAGGGCCATTCCCAACACGATTGGGCACCCTACGGAGGGCTTGCGCATGGGAACGAACGTGATTGGGCACCCTTAA

Protein sequence

MSLRARGNKPFLCAFAQLSYDVKSITLQDCAHFCGVAESCYHRHLWEIALILIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENGVDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFDTMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNEGRSVHGFMYRASVEFCIFIELTHSLACIANARDILQLLKRLSSLWIFLQLYDFELIHSLISHSSPLLDASSIPFPFPILYRLPQVVLGPEYSREDSREHACFRSKIECLKCFRSSIASACPVQPLYTLLKAGSLHEGLVRVDPCLASRRLGSVPLRMVFAWVNIKVNGESVHSKWEKETCQTYPAVSIIRLHREIPMRCLRVALGAITLRRACAWDSEQRKLQKWIGFPRAIPNTIGHPTEGLRMGTNVIGHP
Homology
[Close]
BLAST of Spg021030 vs. NCBI nr
Match: XP_022132890.1 (pentatricopeptide repeat-containing protein At3g51320 [Momordica charantia])

HSP 1 Score: 391.0 bits (1003), Expect = 1.5e-104
Identity = 181/200 (90.50%), Postives = 192/200 (96.00%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           ++KAYSLS+VP EAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAF+NG
Sbjct: 113 VLKAYSLSTVPQEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFKNG 172

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
           VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMS RDLVSWNSIVTAYAR+GDLHTAHD+FD
Sbjct: 173 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSARDLVSWNSIVTAYARIGDLHTAHDLFD 232

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            MPERNVVSWNLMI EYLRGGNPGCAMKLFR MV +GIRGN+TTMVNVLGAC RSARLNE
Sbjct: 233 EMPERNVVSWNLMIGEYLRGGNPGCAMKLFRIMVKMGIRGNSTTMVNVLGACSRSARLNE 292

Query: 232 GRSVHGFMYRASVEFCIFIE 252
           GRSVHGFMYRA ++FCIFI+
Sbjct: 293 GRSVHGFMYRALMKFCIFID 312

[Close]
BLAST of Spg021030 vs. NCBI nr
Match: XP_023544621.1 (pentatricopeptide repeat-containing protein At3g51320 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388.7 bits (997), Expect = 7.6e-104
Identity = 178/200 (89.00%), Postives = 193/200 (96.50%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           +IKAYSLSSVPLEAVF+YF+WLG+GFRPDTYTFLSLFCACAS+GCG+SGRKCHGQAF+NG
Sbjct: 85  VIKAYSLSSVPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNG 144

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
           VDCVMVLRNSLIHMY CCG IELGRKVFDEMST DLVSWNSIVTAYARVGDLHTAHDMFD
Sbjct: 145 VDCVMVLRNSLIHMYACCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLHTAHDMFD 204

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            MPERNVVSWNLMISEYLRGG+PGCAMKLFR M+ IGIRGN+TTMVN+LGACGRSARLNE
Sbjct: 205 AMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNE 264

Query: 232 GRSVHGFMYRASVEFCIFIE 252
           GRSVHGFMYR S++FC+FI+
Sbjct: 265 GRSVHGFMYRTSMKFCVFID 284

[Close]
BLAST of Spg021030 vs. NCBI nr
Match: XP_023544620.1 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388.7 bits (997), Expect = 7.6e-104
Identity = 178/200 (89.00%), Postives = 193/200 (96.50%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           +IKAYSLSSVPLEAVF+YF+WLG+GFRPDTYTFLSLFCACAS+GCG+SGRKCHGQAF+NG
Sbjct: 118 VIKAYSLSSVPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNG 177

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
           VDCVMVLRNSLIHMY CCG IELGRKVFDEMST DLVSWNSIVTAYARVGDLHTAHDMFD
Sbjct: 178 VDCVMVLRNSLIHMYACCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLHTAHDMFD 237

