Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCAAGCCCATTACCTTCCTTGCAACAGGTTTTGTCTCCACATCATCAACACGTTGATCAATGGGTTATTGAAAAATTCCAAAGACTTGGAGATTCTAAAGCAAGCGGGCATCGTTTACAACCATCTAAACAGTGAAGAAGAAGCTTTGGAGCTCTTCAATGATGTCCATAATTCCATTAGTAGGTTGAAGAAAGCAAGCGTGTTGAAAATCCATCTTCAGACTGGTTTAGATATGGAGATTACAAGGGAATTCCTTCAAGACATCAACATGTACTATGATATGGGGTTGAAGAGAAAGGATGAGAAAATCAACAAAAGCTGCGAGAGATGCTGGAGATCGAAGATGAAGAAGTTTGTGTCTGTTGTTTTCAAGGGTTTTGCAATTCTTTTCATCCTCTTATTCATTGTTCTTGTGATCGCCCAATTTCTATGCCATTACTTGAGCTAG
mRNA sequence
ATGGGCCAAGCCCATTACCTTCCTTGCAACAGGTTTTGTCTCCACATCATCAACACGTTGATCAATGGGTTATTGAAAAATTCCAAAGACTTGGAGATTCTAAAGCAAGCGGGCATCGTTTACAACCATCTAAACAGTGAAGAAGAAGCTTTGGAGCTCTTCAATGATGTCCATAATTCCATTAGTAGGTTGAAGAAAGCAAGCGTGTTGAAAATCCATCTTCAGACTGGTTTAGATATGGAGATTACAAGGGAATTCCTTCAAGACATCAACATGTACTATGATATGGGGTTGAAGAGAAAGGATGAGAAAATCAACAAAAGCTGCGAGAGATGCTGGAGATCGAAGATGAAGAAGTTTGTGTCTGTTGTTTTCAAGGGTTTTGCAATTCTTTTCATCCTCTTATTCATTGTTCTTGTGATCGCCCAATTTCTATGCCATTACTTGAGCTAG
Coding sequence (CDS)
ATGGGCCAAGCCCATTACCTTCCTTGCAACAGGTTTTGTCTCCACATCATCAACACGTTGATCAATGGGTTATTGAAAAATTCCAAAGACTTGGAGATTCTAAAGCAAGCGGGCATCGTTTACAACCATCTAAACAGTGAAGAAGAAGCTTTGGAGCTCTTCAATGATGTCCATAATTCCATTAGTAGGTTGAAGAAAGCAAGCGTGTTGAAAATCCATCTTCAGACTGGTTTAGATATGGAGATTACAAGGGAATTCCTTCAAGACATCAACATGTACTATGATATGGGGTTGAAGAGAAAGGATGAGAAAATCAACAAAAGCTGCGAGAGATGCTGGAGATCGAAGATGAAGAAGTTTGTGTCTGTTGTTTTCAAGGGTTTTGCAATTCTTTTCATCCTCTTATTCATTGTTCTTGTGATCGCCCAATTTCTATGCCATTACTTGAGCTAG
Protein sequence
MGQAHYLPCNRFCLHIINTLINGLLKNSKDLEILKQAGIVYNHLNSEEEALELFNDVHNSISRLKKASVLKIHLQTGLDMEITREFLQDINMYYDMGLKRKDEKINKSCERCWRSKMKKFVSVVFKGFAILFILLFIVLVIAQFLCHYLS
Homology
BLAST of Spg020906 vs. NCBI nr
Match:
XP_038890580.1 (putative UPF0481 protein At3g02645 [Benincasa hispida])
HSP 1 Score: 157.9 bits (398), Expect = 6.8e-35
Identity = 84/138 (60.87%), Postives = 109/138 (78.99%), Query Frame = 0
Query: 13 CLHIINTLINGLLKNSKDLEILKQAGIVYNHLNSEEEALELFNDVHNSISRLKKASVLKI 72
CL +L+NGLL+NSKDL++L++AGIV+NHLNSEEEA+ELFN V NS LKK SVLKI
Sbjct: 373 CLVNYVSLMNGLLRNSKDLKVLEKAGIVHNHLNSEEEAVELFNGVENSTRSLKKESVLKI 432
Query: 73 HLQTGLDMEITREFLQDINMYYDMGLKRKDEKINKSCERCWRSKMKKFVSVVFKGFAILF 132
HL++GL+ E +F+QD+ M Y+MGL E+INK CWR KMKKF+S+VFK FAIL
Sbjct: 433 HLKSGLNFETGSKFIQDVKMSYEMGLGALAEEINKFYGNCWRMKMKKFMSIVFKCFAILL 492
Query: 133 ILLFIVLVIAQFLCHYLS 151
++ IVLVIA+F+C++LS
Sbjct: 493 VVFLIVLVIARFVCNFLS 510
BLAST of Spg020906 vs. NCBI nr
Match:
XP_022973420.1 (putative UPF0481 protein At3g02645 [Cucurbita maxima])
HSP 1 Score: 146.0 bits (367), Expect = 2.7e-31
Identity = 81/141 (57.45%), Postives = 106/141 (75.18%), Query Frame = 0
