Spg019556 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg019556
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Locationscaffold5: 34134873 .. 34138383 (-)
RNA-Seq ExpressionSpg019556
SyntenySpg019556
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGGTCAAAGTCGAGAGCACGATGCATCGACAGTGTATGGAGAGGATGTGGATCCCGTGGTGGTTGGTTCCTCGACTGAGCCTTCATCTGCTCGAGCTTCAGGTAATAATCATATCATACAAACTTAAGTTTTTAAAGGTTATTTCGTTATAACAACTTTTTCTTTGTTTCAGGATCTAACGCATTACAAGGAAGACGAAAGAGAGGGCATAGTCGAAATATCAAAATTGATCGGTATGTGGCTACACACAATAGGATACCCATTCACATTGATGAGTCCGTCGGCAAACCAACGTGTAAGTTTGCTACACAATTCAGTGGGACGATTGGTACCCTCACACGAGATACAATTCCGTTGCATTACAAGGCTTGGCCTGAGGTCCCCCAACAAGTTCGAGACAACGTAAAAGATCGACTCTTGGTACGTTCACATTTTTTGGTTATACTATTTGAATCATACATACTTGTTCACTCTTTTTGTTATTAACCATGCATACGAAATGGGATGTGGATTTGTCGAAGCCGCATATTAACAAGTATGTGGAACGTAAAATAATGGACACTTTTAGGGAGTTTAGGAGCGAGTTGCATAGGCACTACAAGGGATTCGAGGACCCTAAAGTTGCTCGAGAAAATCCACCAGAAAGGATTACCGACCAGAACGATTGGAATATGCTATGCGACAGATGGGAGACTCCCGAATGGAAAGTATGTTTTCTTGTTTTACTTATAGTTATGTGTATGATTTTGTTTGTTTGTTTTTTTTTTTTTTGTAAAAAAGCCTACTAATCATTACTTTTATTTAGAAAAAAGCGGATCAAAATAAGAATAGTCGCTCACAACTCCCCTACAACCATCGAAGTGGATGTAAGTCTTTTGTTCAGAAGCAAGAAGAACTAGTAAGGCAAAGCCATTTTTTCCTTTTGTTTTGTCTTTTTACTCCTTATCTCTTTATTATAACTATTGGTGTGTGTTTTGATCTTAAAGAAAGAACTACATGGTCGTGACATTGGGCCAGTGGATTTGTTCCACGATAGTCATTTTACTGAGAAGAAAGGATGGATCAACGACAGAGCAAAAGAAGTATACGTAAGTTATATTTCTTAGTAATGAGTGTATGTTCTTTGTTTTTTTCTTTTGACCATAGTATATTATGACTGTAGTTGGAAATGGATGGGATACTGAAAGCATCGTCAGAACAAGGGTCCGAACAGATCTCGCAACCTGATGTTCTGAAATAGGTTTTGGAAACTCGATCAGGCCACATCAGAGGTCTTGGTTGGGATCCAAAATCTGGCTCATCTGTCAGTGTCTCGTCTTCAAACCCTCGTGAAAAAGAGCTAGAGCAGAAAGTCGAGATGATGCAATCTGAGATTGATGCACTCAAGAGCAGGGAGGAGATGATGCAATCTGAGATGGATGCACTCAAGGGCAGGGAGGAGATGATGCAATCTGAGTTGGATGCACTCAAGGGCAGGGAGGAGGTGAGGCAATCTGAAATGAATGCGCTCAAGGGCAGGGAGGAGATGTGGGAACAAAGATGGGCTCAAATCCAACATTTGTTTGGTGAACAATCGGGAGGAGGGTCTTCGAATTGATAGGTATGTACCAAGTTTAGGTGATTTATGTACTATACTTAATGTAGTTGACTGGTACATGACTATTATATGATTTGTGTATGTATGTGGCTATCCTGCAGTTATGGTAGCCACTTGATGTTCGAATTAGTCTTATTATTCGCCGTTTATGTTCGTTGCATACTCGTTGAAGTTATTCTTTTAAAGCTTTGAACTAGGTCTTTGAGCTATTATGTAAGTAACTATTTATAGGTAATAAGTTGTATGTGGCTATCCTGCAGTTATGGTAGCCGTTGAGTAGTGATTGTTTTGTTTATTGGTTTTGTTTGAAGGTGTATGAGCATATAAGGGGTGAGTTTCGTTAGATATGTTGTTCTTTTAAAGCTTTGATTTTGTTAGCTTCCCTAGTTCACTTGTTAAAGCTTTTGAACATGTGAGTGTAATTTTTTTTAAGGTTTTCTAGATGTGGGTTGTATAAGTGTTGATGTTGGTCGTTTATGTGCGCTGTATAAGTGTTGATGTTGTTCTTTTAAATCTTTGATTTTGTTAGCTTCCCTAGTTCACTTGTTAATTGGTTTTGTTTGAAGGTTTATGAGCATGGGGGGTGGGTTGTTTTTATGTTCAAATATGAAGTAGTTCTTATTTTTGAAACTTTGTGTATGGAAGGAAGATTTAGTTCATTGTCTTGCTTATTATATAACCTTTGAAAGTTGAGGGATTAGTTACTTCGAAGTATTTTGAGTTCATGTTTCTTAACTTTAGGTTACTTAGCAAAAAGTTGGTTGTTTATGTGCGTTGTATAAGTGTTGAAGTTGTTTTTCTAAAGCTTTGAATTTTTTAGCTTCTCTAGTTCACTTGTTATGCTTCTGTTTGAAGGTTTTCTAATGTGGGGGTGGAGTACGTCTCAAAATTTAGATTTGCTTTTTTGAACTAGCTCTTATGTGTGGAACTTCGAATAAGGAAAAGAAAGATTGCGTTTATGTGGCTTGTGTTTGGAGATAGTGTGGTCCACCCTTTGCAGGCTAATTTTATTTCTGTGCACTGTTCTTTTATGTACATAGGCTATTTATGGGGTAGATGGTTTTTCTTGGAAATTTGACAATACTAATAGGCACTCTGTTCTGTTCATGTTTTGCAGGTTTCATCCATCATGCATGGGAATAACCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTGTTTATCAGAAAATGATGCGAATAGGTCATTGAATCCTTTTCCAGTATAGGCTTTTGGTATTTTTATAATTTTGGAGATATTTTGTATAGACCATTGAATTCGCATTATGTGCAAAGCTGAAGTCCGGAAGTCCTCATACGATTGTTTTTGAAACACATTATATTAAACTCATTATATAAATATTAGTGCTCTTGAACACAATTTCGAATAGATGACTTATAACTTTATTTTGGCACCCATTTGTCATTGATTGGGATAATGGTACTGCACTTTTGTTTATTTGGTTTGTTATCAATAAAATTTGAAATGACATGAACTTTCGCACTCAAACTCTCTAGTTAGCATGGGAATGCTTTTCACTCCAGGACGGCCTAATTCTACAATTGACACTAAAAACAAACCAGGAAAAAAAAACAATGGTGGTCTATGCCGACGCAACTTACGTCGGCGTAGACACTGGAGTCATGCTCTAGGCCAACGCAAGTTTGCGTCGGCATATTGTCTACGCCGACACACGATTGCGTCGGCGTAGGTCATTCAAACCAGCAATTTCAGATTATCAAGGTCGAGGCAATGTGCGTTGGCGTATACATCTACGCCGACGTGTCTACTCCGACGTCCGTGCCGACGCAATCTTCGCGTCGGGGAGTTGTCTACCCCGACGCGGGAGGGGTCTACGCCGACGCAACGATGCGTCGGCGTAGACCGAAAATCTTCTAG