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            MPERNVVSWNLMISEYLRGG+PGCAMKLFR M+ IGIRGN+TTMVN+LGACGRSARLNE
Sbjct: 238 AMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNE 297

Query: 232 GRSVHGFMYRASVEFCIFIE 252
           GRSVHGFMYR S++FC+FI+
Sbjct: 298 GRSVHGFMYRTSMKFCVFID 317

[Close]
BLAST of Spg021030 vs. NCBI nr
Match: XP_022950691.1 (pentatricopeptide repeat-containing protein At3g51320 isoform X2 [Cucurbita moschata])

HSP 1 Score: 386.0 bits (990), Expect = 4.9e-103
Identity = 177/200 (88.50%), Postives = 192/200 (96.00%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           +IKAYSLSS PLEAVF+YF+WLG+GFRPDTYTFLSLFCACAS+GCG+SGRKCHGQAF+NG
Sbjct: 85  VIKAYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNG 144

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
           VDCVMVLRNSLIHMYGCCG IELGRKVFDEM T DLVSWNSIVTAYARVGDLHTAHDMFD
Sbjct: 145 VDCVMVLRNSLIHMYGCCGHIELGRKVFDEMLTLDLVSWNSIVTAYARVGDLHTAHDMFD 204

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            MPERNVVSWNLMISEYLRGG+PGCAMKLFR M+ IGIRGN+TTMVN+LGACGRSARLNE
Sbjct: 205 AMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNE 264

Query: 232 GRSVHGFMYRASVEFCIFIE 252
           GRSVHGFMYR S++FC+FI+
Sbjct: 265 GRSVHGFMYRTSMKFCVFID 284

[Close]
BLAST of Spg021030 vs. NCBI nr
Match: XP_022950690.1 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita moschata])

HSP 1 Score: 386.0 bits (990), Expect = 4.9e-103
Identity = 177/200 (88.50%), Postives = 192/200 (96.00%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           +IKAYSLSS PLEAVF+YF+WLG+GFRPDTYTFLSLFCACAS+GCG+SGRKCHGQAF+NG
Sbjct: 118 VIKAYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNG 177

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
           VDCVMVLRNSLIHMYGCCG IELGRKVFDEM T DLVSWNSIVTAYARVGDLHTAHDMFD
Sbjct: 178 VDCVMVLRNSLIHMYGCCGHIELGRKVFDEMLTLDLVSWNSIVTAYARVGDLHTAHDMFD 237

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            MPERNVVSWNLMISEYLRGG+PGCAMKLFR M+ IGIRGN+TTMVN+LGACGRSARLNE
Sbjct: 238 AMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNE 297

Query: 232 GRSVHGFMYRASVEFCIFIE 252
           GRSVHGFMYR S++FC+FI+
Sbjct: 298 GRSVHGFMYRTSMKFCVFID 317

[Close]
BLAST of Spg021030 vs. ExPASy Swiss-Prot
Match: Q0WVU0 (Pentatricopeptide repeat-containing protein At3g51320 OS=Arabidopsis thaliana OX=3702 GN=At3g51320 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.8e-55
Identity = 99/200 (49.50%), Postives = 138/200 (69.00%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           + KAY +SS P +A+  YF+ L  GF PD+YTF+SL        C  SG+ CHGQA ++G
Sbjct: 89  VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
            D V+ ++NSL+HMY CCG ++L +K+F E+  RD+VSWNSI+    R GD+  AH +FD
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            MP++N++SWN+MIS YL   NPG ++ LFR+MV  G +GN +T+V +L ACGRSARL E
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268

Query: 232 GRSVHGFMYRASVEFCIFIE 252
           GRSVH  + R  +   + I+
Sbjct: 269 GRSVHASLIRTFLNSSVVID 288

[Close]
BLAST of Spg021030 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 5.8e-30
Identity = 68/185 (36.76%), Postives = 106/185 (57.30%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           + + ++LSS P+ A+ LY   +  G  P++YTF  +  +CA       G++ HG   + G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
            D  + +  SLI MY   G +E   KVFD+   RD+VS+ +++  YA  G +  A  +FD
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD 224