Query: 10 NRFCLHIINTLINGLLKNSKDLEILKQAGIVYNHLNSEEEALELFNDVHNSISRLKKASV 69
N CL L+ GLL+NSKDL+IL++A IV+NHL++EE+A+E+FN V NS S LKK V
Sbjct: 371 NPQCLVNYIALMKGLLRNSKDLKILEKAEIVHNHLSNEEQAVEVFNGVENSTSSLKKEEV 430
Query: 70 LKIHLQTGLDMEITREFLQDINMYYDMGLKRKDEKINKSCERCWRSKMKKFVSVVFKGFA 129
LKIHL++GLD EI F+QDI M Y+MGL E+INK CWR KMK+F+SVVFK FA
Sbjct: 431 LKIHLKSGLDCEIGSGFIQDIKMNYEMGLGSMVEEINKWYGSCWRMKMKRFMSVVFKCFA 490
Query: 130 ILFILLFIVLVIAQFLCHYLS 151
+L ++ IVLVIA+F C+++S
Sbjct: 491 VLVVVFVIVLVIARFACNFVS 511
BLAST of Spg020906 vs. NCBI nr
Match:
XP_022949095.1 (putative UPF0481 protein At3g02645 [Cucurbita moschata])
HSP 1 Score: 144.1 bits (362), Expect = 1.0e-30
Identity = 82/141 (58.16%), Postives = 104/141 (73.76%), Query Frame = 0
Query: 10 NRFCLHIINTLINGLLKNSKDLEILKQAGIVYNHLNSEEEALELFNDVHNSISRLKKASV 69
N CL L+ GLL+NSKDL+IL +A IV NHL+SEE+A+E+FN V NS S LKK V
Sbjct: 370 NPQCLVNYIALMKGLLRNSKDLKILVKAEIVDNHLSSEEQAVEVFNGVENSTSSLKKEEV 429
Query: 70 LKIHLQTGLDMEITREFLQDINMYYDMGLKRKDEKINKSCERCWRSKMKKFVSVVFKGFA 129
L IHL++GLD EI F+QDI M Y+MGL E+INK CWR KMKKF+SVVFK FA
Sbjct: 430 LNIHLKSGLDCEIGSGFIQDIKMNYEMGLGSMVEEINKWYGSCWRMKMKKFMSVVFKCFA 489
Query: 130 ILFILLFIVLVIAQFLCHYLS 151
+L ++ IVLVIA+F+C+++S
Sbjct: 490 VLVVVFVIVLVIARFVCNFVS 510
BLAST of Spg020906 vs. NCBI nr
Match:
KAG7037156.1 (GDSL esterase/lipase, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 144.1 bits (362), Expect = 1.0e-30
Identity = 82/141 (58.16%), Postives = 104/141 (73.76%), Query Frame = 0
Query: 10 NRFCLHIINTLINGLLKNSKDLEILKQAGIVYNHLNSEEEALELFNDVHNSISRLKKASV 69
N CL L+ GLL+NSKDL+IL +A IV NHL+SEE+A+E+FN V NS S LKK V
Sbjct: 732 NPQCLVNYIALMKGLLRNSKDLKILVKAEIVDNHLSSEEQAVEVFNGVENSTSSLKKEEV 791
Query: 70 LKIHLQTGLDMEITREFLQDINMYYDMGLKRKDEKINKSCERCWRSKMKKFVSVVFKGFA 129
L IHL++GLD EI F+QDI M Y+MGL E+INK CWR KMKKF+SVVFK FA
Sbjct: 792 LNIHLKSGLDCEIGSGFIQDIKMNYEMGLGSMVEEINKWYGSCWRMKMKKFMSVVFKCFA 851
Query: 130 ILFILLFIVLVIAQFLCHYLS 151
+L ++ IVLVIA+F+C+++S
Sbjct: 852 VLVVVFVIVLVIARFVCNFVS 872
BLAST of Spg020906 vs. NCBI nr
Match:
KAG6607499.1 (putative UPF0481 protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 144.1 bits (362), Expect = 1.0e-30
Identity = 82/141 (58.16%), Postives = 104/141 (73.76%), Query Frame = 0
Query: 10 NRFCLHIINTLINGLLKNSKDLEILKQAGIVYNHLNSEEEALELFNDVHNSISRLKKASV 69
N CL L+ GLL+NSKDL+IL +A IV NHL+SEE+A+E+FN V NS S LKK V
Sbjct: 373 NPQCLVNYIALMKGLLRNSKDLKILVKAEIVDNHLSSEEQAVEVFNGVENSTSSLKKEEV 432
Query: 70 LKIHLQTGLDMEITREFLQDINMYYDMGLKRKDEKINKSCERCWRSKMKKFVSVVFKGFA 129
L IHL++GLD EI F+QDI M Y+MGL E+INK CWR KMKKF+SVVFK FA