mRNA sequence

ATGTTGGGTCAAAGTCGAGAGCACGATGCATCGACAGTGTATGGAGAGGATGTGGATCCCGTGGTGGTTGGTTCCTCGACTGAGCCTTCATCTGCTCGAGCTTCAGGATCTAACGCATTACAAGGAAGACGAAAGAGAGGGCATAGTCGAAATATCAAAATTGATCGGTATGTGGCTACACACAATAGGATACCCATTCACATTGATGAGTCCGTCGGCAAACCAACGTGTAAGTTTGCTACACAATTCAGTGGGACGATTGGTACCCTCACACGAGATACAATTCCGTTGCATTACAAGGCTTGGCCTGAGGTCCCCCAACAAGTTCGAGACAACGTAAAAGATCGACTCTTGCCGCATATTAACAAGTATGTGGAACGTAAAATAATGGACACTTTTAGGGAGTTTAGGAGCGAGTTGCATAGGCACTACAAGGGATTCGAGGACCCTAAAGTTGCTCGAGAAAATCCACCAGAAAGGATTACCGACCAGAACGATTGGAATATGCTATGCGACAGATGGGAGACTCCCGAATGGAAAAAAGAACTACATGGTCGTGACATTGGGCCAGTGGATTTGTTCCACGATAGTCATTTTACTGAGAAGAAAGGATGGATCAACGACAGAGCAAAAGAAGTATACGTTTTGGAAACTCGATCAGGCCACATCAGAGGTCTTGGTTGGGATCCAAAATCTGGCTCATCTGTCAGTGTCTCGTCTTCAAACCCTCGTGAAAAAGAGCTAGAGCAGAAAGTCGAGATGATGCAATCTGAGATTGATGCACTCAAGAGCAGGGAGGAGATGATGCAATCTGAGATGGATGCACTCAAGGGCAGGGAGGAGATGATGCAATCTGAGTTGGATGCACTCAAGGGCAGGGAGGAGGTGAGGCAATCTGAAATGAATGCGCTCAAGGGCAGGGAGGAGATGTTTCATCCATCATGCATGGGAATAACCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTGTTTATCAGAAAATGATGCGAATAGGCCAACGCAAGTTTGCGTCGGCATATTGTCTACGCCGACACACGATTGCGTCGGCGTAGGTCATTCAAACCAGCAATTTCAGATTATCAAGGTCGAGGCAATGTGCGTTGGCGTATACATCTACGCCGACGTGTCTACTCCGACGTCCGTGCCGACGCAATCTTCGCGTCGGGGAGTTGTCTACCCCGACGCGGGAGGGGTCTACGCCGACGCAACGATGCGTCGGCGTAGACCGAAAATCTTCTAG