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            +P ++VVSWN MIS Y   GN   A++LF+ M+   +R + +TMV V+ AC +S  +  
Sbjct: 225 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 284

Query: 232 GRSVH 237
           GR VH
Sbjct: 285 GRQVH 289

[Close]
BLAST of Spg021030 vs. ExPASy Swiss-Prot
Match: Q9SKQ4 (Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E48 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 7.5e-30
Identity = 63/181 (34.81%), Postives = 103/181 (56.91%), Query Frame = 0 

Query: 64  EAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENGVDCVMVLRNSLI 123
           EA++ Y E+  +G + + ++F  L  AC         R+ HGQ    G    +VL  S+I
Sbjct: 162 EALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSII 221

Query: 124 HMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFDTMPERNVVSWNL 183
             Y  CG +E  ++ FDEM+ +D+  W ++++ YA++GD+  A  +F  MPE+N VSW  
Sbjct: 222 DAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTA 281

Query: 184 MISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNEGRSVHGFMYRAS 243
           +I+ Y+R G+   A+ LFRKM+ +G++    T  + L A    A L  G+ +HG+M R +
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341

Query: 244 V 245
           V
Sbjct: 342 V 342

[Close]
BLAST of Spg021030 vs. ExPASy Swiss-Prot
Match: P0C8Q7 (Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E105 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.3e-29
Identity = 68/201 (33.83%), Postives = 118/201 (58.71%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           +I+ +S S  P +++ +Y + L  G  PD  T+  L  + + +     G   H    ++G
Sbjct: 79  VIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSG 138

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
           ++  + + N+LIHMYG   D    RK+FDEM  ++LV+WNSI+ AYA+ GD+ +A  +FD
Sbjct: 139 LEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFD 198

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIG-IRGNNTTMVNVLGACGRSARLN 231
            M ER+VV+W+ MI  Y++ G    A+++F +M+ +G  + N  TMV+V+ AC     LN
Sbjct: 199 EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALN 258

Query: 232 EGRSVHGFMYRASVEFCIFIE 252
            G++VH ++    +   + ++
Sbjct: 259 RGKTVHRYILDVHLPLTVILQ 279

[Close]
BLAST of Spg021030 vs. ExPASy Swiss-Prot
Match: Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-28
Identity = 71/233 (30.47%), Postives = 124/233 (53.22%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWL--GNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFE 111
           +I+ +S SS P  A+ ++ + L      +P   T+ S+F A   +G    GR+ HG   +
Sbjct: 95  IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154

Query: 112 NGVDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDM 171
            G++    +RN+++HMY  CG +    ++F  M   D+V+WNS++  +A+ G +  A ++
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214

Query: 172 FDTMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARL 231
           FD MP+RN VSWN MIS ++R G    A+ +FR+M    ++ +  TMV++L AC      
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274

Query: 232 NEGRSVHGFMYR-----ASVEFCIFIELTHSLACIANARDILQLL-KRLSSLW 277
            +GR +H ++ R      S+     I++     CI    ++ +   K+  S W
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCW 327

[Close]
BLAST of Spg021030 vs. ExPASy TrEMBL
Match: A0A6J1BTT2 (pentatricopeptide repeat-containing protein At3g51320 OS=Momordica charantia OX=3673 GN=LOC111005621 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 7.4e-105
Identity = 181/200 (90.50%), Postives = 192/200 (96.00%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           ++KAYSLS+VP EAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAF+NG
Sbjct: 113 VLKAYSLSTVPQEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFKNG 172

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
           VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMS RDLVSWNSIVTAYAR+GDLHTAHD+FD
Sbjct: 173 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSARDLVSWNSIVTAYARIGDLHTAHDLFD 232

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            MPERNVVSWNLMI EYLRGGNPGCAMKLFR MV +GIRGN+TTMVNVLGAC RSARLNE
Sbjct: 233 EMPERNVVSWNLMIGEYLRGGNPGCAMKLFRIMVKMGIRGNSTTMVNVLGACSRSARLNE 292

