Spg020735 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg020735
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Retrotransposon gag protein
Location	scaffold10: 26189765 .. 26192644 (-)
RNA-Seq Expression	Spg020735
Synteny	Spg020735

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCTATTGCCCATTGTTACTTCAATGAACTGAGGTTGCAAGAAGATAAAGCTTCTATCATTGCAAGCGAGGAAACAACATTGCAGGGGGCATGTACCAATGACAAGTTTCTTGTTAAGTATAACCCTTTGTTTGAACCTGATTCTGACGTAGTGACTGTTATGATGACTGAGACAAGAACAATGGAAGAAAGAATGGTTGTGATGCAGGAGCACATCAACACCTTAATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAGCACCTAAAGAGTCAGATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAACTCATAAAAAATCACGACAAAGGGGAGACTATAGTGCAAGATGATCAACCACAGTGTTCTGCTTCGATCGCTTCACTATCCATCCAACAACTCCAAGATATGATCACAAACTGTATGAGAGCTCAATATGGTGGACCTACTCAAGATTCTCTCTTGTATTCTAAACCTTATACTAAGAGGATTGATAACTTGAGAATGCCAATCGAGTATCAGCCACCAAAGTTTCAGCAATTTGATGGAAAGTGCAATCCTAAACAACATATTGCCCATTTCATTGAGACATGCGAGAACGCTGGTACTCGAGGGGACCTACTAGTCAAGCAGTTCGTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAATAGACAATTGGGAGGAATTCGAAAGAGAGTTTTTGAATCGCTTCTATAGCACCAGACGAACCGTTAGCATGTTCGAGCTCACCAACACTAAACAGCGAAAAGGTGAACTCATTATTAACTACATAAATCGTTGGAGAGCTATGAGTCTAGATTGCAAGGATCGCCTCACTGAACTCTCTGCTGTTGAGATGTGCATTCAAGGTATGCATTCGGAACTCCTCTACATCCTTCAAGGTATAAAGCCTCGCACCTTTGAAGAACTAGCAACTCACGCCCACGATATGGAGCTAAGTATTGCTAGTCAAGAAAACCAAGACCTTCTACTTCCTAACTTGAAGATAGAGGAAAAGACCGACAAAGAGATTATAGAAGAATCTATGGCTGTAAACACAATTCTTCTCAAGTCATCTTCAAAAGAAAAGCGACATGAAAATGGAACACGTCGCTTAACCTTAAAGGAAAGACAGAAGAAAATATATTCCTTCCCTGATTCTGACATTTCTGGCATGTTGGAACAACTACTAGAAGCGCAACTAATAGAGCTTCCTGAGTGTAAGCGACCGGAAGAGATTGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCAAGTTATTGGTCATCCAGTGGAAAGATGCTTTGTCCTAAAGGACTTAATTCTAAAGCTAGCTAAGAAAGGAAAAATTGAGCTTGACCTTGATGAAGTAGCTCAATCAAAGGAAAGAGCAAACATCAAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAAAGGAAGAGAAGTAAATAGTTTTCTCAACCTCAACAACTGGTGATGTTGAATAAATCCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAAAACTTTGCAACTTCCTACTACATCGACGTAGAAGAAGTTGACAATTCCAAGAAGGGTGAACAAAGGACTTCTGTCTTCAATCGCATCAAGCCTTCAACTACTCGTCCTTCTGTATTCCAAAGAATGAGTATGGCCGCATCAAAAGAAGAAAATCAATGTTCGGCGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAGATGATCAACCTCAAAGAAAGATAGATAACTTAGAGGTGAAAATGTTCAATGAAGTAAGCAGTGACAGGAAACTTCAAAGTATTGTCCCGTCACGTATGAAAAAGAAGTTCTCTGTTATCATAAATACAGAAGGTTCATTGACAGTGAAGCCAAATCTCATTATCGTGACCAATCCTACAAGTGAAGGATCTGATCCAAACAATGATGAAGATAAGAGCTTTTAAAATGTAAAAACTCCTTATTGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACATGAGCTTAAAAGGTGAGAGCACAAAAATCTTGAACTACGTTATGAATTGATCCCTATTCCATAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTCTCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGCAACAAATATTGAAGCACGACAATATAAATTGAAGAAACTAATCACTACTGGGGGCAACACAACAAATTGAAGTTGTGCACCGTTGTAAATGTGAAGTTATGAGTTGGACGAATAAAAGAAGACTTCATTCTTTCAAATTAAATGTTTCGCTTGCCTCAAAAGTTCAGTGTTCCATTCACCCTAAGTTCGTTGCTCCTTCTTCTCTCCAAGTTCGAGGGTTCTTACGATGTACGCTACTGTGTTGTTCCCTCTTCTTCAAGTTCGAAGGTTCTTACGATGTACGCTCCAAGTTCGAGGGTTCTTACGATGTACGCTACTGTGTTGTTCCCTCTTCTTCAAGTTCGAAGGTTCTCACGCGCTTCGCTACAATTCCTTCTCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCTAGCCAAGTTCGAAGGTTCTCATGCACTTCGCTCTCCAAGTTCGAAAGGTCTCACGCGCTTTGCTGTAGTTCATTCTCTTCAAGTTCACGCACTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGGCTTCGCTGCAGTTCCTCTCTCCAAGTTCGAAGGTTCTCACGCGTTTCGTTGCAGTTTCTTCCCTCCAAGTTGCAGTTCTTTCTCTCTAA