Coding sequence (CDS)

ATGTTGGGTCAAAGTCGAGAGCACGATGCATCGACAGTGTATGGAGAGGATGTGGATCCCGTGGTGGTTGGTTCCTCGACTGAGCCTTCATCTGCTCGAGCTTCAGGATCTAACGCATTACAAGGAAGACGAAAGAGAGGGCATAGTCGAAATATCAAAATTGATCGGTATGTGGCTACACACAATAGGATACCCATTCACATTGATGAGTCCGTCGGCAAACCAACGTGTAAGTTTGCTACACAATTCAGTGGGACGATTGGTACCCTCACACGAGATACAATTCCGTTGCATTACAAGGCTTGGCCTGAGGTCCCCCAACAAGTTCGAGACAACGTAAAAGATCGACTCTTGCCGCATATTAACAAGTATGTGGAACGTAAAATAATGGACACTTTTAGGGAGTTTAGGAGCGAGTTGCATAGGCACTACAAGGGATTCGAGGACCCTAAAGTTGCTCGAGAAAATCCACCAGAAAGGATTACCGACCAGAACGATTGGAATATGCTATGCGACAGATGGGAGACTCCCGAATGGAAAAAAGAACTACATGGTCGTGACATTGGGCCAGTGGATTTGTTCCACGATAGTCATTTTACTGAGAAGAAAGGATGGATCAACGACAGAGCAAAAGAAGTATACGTTTTGGAAACTCGATCAGGCCACATCAGAGGTCTTGGTTGGGATCCAAAATCTGGCTCATCTGTCAGTGTCTCGTCTTCAAACCCTCGTGAAAAAGAGCTAGAGCAGAAAGTCGAGATGATGCAATCTGAGATTGATGCACTCAAGAGCAGGGAGGAGATGATGCAATCTGAGATGGATGCACTCAAGGGCAGGGAGGAGATGATGCAATCTGAGTTGGATGCACTCAAGGGCAGGGAGGAGGTGAGGCAATCTGAAATGAATGCGCTCAAGGGCAGGGAGGAGATGTTTCATCCATCATGCATGGGAATAACCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTGTTTATCAGAAAATGATGCGAATAGGCCAACGCAAGTTTGCGTCGGCATATTGTCTACGCCGACACACGATTGCGTCGGCGTAGGTCATTCAAACCAGCAATTTCAGATTATCAAGGTCGAGGCAATGTGCGTTGGCGTATACATCTACGCCGACGTGTCTACTCCGACGTCCGTGCCGACGCAATCTTCGCGTCGGGGAGTTGTCTACCCCGACGCGGGAGGGGTCTACGCCGACGCAACGATGCGTCGGCGTAGACCGAAAATCTTCTAG

Protein sequence

MLGQSREHDASTVYGEDVDPVVVGSSTEPSSARASGSNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKAWPEVPQQVRDNVKDRLLPHINKYVERKIMDTFREFRSELHRHYKGFEDPKVARENPPERITDQNDWNMLCDRWETPEWKKELHGRDIGPVDLFHDSHFTEKKGWINDRAKEVYVLETRSGHIRGLGWDPKSGSSVSVSSSNPREKELEQKVEMMQSEIDALKSREEMMQSEMDALKGREEMMQSELDALKGREEVRQSEMNALKGREEMFHPSCMGITIEEAKKLDHFLCSDCLSENDANRPTQVCVGILSTPTHDCVGVGHSNQQFQIIKVEAMCVGVYIYADVSTPTSVPTQSSRRGVVYPDAGGVYADATMRRRRPKIF
Homology
BLAST of Spg019556 vs. NCBI nr
Match: XP_038887409.1 (poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 243.8 bits (621), Expect = 2.6e-60
Identity = 149/378 (39.42%), Postives = 208/378 (55.03%), Query Frame = 0

Query: 1   MLGQSREHDASTVYGEDVDPVVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIK 60
           +L  S +   + +  +  D   +GSSTE  +  ASGS +        + RR RGHSRN++
Sbjct: 519 VLAHSGQEQETCLLLQADDTPFIGSSTERDATMASGSRSCSRQVSRGEKRRTRGHSRNLE 578

