Spg019915 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg019915
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold5: 31099259 .. 31102569 (-)
RNA-Seq Expression	Spg019915
Synteny	Spg019915

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGAGAGTGGCCAATACGCCGACTTAATAAGCCTACCATTTTGGGGACAAGACCGAGTGCGGAGTTGGGAACATAATCGTACAAAATGGAATTCACTCCTTCCCGACTTTAGGGAAGCAGATGAGTGTTCCCTTAAGTGGTGACTCCGAGTCTTGAACAAAGGGTCCTACCCTCTCAATGGCACGAAAGAGTTTTCTGTTTGATGGTTGGACCACAAATAGGTTGTTCATTCGAGGAGAACTGGTACTTAAGGAAATAGAAGTAACCCAGGGGTAAAACAGTAATTTGACCCAGCTGGTGTTACGGACACTCGTGAAGGACTAACTAGTCGATATTGGTCTATATCCGTGGACACAGAAAATATGTTTGCAGTGAGAAGAGTGCAACTGTGAGTCTATAGTGGAATGTACACACAGTTAACGAATATTGATTAATTTGGTTAATGAGTTTGACCAATTAATCTCACATCGTTGGAGCTTCCGATCTGCAGGTCCATTAGGTCCCACTGGTAGCTCATAAAGTAAATTGAGGCAACTAAGTAATAAATGTAAATTGAAAATGTTCAATTTACTAAGGGAAACAATATAATATACATTGATATATTATTATGAGAGAAATTAATATTTGAACACATTAAATTTATGGAAGTTTGAAAGAGTTCAAATAATGAATTAATTAATTTTAAGGCCTAAAATCTATTTGGACAAATTAATTAATTCAAGGCCGAAAATTAAATATGTGATATTTAATTGGTGGTTAATTAATTAAAGAATTCATTAACCGGGAATTAGTCAATTATGGAAATAATTAATCACTTAAGGAAATGATTAATCATTTATGGAAATGATCTAATCACTTATGGAAGTAATTAGTCATTTGTGGAAAAGATTAATCAATTATGGAATTGATTGATCTTGGATTGATTAAATGAGGAATAAGATTGAATCAATTTTGGAAAAGATTGATTTAATTGAATATTTTATTCATGGGCTCTCTTCTATGAATAGAACGCTAGACCTAATTGGTTCAGTAGACTCCTCTTGCTCTTAGACTCACAAGACAAGACCCTAGAATTCTCTCTAGCCTCCCTATTAGAGAAAGACTCCCACAAGTCTTTTGCCTCCTAGACTTAGAGACATACCGGTGTAACCTCTGTGGTTATTGTGTCTTTGAAGAAGAATTTTCCAGCGAAGAAACTACAAGGAGGCTGCTGCGTTTTGGTTCGTTGAAGCGTCGTTGGCGAAGAACGGTGAAGTCTACAACGAAGGTTTGTAACAGTTCTTTCCCGTTTCTTTAGAAAAGCATGAAAATAAATTAGATTTAATTTTCAAGCATGTTTATAGCAATTTCCAGCAACTTTAAAGCATGTTTAAAGTTTATTTTGCCTTTTCGTAACGGTATTTTAATGTTAATTAATATACGGCGTAAGGTCCAATCGATGCGCTTCCACTGCGTAGGGGCTTTTATCCCCTTCAAGGCTTGAAAGGGAAATTCTTCTCCTTGGCTGGAAGGGAAGTTCTTATTAAAGTTGTGGCCCAGGCCATCCCTAATTATGCTATGAGCTGCTTTAAGTTTCCGCTAAACCTTTGTAATGATTTTAATTCTTTTTGTGCTAGGTTTTAGTGGGGTGGCTCAGAGGAAGGACATAAGATTCACTGGCAAAGCTGGAGGAAACTCTGCAATAATAAAGCCCTAAGTGGAATGGGTTTTAAGGATCTCACCATCTTTAACCAAGCTATGCTAGGAAAGCAAAGCTGGAGGCTTCTAAAATACCCTGATAGCCTTTTGGCAAGGGTACTTAGAGGTCGATACTATAAAACAGGGAACTACTTGAATGTAGGGATTGCCAACAATCAATCTTTTGTCTGGAGGAGCTTACTTTGGGGCCGTGAGCTTTTTATGAAGGGCTTTCGTTGGAGAGTTGGGAGTGGTGTTAGCATTGAGGCTTCGTCAGATCCGTGGATTCCAAGAGAGGGGCCATGTAAACCGATTGCCCCCCCATCAGGATACTAGAAATCTAACGGTGGCAAATCTTATCAATGGGAATGGCTCTTGGAATGAGCGGAGGATTAGAGAGCTTTTCATCGGGCAGGATGTTGAGCTCATTATGAATATCCCTCTTAATCCGCGTCAAAAAGAGGATGTCGTTATCTGGCACTATGATCGTAAAGGGATCTTCTCAATTAAAAGCGTATACCGATTGGGGATGTAAATTCAGTGTCAATCAGCGGCTTTTGTTTCAAATCAAGGCCATGTAGTATCCTTTTGGAAAAAGTTTTGGAAAGTTCCTCTACCTTCAAAGATAAAGATTTGTGGTTGGAGAACTTATAAGAATATCCTTCCTACCTTATCTAATCTGTACAATAGAGGAATTGATCTAAATACTTTATGTTTTCTGTGCAGGGAAAGGAGGGAGACGACATCTCACCTGTTTTGGGGTTGCAAAGTTACAAAAGGTCTGTGGCTGAAATATTTTCACCCTACTGATTTAGTCTATTTCATTGGTAGGGAAGATCTGGCGCCTATGGATTATCTACATGGTATTTGGAAGATCTCAAACTCGGGAGTGAGGGAGAAGGACAAGATGTGCAAGAGCCTAATTCTATGTTGGCAGATATGGTCTTACAGAAATCAAATCCATCACAGAAATCAACATCCAGATATCAAATTTCTTCAATCTCAAGTTGACAAATACATGGAAGAATTGTTAGAGAGGGTAGAATCGAACCAGTATTCTGCCCCAGTAGCTTCGGCTTCTTCGCAATAGACAGTTTGGGTCAGACCTCCAAGTGGGATGTGGAAGCTCAATAGTGACGCGGCCTGGTCTGAAGAGTTTAATCGCGGTGGGATTGGGTGGGCTCTTCTGCAATCGGATGGGTCTCTTCTGTCTGCCGGATTTCGAGCGATATCAAGGCGATGGAAGATTTTGCGTCTAGAGTCATTGGCGGTTTGCGAAGGTCTCAAAGCCTTGTCGATCGAGTCACCTCCTGTCCAAATCGAAACAGATGCTCTTCAGGTGGTCCATCTTCTAAACGGACGTGAGGAAGACGAGACAGAAGTGAAGCTCTTCATAGATGAAACTAAATCCCTAATTTTCGAGAGGAAGGTTGAAGGTGTGTACCTTGTGAACAAAAATCTTAACCAACTGGCTCATAATTTGGCCAGAAAAGCGAGTTTAAGTGGGTGTTCAAATAACTGGACCCACTCCTTTCCTGATTGGCTACTTAATCTAAATGTAGGAGATTTAGGTGGTTTTGATACCAATAGTGGGGGTTCTGTCCCACCACCAATGGTTTCCATCCTTTAA