Sbjct: 433 LNIHLKSGLDCEIGSGFIQDIKMNYEMGLGSMVEEINKWYGSCWRMKMKKFMSVVFKCFA 492
Query: 130 ILFILLFIVLVIAQFLCHYLS 151
+L ++ IVLVIA+F+C+++S
Sbjct: 493 VLVVVFVIVLVIARFVCNFVS 513
BLAST of Spg020906 vs. ExPASy TrEMBL
Match:
A0A6J1IBB2 (putative UPF0481 protein At3g02645 OS=Cucurbita maxima OX=3661 GN=LOC111471968 PE=4 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 1.3e-31
Identity = 81/141 (57.45%), Postives = 106/141 (75.18%), Query Frame = 0
Query: 10 NRFCLHIINTLINGLLKNSKDLEILKQAGIVYNHLNSEEEALELFNDVHNSISRLKKASV 69
N CL L+ GLL+NSKDL+IL++A IV+NHL++EE+A+E+FN V NS S LKK V
Sbjct: 371 NPQCLVNYIALMKGLLRNSKDLKILEKAEIVHNHLSNEEQAVEVFNGVENSTSSLKKEEV 430
Query: 70 LKIHLQTGLDMEITREFLQDINMYYDMGLKRKDEKINKSCERCWRSKMKKFVSVVFKGFA 129
LKIHL++GLD EI F+QDI M Y+MGL E+INK CWR KMK+F+SVVFK FA
Sbjct: 431 LKIHLKSGLDCEIGSGFIQDIKMNYEMGLGSMVEEINKWYGSCWRMKMKRFMSVVFKCFA 490
Query: 130 ILFILLFIVLVIAQFLCHYLS 151
+L ++ IVLVIA+F C+++S
Sbjct: 491 VLVVVFVIVLVIARFACNFVS 511
BLAST of Spg020906 vs. ExPASy TrEMBL
Match:
A0A6J1GBT5 (putative UPF0481 protein At3g02645 OS=Cucurbita moschata OX=3662 GN=LOC111452550 PE=4 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 4.9e-31
Identity = 82/141 (58.16%), Postives = 104/141 (73.76%), Query Frame = 0
Query: 10 NRFCLHIINTLINGLLKNSKDLEILKQAGIVYNHLNSEEEALELFNDVHNSISRLKKASV 69
N CL L+ GLL+NSKDL+IL +A IV NHL+SEE+A+E+FN V NS S LKK V
Sbjct: 370 NPQCLVNYIALMKGLLRNSKDLKILVKAEIVDNHLSSEEQAVEVFNGVENSTSSLKKEEV 429
Query: 70 LKIHLQTGLDMEITREFLQDINMYYDMGLKRKDEKINKSCERCWRSKMKKFVSVVFKGFA 129
L IHL++GLD EI F+QDI M Y+MGL E+INK CWR KMKKF+SVVFK FA
Sbjct: 430 LNIHLKSGLDCEIGSGFIQDIKMNYEMGLGSMVEEINKWYGSCWRMKMKKFMSVVFKCFA 489
Query: 130 ILFILLFIVLVIAQFLCHYLS 151
+L ++ IVLVIA+F+C+++S
Sbjct: 490 VLVVVFVIVLVIARFVCNFVS 510
BLAST of Spg020906 vs. ExPASy TrEMBL
Match:
A0A0A0KSX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650580 PE=4 SV=1)
HSP 1 Score: 138.7 bits (348), Expect = 2.1e-29
Identity = 76/139 (54.68%), Postives = 102/139 (73.38%), Query Frame = 0
Query: 13 CLHIINTLINGLLKNSKDLEILKQAGIVYNHLNSEEEALELFNDVHNSISRLKKASVLKI 72
CL L+NGLL+NSKDL++L++A IV+NHLNSEEEA ELF V NS S+LKK S+LKI
Sbjct: 383 CLANYTALMNGLLRNSKDLKVLEKAEIVHNHLNSEEEAAELFYGVENSTSKLKKGSLLKI 442
Query: 73 HLQTGLDMEITREFLQDI-NMYYDMGLKRKDEKINKSCERCWRSKMKKFVSVVFKGFAIL 132
HL +G + E +F+Q++ + Y +MGL E+IN CWR KMKKFVSVV+K FA+L
Sbjct: 443 HLNSGFNFENGSKFIQEVESSYIEMGLGDMVERINNCYGNCWRMKMKKFVSVVYKCFAVL 502
Query: 133 FILLFIVLVIAQFLCHYLS 151
++ IVLV +F+C++LS
Sbjct: 503 VVVFLIVLVTTRFVCNFLS 521
BLAST of Spg020906 vs. ExPASy TrEMBL
Match:
A0A1S3CAN6 (putative UPF0481 protein At3g02645 OS=Cucumis melo OX=3656 GN=LOC103498704 PE=4 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 4.6e-29