Query: 61  IDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKAWPEVPQQVRDNV 120
           +DR+V  H RI I IDE VGKP C  AT+FS  IGT+ R+TIPL  K W +V ++VRD V
Sbjct: 579 LDRHVNIHGRIRIEIDEEVGKPVCANATKFSNAIGTIARNTIPLRCKDWSDVSKEVRDLV 638

Query: 121 KDRLL---------PHINKYVERKIMDTFREFRSELHRHYKGFEDPKVARENPPERITDQ 180
            D+LL          H+ KYV +++ +TF+E+RS+L++HY+ F+DPK AR  PP+RITD 
Sbjct: 639 VDQLLSYFDFDVGKKHVKKYVLQRVQNTFKEYRSDLYKHYRRFKDPKEARACPPKRITDA 698

Query: 181 NDWNMLCDRWETPEWKKE-------------LH------------------GRDIGPVDL 240
            DWN+LC+RWETPEWKK+             LH                  GRD+  VDL
Sbjct: 699 TDWNLLCNRWETPEWKKKTETNKKSRSKIPYLHRTGSKSFVQVQSEMKIKEGRDVDQVDL 758

Query: 241 FHDSHFTEKKGWINDRAKEVY--------------------------VLETRSGHIRGLG 300
           F  SHF EK GW+N+ AK+ Y                          VL  RSG+I+GLG
Sbjct: 759 FRQSHFCEKDGWVNNNAKDAYLEMQRLMEASFQEDPTPMSSVEVCKQVLGHRSGYIKGLG 818

Query: 301 WDPKSGSSVSVSSSNPREKELEQKVEMMQSEIDALKSREEMMQSEMDALKGREEMMQ--- 303
            +PK  SS SV+S    +KELE+K+E M+ E+  +K+  E M+    AL  +  M +   
Sbjct: 819 LNPKPSSSSSVTSYLQDKKELEKKMEKMEDEMIQMKANYEHMKETNVALTSQLSMWEGRW 878

BLAST of Spg019556 vs. NCBI nr
Match: XP_038887413.1 (uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida])

HSP 1 Score: 233.4 bits (594), Expect = 3.6e-57
Identity = 149/405 (36.79%), Postives = 208/405 (51.36%), Query Frame = 0

Query: 1   MLGQSREHDASTVYGEDVDPVVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIK 60
           +L  S +   + +  +  D   +GSSTE  +  ASGS +        + RR RGHSRN++
Sbjct: 331 VLAHSGQEQETCLLLQADDTPFIGSSTERDATMASGSRSCSRQVSRGEKRRTRGHSRNLE 390

Query: 61  IDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKAWPEVPQQVRDNV 120
           +DR+V  H RI I IDE VGKP C  AT+FS  IGT+ R+TIPL  K W +V ++VRD V
Sbjct: 391 LDRHVNIHGRIRIEIDEEVGKPVCANATKFSNAIGTIARNTIPLRCKDWSDVSKEVRDLV 450

Query: 121 KDRLL------------------------------------PHINKYVERKIMDTFREFR 180
            D+LL                                     H+ KYV +++ +TF+E+R
Sbjct: 451 VDQLLVTLRFIYAFGYYLTCKCLIAQLLLTMQSYFDFDVGKKHVKKYVLQRVQNTFKEYR 510

Query: 181 SELHRHYKGFEDPKVARENPPERITDQNDWNMLCDRWETPEWKKE-------------LH 240
           S+L++HY+ F+DPK AR  PP+RITD  DWN+LC+RWETPEWKK+             LH
Sbjct: 511 SDLYKHYRRFKDPKEARACPPKRITDATDWNLLCNRWETPEWKKKTETNKKSRSKIPYLH 570

Query: 241 ------------------GRDIGPVDLFHDSHFTEKKGWINDRAKEVY------------ 300
                             GRD+  VDLF  SHF EK GW+N+ AK+ Y            
Sbjct: 571 RTGSKSFVQVQSEMKIKEGRDVDQVDLFRQSHFCEKDGWVNNNAKDAYLEMQRLMEASFQ 630

Query: 301 --------------VLETRSGHIRGLGWDPKSGSSVSVSSSNPREKELEQKVEMMQSEID 303
                         VL  RSG+I+GLG +PK  SS SV+S    +KELE+K+E M+ E+ 
Sbjct: 631 EDPTPMSSVEVCKQVLGHRSGYIKGLGLNPKPSSSSSVTSYLQDKKELEKKMEKMEDEMI 690

BLAST of Spg019556 vs. NCBI nr
Match: XP_038887408.1 (poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 233.4 bits (594), Expect = 3.6e-57
Identity = 149/405 (36.79%), Postives = 208/405 (51.36%), Query Frame = 0

Query: 1   MLGQSREHDASTVYGEDVDPVVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIK 60
           +L  S +   + +  +  D   +GSSTE  +  ASGS +        + RR RGHSRN++
Sbjct: 519 VLAHSGQEQETCLLLQADDTPFIGSSTERDATMASGSRSCSRQVSRGEKRRTRGHSRNLE 578

