Spg019760 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGCCTGTGGCTGTGGTGGTGGTGGTTGCGATTGTTGTGGTTGATCTTGATTTTGCGAGAGCCTCCGCACCACCGACGAGGCTCCCCGTGGAGGAGCGGGCTTCGACACACAGCTTCCTATCTTGGCTAATTATGAGTGTGAAAAACTACAGTAGATGGAAATCCAAATCCAAGGGTTTTGTGCTGCTCGCTGTCGTCCTTCTATGGACCAGATTTTTGGGCTTTACACAGACGACGGTGAAAAGATCAGAGGTGCACAATTTCACCACTTTCTTCAATCTTCCCCCTCTTTTTCTTTTTTTTTTTTCCTTTTTATTATTATTTTTTTCATGTTCCTATAAGAATTAGGAAAATGTCGCAATTTGAATTTCAGAATAATTTGGGTATGAATTTATGAATTTTTTTTTTATAAAATTAAATAGATGGAGGTCAGCTAAACTATCTGGTTTTAAAATAAACAAATATTGTCCCACACTAACTCATCTCTTTTTTGCAGACGACAATCTTGTTTTTCTTAAAGCTAAGGAGTCGGTCTTATGTACTTTCAAGCAAATCCTGAAACAATACGAGGGAGCCTCAGGCCAAACAATCAACCTTGACAAGTCCATCTTCATGGCGAGCAAAAATGTTAAGGAGGAGACTCTGGCTAAGTGTGAGGCAGCTCTCGGGATCAAGAGATCGAGTTCGTTAGGCCAGTATTTGGGGATGCCATCTCAAACAGGAAGGAATAAAGGAGCGGTTTTCAAAAGAATCAAAGACAGGGTTGAGAAAATTCTTCAAGGATGGAAGGGAAATCTTTTCTCCATGGGAGGAAAAGAAGTTCTCATAAAGGTTGTTGCTCAAGCGATTCCGGTCTACACCATGAGTTGTTTTCGATTACCCTCTAATATTTGTTCCTTTATTGACAGGTTATGCGCTAAATTTTGGTGGGGATCCAACGGAAACAAAGACAAAGCCCATTGGATGAGTTGGAAGAAAATGTGCCTAAACAAGAGCCAAAGAGGAATGGGATTTCACTATCTAGTTGCGTTCAACCAAGCTATGCTTGCTAAACAAAGCTGGAGGCTGATAAGGAACCCTAACAGCCTCTTGTTCAAGATTCTAAGAGGGCGATACTTCAAAGGGAGGAATTTCCTTGAAGCATCTTTAGGCAACTCTCCCTCCATCACCTGGAGAAGCATCATTTGGGGTCGTGACCTGTTCCTAAAGGGGTACCGCTGGAGAATAGGAAATGGAGCCCAAATCTTCATTGACAAGGATCCTTGGATTTCCCGAGAGGGCAATCCTAGAGCCTTCTCCATCCCAAACTCTCCATCGGGCCTAAGAGTAAAAGACTTCCTAGATGAAAACAACAAATGGAAAGAAGGCTACATCAAGGAAGTTTTCTCTCCCCAAGATGCGACCGATATCCTCAATATGCCAACTGGGAGTAAGGATTTGAAAGATGAAATAGTTTGGAACCTTGACAAAAAAGGAATTTTCTCTGTGAAAAGTGCCTATCGTCTAGCCACGAAGGAGTTATCCACTAATGAAGCTTCCCTATCCAACCCCTCAAAGGAAGCAACTTTCTGGGATAAGTTATGGAAGGCCAATGTTCTCCCAAGATCCAAAGTGTGTGTGTGGAGAATTGTAAACGACATCATCCCCACAAAGACTAATATTCTCAAAAAGGGAGTTGACCTTCTTCCCTGATGCTCTTTTTGTGGAAAAAATAAGGAAATGACCCCCATCTTATATGGGAGTGCAAATTTGTTAGATCATTATGGTCCTGTTTTGTTCCTAGCTCTCTAATTCTGTGGTCTTTGTGTAGGGATAATTGGCAACCAAAGGATTACTGGGGATGGATGGCTTCTAATCTTGGCAAAGAAGACATTGACAGAAGTATTATTATCATGTGGCAAATCTGGGAATTCAGAAACAGAGCAGATCACTACAATATCCCAGCATCATCAAAATTATTCCAAAACTCCATTGACACAAGGCTAAAAGAATGGGAATCCTCTTACCTCAAGACCCATTCTCCTAAAAGGCCAAGGAATCCCGCGAGTCAAGCTTAATGGGAGAAGGATGGAAACTCAATTCAGACGCAGCCTGGTTCGAGAAAGAAGGATGCGGTGGTCTCGGATGGCTCGTGCATGACTCGGAGGGTTCCCTGATCTGTTTCGGAATGAAGCAAGTTAATCAAAAATGGGCTATCAAGAATTTGGAAGCTTGCGCTATGCTAGAAGGTATCAAGGAAGTTTCAGATACCTGTAATCGCCTCGGTATTCGCCTGGAAGTCGAGACAGATGCTATTGAGGTCGTTAAGGCCATCAACCGCGAGTCGGAAGATTTGTCCGACCTGAAGATCTTCACTGATGAAATCAAGGCTCTTGCTACCCGAGCCTTCTCCATGAACTTTAGCTATTGTAATCGTTTTTTGAATACAGCCGCGCACTGTGTTGCGAGAAGCGCTGCCGGCAGGTCCTTGTCTTCTCCGGCGAAGTCTCCTGGCCAGTCGTCTTCTTCGCGGGAAAGGGAGGATTGTTTTTGGGCTCCCAATATTCCGATTTGGGCTTTCCCTCTCATTAATGGGGGTGGTTGTACTGGTCATTACTGTTTTTAA