mRNA sequence

ATGAATATCCCTCTTAATCCGCGTCAAAAAGAGGATGTCGTTATCTGGCACTATGATCGTAAAGGGATCTTCTCAATTAAAAGCGTATACCGATTGGGGATGGAAAGGAGGGAGACGACATCTCACCTGTTTTGGGGTTGCAAAGTTACAAAAGGTCTGTGGCTGAAATATTTTCACCCTACTGATTTAGTCTATTTCATTGGTAGGGAAGATCTGGCGCCTATGGATTATCTACATGGTATTTGGAAGATCTCAAACTCGGGAGTGAGGGAGAAGGACAAGATGTGCAAGAGCCTAATTCTATTTTGGGTCAGACCTCCAAGTGGGATGTGGAAGCTCAATAGTGACGCGGCCTGGTCTGAAGAGTTTAATCGCGGTGGGATTGGGTGGGCTCTTCTGCAATCGGATGGGTCTCTTCTGTCTGCCGGATTTCGAGCGATATCAAGGCGATGGAAGATTTTGCGTCTAGAGTCATTGGCGGTTTGCGAAGGTCTCAAAGCCTTGTCGATCGAGTCACCTCCTGTCCAAATCGAAACAGATGCTCTTCAGGTGGTCCATCTTCTAAACGGACGTGAGGAAGACGAGACAGAAGTGAAGCTCTTCATAGATGAAACTAAATCCCTAATTTTCGAGAGGAAGGTTGAAGGTGTGTACCTTGTGAACAAAAATCTTAACCAACTGGCTCATAATTTGGCCAGAAAAGCGAGTTTAAGTGGGTGTTCAAATAACTGGACCCACTCCTTTCCTGATTGGCTACTTAATCTAAATGTAGGAGATTTAGGTGGTTTTGATACCAATAGTGGGGGTTCTGTCCCACCACCAATGGTTTCCATCCTTTAA

Coding sequence (CDS)

ATGAATATCCCTCTTAATCCGCGTCAAAAAGAGGATGTCGTTATCTGGCACTATGATCGTAAAGGGATCTTCTCAATTAAAAGCGTATACCGATTGGGGATGGAAAGGAGGGAGACGACATCTCACCTGTTTTGGGGTTGCAAAGTTACAAAAGGTCTGTGGCTGAAATATTTTCACCCTACTGATTTAGTCTATTTCATTGGTAGGGAAGATCTGGCGCCTATGGATTATCTACATGGTATTTGGAAGATCTCAAACTCGGGAGTGAGGGAGAAGGACAAGATGTGCAAGAGCCTAATTCTATTTTGGGTCAGACCTCCAAGTGGGATGTGGAAGCTCAATAGTGACGCGGCCTGGTCTGAAGAGTTTAATCGCGGTGGGATTGGGTGGGCTCTTCTGCAATCGGATGGGTCTCTTCTGTCTGCCGGATTTCGAGCGATATCAAGGCGATGGAAGATTTTGCGTCTAGAGTCATTGGCGGTTTGCGAAGGTCTCAAAGCCTTGTCGATCGAGTCACCTCCTGTCCAAATCGAAACAGATGCTCTTCAGGTGGTCCATCTTCTAAACGGACGTGAGGAAGACGAGACAGAAGTGAAGCTCTTCATAGATGAAACTAAATCCCTAATTTTCGAGAGGAAGGTTGAAGGTGTGTACCTTGTGAACAAAAATCTTAACCAACTGGCTCATAATTTGGCCAGAAAAGCGAGTTTAAGTGGGTGTTCAAATAACTGGACCCACTCCTTTCCTGATTGGCTACTTAATCTAAATGTAGGAGATTTAGGTGGTTTTGATACCAATAGTGGGGGTTCTGTCCCACCACCAATGGTTTCCATCCTTTAA

Protein sequence

MNIPLNPRQKEDVVIWHYDRKGIFSIKSVYRLGMERRETTSHLFWGCKVTKGLWLKYFHPTDLVYFIGREDLAPMDYLHGIWKISNSGVREKDKMCKSLILFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLKALSIESPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNWTHSFPDWLLNLNVGDLGGFDTNSGGSVPPPMVSIL

Homology

[Close]

BLAST of Spg019915 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-18
Identity = 51/142 (35.92%), Postives = 84/142 (59.15%), Query Frame = 0


Query: 103 WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVC 162
           W  P S  WKLN+DAAW  + N GGIGW L    G ++ A  R I     I  LE +A+C
Sbjct: 79  WKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNITYLEVMAIC 138

Query: 163 EGLKALSIE---------SPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERK 222
           EGL+A+  E           P+ +E+D+L+ +HLL+ + +D+TE+   ++E   ++ + K
Sbjct: 139 EGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMEDMK 198

Query: 223 VEGVYLVNKNLNQLAHNLARKA 236
           +  +  +++  N++AH+LAR+A
Sbjct: 199 IVSMRHISREANKVAHDLARRA 220

[Close]

BLAST of Spg019915 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-18
Identity = 49/134 (36.57%), Postives = 83/134 (61.94%), Query Frame = 0