Query: 61  IDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKAWPEVPQQVRDNV 120
           +DR+V  H RI I IDE VGKP C  AT+FS  IGT+ R+TIPL  K W +V ++VRD V
Sbjct: 579 LDRHVNIHGRIRIEIDEEVGKPVCANATKFSNAIGTIARNTIPLRCKDWSDVSKEVRDLV 638

Query: 121 KDRLL------------------------------------PHINKYVERKIMDTFREFR 180
            D+LL                                     H+ KYV +++ +TF+E+R
Sbjct: 639 VDQLLVTLRFIYAFGYYLTCKCLIAQLLLTMQSYFDFDVGKKHVKKYVLQRVQNTFKEYR 698

Query: 181 SELHRHYKGFEDPKVARENPPERITDQNDWNMLCDRWETPEWKKE-------------LH 240
           S+L++HY+ F+DPK AR  PP+RITD  DWN+LC+RWETPEWKK+             LH
Sbjct: 699 SDLYKHYRRFKDPKEARACPPKRITDATDWNLLCNRWETPEWKKKTETNKKSRSKIPYLH 758

Query: 241 ------------------GRDIGPVDLFHDSHFTEKKGWINDRAKEVY------------ 300
                             GRD+  VDLF  SHF EK GW+N+ AK+ Y            
Sbjct: 759 RTGSKSFVQVQSEMKIKEGRDVDQVDLFRQSHFCEKDGWVNNNAKDAYLEMQRLMEASFQ 818

Query: 301 --------------VLETRSGHIRGLGWDPKSGSSVSVSSSNPREKELEQKVEMMQSEID 303
                         VL  RSG+I+GLG +PK  SS SV+S    +KELE+K+E M+ E+ 
Sbjct: 819 EDPTPMSSVEVCKQVLGHRSGYIKGLGLNPKPSSSSSVTSYLQDKKELEKKMEKMEDEMI 878

BLAST of Spg019556 vs. NCBI nr
Match: XP_038887410.1 (poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida])

HSP 1 Score: 216.5 bits (550), Expect = 4.5e-52
Identity = 140/379 (36.94%), Postives = 196/379 (51.72%), Query Frame = 0

Query: 1   MLGQSREHDASTVYGEDVDPVVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIK 60
           +L  S +   + +  +  D   +GSSTE  +  ASGS +        + RR RGHSRN++
Sbjct: 519 VLAHSGQEQETCLLLQADDTPFIGSSTERDATMASGSRSCSRQVSRGEKRRTRGHSRNLE 578

Query: 61  IDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKAWPEVPQQVRDNV 120
           +DR+V  H RI I IDE VGKP C  AT+FS  IGT+ R+TIPL  K W +V ++VRD V
Sbjct: 579 LDRHVNIHGRIRIEIDEEVGKPVCANATKFSNAIGTIARNTIPLRCKDWSDVSKEVRDLV 638

Query: 121 KDRLL------------------------------------PHINKYVERKIMDTFREFR 180
            D+LL                                     H+ KYV +++ +TF+E+R
Sbjct: 639 VDQLLVTLRFIYAFGYYLTCKCLIAQLLLTMQSYFDFDVGKKHVKKYVLQRVQNTFKEYR 698

Query: 181 SELHRHYKGFEDPKVARENPPERITDQNDWNMLCDRWETPEWKKE-------------LH 240
           S+L++HY+ F+DPK AR  PP+RITD  DWN+LC+RWETPEWKK+             LH
Sbjct: 699 SDLYKHYRRFKDPKEARACPPKRITDATDWNLLCNRWETPEWKKKTETNKKSRSKIPYLH 758

Query: 241 ------------------GRDIGPVDLFHDSHFTEKKGWINDRAKEVYVLETRSGHIRGL 300
                             GRD+  VDLF  SHF EK GW+N+ AK+ Y LE +       
Sbjct: 759 RTGSKSFVQVQSEMKIKEGRDVDQVDLFRQSHFCEKDGWVNNNAKDAY-LEMQRLMEASF 818

Query: 301 GWDPKSGSSVSVSSSNPREKELEQKVEMMQSEIDALKSREEMMQSEMDALKGREEMMQ-- 303
             DP   SSV        +KELE+K+E M+ E+  +K+  E M+    AL  +  M +  
Sbjct: 819 QEDPTPMSSVE------DKKELEKKMEKMEDEMIQMKANYEHMKETNVALTSQLSMWEGR 878

BLAST of Spg019556 vs. NCBI nr
Match: XP_038887411.1 (poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida] >XP_038887412.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 1.6e-49
Identity = 115/288 (39.93%), Postives = 155/288 (53.82%), Query Frame = 0