ATGCCGCCTGTGGCTGTGGTGGTGGTGGTTGCGATTGTTGTGGTTGATCTTGATTTTGCGAGAGCCTCCGCACCACCGACGAGGCTCCCCGTGGAGGAGCGGGCTTCGACACACAGCTTCCTATCTTGGCTAATTATGAGTGTGAAAAACTACAGTAGATGGAAATCCAAATCCAAGGGTTTTGTGCTGCTCGCTGTCGTCCTTCTATGGACCAGATTTTTGGGCTTTACACAGACGACGGTGAAAAGATCAGAGGCCAAGGAATCCCGCGAGTCAAGCTTAATGGGAGAAGGATGGAAACTCAATTCAGACGCAGCCTGGTTCGAGAAAGAAGGATGCGGTGGTCTCGGATGGCTCGTGCATGACTCGGAGGGTTCCCTGATCTGTTTCGGAATGAAGCAAGTTAATCAAAAATGGGCTATCAAGAATTTGGAAGCTTGCGCTATGCTAGAAGGTATCAAGGAAGTTTCAGATACCTGTAATCGCCTCGGTATTCGCCTGGAAGTCGAGACAGATGCTATTGAGGTCGTTAAGGCCATCAACCGCGAGTCGGAAGATTTGTCCGACCTGAAGATCTTCACTGATGAAATCAAGGCTCTTGCTACCCGAGCCTTCTCCATGAACTTTAGCTATTGTAATCGTTTTTTGAATACAGCCGCGCACTGTGTTGCGAGAAGCGCTGCCGGCAGGTCCTTGTCTTCTCCGGCGAAGTCTCCTGGCCAGTCGTCTTCTTCGCGGGAAAGGGAGGATTGTTTTTGGGCTCCCAATATTCCGATTTGGGCTTTCCCTCTCATTAATGGGGGTGGTTGTACTGGTCATTACTGTTTTTAA ATGCCGCCTGTGGCTGTGGTGGTGGTGGTTGCGATTGTTGTGGTTGATCTTGATTTTGCGAGAGCCTCCGCACCACCGACGAGGCTCCCCGTGGAGGAGCGGGCTTCGACACACAGCTTCCTATCTTGGCTAATTATGAGTGTGAAAAACTACAGTAGATGGAAATCCAAATCCAAGGGTTTTGTGCTGCTCGCTGTCGTCCTTCTATGGACCAGATTTTTGGGCTTTACACAGACGACGGTGAAAAGATCAGAGGCCAAGGAATCCCGCGAGTCAAGCTTAATGGGAGAAGGATGGAAACTCAATTCAGACGCAGCCTGGTTCGAGAAAGAAGGATGCGGTGGTCTCGGATGGCTCGTGCATGACTCGGAGGGTTCCCTGATCTGTTTCGGAATGAAGCAAGTTAATCAAAAATGGGCTATCAAGAATTTGGAAGCTTGCGCTATGCTAGAAGGTATCAAGGAAGTTTCAGATACCTGTAATCGCCTCGGTATTCGCCTGGAAGTCGAGACAGATGCTATTGAGGTCGTTAAGGCCATCAACCGCGAGTCGGAAGATTTGTCCGACCTGAAGATCTTCACTGATGAAATCAAGGCTCTTGCTACCCGAGCCTTCTCCATGAACTTTAGCTATTGTAATCGTTTTTTGAATACAGCCGCGCACTGTGTTGCGAGAAGCGCTGCCGGCAGGTCCTTGTCTTCTCCGGCGAAGTCTCCTGGCCAGTCGTCTTCTTCGCGGGAAAGGGAGGATTGTTTTTGGGCTCCCAATATTCCGATTTGGGCTTTCCCTCTCATTAATGGGGGTGGTTGTACTGGTCATTACTGTTTTTAA MPPVAVVVVVAIVVVDLDFARASAPPTRLPVEERASTHSFLSWLIMSVKNYSRWKSKSKGFVLLAVVLLWTRFLGFTQTTVKRSEAKESRESSLMGEGWKLNSDAAWFEKEGCGGLGWLVHDSEGSLICFGMKQVNQKWAIKNLEACAMLEGIKEVSDTCNRLGIRLEVETDAIEVVKAINRESEDLSDLKIFTDEIKALATRAFSMNFSYCNRFLNTAAHCVARSAAGRSLSSPAKSPGQSSSSREREDCFWAPNIPIWAFPLINGGGCTGHYCF Homology
BLAST of Spg019760 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia]) HSP 1 Score: 77.0 bits (188), Expect = 2.8e-10 Identity = 57/196 (29.08%), Postives = 99/196 (50.51%), Query Frame = 0