Query: 232 GRSVHGFMYRASVEFCIFIE 252
           GRSVHGFMYRA ++FCIFI+
Sbjct: 293 GRSVHGFMYRALMKFCIFID 312

[Close]
BLAST of Spg021030 vs. ExPASy TrEMBL
Match: A0A6J1GFI6 (pentatricopeptide repeat-containing protein At3g51320 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453712 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103
Identity = 177/200 (88.50%), Postives = 192/200 (96.00%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           +IKAYSLSS PLEAVF+YF+WLG+GFRPDTYTFLSLFCACAS+GCG+SGRKCHGQAF+NG
Sbjct: 85  VIKAYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNG 144

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
           VDCVMVLRNSLIHMYGCCG IELGRKVFDEM T DLVSWNSIVTAYARVGDLHTAHDMFD
Sbjct: 145 VDCVMVLRNSLIHMYGCCGHIELGRKVFDEMLTLDLVSWNSIVTAYARVGDLHTAHDMFD 204

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            MPERNVVSWNLMISEYLRGG+PGCAMKLFR M+ IGIRGN+TTMVN+LGACGRSARLNE
Sbjct: 205 AMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNE 264

Query: 232 GRSVHGFMYRASVEFCIFIE 252
           GRSVHGFMYR S++FC+FI+
Sbjct: 265 GRSVHGFMYRTSMKFCVFID 284

[Close]
BLAST of Spg021030 vs. ExPASy TrEMBL
Match: A0A6J1GGG4 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453712 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103
Identity = 177/200 (88.50%), Postives = 192/200 (96.00%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           +IKAYSLSS PLEAVF+YF+WLG+GFRPDTYTFLSLFCACAS+GCG+SGRKCHGQAF+NG
Sbjct: 118 VIKAYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNG 177

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
           VDCVMVLRNSLIHMYGCCG IELGRKVFDEM T DLVSWNSIVTAYARVGDLHTAHDMFD
Sbjct: 178 VDCVMVLRNSLIHMYGCCGHIELGRKVFDEMLTLDLVSWNSIVTAYARVGDLHTAHDMFD 237

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            MPERNVVSWNLMISEYLRGG+PGCAMKLFR M+ IGIRGN+TTMVN+LGACGRSARLNE
Sbjct: 238 AMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNE 297

Query: 232 GRSVHGFMYRASVEFCIFIE 252
           GRSVHGFMYR S++FC+FI+
Sbjct: 298 GRSVHGFMYRTSMKFCVFID 317

[Close]
BLAST of Spg021030 vs. ExPASy TrEMBL
Match: A0A6J1IPV8 (pentatricopeptide repeat-containing protein At3g51320 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478374 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.2e-102
Identity = 177/199 (88.94%), Postives = 190/199 (95.48%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           +IKAYSLSS PLEAVF+YF+WLG+GFRPDTYTFLSLFCACAS+GCG+SGRKCHGQAF+NG
Sbjct: 85  VIKAYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNG 144

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
           VDCVMVLRNSLIHMYGCCG IELGRKVFDEMST DLVSWNSIVTAYARVGDLHTAHDMFD
Sbjct: 145 VDCVMVLRNSLIHMYGCCGYIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLHTAHDMFD 204

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            MPERNVVSWNLMISEYLRGG+PGCAMKLFR M+ IGIRGN+TTMVN+LGACGRSA LNE
Sbjct: 205 AMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSASLNE 264

Query: 232 GRSVHGFMYRASVEFCIFI 251
           GRSVHGFMYR S +FC+FI
Sbjct: 265 GRSVHGFMYRTSTKFCVFI 283

[Close]
BLAST of Spg021030 vs. ExPASy TrEMBL
Match: A0A6J1ITV7 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478374 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.2e-102
Identity = 177/199 (88.94%), Postives = 190/199 (95.48%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           +IKAYSLSS PLEAVF+YF+WLG+GFRPDTYTFLSLFCACAS+GCG+SGRKCHGQAF+NG
Sbjct: 118 VIKAYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNG 177