Query: 1   MLGQSREHDASTVYGEDVDPVVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIK 60
           +L  S +   + +  +  D   +GSSTE  +  ASGS +        + RR RGHSRN++
Sbjct: 519 VLAHSGQEQETCLLLQADDTPFIGSSTERDATMASGSRSCSRQVSRGEKRRTRGHSRNLE 578

Query: 61  IDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKAWPEVPQQVRDNV 120
           +DR+V  H RI I IDE VGKP C  AT+FS  IGT+ R+TIPL  K W +V ++VRD V
Sbjct: 579 LDRHVNIHGRIRIEIDEEVGKPVCANATKFSNAIGTIARNTIPLRCKDWSDVSKEVRDLV 638

Query: 121 KDRLL------------------------------------PHINKYVERKIMDTFREFR 180
            D+LL                                     H+ KYV +++ +TF+E+R
Sbjct: 639 VDQLLVTLRFIYAFGYYLTCKCLIAQLLLTMQSYFDFDVGKKHVKKYVLQRVQNTFKEYR 698

Query: 181 SELHRHYKGFEDPKVARENPPERITDQNDWNMLCDRWETPEWKKE-------------LH 215
           S+L++HY+ F+DPK AR  PP+RITD  DWN+LC+RWETPEWKK+             LH
Sbjct: 699 SDLYKHYRRFKDPKEARACPPKRITDATDWNLLCNRWETPEWKKKTETNKKSRSKIPYLH 758

BLAST of Spg019556 vs. ExPASy Swiss-Prot
Match: F4JL28 (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-07
Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 0

Query: 305 KGREEMFHPSCMGITIEEAKKLDHFLCSDCLSENDANRPTQVCVGILSTPTHD 358
           +G ++ +HP+C+G+TIEEAKKLDHF+C++C S++D  +      G  S+P  D
Sbjct: 165 EGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKSQN---GFTSSPADD 214

BLAST of Spg019556 vs. ExPASy Swiss-Prot
Match: F4JGB7 (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 1.6e-04
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0

Query: 312 HPSCMGITIEEAKKLDHFLCSDCLSENDANRPTQVCVGILSTPTHD 358
           H +C+G+TIEEAKKL+HF+C +C S+ D  +  Q   G  S+ T+D
Sbjct: 180 HLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQ--NGFASSTTND 223

BLAST of Spg019556 vs. ExPASy TrEMBL
Match: A0A5A7TFG0 (Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold768G00210 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.6e-42
Identity = 107/280 (38.21%), Postives = 157/280 (56.07%), Query Frame = 0

Query: 26  STEPSSARASG-SNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFS 85
           S +PS+   S      +GR  RG+ RNI++D++V  H +I I I+E  GKP   FA + +
Sbjct: 656 SVDPSTPSGSQLGTKKRGRGVRGYGRNIELDKFVEKHGKIKIEINEEEGKPVTTFAPKIA 715

Query: 86  GTIGTLTRDTIPLHYKAWPEVPQQVRDNVKDRLLPH---------INKYVERKIMDTFRE 145
             IGT  R+TIPL  + W  VP  VR+ V DRL  H         + KY+E K+ + FRE
Sbjct: 716 LGIGTALRNTIPLSCENWKAVPMGVRELVIDRLETHFEFDPTNMVVRKYLEEKMQNIFRE 775

Query: 146 FRSELHRHYKGFEDPKVARENPPERITDQNDWNMLCDRWETPEWKKELHGRDIGPVDLFH 205
           FR++LH++Y  F+D   AR NPP RIT   DWNM+CDRWET  WKK+  G D+  +++FH
Sbjct: 776 FRADLHKYYCQFDDSVEARANPPNRIT-YEDWNMMCDRWETDAWKKK--GCDVDEIEVFH 835

Query: 206 DSHFTEKKGWINDRAKEVY------VLETRSGHIRGLGW----------------DPKSG 265
           ++HF EK+GWIND+AK+ Y      + E+    ++ +                  +P+SG
Sbjct: 836 ETHFREKEGWINDKAKDAYLEMQRIITESTEAGVQTISTAKACEFVLGSRSMQTVNPRSG 895

Query: 266 SSVSVSSSNPREKELEQKVEMMQSEIDALKSREEMMQSEM 274
            S+  + S+ REKE        ++E+  LK   E +  E+
Sbjct: 896 ESLRSNVSSTREKE--------KNEMTYLKEANEKLTHEL 924

BLAST of Spg019556 vs. ExPASy TrEMBL
Match: A0A5A7US78 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001230 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.5e-40
Identity = 107/281 (38.08%), Postives = 156/281 (55.52%), Query Frame = 0

Query: 26  STEPSSARASG-SNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFS 85
           S +PS+   S      +GR  RG+ RNI++D++V  H +I I I+E  GKP   F  + +
Sbjct: 453 SIDPSTPSGSQLGTKKRGRGVRGYGRNIELDKFVQKHGKIKIEINEEEGKPVTTFGPKIA 512

Query: 86  GTIGTLTRDTIPLHYKAWPEVPQQVRDNVKDRLLPH---------INKYVERKIMDTFRE 145
             IGT  R+TIPL  + W  VP  VR+ V D L  H         + KY+E K+ +TFRE
Sbjct: 513 LGIGTAVRNTIPLSCENWKAVPMGVRELVIDWLETHFEFDPTNMVVRKYLEEKMQNTFRE 572

Query: 146 FRSELHRHYKGFEDPKVARENPPERITDQNDWNMLCDRWETPEWKKELHGRDIGPVDLFH 205
           FR+ LH++Y  F+D   AR NPP RIT + DWNM+CDRWET  WKK+  G D+  +++FH
Sbjct: 573 FRANLHKYYCQFDDSVEARANPPNRITHE-DWNMMCDRWETDAWKKKKKGCDVDEIEVFH 632

Query: 206 DSHFTEKKGWINDRAKEVY------VLETRSGHIRGLGWDPKSG---SSVSVSSSNPREK 265
           ++HF +K+GWIND+AK+ Y      + E+    ++ +           S S+ + NPR  
Sbjct: 633 ETHFRKKEGWINDKAKDAYLEMQRIITESTEAGVQTISTAKACKFVLGSRSMQTVNPRSG 692

Query: 266 ELEQKVEMMQSEIDALKSREEMMQSEMDALKGREEMMQSEL 288
                 E ++S +    S  E  ++EM  LK   E +  EL
Sbjct: 693 ------ESLRSNV---SSSREKQKNEMAYLKEANEKLTHEL 723

BLAST of Spg019556 vs. ExPASy TrEMBL
Match: A0A5A7TRX4 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001040 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.7e-36
Identity = 102/299 (34.11%), Postives = 151/299 (50.50%), Query Frame = 0

Query: 37  SNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIP 96
           S+   GR  RG+ RNI++D++V  H +I I I+E  GKP   FA + +  IGT  R+TIP
Sbjct: 688 SSDSDGRGVRGYGRNIELDKFVEKHGKIKIEINEEEGKPVTTFAPKIALGIGTAVRNTIP 747

Query: 97  LHYKAWPEVPQQVRDNVKDRLLPH---------INKYVERKIMDTFREFRSELHRHYKGF 156
           L  + W  VP  VR+ V D L  H         + KY+E K+ +TFREFR++LH++Y  F
Sbjct: 748 LSCENWKAVPMGVRELVIDWLETHFEFDPTNMVVRKYLEEKMQNTFREFRADLHKYYCQF 807

Query: 157 EDPKVARENPPERITDQNDWNMLCDRWETPEWKKELH----------------------- 216
           +D   AR NP  RIT + DWNM+CDRWET  WKK+                         
Sbjct: 808 DDLVEARANPRNRITHE-DWNMMCDRWETDAWKKKRETNKRSHSAVKFNHVTGAKSFLQV 867

Query: 217 --------GRDIGPVDLFHDSHFTEKKGWINDRAKEVY------VLETRSGHIRGLGW-- 274
                   G D+  +++FH++HF EK+GW ND+AK+ Y      + E+    ++ +    
Sbjct: 868 RHELKKKKGYDVDEIEVFHETHFREKEGWNNDKAKDAYLEMQRIIRESTEAGVQTISTAK 927

BLAST of Spg019556 vs. ExPASy TrEMBL
Match: A0A5A7SPZ3 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.6e-33
Identity = 105/329 (31.91%), Postives = 159/329 (48.33%), Query Frame = 0

Query: 33  RASGSNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTR 92
           R+      + R  RG+ RNI++D++V  H ++ I I+E  GKP   FA + +  IGT  R
Sbjct: 175 RSQSRTKKRERGVRGYGRNIELDKFVKKHGKVKIEINEEEGKPVTTFAPKIALGIGTAVR 234

Query: 93  DTIPLHYKAWPEVPQQVRDNVKDRLLPH---------INKYVERKIMDTFREFRSELHRH 152
           +TI L  + W  +P  V++ + DR   H         + KY++ K+ + FREFR+ LH++
Sbjct: 235 NTILLSCENWKAIPMDVKELMIDRSETHFEFDPTTMIVRKYLDEKMQNIFREFRAGLHKY 294

Query: 153 YKGFEDPKVARENPPERITDQNDWNMLCDRWETPEWKKELH------------------- 212
           Y  F+D   AR NPP++IT + DWNM+CDRWET  WKK+                     
Sbjct: 295 YCKFDDFIEARANPPDKITHE-DWNMMCDRWETDAWKKKQETNKRSRSAVKFNHVIGAKS 354

Query: 213 ------------GRDIGPVDLFHDSHFTEKKGWINDRAKEVY------------------ 272
                       G D+  V++F ++HF EK+GWIND+AK+ Y                  
Sbjct: 355 FLQVRHELEKKKGCDVDEVEVFQETHFREKEGWINDKAKDAYRIIAESTEAGVQTISSAK 414