BLAST of Spg019760 vs. NCBI nr
Match: KAG6599977.1 (hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 71.6 bits (174), Expect = 1.2e-08 Identity = 44/115 (38.26%), Postives = 62/115 (53.91%), Query Frame = 0
BLAST of Spg019760 vs. NCBI nr
Match: XP_021763631.1 (uncharacterized protein LOC110728264 [Chenopodium quinoa]) HSP 1 Score: 70.1 bits (170), Expect = 3.4e-08 Identity = 51/188 (27.13%), Postives = 88/188 (46.81%), Query Frame = 0
BLAST of Spg019760 vs. NCBI nr
Match: XP_021847414.1 (uncharacterized protein LOC110787151 [Spinacia oleracea]) HSP 1 Score: 65.9 bits (159), Expect = 6.4e-07 Identity = 42/130 (32.31%), Postives = 73/130 (56.15%), Query Frame = 0
BLAST of Spg019760 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia]) HSP 1 Score: 64.7 bits (156), Expect = 1.4e-06 Identity = 37/139 (26.62%), Postives = 72/139 (51.80%), Query Frame = 0
BLAST of Spg019760 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.4e-10 Identity = 57/196 (29.08%), Postives = 99/196 (50.51%), Query Frame = 0
BLAST of Spg019760 vs. ExPASy TrEMBL
Match: A0A5B7BU49 (RNase H domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_041820 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.1e-07 Identity = 45/127 (35.43%), Postives = 65/127 (51.18%), Query Frame = 0
BLAST of Spg019760 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 6.9e-07 Identity = 36/134 (26.87%), Postives = 70/134 (52.24%), Query Frame = 0
BLAST of Spg019760 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 6.9e-07 Identity = 37/139 (26.62%), Postives = 72/139 (51.80%), Query Frame = 0
BLAST of Spg019760 vs. ExPASy TrEMBL
Match: A0A6J1D4B6 (uncharacterized protein LOC111017181 OS=Momordica charantia OX=3673 GN=LOC111017181 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.1e-07 Identity = 42/130 (32.31%), Postives = 61/130 (46.92%), Query Frame = 0
BLAST of Spg019760 vs. TAIR 10
Match: AT1G52990.1 (thioredoxin family protein ) HSP 1 Score: 44.3 bits (103), Expect = 1.9e-04 Identity = 37/129 (28.68%), Postives = 61/129 (47.29%), Query Frame = 0
BLAST of Spg019760 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 43.1 bits (100), Expect = 4.2e-04 Identity = 33/128 (25.78%), Postives = 63/128 (49.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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