Query: 103 WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVC 162
           W  P S  WKLN++AAW  + N GGIGW L    G ++ A  R I     I  LE +A+C
Sbjct: 79  WKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAIC 138

Query: 163 EGLKALSIE-SPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVN 222
           EGL+A+  E   P+ +E+D+L+ +HLL+ + +D+TE+   ++E   ++ + ++  +  ++
Sbjct: 139 EGLRAIRQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMRHIS 198

Query: 223 KNLNQLAHNLARKA 236
           +  N++AH LAR+A
Sbjct: 199 REANKVAHGLARRA 212

[Close]

BLAST of Spg019915 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 102.4 bits (254), Expect = 6.3e-18
Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 101 LFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLA 160
           L W  PP  +W LN+DA+WS+  +RGGIGW +   DG ++ AG R +     +  LE+ A
Sbjct: 69  LKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASA 128

Query: 161 VCEGLKALSIES--PPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVY 220
           + EGL+ L+      P+ IETD+ +V  LLN + ED T+    ++E  +L    ++    
Sbjct: 129 ILEGLRNLTNLGVLRPLHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILAFA 188

Query: 221 LVNKNLNQLAHNLARKASLSGCSNNWTHSFPDWL 253
            V +  N  AH+LA++AS+   S  W   FP+WL
Sbjct: 189 KVGRETNGCAHSLAQRASVLRESMIWVDCFPNWL 222

[Close]

BLAST of Spg019915 vs. NCBI nr
Match: XP_019156914.1 (PREDICTED: uncharacterized protein LOC109153501 [Ipomoea nil])

HSP 1 Score: 99.0 bits (245), Expect = 6.9e-17
Identity = 81/297 (27.27%), Postives = 127/297 (42.76%), Query Frame = 0


Query: 1   MNIPLNPRQKEDVVIWHYDRKGIFSIKSVYR-----------------LGMERRETTSHL 60
           +NIP++ R+  D  +W +D+KG +S+KS Y+                 L +  +E+  HL
Sbjct: 130 LNIPVSVRRPRDEWMWRWDQKGAYSVKSCYKQLTLVDADDRPWTKIWNLHIPPKESALHL 189

Query: 61  FWGC--------------KVTKGLWLKYFHPTDLVYFIGREDLAPMDYLHGI----WKIS 120
           F  C              K     W  +    D V+     D+  M +   +    W+ +
Sbjct: 190 FVYCAEVTHPALDVDSLPKFLMACWGVWNSRNDSVWKGVVFDMNVMLHRSMVFLDSWRNA 249

Query: 121 NSGVREKDKMCKSLILFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFR 180
           N G R   +        W +P  G  KLN+D A  +E N  G+GW L   +G  L+A   
Sbjct: 250 NEGTRTNQEQMDRAT--WTKPAQGRLKLNTDVALRQESNEMGVGWVLRDDNGIFLAAKNV 309

Query: 181 AISRRWKILRLESLAVCEGLKALSIES-PPVQIETDALQVVHLLNGREEDETEVKLFIDE 240
            +   + +   ESL++ E L  L       V +ETD   V + L   E   +     I++
Sbjct: 310 RLPGVYMVKEAESLSIREALSWLKATGMGDVDVETDCQTVFNALRS-EPFNSSFGFLIED 369

Query: 241 TKSLIFERKVEGVYLVNKNLNQLAHNLARKA-SLSGCSNNWTHSFPDWLLNLNVGDL 261
            K L  E      Y V ++ N  AH +AR+A S+SGC   W  S P +L++  + DL
Sbjct: 370 IKGLASEIVDVDFYCVKRSANSAAHIVAREAFSVSGC-GEWFDSPPSFLVDSLIHDL 422

[Close]

BLAST of Spg019915 vs. NCBI nr
Match: EEC73134.1 (hypothetical protein OsI_07152 [Oryza sativa Indica Group])

HSP 1 Score: 92.4 bits (228), Expect = 6.5e-15
Identity = 73/263 (27.76%), Postives = 114/263 (43.35%), Query Frame = 0