Query: 273 ----VLETRSGHIRGLGWDPKSGSSVSVSSSNPREKELEQKVEMMQSEIDALKSREEMMQ 300
               VL + S  I  L    KSG S+  + S+ REKE        ++E+  LK   E + 
Sbjct: 415 ACKIVLGSHSMQIVNL----KSGESLGSNVSSTREKE--------KNEMAYLKEVNEKLT 474

BLAST of Spg019556 vs. ExPASy TrEMBL
Match: A0A6J1DUH3 (uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023212 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.4e-29
Identity = 81/221 (36.65%), Postives = 116/221 (52.49%), Query Frame = 0

Query: 121 INKYVERKIMDTFREFRSELHRHYKGFEDPKVARENPPERITDQNDWNMLCDRWETPEWK 180
           +NK++E+++  +F+++RS+LH++Y  FEDP  AR NPPER+T+  DWN LCDRWETPEWK
Sbjct: 30  VNKFIEQQMQISFKQYRSDLHQYYCEFEDPVEARANPPERLTNPEDWNHLCDRWETPEWK 89

Query: 181 -------------------------------KELHGRDIGPVDLFHDSHFTEKKGWINDR 240
                                          K   G DIGPVDLF +SH+ EK G +ND 
Sbjct: 90  EITKKNKKNRAKLPFNHRAGSKSFLQLQHELKIKEGSDIGPVDLFGESHYNEKDGLVNDN 149

Query: 241 AKEVY--------------------------VLETRSGHIRGLGWDP-----KSGSSVSV 280
           A++ Y                          VL  R  H++GLG+ P     K GSS +V
Sbjct: 150 AEDAYENMQNLIKAPTQEGCEPVTQPEACRKVLGDRPDHVKGLGYGPQPTLCKRGSSSNV 209

BLAST of Spg019556 vs. TAIR 10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-08
Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 0

Query: 305 KGREEMFHPSCMGITIEEAKKLDHFLCSDCLSENDANRPTQVCVGILSTPTHD 358
           +G ++ +HP+C+G+TIEEAKKLDHF+C++C S++D  +      G  S+P  D
Sbjct: 165 EGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKSQN---GFTSSPADD 214

BLAST of Spg019556 vs. TAIR 10
Match: AT4G22140.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-08
Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 0

Query: 305 KGREEMFHPSCMGITIEEAKKLDHFLCSDCLSENDANRPTQVCVGILSTPTHD 358
           +G ++ +HP+C+G+TIEEAKKLDHF+C++C S++D  +      G  S+P  D
Sbjct: 165 EGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKSQN---GFTSSPADD 214

BLAST of Spg019556 vs. TAIR 10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 48.9 bits (115), Expect = 1.2e-05
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0

Query: 312 HPSCMGITIEEAKKLDHFLCSDCLSENDANRPTQVCVGILSTPTHD 358
           H +C+G+TIEEAKKL+HF+C +C S+ D  +  Q   G  S+ T+D
Sbjct: 133 HLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQ--NGFASSTTND 176

BLAST of Spg019556 vs. TAIR 10
Match: AT4G39100.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.3e-04
Identity = 18/26 (69.23%), Postives = 21/26 (80.77%), Query Frame = 0

Query: 309 EMFHPSCMGITIEEAKKLDHFLCSDC 335
           E FHPSC+G TIEEAKK D+F C +C
Sbjct: 162 EWFHPSCIGTTIEEAKKPDNFYCEEC 187

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038887409.12.6e-6039.42poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida][more]
XP_038887413.13.6e-5736.79uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida][more]
XP_038887408.13.6e-5736.79poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida][more]
XP_038887410.14.5e-5236.94poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida][more]
XP_038887411.11.6e-4939.93poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida] >XP_038887412... [more]
Match NameE-valueIdentityDescription
F4JL281.6e-0745.28Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=... [more]
F4JGB71.6e-0447.83Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04... [more]
Match NameE-valueIdentityDescription
A0A5A7TFG04.6e-4238.21Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuw... [more]
A0A5A7US781.5e-4038.08Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TRX41.7e-3634.11DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7SPZ36.6e-3331.91Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE... [more]
A0A6J1DUH34.4e-2936.65uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
AT4G22140.11.1e-0845.28PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot... [more]
AT4G22140.21.1e-0845.28PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot... [more]
AT4G04260.11.2e-0547.83Bromo-adjacent homology (BAH) domain-containing protein [more]
AT4G39100.11.3e-0469.23PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 245..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availablePANTHERPTHR33499FAMILY NOT NAMEDcoord: 29..297
NoneNo IPR availablePANTHERPTHR33499:SF13TRANSPOSASE, PTTA/EN/SPM, PLANT-RELATEDcoord: 29..297
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 237..341
e-value: 8.5E-6
score: 27.7
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 309..338

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg019556.1Spg019556.1mRNA