Identity = 74/138 (53.62%), Postives = 98/138 (71.01%), Query Frame = 0
Query: 13 CLHIINTLINGLLKNSKDLEILKQAGIVYNHLNSEEEALELFNDVHNSISRLKKASVLKI 72
CL L+NGLL+NSKDL++L++A IV+NHLNSEEEA ELF V NS RLKK S+L+I
Sbjct: 381 CLANYTALMNGLLRNSKDLKVLEKAEIVHNHLNSEEEAAELFYGVENSTRRLKKESLLEI 440
Query: 73 HLQTGLDMEITREFLQDINMYYDMGLKRKDEKINKSCERCWRSKMKKFVSVVFKGFAILF 132
HL+ G + E F+Q++ Y+MGL E+IN CWR KMKK VSVVFK FA+L
Sbjct: 441 HLKGGFNFENGSNFIQEVESSYEMGLGNMVERINNCYGNCWRMKMKKVVSVVFKCFAVLI 500
Query: 133 ILLFIVLVIAQFLCHYLS 151
++ IVLV +F+C+++S
Sbjct: 501 VVFLIVLVTTRFVCNFMS 518
BLAST of Spg020906 vs. ExPASy TrEMBL
Match:
A0A5D3BMY1 (Putative UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00380 PE=4 SV=1)
HSP 1 Score: 133.3 bits (334), Expect = 8.6e-28
Identity = 72/138 (52.17%), Postives = 97/138 (70.29%), Query Frame = 0
Query: 13 CLHIINTLINGLLKNSKDLEILKQAGIVYNHLNSEEEALELFNDVHNSISRLKKASVLKI 72
CL L+NGLL+ SKDL++L++A IV+NHLNSEEEA ELF V NS SRLKK S+L+I
Sbjct: 381 CLANYTALMNGLLRKSKDLKVLEKAEIVHNHLNSEEEAAELFYGVENSTSRLKKESLLEI 440
Query: 73 HLQTGLDMEITREFLQDINMYYDMGLKRKDEKINKSCERCWRSKMKKFVSVVFKGFAILF 132
HL+ G + E F+ ++ Y+MGL E+IN CWR KMKK VSVV+K FA+L
Sbjct: 441 HLKGGFNFENGSNFIPEVESSYEMGLGNMVERINNCYGNCWRMKMKKVVSVVYKCFAVLV 500
Query: 133 ILLFIVLVIAQFLCHYLS 151
++ IVLV +F+C+++S
Sbjct: 501 VVFLIVLVTTRFVCNFMS 518
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038890580.1 | 6.8e-35 | 60.87 | putative UPF0481 protein At3g02645 [Benincasa hispida] | [more] |
XP_022973420.1 | 2.7e-31 | 57.45 | putative UPF0481 protein At3g02645 [Cucurbita maxima] | [more] |
XP_022949095.1 | 1.0e-30 | 58.16 | putative UPF0481 protein At3g02645 [Cucurbita moschata] | [more] |
KAG7037156.1 | 1.0e-30 | 58.16 | GDSL esterase/lipase, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6607499.1 | 1.0e-30 | 58.16 | putative UPF0481 protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1IBB2 | 1.3e-31 | 57.45 | putative UPF0481 protein At3g02645 OS=Cucurbita maxima OX=3661 GN=LOC111471968 P... | [more] |
A0A6J1GBT5 | 4.9e-31 | 58.16 | putative UPF0481 protein At3g02645 OS=Cucurbita moschata OX=3662 GN=LOC111452550... | [more] |
A0A0A0KSX9 | 2.1e-29 | 54.68 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650580 PE=4 SV=1 | [more] |
A0A1S3CAN6 | 4.6e-29 | 53.62 | putative UPF0481 protein At3g02645 OS=Cucumis melo OX=3656 GN=LOC103498704 PE=4 ... | [more] |
A0A5D3BMY1 | 8.6e-28 | 52.17 | Putative UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
Match Name | E-value | Identity | Description | |