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
           VDCVMVLRNSLIHMYGCCG IELGRKVFDEMST DLVSWNSIVTAYARVGDLHTAHDMFD
Sbjct: 178 VDCVMVLRNSLIHMYGCCGYIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLHTAHDMFD 237

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            MPERNVVSWNLMISEYLRGG+PGCAMKLFR M+ IGIRGN+TTMVN+LGACGRSA LNE
Sbjct: 238 AMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSASLNE 297

Query: 232 GRSVHGFMYRASVEFCIFI 251
           GRSVHGFMYR S +FC+FI
Sbjct: 298 GRSVHGFMYRTSTKFCVFI 316

[Close]
BLAST of Spg021030 vs. TAIR 10
Match: AT3G51320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 216.1 bits (549), Expect = 6.3e-56
Identity = 99/200 (49.50%), Postives = 138/200 (69.00%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           + KAY +SS P +A+  YF+ L  GF PD+YTF+SL        C  SG+ CHGQA ++G
Sbjct: 89  VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
            D V+ ++NSL+HMY CCG ++L +K+F E+  RD+VSWNSI+    R GD+  AH +FD
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            MP++N++SWN+MIS YL   NPG ++ LFR+MV  G +GN +T+V +L ACGRSARL E
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268

Query: 232 GRSVHGFMYRASVEFCIFIE 252
           GRSVH  + R  +   + I+
Sbjct: 269 GRSVHASLIRTFLNSSVVID 288

[Close]
BLAST of Spg021030 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 133.7 bits (335), Expect = 4.1e-31
Identity = 68/185 (36.76%), Postives = 106/185 (57.30%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           + + ++LSS P+ A+ LY   +  G  P++YTF  +  +CA       G++ HG   + G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
            D  + +  SLI MY   G +E   KVFD+   RD+VS+ +++  YA  G +  A  +FD
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD 224

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNE 231
            +P ++VVSWN MIS Y   GN   A++LF+ M+   +R + +TMV V+ AC +S  +  
Sbjct: 225 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 284

Query: 232 GRSVH 237
           GR VH
Sbjct: 285 GRQVH 289

[Close]
BLAST of Spg021030 vs. TAIR 10
Match: AT2G21090.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 5.4e-31
Identity = 63/181 (34.81%), Postives = 103/181 (56.91%), Query Frame = 0 

Query: 64  EAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENGVDCVMVLRNSLI 123
           EA++ Y E+  +G + + ++F  L  AC         R+ HGQ    G    +VL  S+I
Sbjct: 162 EALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSII 221

Query: 124 HMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFDTMPERNVVSWNL 183
             Y  CG +E  ++ FDEM+ +D+  W ++++ YA++GD+  A  +F  MPE+N VSW  
Sbjct: 222 DAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTA 281

Query: 184 MISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARLNEGRSVHGFMYRAS 243
           +I+ Y+R G+   A+ LFRKM+ +G++    T  + L A    A L  G+ +HG+M R +
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341

Query: 244 V 245
           V
Sbjct: 342 V 342

[Close]
BLAST of Spg021030 vs. TAIR 10
Match: AT5G08305.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 132.5 bits (332), Expect = 9.1e-31
Identity = 68/201 (33.83%), Postives = 118/201 (58.71%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFENG 111
           +I+ +S S  P +++ +Y + L  G  PD  T+  L  + + +     G   H    ++G
Sbjct: 79  VIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSG 138

Query: 112 VDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDMFD 171
           ++  + + N+LIHMYG   D    RK+FDEM  ++LV+WNSI+ AYA+ GD+ +A  +FD
Sbjct: 139 LEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFD 198

Query: 172 TMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIG-IRGNNTTMVNVLGACGRSARLN 231
            M ER+VV+W+ MI  Y++ G    A+++F +M+ +G  + N  TMV+V+ AC     LN
Sbjct: 199 EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALN 258

