Spg019261 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg019261
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUbiquitin-conjugating enzyme
Locationscaffold1: 44991081 .. 44995684 (-)
RNA-Seq ExpressionSpg019261
SyntenySpg019261
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAAACGTGTGCGCACAAAGACAAATGGAGTGAGCACACTGGATATTTGGTCGTGGAAGTATTTGGTTCCATGGATGAGGGGAGACCTATTTGCTCGAGTATGTGTCCTGTTGGCTGCTTTGTTTGTAAAGGCTTATTCGCCCTAATTTGTTGGGAAATGTAATATGCTTGTCTGACCGGCTGTTTAAGACTGAGATCTAGGGGTTTTGTTTATGGCGAGGATACAAGAGAGGATTTATTGAGGTCCAACAAGCTGGCCTTTTAGTTTCGTTAAGGCGCGGGTTTGCAGTAGCTAGTTGTTAGTTTTCTTGATTGAATTATGTGTCTTTAAATGTTTTCTTTGTGGTCTTGTTTGTCCTGTTAATGGAATTAAATGGTATCACCTGCTTTTCCATCCTTTTGGTCCATGTTGAAATAAGCTCTAGACTTTCATTTTAAACCTCCAATTTAAATTTACTTAAAGAAACACGGTTGAAGTGGTCCATTGTTTCGTTGTGGTAATATCATGGAAGATAGAGGTGGCTCCTTCTCATTTGATTGAACTTGTTTCTTGTAACCTAGTTCTTCATCGAAGTTTCACTTGGTTGAATTTTGATCTTTTGTATTCTTCTTCAACGGTGTTTTGTCATGTTCGAATTGAGCATATTCATTTTTCTGCATAGGGTGTGTGCGTTTTTTAGGAATGAAGTTAAAATTGTTGTTTTTATTTATTTTCAGTCGGTGAGAATGTCTACTCCTGCGAGGAAAAGACTGATGAGAGACTTCAAGAGGTTGCAACAAGATCCACCTGCTGGCATTAGTGGTGCTCCCCAAAACAATAATATCATGCTATGGAATGCTGTTATATTTGGGTAAGTTGGGAAAATAAATTACGAACTTTATCTTTTTTCTTATCAGAATTTTTATACATATCCACGATTGCTTCTATCACTAACTTATGCTATGGTTCTTGACATGTTTTTCTGTTGGTTTTTGCAGGGCAGATGATACACCTTGGGATGGAGGTATTCTCAATTTTTGCCTTTTTGGGCCGAAGTGACTTCTTACGAAGACAACAACTTTGTATTAGAGTAAAGATTTCAAATGATTTGCTTATTTCTTGTTTGATGATTTCACTTTGTTTATCAGTCCAAAATTATAACTAATCGTTATCATTATTACTGCAATAAAAATAACAATATGTTCACTTCTCTCTGTTATGTAGATATATGAAGCTATTAACTTAGAACAGTTAAATTAATTTTTCAATCTTAAAATTATATGGTTCTGATTTGCTAATTTGAATATAGGATGTGTGTTATATTTTCTGGTGGAAAACTCAAGAATAATTAGAACTTTCTAAACTTCTGATTATGGTTTCCTGAGAAAAAAATGTCAAGTTGCTTTCATCTCTCCTGGTGCAAGTTATGGGAATGTATTCTGAAGGATCCATGTATTTTGATTTTCTTTTCCAAACATTGAAATGGATATTAGCAACTTCTTTAATTTTCTGAGTACTTCTATCAATTTTGTTTCCAATTTAGGTAGTTTCCTTAAGTAATTTTTATTTATGAACTTCTCATGTAGGGTCCGTTTGGAATACATTTTAATTTAAATGTTTTTCAAGAATGCATTCTTTAAAAAATATTTTGTATAAAAATTGTTTAGAATTTAAACACTCATGTGTTTGGTTACATTTCTTATAAGTGTTTTTATACATAAGTTATTGTATACTTAAGAACTCTTTTTAAAAAAAGTTGGTTTCAAGTGTTTCTCTCAAAATGATTTATTTCTCAATCTCATTTTCTAATAAGTCATTTTTAGTGGTAACCAAACACTATAATTTTTTTCAGAATGATTTATTTTCAAAATTAAACACTTGGAAAGTTAAACCAAACACACCCGTAGTTTATGAATTATAAGTTGGCTACTATTTTTTTGAGTTTATCAGGTACGTCTAAGCTGATCCTTCAGTTCACTGAGGATTATCCAAATAAGCCACCGACAGTTCGCTTTGTGTCTAGAATGTTCCACCCTAATAGTAAGTTCACAATCTCAAGGAACGTATGCTTTATGTGATTCGTTCTGGGTCAATTTGAGAGAGCTTTTTGTAATCTCCATTGGCACTAGGTTTAAGAAGATGCCAAGTTCTCCTCTATGTTTTATGTACAACTACTTTTTGTGAACACAGTGTTTCTTGTTAAGTTCTTATATTTTGCTTAGCTAATTTTATTGTGTATTTTTCATATTGTACTTAGCTTATTTTCTTTTGCTAACAAATGAAAAAATCCATCTTTTTAACACTATTGTGTCTGCTTTCATTAAACCTTTATATGAACCTGACATGCTATGTTTGATATGTATGGTATGTTTGGCTTAGGCCTGGGTGATTTTAATGGTTGAAAGGCAAGAGAGAGAGAGAGAAACTATCTTGTAAAACAACGAAGTAAATGTTTATCTTAGGTTACAATGTGAGTTGTGACTATTTTGTTTTTAATTTTTCTGTACATGTTGCTAAGCCTGCGCTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCATTTGCCTTTTCCCATTGCCTTCTATTTATGCTGATGGAAGCATTTGTTTGGACATTCTGCAAAATCAGTGGAGCCCAATCTATGATGTAGCAGCTATACTCATCTCTATTCAGGTACCACATAATCAATTTTGCCTTTATATATGCAAAGGCTGAATTTTTATTTTTTTTTTATCGCTGTAAGATTAATTGCTCCTTTTATCATTTTATGGGTACAAATAAAAAGCATTGATATGAATATACCTTTTTTGCAATTTTATAAAGAACGATTTTGGTGTTCTCTATCTACTCTAAATTCAATGGCCAATTGATTTGGTCCCTCATTTGGTTGAGTATCTGATACCAGATGAGTGCTGTCTCTTGGAGGCTTCAAGTTAACATATTGAGTTATTATACACTTATTATTTAGAAAAACCTGCTTTCATTGAGAAAAAAAAAATGAAAGAATACAAGCTATATGAAAGAGTTTAAATATTACAAATCAGATTTTGGTTTTTTTTTTTTCCTTTGGTGGGTATAATAGACTGGTAGCAATGTGTTTGCTAATGCACTTTCTCATCCTTTTCAAAATGTGATTGATCATTGAAAAATTTTCAGATTGCGGGATTGACGAATAACTCCTACCTAGATGAATCCCATGAGATCTGACACTATGTACAGGAACATAAGAGTCTTGGTCAACATGTGCTTCATGTGCCAGTTATTTTTCTGATATTTTGCCTCCTTATGGTTGCAATTATGGTAGATGCTTGTCAATCTTGCAGAAGAGGTTGGATGCTATGTTATATGCTGGTCTAACTGCGAAACATAAGGAGTCTGCAACGATATTTGCAAACGTGGTTGGTGCACAGGTGATTTCACAACTAAGAGATGCCAACTTGAGTATGGACACTTTAGCTGACAACCAATCAGGTTTTGAGAATCATTGAAGGTCCTATTCTTCTCTTTCCAAAATCCTAAAAGAATCTTTGCTTTTTTTTTTTTTGGTTGAAGTTTTGCCTTCTCGAATAATTTATGAATGGCCAGCTCCATCAAAGTCTAACCTTGTAAGAGTTTATACCGCAGCTTTGCTAAGACTTGAAATGGAGTATTTATTTTTGGTCAGACGAGAATTTTTTTATGGTAGGAGGTGAATGGAAGCCTCTTCAGATGCTAATTTGGTGTTTTGCTGATATAGTTTTGTAACATTATTATTATCCTTGTTCAACTTGATTGTCATTTCTATGGTTAGTTTAACAATTTTGTAATTTGGTGTTTGATATTATTTTGCTGACTTTCTTGCAACGTCCTTCAATGATTGTTTAGATTTAGATTGTGCTTGATGCGAGACCTAACATGCTTAGTTTTAGAATATTTGGAGTCTTTTTTCCCCTTTCGTACTATAACGTCGTATTAACTGTAGACTGTCTTTGAAAATCAGGGTCAAGATTCTCAAGAAGTTCAAGAGTGATCATGTTGATCGTCCTTGGACACATGCTAAGTTGGAGTGGATGTTGTTTCTCATGGATCCACTGGAAAAGAAAATGATCAGGTATGCCTTACACCGTGATCTGGACAAACCTTGTGCCTTTGTTATTCGAGTTTGTTGTTGTATTTGAGATAAAGTAGGTTATTGGTTATCTTATTTGTGAGTTGCAATTTGTTAGCTCAAAGGCTTATTTAGCAGAGATGCAAATATATATACTTCATGCAAGCTTGCGTATTTCACTGATATTAGTTGGTTGGCTCTACTTTTTCGATTTTGTTGAACTTGTTCCTTGTCTCGAATTAAGTATATACCAAACAAATTTCAGATTCTTCACCCTATCAAGGTTAGAATGCAAAGTATTTCATTATTTTCTGTTTATGGCATCTCTCTATCTGATATCGTGTTAATTTAAGAAGTTCTTGCATAGAGCTTTTGTAACTATGATCTTTCATTTACTTGTGCTATTTTGGAGAGTTTTGTAACTCTACTGATTAGTTTCGATGTTAAGCTCATTTCTTTTAAGTGTAGGATGTGTTTGTTCTGGTTGTACATTAAGCTCATTTCTTTTAAGTGTAGGACTCCGTGTTTCGGTTGTAA

mRNA sequence

ATGTCCAAACGTGTGCGCACAAAGACAAATGGAGTGAGCACACTGGATATTTGGTCGTGGAAGTATTTGGTTCCATGGATGAGGGGAGACCTATTTGCTCGATCGGTGAGAATGTCTACTCCTGCGAGGAAAAGACTGATGAGAGACTTCAAGAGGTTGCAACAAGATCCACCTGCTGGCATTAGTGGTGCTCCCCAAAACAATAATATCATGCTATGGAATGCTGTTATATTTGGGGCAGATGATACACCTTGGGATGGAGGTACGTCTAAGCTGATCCTTCAGTTCACTGAGGATTATCCAAATAAGCCACCGACAGTTCGCTTTGTGTCTAGAATGTTCCACCCTAATACAGCTATACTCATCTCTATTCAGAAGAGGTTGGATGCTATGTTATATGCTGGTCTAACTGCGAAACATAAGGAGTCTGCAACGATATTTGCAAACGTGGTTGGTGCACAGGTGATTTCACAACTAAGAGATGCCAACTTGAGTATGGACACTTTAGCTGACAACCAATCAGTTGGAGTGGATGTTGTTTCTCATGGATCCACTGGAAAAGAAAATGATCAGGACTCCGTGTTTCGGTTGTAA

Coding sequence (CDS)

ATGTCCAAACGTGTGCGCACAAAGACAAATGGAGTGAGCACACTGGATATTTGGTCGTGGAAGTATTTGGTTCCATGGATGAGGGGAGACCTATTTGCTCGATCGGTGAGAATGTCTACTCCTGCGAGGAAAAGACTGATGAGAGACTTCAAGAGGTTGCAACAAGATCCACCTGCTGGCATTAGTGGTGCTCCCCAAAACAATAATATCATGCTATGGAATGCTGTTATATTTGGGGCAGATGATACACCTTGGGATGGAGGTACGTCTAAGCTGATCCTTCAGTTCACTGAGGATTATCCAAATAAGCCACCGACAGTTCGCTTTGTGTCTAGAATGTTCCACCCTAATACAGCTATACTCATCTCTATTCAGAAGAGGTTGGATGCTATGTTATATGCTGGTCTAACTGCGAAACATAAGGAGTCTGCAACGATATTTGCAAACGTGGTTGGTGCACAGGTGATTTCACAACTAAGAGATGCCAACTTGAGTATGGACACTTTAGCTGACAACCAATCAGTTGGAGTGGATGTTGTTTCTCATGGATCCACTGGAAAAGAAAATGATCAGGACTCCGTGTTTCGGTTGTAA

Protein sequence

MSKRVRTKTNGVSTLDIWSWKYLVPWMRGDLFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPNTAILISIQKRLDAMLYAGLTAKHKESATIFANVVGAQVISQLRDANLSMDTLADNQSVGVDVVSHGSTGKENDQDSVFRL
Homology
[Close]
BLAST of Spg019261 vs. NCBI nr
Match: RYR17954.1 (hypothetical protein Ahy_B03g062607 [Arachis hypogaea])

HSP 1 Score: 174.5 bits (441), Expect = 9.2e-40
Identity = 85/105 (80.95%), Postives = 91/105 (86.67%), Query Frame = 0 

Query: 13  STLDIWSWKYLVPWMRGDLFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIML 72
           S LD+  W++L   +R D+    VRMSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIML
Sbjct: 22  SMLDM--WQHLNQHVR-DVLKHVVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIML 81

Query: 73  WNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN 118
           WNAVIFG DDTPWDGGT KL LQFTEDYPNKPPTVRFVSRMFHPN
Sbjct: 82  WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 123

[Close]
BLAST of Spg019261 vs. NCBI nr
Match: KAF3966055.1 (hypothetical protein CMV_009812 [Castanea mollissima])

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-39
Identity = 79/87 (90.80%), Postives = 84/87 (96.55%), Query Frame = 0 

Query: 31  LFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTS 90
           +++R+VRMSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT 
Sbjct: 31  VYSRAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTF 90

Query: 91  KLILQFTEDYPNKPPTVRFVSRMFHPN 118
           KL LQFTEDYPNKPPTVRFVSRMFHPN
Sbjct: 91  KLTLQFTEDYPNKPPTVRFVSRMFHPN 117

[Close]
BLAST of Spg019261 vs. NCBI nr
Match: KAF4391873.1 (hypothetical protein G4B88_011516 [Cannabis sativa])

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-39
Identity = 84/94 (89.36%), Postives = 86/94 (91.49%), Query Frame = 0 

Query: 35  SVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLIL 94
           +VRMSTPARKRLMRDFKRLQ DPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL L
Sbjct: 109 AVRMSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 168

Query: 95  QFTEDYPNKPPTVRFVSRMFHPNTAILISIQKRL 129
           QFTEDYPNKPPTVRFVSRMFHPNT IL SIQ  L
Sbjct: 169 QFTEDYPNKPPTVRFVSRMFHPNT-ILTSIQSLL 201

[Close]
BLAST of Spg019261 vs. NCBI nr
Match: KAF4360876.1 (hypothetical protein F8388_020029 [Cannabis sativa])

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-39
Identity = 84/94 (89.36%), Postives = 86/94 (91.49%), Query Frame = 0 

Query: 35  SVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLIL 94
           +VRMSTPARKRLMRDFKRLQ DPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL L
Sbjct: 109 AVRMSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 168

Query: 95  QFTEDYPNKPPTVRFVSRMFHPNTAILISIQKRL 129
           QFTEDYPNKPPTVRFVSRMFHPNT IL SIQ  L
Sbjct: 169 QFTEDYPNKPPTVRFVSRMFHPNT-ILTSIQSLL 201

[Close]
BLAST of Spg019261 vs. NCBI nr
Match: KAG9459226.1 (hypothetical protein H6P81_003734 [Aristolochia fimbriata])

HSP 1 Score: 172.2 bits (435), Expect = 4.5e-39
Identity = 79/86 (91.86%), Postives = 81/86 (94.19%), Query Frame = 0 

Query: 32  FARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSK 91
           F R VRMSTP+RKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT K
Sbjct: 22  FYREVRMSTPSRKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFK 81

Query: 92  LILQFTEDYPNKPPTVRFVSRMFHPN 118
           L LQFTEDYPNKPPTVRFVSRMFHPN
Sbjct: 82  LTLQFTEDYPNKPPTVRFVSRMFHPN 107

[Close]
BLAST of Spg019261 vs. ExPASy Swiss-Prot
Match: P25865 (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.6e-39
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 38  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFT 97
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 98  EDYPNKPPTVRFVSRMFHPN 118
           EDYPNKPPTVRFVSRMFHPN
Sbjct: 61  EDYPNKPPTVRFVSRMFHPN 80

[Close]
BLAST of Spg019261 vs. ExPASy Swiss-Prot
Match: P42745 (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.6e-39
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 38  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFT 97
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 98  EDYPNKPPTVRFVSRMFHPN 118
           EDYPNKPPTVRFVSRMFHPN
Sbjct: 61  EDYPNKPPTVRFVSRMFHPN 80

[Close]
BLAST of Spg019261 vs. ExPASy Swiss-Prot
Match: P35130 (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa OX=3879 GN=UBC2 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.2e-39
Identity = 74/80 (92.50%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 38  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFT 97
           MSTPARKRLMRDFKRLQ DPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 98  EDYPNKPPTVRFVSRMFHPN 118
           EDYPNKPPTVRFVSRMFHPN
Sbjct: 61  EDYPNKPPTVRFVSRMFHPN 80

[Close]
BLAST of Spg019261 vs. ExPASy Swiss-Prot
Match: P25866 (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.1e-39
Identity = 74/80 (92.50%), Postives = 75/80 (93.75%), Query Frame = 0 

Query: 38  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFT 97
           MSTPARKRLMRDFKRLQQDPPAGISGAP +NNI LWNAVIFG DDTPWDGGT KL LQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 98  EDYPNKPPTVRFVSRMFHPN 118
           EDYPNKPPTVRFVSRMFHPN
Sbjct: 61  EDYPNKPPTVRFVSRMFHPN 80

[Close]
BLAST of Spg019261 vs. ExPASy Swiss-Prot
Match: P42746 (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana OX=3702 GN=UBC3 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-34
Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 0 

Query: 38  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFT 97
           M+TPA+KRLM DFKRLQ+DPP GISGAPQ+NNIM WNA+IFG +DTPWDGGT KL L FT
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 98  EDYPNKPPTVRFVSRMFHPN 118
           EDYPNKPP VRFVSRMFHPN
Sbjct: 61  EDYPNKPPIVRFVSRMFHPN 80

[Close]
BLAST of Spg019261 vs. ExPASy TrEMBL
Match: A0A444ZV67 (UBC core domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g062607 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 4.4e-40
Identity = 85/105 (80.95%), Postives = 91/105 (86.67%), Query Frame = 0 

Query: 13  STLDIWSWKYLVPWMRGDLFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIML 72
           S LD+  W++L   +R D+    VRMSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIML
Sbjct: 22  SMLDM--WQHLNQHVR-DVLKHVVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIML 81

Query: 73  WNAVIFGADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHPN 118
           WNAVIFG DDTPWDGGT KL LQFTEDYPNKPPTVRFVSRMFHPN
Sbjct: 82  WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 123

[Close]
BLAST of Spg019261 vs. ExPASy TrEMBL
Match: A0A7J6H9A8 (UBC core domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_011516 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 7.6e-40
Identity = 84/94 (89.36%), Postives = 86/94 (91.49%), Query Frame = 0 

Query: 35  SVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLIL 94
           +VRMSTPARKRLMRDFKRLQ DPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL L
Sbjct: 109 AVRMSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 168

Query: 95  QFTEDYPNKPPTVRFVSRMFHPNTAILISIQKRL 129
           QFTEDYPNKPPTVRFVSRMFHPNT IL SIQ  L
Sbjct: 169 QFTEDYPNKPPTVRFVSRMFHPNT-ILTSIQSLL 201

[Close]
BLAST of Spg019261 vs. ExPASy TrEMBL
Match: A0A7J6ERE1 (UBC core domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_020029 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 7.6e-40
Identity = 84/94 (89.36%), Postives = 86/94 (91.49%), Query Frame = 0 

Query: 35  SVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLIL 94
           +VRMSTPARKRLMRDFKRLQ DPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL L
Sbjct: 109 AVRMSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 168

Query: 95  QFTEDYPNKPPTVRFVSRMFHPNTAILISIQKRL 129
           QFTEDYPNKPPTVRFVSRMFHPNT IL SIQ  L
Sbjct: 169 QFTEDYPNKPPTVRFVSRMFHPNT-ILTSIQSLL 201

[Close]
BLAST of Spg019261 vs. ExPASy TrEMBL
Match: A0A0A0KVV8 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604360 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 2.2e-39
Identity = 79/84 (94.05%), Postives = 81/84 (96.43%), Query Frame = 0 

Query: 36  VRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQ 95
           VRMSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQ
Sbjct: 18  VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 77

Query: 96  FTEDYPNKPPTVRFVSRMFHPNTA 120
           FTEDYPNKPPTVRFVSRMFHPNT+
Sbjct: 78  FTEDYPNKPPTVRFVSRMFHPNTS 101

[Close]
BLAST of Spg019261 vs. ExPASy TrEMBL
Match: A0A1D1ZJA7 (Ubiquitin-conjugating enzyme E2 2 OS=Anthurium amnicola OX=1678845 GN=UBC2_3 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 2.2e-39
Identity = 80/87 (91.95%), Postives = 81/87 (93.10%), Query Frame = 0 

Query: 31  LFARSVRMSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTS 90
           L  R VRMSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT 
Sbjct: 85  LEVRGVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTF 144

Query: 91  KLILQFTEDYPNKPPTVRFVSRMFHPN 118
           KL LQFTEDYPNKPPTVRFVSRMFHPN
Sbjct: 145 KLTLQFTEDYPNKPPTVRFVSRMFHPN 171

[Close]
BLAST of Spg019261 vs. TAIR 10
Match: AT1G14400.1 (ubiquitin carrier protein 1 )

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-40
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 38  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFT 97
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 98  EDYPNKPPTVRFVSRMFHPN 118
           EDYPNKPPTVRFVSRMFHPN
Sbjct: 61  EDYPNKPPTVRFVSRMFHPN 80

[Close]
BLAST of Spg019261 vs. TAIR 10
Match: AT1G14400.2 (ubiquitin carrier protein 1 )

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-40
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 38  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFT 97
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 98  EDYPNKPPTVRFVSRMFHPN 118
           EDYPNKPPTVRFVSRMFHPN
Sbjct: 61  EDYPNKPPTVRFVSRMFHPN 80

[Close]
BLAST of Spg019261 vs. TAIR 10
Match: AT2G02760.1 (ubiquiting-conjugating enzyme 2 )

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-40
Identity = 75/80 (93.75%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 38  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFT 97
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFG DDTPWDGGT KL LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 98  EDYPNKPPTVRFVSRMFHPN 118
           EDYPNKPPTVRFVSRMFHPN
Sbjct: 61  EDYPNKPPTVRFVSRMFHPN 80

[Close]
BLAST of Spg019261 vs. TAIR 10
Match: AT5G62540.1 (ubiquitin-conjugating enzyme 3 )

HSP 1 Score: 147.9 bits (372), Expect = 8.6e-36
Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 0 

Query: 38  MSTPARKRLMRDFKRLQQDPPAGISGAPQNNNIMLWNAVIFGADDTPWDGGTSKLILQFT 97
           M+TPA+KRLM DFKRLQ+DPP GISGAPQ+NNIM WNA+IFG +DTPWDGGT KL L FT
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 98  EDYPNKPPTVRFVSRMFHPN 118
           EDYPNKPP VRFVSRMFHPN
Sbjct: 61  EDYPNKPPIVRFVSRMFHPN 80

[Close]
BLAST of Spg019261 vs. TAIR 10
Match: AT1G08030.1 (tyrosylprotein sulfotransferase )

HSP 1 Score: 98.2 bits (243), Expect = 7.8e-21
Identity = 71/195 (36.41%), Postives = 106/195 (54.36%), Query Frame = 0 

Query: 1   MSKRVRTKTNGVSTLDIWSWKYLVPWMRGDLFARSVRMSTPARKRLMRDFKRLQQDPPAG 60
           MS R+R K+N +STLDIW WKYLVPWMR DLFAR       ARK  +++   ++ D P  
Sbjct: 163 MSSRIR-KSNVISTLDIWPWKYLVPWMREDLFAR-----RDARK--LKEVVIIEDDNPYD 222

Query: 61  ISGAPQNNNIMLWNAVIFG--ADDTPWDGGTSKLILQFTEDYPNKPPTVRFVSRMFHP-N 120
           +        +M  +  +    A D   +G T ++       + ++   VR   + F    
Sbjct: 223 M-----EEMLMPLHKYLDAPTAHDIIHNGATFQIAGLTNNSHLSEAHEVRHCVQKFKSLG 282

Query: 121 TAILISIQKRLDAMLYAGLTAKHKESATIFANVVGAQVISQLRDANLSMDTLADNQSVGV 180
            ++L   ++RLD+MLY GLT +H+ESA++FANVVG+QV+SQ+  +N +    A      V
Sbjct: 283 ESVLQVAKRRLDSMLYVGLTEEHRESASLFANVVGSQVLSQVVPSNATAKIKALKSEASV 342

Query: 181 DVVSHGSTGKENDQD 193
            +   GS  K N Q+
Sbjct: 343 TISETGS-DKSNIQN 343

The following BLAST results are available for this feature:
BLAST of Spg019261 vs. NCBI nr
Match NameE-valueIdentityDescription
RYR17954.19.2e-4080.95hypothetical protein Ahy_B03g062607 [Arachis hypogaea][more]
KAF3966055.11.2e-3990.80hypothetical protein CMV_009812 [Castanea mollissima][more]
KAF4391873.11.6e-3989.36hypothetical protein G4B88_011516 [Cannabis sativa][more]
KAF4360876.11.6e-3989.36hypothetical protein F8388_020029 [Cannabis sativa][more]
KAG9459226.14.5e-3991.86hypothetical protein H6P81_003734 [Aristolochia fimbriata][more]
BLAST of Spg019261 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P258651.6e-3993.75Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 S... [more]
P427451.6e-3993.75Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 S... [more]
P351306.2e-3992.50Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa OX=3879 GN=UBC2 PE=2 SV=1[more]
P258668.1e-3992.50Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1[more]
P427461.2e-3482.50Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana OX=3702 GN=UBC3 PE=2 S... [more]
BLAST of Spg019261 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A444ZV674.4e-4080.95UBC core domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g062607... [more]
A0A7J6H9A87.6e-4089.36UBC core domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_011516 PE... [more]
A0A7J6ERE17.6e-4089.36UBC core domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_020029 PE... [more]
A0A0A0KVV82.2e-3994.05UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604360 PE... [more]
A0A1D1ZJA72.2e-3991.95Ubiquitin-conjugating enzyme E2 2 OS=Anthurium amnicola OX=1678845 GN=UBC2_3 PE=... [more]
BLAST of Spg019261 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G14400.11.2e-4093.75ubiquitin carrier protein 1 [more]
AT1G14400.21.2e-4093.75ubiquitin carrier protein 1 [more]
AT2G02760.11.2e-4093.75ubiquiting-conjugating enzyme 2 [more]
AT5G62540.18.6e-3682.50ubiquitin-conjugating enzyme 3 [more]
AT1G08030.17.8e-2136.41tyrosylprotein sulfotransferase [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 44..188
e-value: 9.6E-10
score: 48.4
NoneNo IPR availablePANTHERPTHR24067:SF304UBIQUTIN-CONJUGATING ENZYME 4coord: 32..152
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 32..152
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 45..117
e-value: 2.4E-20
score: 72.6
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 41..197
score: 26.670036
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 44..124
e-value: 1.93554E-33
score: 114.607
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 28..127
e-value: 1.2E-30
score: 108.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 34..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg019261.1Spg019261.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0016574 histone ubiquitination
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0000209 protein polyubiquitination
molecular_function GO:0005524 ATP binding
molecular_function GO:0061631 ubiquitin conjugating enzyme activity