Spg019943 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCGAAACTTCAACAATCCAAAGTCGGAACCCCAAGATTTGTCGTTGGCGGTGTCTAACTCGACGACCGAAGATGCTACGACGTCGGCCATGGTGCTGTTGGGGTGCACTCGATGCCTCATCTACGTCATGTCGTCTAAGTTAGATCTCAAGTGTCCCAAATGCAACAACACCACGCTGCTTGATTTCTTCAATTTGGAAGAACAAGCATCATCATCTCGGAGAAATCACGTTGCTAAATGA ATGGGTCGAAACTTCAACAATCCAAAGTCGGAACCCCAAGATTTGTCGTTGGCGGTGTCTAACTCGACGACCGAAGATGCTACGACGTCGGCCATGGTGCTGTTGGGGTGCACTCGATGCCTCATCTACGTCATGTCGTCTAAGTTAGATCTCAAGTGTCCCAAATGCAACAACACCACGCTGCTTGATTTCTTCAATTTGGAAGAACAAGCATCATCATCTCGGAGAAATCACGTTGCTAAATGA ATGGGTCGAAACTTCAACAATCCAAAGTCGGAACCCCAAGATTTGTCGTTGGCGGTGTCTAACTCGACGACCGAAGATGCTACGACGTCGGCCATGGTGCTGTTGGGGTGCACTCGATGCCTCATCTACGTCATGTCGTCTAAGTTAGATCTCAAGTGTCCCAAATGCAACAACACCACGCTGCTTGATTTCTTCAATTTGGAAGAACAAGCATCATCATCTCGGAGAAATCACGTTGCTAAATGA MGRNFNNPKSEPQDLSLAVSNSTTEDATTSAMVLLGCTRCLIYVMSSKLDLKCPKCNNTTLLDFFNLEEQASSSRRNHVAK Homology
BLAST of Spg019943 vs. NCBI nr
Match: KAG6583700.1 (hypothetical protein SDJN03_19632, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019351.1 hypothetical protein SDJN02_18311 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 87.8 bits (216), Expect = 4.6e-14 Identity = 43/53 (81.13%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of Spg019943 vs. NCBI nr
Match: XP_039002217.1 (uncharacterized protein LOC120128632 [Hibiscus syriacus] >KAE8702514.1 hypothetical protein F3Y22_tig00110482pilonHSYRG00220 [Hibiscus syriacus]) HSP 1 Score: 65.9 bits (159), Expect = 1.9e-07 Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of Spg019943 vs. NCBI nr
Match: TYH76956.1 (hypothetical protein ES332_D04G121400v1 [Gossypium tomentosum]) HSP 1 Score: 63.5 bits (153), Expect = 9.4e-07 Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of Spg019943 vs. NCBI nr
Match: TKY67036.1 (hypothetical protein E2542_SST09927 [Spatholobus suberectus]) HSP 1 Score: 63.5 bits (153), Expect = 9.4e-07 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0
BLAST of Spg019943 vs. NCBI nr
Match: XP_004506211.1 (uncharacterized protein LOC101502581 [Cicer arietinum]) HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06 Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 0
BLAST of Spg019943 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 8.8e-08 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
BLAST of Spg019943 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 3.3e-07 Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of Spg019943 vs. ExPASy TrEMBL
Match: A0A6A3AD94 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110482pilonHSYRG00220 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 9.1e-08 Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of Spg019943 vs. ExPASy TrEMBL
Match: A0A5D2LD87 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D04G121400v1 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.5e-07 Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of Spg019943 vs. ExPASy TrEMBL
Match: A0A1S2YKZ1 (uncharacterized protein LOC101502581 OS=Cicer arietinum OX=3827 GN=LOC101502581 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.7e-07 Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 0
BLAST of Spg019943 vs. ExPASy TrEMBL
Match: A0A7J9CEH7 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_009299 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06 Identity = 29/53 (54.72%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of Spg019943 vs. ExPASy TrEMBL
Match: A0A0B2QF51 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_030106 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.3e-06 Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 0
BLAST of Spg019943 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 6.3e-09 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
BLAST of Spg019943 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 2.4e-08 Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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