Query: 232 EGRSVHGFMYRASVEFCIFIE 252
            G++VH ++    +   + ++
Sbjct: 259 RGKTVHRYILDVHLPLTVILQ 279

[Close]
BLAST of Spg021030 vs. TAIR 10
Match: AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 129.0 bits (323), Expect = 1.0e-29
Identity = 71/233 (30.47%), Postives = 124/233 (53.22%), Query Frame = 0 

Query: 52  LIKAYSLSSVPLEAVFLYFEWL--GNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFE 111
           +I+ +S SS P  A+ ++ + L      +P   T+ S+F A   +G    GR+ HG   +
Sbjct: 95  IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154

Query: 112 NGVDCVMVLRNSLIHMYGCCGDIELGRKVFDEMSTRDLVSWNSIVTAYARVGDLHTAHDM 171
            G++    +RN+++HMY  CG +    ++F  M   D+V+WNS++  +A+ G +  A ++
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214

Query: 172 FDTMPERNVVSWNLMISEYLRGGNPGCAMKLFRKMVTIGIRGNNTTMVNVLGACGRSARL 231
           FD MP+RN VSWN MIS ++R G    A+ +FR+M    ++ +  TMV++L AC      
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274

Query: 232 NEGRSVHGFMYR-----ASVEFCIFIELTHSLACIANARDILQLL-KRLSSLW 277
            +GR +H ++ R      S+     I++     CI    ++ +   K+  S W
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCW 327

The following BLAST results are available for this feature:
BLAST of Spg021030 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022132890.11.5e-10490.50pentatricopeptide repeat-containing protein At3g51320 [Momordica charantia][more]
XP_023544621.17.6e-10489.00pentatricopeptide repeat-containing protein At3g51320 isoform X2 [Cucurbita pepo... [more]
XP_023544620.17.6e-10489.00pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita pepo... [more]
XP_022950691.14.9e-10388.50pentatricopeptide repeat-containing protein At3g51320 isoform X2 [Cucurbita mosc... [more]
XP_022950690.14.9e-10388.50pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita mosc... [more]
BLAST of Spg021030 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q0WVU08.8e-5549.50Pentatricopeptide repeat-containing protein At3g51320 OS=Arabidopsis thaliana OX... [more]
Q9LN015.8e-3036.76Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Q9SKQ47.5e-3034.81Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana OX... [more]
P0C8Q71.3e-2933.83Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana OX... [more]
Q9SJG61.4e-2830.47Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... [more]
BLAST of Spg021030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BTT27.4e-10590.50pentatricopeptide repeat-containing protein At3g51320 OS=Momordica charantia OX=... [more]
A0A6J1GFI62.4e-10388.50pentatricopeptide repeat-containing protein At3g51320 isoform X2 OS=Cucurbita mo... [more]
A0A6J1GGG42.4e-10388.50pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita mo... [more]
A0A6J1IPV81.2e-10288.94pentatricopeptide repeat-containing protein At3g51320 isoform X2 OS=Cucurbita ma... [more]
A0A6J1ITV71.2e-10288.94pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita ma... [more]
BLAST of Spg021030 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G51320.16.3e-5649.50Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G08070.14.1e-3136.76Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G21090.15.4e-3134.81Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G08305.19.1e-3133.83Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G42920.11.0e-2930.47Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 120..145
e-value: 0.0011
score: 19.1
coord: 179..209
e-value: 1.9E-5
score: 24.6
coord: 148..178
e-value: 2.1E-5
score: 24.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 148..179
e-value: 1.1E-5
score: 23.3
coord: 120..147
e-value: 1.8E-4
score: 19.5
coord: 179..205
e-value: 8.2E-4
score: 17.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 146..180
score: 11.081932
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 49..176
e-value: 1.3E-23
score: 85.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 177..242
e-value: 2.0E-5
score: 26.2
NoneNo IPR availablePANTHERPTHR47928:SF120OS05G0107000 PROTEINcoord: 52..251
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 52..251

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg021030.1Spg021030.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding