Spg019556 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGGTCAAAGTCGAGAGCACGATGCATCGACAGTGTATGGAGAGGATGTGGATCCCGTGGTGGTTGGTTCCTCGACTGAGCCTTCATCTGCTCGAGCTTCAGGTAATAATCATATCATACAAACTTAAGTTTTTAAAGGTTATTTCGTTATAACAACTTTTTCTTTGTTTCAGGATCTAACGCATTACAAGGAAGACGAAAGAGAGGGCATAGTCGAAATATCAAAATTGATCGGTATGTGGCTACACACAATAGGATACCCATTCACATTGATGAGTCCGTCGGCAAACCAACGTGTAAGTTTGCTACACAATTCAGTGGGACGATTGGTACCCTCACACGAGATACAATTCCGTTGCATTACAAGGCTTGGCCTGAGGTCCCCCAACAAGTTCGAGACAACGTAAAAGATCGACTCTTGGTACGTTCACATTTTTTGGTTATACTATTTGAATCATACATACTTGTTCACTCTTTTTGTTATTAACCATGCATACGAAATGGGATGTGGATTTGTCGAAGCCGCATATTAACAAGTATGTGGAACGTAAAATAATGGACACTTTTAGGGAGTTTAGGAGCGAGTTGCATAGGCACTACAAGGGATTCGAGGACCCTAAAGTTGCTCGAGAAAATCCACCAGAAAGGATTACCGACCAGAACGATTGGAATATGCTATGCGACAGATGGGAGACTCCCGAATGGAAAGTATGTTTTCTTGTTTTACTTATAGTTATGTGTATGATTTTGTTTGTTTGTTTTTTTTTTTTTTGTAAAAAAGCCTACTAATCATTACTTTTATTTAGAAAAAAGCGGATCAAAATAAGAATAGTCGCTCACAACTCCCCTACAACCATCGAAGTGGATGTAAGTCTTTTGTTCAGAAGCAAGAAGAACTAGTAAGGCAAAGCCATTTTTTCCTTTTGTTTTGTCTTTTTACTCCTTATCTCTTTATTATAACTATTGGTGTGTGTTTTGATCTTAAAGAAAGAACTACATGGTCGTGACATTGGGCCAGTGGATTTGTTCCACGATAGTCATTTTACTGAGAAGAAAGGATGGATCAACGACAGAGCAAAAGAAGTATACGTAAGTTATATTTCTTAGTAATGAGTGTATGTTCTTTGTTTTTTTCTTTTGACCATAGTATATTATGACTGTAGTTGGAAATGGATGGGATACTGAAAGCATCGTCAGAACAAGGGTCCGAACAGATCTCGCAACCTGATGTTCTGAAATAGGTTTTGGAAACTCGATCAGGCCACATCAGAGGTCTTGGTTGGGATCCAAAATCTGGCTCATCTGTCAGTGTCTCGTCTTCAAACCCTCGTGAAAAAGAGCTAGAGCAGAAAGTCGAGATGATGCAATCTGAGATTGATGCACTCAAGAGCAGGGAGGAGATGATGCAATCTGAGATGGATGCACTCAAGGGCAGGGAGGAGATGATGCAATCTGAGTTGGATGCACTCAAGGGCAGGGAGGAGGTGAGGCAATCTGAAATGAATGCGCTCAAGGGCAGGGAGGAGATGTGGGAACAAAGATGGGCTCAAATCCAACATTTGTTTGGTGAACAATCGGGAGGAGGGTCTTCGAATTGATAGGTATGTACCAAGTTTAGGTGATTTATGTACTATACTTAATGTAGTTGACTGGTACATGACTATTATATGATTTGTGTATGTATGTGGCTATCCTGCAGTTATGGTAGCCACTTGATGTTCGAATTAGTCTTATTATTCGCCGTTTATGTTCGTTGCATACTCGTTGAAGTTATTCTTTTAAAGCTTTGAACTAGGTCTTTGAGCTATTATGTAAGTAACTATTTATAGGTAATAAGTTGTATGTGGCTATCCTGCAGTTATGGTAGCCGTTGAGTAGTGATTGTTTTGTTTATTGGTTTTGTTTGAAGGTGTATGAGCATATAAGGGGTGAGTTTCGTTAGATATGTTGTTCTTTTAAAGCTTTGATTTTGTTAGCTTCCCTAGTTCACTTGTTAAAGCTTTTGAACATGTGAGTGTAATTTTTTTTAAGGTTTTCTAGATGTGGGTTGTATAAGTGTTGATGTTGGTCGTTTATGTGCGCTGTATAAGTGTTGATGTTGTTCTTTTAAATCTTTGATTTTGTTAGCTTCCCTAGTTCACTTGTTAATTGGTTTTGTTTGAAGGTTTATGAGCATGGGGGGTGGGTTGTTTTTATGTTCAAATATGAAGTAGTTCTTATTTTTGAAACTTTGTGTATGGAAGGAAGATTTAGTTCATTGTCTTGCTTATTATATAACCTTTGAAAGTTGAGGGATTAGTTACTTCGAAGTATTTTGAGTTCATGTTTCTTAACTTTAGGTTACTTAGCAAAAAGTTGGTTGTTTATGTGCGTTGTATAAGTGTTGAAGTTGTTTTTCTAAAGCTTTGAATTTTTTAGCTTCTCTAGTTCACTTGTTATGCTTCTGTTTGAAGGTTTTCTAATGTGGGGGTGGAGTACGTCTCAAAATTTAGATTTGCTTTTTTGAACTAGCTCTTATGTGTGGAACTTCGAATAAGGAAAAGAAAGATTGCGTTTATGTGGCTTGTGTTTGGAGATAGTGTGGTCCACCCTTTGCAGGCTAATTTTATTTCTGTGCACTGTTCTTTTATGTACATAGGCTATTTATGGGGTAGATGGTTTTTCTTGGAAATTTGACAATACTAATAGGCACTCTGTTCTGTTCATGTTTTGCAGGTTTCATCCATCATGCATGGGAATAACCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTGTTTATCAGAAAATGATGCGAATAGGTCATTGAATCCTTTTCCAGTATAGGCTTTTGGTATTTTTATAATTTTGGAGATATTTTGTATAGACCATTGAATTCGCATTATGTGCAAAGCTGAAGTCCGGAAGTCCTCATACGATTGTTTTTGAAACACATTATATTAAACTCATTATATAAATATTAGTGCTCTTGAACACAATTTCGAATAGATGACTTATAACTTTATTTTGGCACCCATTTGTCATTGATTGGGATAATGGTACTGCACTTTTGTTTATTTGGTTTGTTATCAATAAAATTTGAAATGACATGAACTTTCGCACTCAAACTCTCTAGTTAGCATGGGAATGCTTTTCACTCCAGGACGGCCTAATTCTACAATTGACACTAAAAACAAACCAGGAAAAAAAAACAATGGTGGTCTATGCCGACGCAACTTACGTCGGCGTAGACACTGGAGTCATGCTCTAGGCCAACGCAAGTTTGCGTCGGCATATTGTCTACGCCGACACACGATTGCGTCGGCGTAGGTCATTCAAACCAGCAATTTCAGATTATCAAGGTCGAGGCAATGTGCGTTGGCGTATACATCTACGCCGACGTGTCTACTCCGACGTCCGTGCCGACGCAATCTTCGCGTCGGGGAGTTGTCTACCCCGACGCGGGAGGGGTCTACGCCGACGCAACGATGCGTCGGCGTAGACCGAAAATCTTCTAG ATGTTGGGTCAAAGTCGAGAGCACGATGCATCGACAGTGTATGGAGAGGATGTGGATCCCGTGGTGGTTGGTTCCTCGACTGAGCCTTCATCTGCTCGAGCTTCAGGATCTAACGCATTACAAGGAAGACGAAAGAGAGGGCATAGTCGAAATATCAAAATTGATCGGTATGTGGCTACACACAATAGGATACCCATTCACATTGATGAGTCCGTCGGCAAACCAACGTGTAAGTTTGCTACACAATTCAGTGGGACGATTGGTACCCTCACACGAGATACAATTCCGTTGCATTACAAGGCTTGGCCTGAGGTCCCCCAACAAGTTCGAGACAACGTAAAAGATCGACTCTTGCCGCATATTAACAAGTATGTGGAACGTAAAATAATGGACACTTTTAGGGAGTTTAGGAGCGAGTTGCATAGGCACTACAAGGGATTCGAGGACCCTAAAGTTGCTCGAGAAAATCCACCAGAAAGGATTACCGACCAGAACGATTGGAATATGCTATGCGACAGATGGGAGACTCCCGAATGGAAAAAAGAACTACATGGTCGTGACATTGGGCCAGTGGATTTGTTCCACGATAGTCATTTTACTGAGAAGAAAGGATGGATCAACGACAGAGCAAAAGAAGTATACGTTTTGGAAACTCGATCAGGCCACATCAGAGGTCTTGGTTGGGATCCAAAATCTGGCTCATCTGTCAGTGTCTCGTCTTCAAACCCTCGTGAAAAAGAGCTAGAGCAGAAAGTCGAGATGATGCAATCTGAGATTGATGCACTCAAGAGCAGGGAGGAGATGATGCAATCTGAGATGGATGCACTCAAGGGCAGGGAGGAGATGATGCAATCTGAGTTGGATGCACTCAAGGGCAGGGAGGAGGTGAGGCAATCTGAAATGAATGCGCTCAAGGGCAGGGAGGAGATGTTTCATCCATCATGCATGGGAATAACCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTGTTTATCAGAAAATGATGCGAATAGGCCAACGCAAGTTTGCGTCGGCATATTGTCTACGCCGACACACGATTGCGTCGGCGTAGGTCATTCAAACCAGCAATTTCAGATTATCAAGGTCGAGGCAATGTGCGTTGGCGTATACATCTACGCCGACGTGTCTACTCCGACGTCCGTGCCGACGCAATCTTCGCGTCGGGGAGTTGTCTACCCCGACGCGGGAGGGGTCTACGCCGACGCAACGATGCGTCGGCGTAGACCGAAAATCTTCTAG ATGTTGGGTCAAAGTCGAGAGCACGATGCATCGACAGTGTATGGAGAGGATGTGGATCCCGTGGTGGTTGGTTCCTCGACTGAGCCTTCATCTGCTCGAGCTTCAGGATCTAACGCATTACAAGGAAGACGAAAGAGAGGGCATAGTCGAAATATCAAAATTGATCGGTATGTGGCTACACACAATAGGATACCCATTCACATTGATGAGTCCGTCGGCAAACCAACGTGTAAGTTTGCTACACAATTCAGTGGGACGATTGGTACCCTCACACGAGATACAATTCCGTTGCATTACAAGGCTTGGCCTGAGGTCCCCCAACAAGTTCGAGACAACGTAAAAGATCGACTCTTGCCGCATATTAACAAGTATGTGGAACGTAAAATAATGGACACTTTTAGGGAGTTTAGGAGCGAGTTGCATAGGCACTACAAGGGATTCGAGGACCCTAAAGTTGCTCGAGAAAATCCACCAGAAAGGATTACCGACCAGAACGATTGGAATATGCTATGCGACAGATGGGAGACTCCCGAATGGAAAAAAGAACTACATGGTCGTGACATTGGGCCAGTGGATTTGTTCCACGATAGTCATTTTACTGAGAAGAAAGGATGGATCAACGACAGAGCAAAAGAAGTATACGTTTTGGAAACTCGATCAGGCCACATCAGAGGTCTTGGTTGGGATCCAAAATCTGGCTCATCTGTCAGTGTCTCGTCTTCAAACCCTCGTGAAAAAGAGCTAGAGCAGAAAGTCGAGATGATGCAATCTGAGATTGATGCACTCAAGAGCAGGGAGGAGATGATGCAATCTGAGATGGATGCACTCAAGGGCAGGGAGGAGATGATGCAATCTGAGTTGGATGCACTCAAGGGCAGGGAGGAGGTGAGGCAATCTGAAATGAATGCGCTCAAGGGCAGGGAGGAGATGTTTCATCCATCATGCATGGGAATAACCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTGTTTATCAGAAAATGATGCGAATAGGCCAACGCAAGTTTGCGTCGGCATATTGTCTACGCCGACACACGATTGCGTCGGCGTAGGTCATTCAAACCAGCAATTTCAGATTATCAAGGTCGAGGCAATGTGCGTTGGCGTATACATCTACGCCGACGTGTCTACTCCGACGTCCGTGCCGACGCAATCTTCGCGTCGGGGAGTTGTCTACCCCGACGCGGGAGGGGTCTACGCCGACGCAACGATGCGTCGGCGTAGACCGAAAATCTTCTAG MLGQSREHDASTVYGEDVDPVVVGSSTEPSSARASGSNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKAWPEVPQQVRDNVKDRLLPHINKYVERKIMDTFREFRSELHRHYKGFEDPKVARENPPERITDQNDWNMLCDRWETPEWKKELHGRDIGPVDLFHDSHFTEKKGWINDRAKEVYVLETRSGHIRGLGWDPKSGSSVSVSSSNPREKELEQKVEMMQSEIDALKSREEMMQSEMDALKGREEMMQSELDALKGREEVRQSEMNALKGREEMFHPSCMGITIEEAKKLDHFLCSDCLSENDANRPTQVCVGILSTPTHDCVGVGHSNQQFQIIKVEAMCVGVYIYADVSTPTSVPTQSSRRGVVYPDAGGVYADATMRRRRPKIF Homology
BLAST of Spg019556 vs. NCBI nr
Match: XP_038887409.1 (poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 243.8 bits (621), Expect = 2.6e-60 Identity = 149/378 (39.42%), Postives = 208/378 (55.03%), Query Frame = 0
BLAST of Spg019556 vs. NCBI nr
Match: XP_038887413.1 (uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]) HSP 1 Score: 233.4 bits (594), Expect = 3.6e-57 Identity = 149/405 (36.79%), Postives = 208/405 (51.36%), Query Frame = 0
BLAST of Spg019556 vs. NCBI nr
Match: XP_038887408.1 (poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 233.4 bits (594), Expect = 3.6e-57 Identity = 149/405 (36.79%), Postives = 208/405 (51.36%), Query Frame = 0
BLAST of Spg019556 vs. NCBI nr
Match: XP_038887410.1 (poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida]) HSP 1 Score: 216.5 bits (550), Expect = 4.5e-52 Identity = 140/379 (36.94%), Postives = 196/379 (51.72%), Query Frame = 0
BLAST of Spg019556 vs. NCBI nr
Match: XP_038887411.1 (poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida] >XP_038887412.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida]) HSP 1 Score: 208.0 bits (528), Expect = 1.6e-49 Identity = 115/288 (39.93%), Postives = 155/288 (53.82%), Query Frame = 0
BLAST of Spg019556 vs. ExPASy Swiss-Prot
Match: F4JL28 (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.6e-07 Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of Spg019556 vs. ExPASy Swiss-Prot
Match: F4JGB7 (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2) HSP 1 Score: 48.9 bits (115), Expect = 1.6e-04 Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0
BLAST of Spg019556 vs. ExPASy TrEMBL
Match: A0A5A7TFG0 (Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold768G00210 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 4.6e-42 Identity = 107/280 (38.21%), Postives = 157/280 (56.07%), Query Frame = 0
BLAST of Spg019556 vs. ExPASy TrEMBL
Match: A0A5A7US78 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001230 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 1.5e-40 Identity = 107/281 (38.08%), Postives = 156/281 (55.52%), Query Frame = 0
BLAST of Spg019556 vs. ExPASy TrEMBL
Match: A0A5A7TRX4 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001040 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.7e-36 Identity = 102/299 (34.11%), Postives = 151/299 (50.50%), Query Frame = 0
BLAST of Spg019556 vs. ExPASy TrEMBL
Match: A0A5A7SPZ3 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 6.6e-33 Identity = 105/329 (31.91%), Postives = 159/329 (48.33%), Query Frame = 0
BLAST of Spg019556 vs. ExPASy TrEMBL
Match: A0A6J1DUH3 (uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023212 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 4.4e-29 Identity = 81/221 (36.65%), Postives = 116/221 (52.49%), Query Frame = 0
BLAST of Spg019556 vs. TAIR 10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 58.9 bits (141), Expect = 1.1e-08 Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of Spg019556 vs. TAIR 10
Match: AT4G22140.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 58.9 bits (141), Expect = 1.1e-08 Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of Spg019556 vs. TAIR 10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 48.9 bits (115), Expect = 1.2e-05 Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0
BLAST of Spg019556 vs. TAIR 10
Match: AT4G39100.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 45.4 bits (106), Expect = 1.3e-04 Identity = 18/26 (69.23%), Postives = 21/26 (80.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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