Query: 1   MNIPLNPRQKEDVVIWHYDRKGIFSIKSVYRLGME--RRETTS-----------HLFWGC 60
           + I ++ RQ+ED V W  DR G FS++S Y+L M+  R +  S           +L W C
Sbjct: 366 LKIKISSRQEEDFVAWFPDRLGRFSVRSAYQLAMQIARLDECSCSSDYAIKKGWNLIWSC 425

Query: 61  KVTKGLWLKYFHPTDLVYFIGREDLAPMDYLHGIWKISNSGVREKDKMCKSLILF----- 120
            V          P  +  F  R     +  +    K +   V    +      LF     
Sbjct: 426 NV----------PQKVKIFGWRAATNSLPTMENKKKRNFGIVGRNVRQVWLATLFMAYKL 485

Query: 121 WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVC 180
           W RP  G  KLN D ++  +  RGGIG  L +S G ++ +    I R    L  E +A  
Sbjct: 486 WSRPKPGWMKLNIDGSYGPQDGRGGIGAVLRESFGRVIFSACGFIGRCNGALESELIACR 545

Query: 181 EGLK-ALSIESPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVN 240
           +GL  AL     P+ +E+D L+++ LLN +E+  +     + E + L+   K      V+
Sbjct: 546 DGLNLALQWTLLPIAVESDCLEIIQLLNSKEKLLSAEGFIVREIRFLMTGTKEVSFAKVH 605

Query: 241 KNLNQLAHNLARKASLSGCSNNW 245
           +N N+++H LA K         W
Sbjct: 606 RNQNRVSHFLANKGRCESMMEFW 618

[Close]

BLAST of Spg019915 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.1e-19
Identity = 51/142 (35.92%), Postives = 84/142 (59.15%), Query Frame = 0


Query: 103 WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVC 162
           W  P S  WKLN+DAAW  + N GGIGW L    G ++ A  R I     I  LE +A+C
Sbjct: 79  WKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNITYLEVMAIC 138

Query: 163 EGLKALSIE---------SPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERK 222
           EGL+A+  E           P+ +E+D+L+ +HLL+ + +D+TE+   ++E   ++ + K
Sbjct: 139 EGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMEDMK 198

Query: 223 VEGVYLVNKNLNQLAHNLARKA 236
           +  +  +++  N++AH+LAR+A
Sbjct: 199 IVSMRHISREANKVAHDLARRA 220

[Close]

BLAST of Spg019915 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.0e-19
Identity = 49/134 (36.57%), Postives = 83/134 (61.94%), Query Frame = 0


Query: 103 WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVC 162
           W  P S  WKLN++AAW  + N GGIGW L    G ++ A  R I     I  LE +A+C
Sbjct: 79  WKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAIC 138

Query: 163 EGLKALSIE-SPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVN 222
           EGL+A+  E   P+ +E+D+L+ +HLL+ + +D+TE+   ++E   ++ + ++  +  ++
Sbjct: 139 EGLRAIRQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMRHIS 198

Query: 223 KNLNQLAHNLARKA 236
           +  N++AH LAR+A
Sbjct: 199 REANKVAHGLARRA 212

[Close]

BLAST of Spg019915 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.0e-18
Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 101 LFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLA 160
           L W  PP  +W LN+DA+WS+  +RGGIGW +   DG ++ AG R +     +  LE+ A
Sbjct: 69  LKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASA 128

Query: 161 VCEGLKALSIES--PPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVY 220
           + EGL+ L+      P+ IETD+ +V  LLN + ED T+    ++E  +L    ++    
Sbjct: 129 ILEGLRNLTNLGVLRPLHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILAFA 188

Query: 221 LVNKNLNQLAHNLARKASLSGCSNNWTHSFPDWL 253
            V +  N  AH+LA++AS+   S  W   FP+WL
Sbjct: 189 KVGRETNGCAHSLAQRASVLRESMIWVDCFPNWL 222

[Close]

BLAST of Spg019915 vs. ExPASy TrEMBL
Match: M5WQH4 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa018217mg PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 5.7e-17
Identity = 73/281 (25.98%), Postives = 122/281 (43.42%), Query Frame = 0