mRNA sequence

ATGGGTTCTATTGCCCATTGTTACTTCAATGAACTGAGGTTGCAAGAAGATAAAGCTTCTATCATTGCAAGCGAGGAAACAACATTGCAGGGGGCATGTACCAATGACAAGTTTCTTGTTAAGTATAACCCTTTGTTTGAACCTGATTCTGACGTAGTGACTGTTATGATGACTGAGACAAGAACAATGGAAGAAAGAATGGTTGTGATGCAGGAGCACATCAACACCTTAATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAGCACCTAAAGAAAGAAGTTGACAATTCCAAGAAGGGTGAACAAAGGACTTCTGTCTTCAATCGCATCAAGCCTTCAACTACTCGTCCTTCTGTATTCCAAAGAATGAGTATGGCCGCATCAAAAGAAGAAAATCAATGTTCGGCGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAGATGATCAACCTCAAAGAAAGATAGATAACTTAGAGGTGAAAATGTTCAATGAATTCAGTGTTCCATTCACCCTAAGTTCGTTGCTCCTTCTTCTCTCCAAGTTCGAGGGTTCTTACGATGTACGCTACTGTGTTGTTCCCTCTTCTTCAAGTTCGAAGGTTCTTACGATGTACGCTCCAAGTTCGAGGGTTCTTACGATGTACGCTACTGTGTTGTTCCCTCTTCTTCAAGTTCGAAGGTTCTCACGCGCTTCGCTACAATTCCTTCTCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCTAGCCAAGTTCGAAGGTTCTCATGCACTTCGCTCTCCAAGTTCGAAAGGTCTCACGCGCTTTGCTGTAGTTCATTCTCTTCAAGTTCACGCACTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGGCTTCGCTGCAGTTCCTCTCTCCAAGTTCGAAGGTTCTCACGCGTTTCGTTGCAGTTTCTTCCCTCCAAGTTGCAGTTCTTTCTCTCTAA

Coding sequence (CDS)

ATGGGTTCTATTGCCCATTGTTACTTCAATGAACTGAGGTTGCAAGAAGATAAAGCTTCTATCATTGCAAGCGAGGAAACAACATTGCAGGGGGCATGTACCAATGACAAGTTTCTTGTTAAGTATAACCCTTTGTTTGAACCTGATTCTGACGTAGTGACTGTTATGATGACTGAGACAAGAACAATGGAAGAAAGAATGGTTGTGATGCAGGAGCACATCAACACCTTAATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAGCACCTAAAGAAAGAAGTTGACAATTCCAAGAAGGGTGAACAAAGGACTTCTGTCTTCAATCGCATCAAGCCTTCAACTACTCGTCCTTCTGTATTCCAAAGAATGAGTATGGCCGCATCAAAAGAAGAAAATCAATGTTCGGCGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAGATGATCAACCTCAAAGAAAGATAGATAACTTAGAGGTGAAAATGTTCAATGAATTCAGTGTTCCATTCACCCTAAGTTCGTTGCTCCTTCTTCTCTCCAAGTTCGAGGGTTCTTACGATGTACGCTACTGTGTTGTTCCCTCTTCTTCAAGTTCGAAGGTTCTTACGATGTACGCTCCAAGTTCGAGGGTTCTTACGATGTACGCTACTGTGTTGTTCCCTCTTCTTCAAGTTCGAAGGTTCTCACGCGCTTCGCTACAATTCCTTCTCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCTAGCCAAGTTCGAAGGTTCTCATGCACTTCGCTCTCCAAGTTCGAAAGGTCTCACGCGCTTTGCTGTAGTTCATTCTCTTCAAGTTCACGCACTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGGCTTCGCTGCAGTTCCTCTCTCCAAGTTCGAAGGTTCTCACGCGTTTCGTTGCAGTTTCTTCCCTCCAAGTTGCAGTTCTTTCTCTCTAA

Protein sequence

MGSIAHCYFNELRLQEDKASIIASEETTLQGACTNDKFLVKYNPLFEPDSDVVTVMMTETRTMEERMVVMQEHINTLMKAIEEKDSQIEHLKKEVDNSKKGEQRTSVFNRIKPSTTRPSVFQRMSMAASKEENQCSASTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTDDQPQRKIDNLEVKMFNEFSVPFTLSSLLLLLSKFEGSYDVRYCVVPSSSSSKVLTMYAPSSRVLTMYATVLFPLLQVRRFSRASLQFLLSKFEGSHVASLAKFEGSHALRSPSSKGLTRFAVVHSLQVHALRCSSFSPSSKVLTASLQFLSPSSKVLTRFVAVSSLQVAVLSL

Homology

[Close]

BLAST of Spg020735 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 116.7 bits (291), Expect = 4.0e-22
Identity = 70/125 (56.00%), Postives = 90/125 (72.00%), Query Frame = 0


Query: 64  EERMVVMQEHINTLMKAIEEKDSQIEHLKKEVDNSKKGEQRTSVFNRIKPSTTRPSVFQR 123
           EE + V   H  +++K     DS      +EVDNS + +QRTSVF+RIKP TTR SVFQR
Sbjct: 96  EEILEVTTCHTTSIVKVDNNYDSY-----EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQR 155

Query: 124 MSMAASKEENQCSASTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTDDQPQRKIDNLEV 183
           +SMA  +EENQC  ST+ R SAF+RLS+STSKK R STS FDRLK+T+DQ QR++ +L+ 
Sbjct: 156 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 215

Query: 184 KMFNE 189
           K F+E
Sbjct: 216 KPFHE 215

[Close]

BLAST of Spg020735 vs. NCBI nr
Match: KAA0059024.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 8.8e-22
Identity = 69/132 (52.27%), Postives = 85/132 (64.39%), Query Frame = 0


Query: 93  KEVDNSKKGEQRTSVFNRIKPSTTRPSVFQRMSMAASKEENQCSASTFTRPSAFQRLSVS 152
           KEV+NS K  QRTS+F+RIKPSTTR SVFQR+SMA  +EENQC    +TR S F+RLS+S
Sbjct: 231 KEVNNSNKINQRTSIFDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLSIS 290

Query: 153 TSKKSRSSTSVFDRLKVTDDQPQRKIDNLEVKMFNEFSVPFTLSSLLLLLSKFEGSYDVR 212
           TSKK R STS FDRLK+T+DQ QR++ +L+ K F E                 E  YD  
Sbjct: 291 TSKKDRPSTSAFDRLKMTNDQQQREMKSLKAKPFRE-----------------ENDYDKI 345

Query: 213 YCVVPSSSSSKV 225
           +  VPS    K+
Sbjct: 351 HSRVPSRMKRKL 345

[Close]

BLAST of Spg020735 vs. NCBI nr
Match: KAA0052018.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-21
Identity = 69/125 (55.20%), Postives = 89/125 (71.20%), Query Frame = 0


Query: 64  EERMVVMQEHINTLMKAIEEKDSQIEHLKKEVDNSKKGEQRTSVFNRIKPSTTRPSVFQR 123
           EE + V   H  ++++     DS      +E+DNS + +QRTSVF+RIKP TTR SVFQR
Sbjct: 450 EEILEVTACHTTSIVEVDNNYDSY-----EEMDNSNEIKQRTSVFDRIKPLTTRSSVFQR 509

Query: 124 MSMAASKEENQCSASTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTDDQPQRKIDNLEV 183
           +SMA  KEENQC  ST+ R SAF+RLS+STSKK R STS FDRLK+T+DQ QR++  L+ 
Sbjct: 510 LSMATKKEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKTLKA 569

Query: 184 KMFNE 189
           K F+E
Sbjct: 570 KPFHE 569

[Close]

BLAST of Spg020735 vs. NCBI nr
Match: TYK23553.1 (hypothetical protein E5676_scaffold500G00600 [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-21
Identity = 66/126 (52.38%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 70  MQEHINTLMK-------AIEEKDSQIEHLKKEVDNSKKGEQRTSVFNRIKPSTTRPSVFQ 129
           +++H+  +++       +I E D+  ++  +EVDNS K +QRTSVF+RIKP TTR SVF+
Sbjct: 32  LEDHLEEILEVTACHTTSIVEVDNNYDYY-EEVDNSNKIKQRTSVFDRIKPLTTRSSVFE 91

Query: 130 RMSMAASKEENQCSASTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTDDQPQRKIDNLE 189
           R+SM   +EENQC  ST+ R SAF+RLS+STSKK R STS FDRLK+T+DQ QR++ +L+
Sbjct: 92  RLSMTTKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLK 151

[Close]

BLAST of Spg020735 vs. NCBI nr
Match: KAA0056218.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-21
Identity = 69/125 (55.20%), Postives = 90/125 (72.00%), Query Frame = 0


Query: 64  EERMVVMQEHINTLMKAIEEKDSQIEHLKKEVDNSKKGEQRTSVFNRIKPSTTRPSVFQR 123
           EE + V   H  ++++     DS      +E+DNS + +QRTSVF+RIKP TTR SVFQR
Sbjct: 507 EEILEVTACHTTSIVEVDNNYDSY-----EEMDNSNEIKQRTSVFDRIKPLTTRSSVFQR 566

Query: 124 MSMAASKEENQCSASTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTDDQPQRKIDNLEV 183
           +SMA  KEEN+C  ST+TR SAF+RLS+STSKK R ST VFDRLK+T+DQ QR++  L+ 
Sbjct: 567 LSMATKKEENKCPTSTYTRTSAFKRLSISTSKKHRPSTFVFDRLKMTNDQQQREMKTLKA 626

Query: 184 KMFNE 189
           K F+E
Sbjct: 627 KPFHE 626

[Close]

BLAST of Spg020735 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-22
Identity = 70/125 (56.00%), Postives = 90/125 (72.00%), Query Frame = 0


Query: 64  EERMVVMQEHINTLMKAIEEKDSQIEHLKKEVDNSKKGEQRTSVFNRIKPSTTRPSVFQR 123
           EE + V   H  +++K     DS      +EVDNS + +QRTSVF+RIKP TTR SVFQR
Sbjct: 96  EEILEVTTCHTTSIVKVDNNYDSY-----EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQR 155

Query: 124 MSMAASKEENQCSASTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTDDQPQRKIDNLEV 183
           +SMA  +EENQC  ST+ R SAF+RLS+STSKK R STS FDRLK+T+DQ QR++ +L+ 
Sbjct: 156 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 215

Query: 184 KMFNE 189
           K F+E
Sbjct: 216 KPFHE 215

[Close]

BLAST of Spg020735 vs. ExPASy TrEMBL
Match: A0A5A7UV73 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00450 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.3e-22
Identity = 69/132 (52.27%), Postives = 85/132 (64.39%), Query Frame = 0


Query: 93  KEVDNSKKGEQRTSVFNRIKPSTTRPSVFQRMSMAASKEENQCSASTFTRPSAFQRLSVS 152
           KEV+NS K  QRTS+F+RIKPSTTR SVFQR+SMA  +EENQC    +TR S F+RLS+S
Sbjct: 231 KEVNNSNKINQRTSIFDRIKPSTTRSSVFQRLSMATKEEENQCPTFIYTRTSTFKRLSIS 290

Query: 153 TSKKSRSSTSVFDRLKVTDDQPQRKIDNLEVKMFNEFSVPFTLSSLLLLLSKFEGSYDVR 212
           TSKK R STS FDRLK+T+DQ QR++ +L+ K F E                 E  YD  
Sbjct: 291 TSKKDRPSTSAFDRLKMTNDQQQREMKSLKAKPFRE-----------------ENDYDKI 345

Query: 213 YCVVPSSSSSKV 225
           +  VPS    K+
Sbjct: 351 HSRVPSRMKRKL 345

[Close]

BLAST of Spg020735 vs. ExPASy TrEMBL
Match: A0A5A7U9V3 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005100 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.6e-22
Identity = 69/125 (55.20%), Postives = 89/125 (71.20%), Query Frame = 0


Query: 64  EERMVVMQEHINTLMKAIEEKDSQIEHLKKEVDNSKKGEQRTSVFNRIKPSTTRPSVFQR 123
           EE + V   H  ++++     DS      +E+DNS + +QRTSVF+RIKP TTR SVFQR
Sbjct: 450 EEILEVTACHTTSIVEVDNNYDSY-----EEMDNSNEIKQRTSVFDRIKPLTTRSSVFQR 509

Query: 124 MSMAASKEENQCSASTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTDDQPQRKIDNLEV 183
           +SMA  KEENQC  ST+ R SAF+RLS+STSKK R STS FDRLK+T+DQ QR++  L+ 
Sbjct: 510 LSMATKKEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKTLKA 569

Query: 184 KMFNE 189
           K F+E
Sbjct: 570 KPFHE 569

[Close]

BLAST of Spg020735 vs. ExPASy TrEMBL
Match: A0A5D3DIY2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00600 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.3e-22
Identity = 66/126 (52.38%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 70  MQEHINTLMK-------AIEEKDSQIEHLKKEVDNSKKGEQRTSVFNRIKPSTTRPSVFQ 129
           +++H+  +++       +I E D+  ++  +EVDNS K +QRTSVF+RIKP TTR SVF+
Sbjct: 32  LEDHLEEILEVTACHTTSIVEVDNNYDYY-EEVDNSNKIKQRTSVFDRIKPLTTRSSVFE 91

Query: 130 RMSMAASKEENQCSASTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTDDQPQRKIDNLE 189
           R+SM   +EENQC  ST+ R SAF+RLS+STSKK R STS FDRLK+T+DQ QR++ +L+
Sbjct: 92  RLSMTTKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLK 151

[Close]

BLAST of Spg020735 vs. ExPASy TrEMBL
Match: A0A5A7UM99 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold731G00010 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.3e-22
Identity = 69/125 (55.20%), Postives = 90/125 (72.00%), Query Frame = 0


Query: 64  EERMVVMQEHINTLMKAIEEKDSQIEHLKKEVDNSKKGEQRTSVFNRIKPSTTRPSVFQR 123
           EE + V   H  ++++     DS      +E+DNS + +QRTSVF+RIKP TTR SVFQR
Sbjct: 507 EEILEVTACHTTSIVEVDNNYDSY-----EEMDNSNEIKQRTSVFDRIKPLTTRSSVFQR 566

Query: 124 MSMAASKEENQCSASTFTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTDDQPQRKIDNLEV 183
           +SMA  KEEN+C  ST+TR SAF+RLS+STSKK R ST VFDRLK+T+DQ QR++  L+ 
Sbjct: 567 LSMATKKEENKCPTSTYTRTSAFKRLSISTSKKHRPSTFVFDRLKMTNDQQQREMKTLKA 626

Query: 184 KMFNE 189
           K F+E
Sbjct: 627 KPFHE 626

The following BLAST results are available for this feature:

BLAST of Spg020735 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044978.1	4.0e-22	56.00	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0059024.1	8.8e-22	52.27	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0052018.1	1.2e-21	55.20	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
TYK23553.1	1.5e-21	52.38	hypothetical protein E5676_scaffold500G00600 [Cucumis melo var. makuwa]	[more]
KAA0056218.1	1.5e-21	55.20	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Spg020735 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg020735 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQ06	1.9e-22	56.00	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7UV73	4.3e-22	52.27	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7U9V3	5.6e-22	55.20	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3DIY2	7.3e-22	52.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UM99	7.3e-22	55.20	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Spg020735 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 74..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg020735.1	Spg020735.1	mRNA