Query: 3   IPLNPRQKEDVVIWHYDRKGIFSIKSVYRLG---MERRETTS------------------ 62
           IPL+   K+D +IWH+D+KG F++KS Y++    ++ R   S                  
Sbjct: 17  IPLSFHHKDDALIWHFDKKGQFTVKSAYKVARTVLDPRTMASSSTGNGFIKGWTALWKAK 76

Query: 63  -----HLFW-----GCKVTK-GLWLKYFHPTDLVYFIGREDLAPMDYLHGIWKISNSGVR 122
                 LFW     G   TK  LW +  H        G E       LH +W    +   
Sbjct: 77  IPGKIKLFWWRACTGILTTKDNLWKRKIHLDTCCELCGAE---MESTLHVLWYCPFARGG 136

Query: 123 EKDKMCKSLILFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRR 182
           +      S    W +P +G  K+N D +W+     GG+G  +  S+G  ++     +   
Sbjct: 137 DAFGRGCSAPHTWTKPCAGGLKINLDGSWTAGNTYGGVGIVVRDSNGRFVAGRALRVDNV 196

Query: 183 WKILRLESLAVCEG-LKALSIESPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLI 242
           +  L++E+ A  EG + A+  +   V  E+D+LQ++  +     D + V   +++TK+L+
Sbjct: 197 FSALQVEASAAREGAILAVERDFNNVIFESDSLQILSAIRSSSVDRSNVGQVVEDTKALL 256

Query: 243 FERKVEGVYLVNKNLNQLAHNLARKASLSGCSNNWTHSFPD 251
            +   +G   + +  N  AH LAR AS  G +  W    PD
Sbjct: 257 TQITGDGFTHIRRVANGAAHRLARYASHLGTTTTWFEEPPD 294

[Close]

BLAST of Spg019915 vs. ExPASy TrEMBL
Match: B8AHI8 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07152 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.1e-15
Identity = 73/263 (27.76%), Postives = 114/263 (43.35%), Query Frame = 0


Query: 1   MNIPLNPRQKEDVVIWHYDRKGIFSIKSVYRLGME--RRETTS-----------HLFWGC 60
           + I ++ RQ+ED V W  DR G FS++S Y+L M+  R +  S           +L W C
Sbjct: 366 LKIKISSRQEEDFVAWFPDRLGRFSVRSAYQLAMQIARLDECSCSSDYAIKKGWNLIWSC 425

Query: 61  KVTKGLWLKYFHPTDLVYFIGREDLAPMDYLHGIWKISNSGVREKDKMCKSLILF----- 120
            V          P  +  F  R     +  +    K +   V    +      LF     
Sbjct: 426 NV----------PQKVKIFGWRAATNSLPTMENKKKRNFGIVGRNVRQVWLATLFMAYKL 485

Query: 121 WVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVC 180
           W RP  G  KLN D ++  +  RGGIG  L +S G ++ +    I R    L  E +A  
Sbjct: 486 WSRPKPGWMKLNIDGSYGPQDGRGGIGAVLRESFGRVIFSACGFIGRCNGALESELIACR 545

Query: 181 EGLK-ALSIESPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVN 240
           +GL  AL     P+ +E+D L+++ LLN +E+  +     + E + L+   K      V+
Sbjct: 546 DGLNLALQWTLLPIAVESDCLEIIQLLNSKEKLLSAEGFIVREIRFLMTGTKEVSFAKVH 605

Query: 241 KNLNQLAHNLARKASLSGCSNNW 245
           +N N+++H LA K         W
Sbjct: 606 RNQNRVSHFLANKGRCESMMEFW 618

[Close]

BLAST of Spg019915 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 8.2e-08
Identity = 44/158 (27.85%), Postives = 73/158 (46.20%), Query Frame = 0


Query: 97  KSLILFWVRPPSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRL 156
           ++L + W  PP    K N+DA W  E  R GIGW L    G +L  G RA+ R   +L  
Sbjct: 131 RNLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEA 190

Query: 157 ESLAVCEGLKALS-IESPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVE 216
           E  A+   +  +S      +  E+DA  +V+LLN  +   T ++  +++ + L+   +  
Sbjct: 191 ELEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDDFWPT-LQPALEDIQQLLHHFEEV 250

Query: 217 GVYLVNKNLNQLAHNLARKA-SLSGCSNNWTHSFPDWL 253
                 +  N++A  +AR++ S S          P WL
Sbjct: 251 KFEFTPRGGNKVADRIARESISFSNYDPKLFSIVPQWL 287

[Close]

BLAST of Spg019915 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-06
Identity = 38/133 (28.57%), Postives = 65/133 (48.87%), Query Frame = 0


Query: 105 RPPSGMW-KLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCE 164
           RPP   W K N+DA W+ +  R GIGW L    G +   G RA+ +   +L  E  A+  
Sbjct: 421 RPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRW 480

Query: 165 GLKALS-IESPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVNK 224
            + +LS  +   V  E+D+  ++ +LN  +E    +K  I + + L+ +        + +
Sbjct: 481 AVLSLSRFQYNYVIFESDSQVLIEILN-NDEIWPSLKPTIQDLQRLLSQFTEVKFVFIPR 540

Query: 225 NLNQLAHNLARKA 236
             N LA  +AR++
Sbjct: 541 EGNTLAERVARES 552

[Close]

BLAST of Spg019915 vs. TAIR 10
Match: AT1G52990.1 (thioredoxin family protein )

HSP 1 Score: 42.4 bits (98), Expect = 7.2e-04
Identity = 42/156 (26.92%), Postives = 63/156 (40.38%), Query Frame = 0


Query: 107 PSGMWKLNSDAAWSEEFNRGGIGWALLQSDGSLLSAGFRAISRRWKILRLESLAVCEGLK 166
           PS   K N DA+  E     G+GW +  S G++L  G      R      E  A+   ++
Sbjct: 44  PSCRVKCNYDASHHEGDVVSGLGWLIRNSQGTVLECGMGKFQGRMTPEEAECSALIWAIQ 103

Query: 167 ALS-IESPPVQIETDALQVVHLLNGREEDETEVKLFIDETKSLIFERKVEGVYLVNKNLN 226
           A S      V  E D   V  L+N  + D   +K ++D  KS I           ++  N
Sbjct: 104 ATSAFGYTKVIFEGDNSNVNRLIN-TKSDNPRLKHYLDTIKSWIPSFTSTEFIFTHREQN 163

Query: 227 QLAHNLARKASLSGCSNNWTHSFPDWLLNLNVGDLG 262
           Q A  L +KA  S    +  +  P +L  + +  LG
Sbjct: 164 QCADTLVKKAIKSSTQWSLFNCCPHFLYPIVLSILG 198

The following BLAST results are available for this feature:

BLAST of Spg019915 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156777.1	1.3e-18	35.92	uncharacterized protein LOC111023608 [Momordica charantia]	[more]
XP_022143535.1	1.6e-18	36.57	uncharacterized protein LOC111013412 [Momordica charantia]	[more]
XP_022155262.1	6.3e-18	37.01	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
XP_019156914.1	6.9e-17	27.27	PREDICTED: uncharacterized protein LOC109153501 [Ipomoea nil]	[more]
EEC73134.1	6.5e-15	27.76	hypothetical protein OsI_07152 [Oryza sativa Indica Group]	[more]

BLAST of Spg019915 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg019915 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSV1	6.1e-19	35.92	uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1CP26	8.0e-19	36.57	uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DNV9	3.0e-18	37.01	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
M5WQH4	5.7e-17	25.98	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa018217m...	[more]
B8AHI8	3.1e-15	27.76	Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07152 PE=4...	[more]

BLAST of Spg019915 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34320.1	8.2e-08	27.85	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT4G29090.1	1.5e-06	28.57	Ribonuclease H-like superfamily protein	[more]
AT1G52990.1	7.2e-04	26.92	thioredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 114..235 e-value: 4.0E-15 score: 55.7
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 109..236 e-value: 7.4E-9 score: 37.7
None	No IPR available	PANTHER	PTHR33033	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 102..248
None	No IPR available	PANTHER	PTHR33033:SF67	SUBFAMILY NOT NAMED	coord: 102..248
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 113..233 e-value: 2.4263E-15 score: 68.88
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 109..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg019915.1	Spg019915.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity