Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAACGACCCATGAAAGCACTATTTCAGTAGAGAGAGTTATGCTCCTCTACAGTATTATGAAGGGTTTAGAGATCAATATTGGGAGCATTATCAGGGAAGAAATCCTTGCCTGTGGAAGAAAGAAAGCAGGTAAGCTTTTCTTCGGGTCGCTTATCACCCAGCTATGTCAGAGGGTGAAGATAGTTCTTGGTAAGGATGAGGAGCGTCACTTCTTCAGGCCTACCATTGACCGGTCCTTGATCGGGAACCTTCAACAAAATAACATCTAAAGGAAAGACAAAGCTTCCACATCTCAAGCCACTAATCCGACTTCTCCACCTCAGCACACTCCTTTTTCAGGGCCTCATCGTCATTTGAAGCCCTAGTTATTGACTACCAACAACTGGATCAACTCAGGGACAACCTGAGGACTTATTGGGCATATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTTTACCTCTCTATCGCCCCGAGTATTGCTCCTGTCTTTCCTGATTTCCCCCAATTACTGCTGCCTCATGAAGATAAGGATTCTGATGATGAAGAAGAAGATAATGAAGATGAAGATGAAGAGAAAGAGATTTCCTCAGACGAGGACTAG
mRNA sequence
ATGCCAACGACCCATGAAAGCACTATTTCAGTAGAGAGAGTTATGCTCCTCTACAGTATTATGAAGGGTTTAGAGATCAATATTGGGAGCATTATCAGGGAAGAAATCCTTGCCTGTGGAAGAAAGAAAGCAGGTAAGCTTTTCTTCGGGTCGCTTATCACCCAGCTATGTCAGAGGGTGAAGATAGTTCTTGGTAAGGATGAGGAGCGTCACTTCTTCAGGCCTACCATTGACCGGGCCTCATCGTCATTTGAAGCCCTAGTTATTGACTACCAACAACTGGATCAACTCAGGGACAACCTGAGGACTTATTGGGCATATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTTTACCTCTCTATCGCCCCGAGTATTGCTCCTGTCTTTCCTGATTTCCCCCAATTACTGCTGCCTCATGAAGATAAGGATTCTGATGATGAAGAAGAAGATAATGAAGATGAAGATGAAGAGAAAGAGATTTCCTCAGACGAGGACTAG
Coding sequence (CDS)
ATGCCAACGACCCATGAAAGCACTATTTCAGTAGAGAGAGTTATGCTCCTCTACAGTATTATGAAGGGTTTAGAGATCAATATTGGGAGCATTATCAGGGAAGAAATCCTTGCCTGTGGAAGAAAGAAAGCAGGTAAGCTTTTCTTCGGGTCGCTTATCACCCAGCTATGTCAGAGGGTGAAGATAGTTCTTGGTAAGGATGAGGAGCGTCACTTCTTCAGGCCTACCATTGACCGGGCCTCATCGTCATTTGAAGCCCTAGTTATTGACTACCAACAACTGGATCAACTCAGGGACAACCTGAGGACTTATTGGGCATATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTTTACCTCTCTATCGCCCCGAGTATTGCTCCTGTCTTTCCTGATTTCCCCCAATTACTGCTGCCTCATGAAGATAAGGATTCTGATGATGAAGAAGAAGATAATGAAGATGAAGATGAAGAGAAAGAGATTTCCTCAGACGAGGACTAG
Protein sequence
MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVKIVLGKDEERHFFRPTIDRASSSFEALVIDYQQLDQLRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQLLLPHEDKDSDDEEEDNEDEDEEKEISSDED
Homology
BLAST of Spg018705 vs. NCBI nr
Match:
PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])
HSP 1 Score: 82.4 bits (202), Expect = 4.0e-12
Identity = 66/203 (32.51%), Postives = 93/203 (45.81%), Query Frame = 0
Query: 1 MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
+PTTH T+S +R++LLYS++ G IN+G +I EI AC +K+G LFF SLITQLC+
Sbjct: 57 LPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLITQLCRNA 116
Query: 61 KIVLGKDEERHFFRPTID------------------------RASSSFEALVIDYQQLDQ 120
+ +EE+ ID +SS A QQL
Sbjct: 117 RAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANGDILQQLKA 176
Query: 121 LRDNL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQ 159
L L + +WAY+KERD A+++ + P FP FPQ
Sbjct: 177 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPTFPQ 236
BLAST of Spg018705 vs. NCBI nr
Match:
KAF4375842.1 (hypothetical protein G4B88_026421 [Cannabis sativa])
HSP 1 Score: 78.2 bits (191), Expect = 7.5e-11
Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = 0
Query: 1 MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
+PT+H+ST+S ER+ +LY I+KG +IN+G +I +EI C + GKLFF LIT+ C+
Sbjct: 886 LPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFECAHRVKGKLFFSCLITEKCRCA 945
Query: 61 KIVLGKDEE-------------------------RHFFRPTIDRASSSFEALVIDYQQLD 113
+ + DE+ R +D S EAL QQ
Sbjct: 946 NVPMLNDEDPVPRKGVVSFEPDRAPKRTTPSTTTASTSRDPMDERLSKHEAL----QQ-- 1005
BLAST of Spg018705 vs. NCBI nr
Match:
PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])
HSP 1 Score: 77.0 bits (188), Expect = 1.7e-10
Identity = 59/190 (31.05%), Postives = 93/190 (48.95%), Query Frame = 0
Query: 1 MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
+PTTH +S +R++LL+S++ G IN+G +I EI AC +K G LFF SLIT+LC+
Sbjct: 116 LPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNA 175
Query: 61 KIVLGKDE--------------------ERHFFRPTIDR---ASSS---------FEALV 120
++ +++ +P+ R ASSS +AL
Sbjct: 176 PFLVNEEKLHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALE 235
Query: 121 IDYQQLDQLRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQLLLPHEDKDSDDE 159
Q + + +WAY+KERD A+++ + P FP FPQ +L +D D + E
Sbjct: 236 QRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEIL--QDLDYEYE 295
BLAST of Spg018705 vs. NCBI nr
Match:
PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])
HSP 1 Score: 76.3 bits (186), Expect = 2.9e-10
Identity = 66/205 (32.20%), Postives = 92/205 (44.88%), Query Frame = 0
Query: 1 MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
+PTTH T+S +R++LL+S++ G IN+G +I EI AC +K G LFF SLIT+LC+
Sbjct: 186 LPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNA 245
Query: 61 KIVLGKDEERHFFRPTID-----------------RASSSFEALVID-------YQQLDQ 120
+ +EE+ ID + SSS A QQL
Sbjct: 246 RAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKA 305
Query: 121 LRDNL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQ 161
L L + +WAY+KERD A+++ + P FP FPQ
Sbjct: 306 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQ 365
BLAST of Spg018705 vs. NCBI nr
Match:
MCI09484.1 (hypothetical protein [Trifolium medium])
HSP 1 Score: 74.3 bits (181), Expect = 1.1e-09
Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 0
Query: 1 MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKA--GKLFFGSLITQLCQ 60
MPTTH T++ R++LL+ I+ G +IN+G II +EI+ C KK+ G L+F LIT+LC+
Sbjct: 40 MPTTHNETVNKARLVLLHCIIAGQKINVGRIIHQEIVNCSAKKSNEGMLYFPCLITELCK 99
Query: 61 RVKI-VLGKDEERHFFRPTIDRASSSFEALV-------------------------IDYQ 108
+ + V G+DE F+PT + E L+ +D +
Sbjct: 100 KNLVHVSGRDE---VFQPTNSFDQKAIETLLKGNTGRKPRQQLPEATTSAAAVSQAVDAE 159
BLAST of Spg018705 vs. ExPASy TrEMBL
Match:
A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)
HSP 1 Score: 82.4 bits (202), Expect = 1.9e-12
Identity = 66/203 (32.51%), Postives = 93/203 (45.81%), Query Frame = 0
Query: 1 MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
+PTTH T+S +R++LLYS++ G IN+G +I EI AC +K+G LFF SLITQLC+
Sbjct: 57 LPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLITQLCRNA 116
Query: 61 KIVLGKDEERHFFRPTID------------------------RASSSFEALVIDYQQLDQ 120
+ +EE+ ID +SS A QQL
Sbjct: 117 RAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANGDILQQLKA 176
Query: 121 LRDNL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQ 159
L L + +WAY+KERD A+++ + P FP FPQ
Sbjct: 177 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPTFPQ 236
BLAST of Spg018705 vs. ExPASy TrEMBL
Match:
A0A7J6FZ22 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 3.6e-11
Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = 0
Query: 1 MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
+PT+H+ST+S ER+ +LY I+KG +IN+G +I +EI C + GKLFF LIT+ C+
Sbjct: 886 LPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFECAHRVKGKLFFSCLITEKCRCA 945
Query: 61 KIVLGKDEE-------------------------RHFFRPTIDRASSSFEALVIDYQQLD 113
+ + DE+ R +D S EAL QQ
Sbjct: 946 NVPMLNDEDPVPRKGVVSFEPDRAPKRTTPSTTTASTSRDPMDERLSKHEAL----QQ-- 1005
BLAST of Spg018705 vs. ExPASy TrEMBL
Match:
A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 8.1e-11
Identity = 59/190 (31.05%), Postives = 93/190 (48.95%), Query Frame = 0
Query: 1 MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
+PTTH +S +R++LL+S++ G IN+G +I EI AC +K G LFF SLIT+LC+
Sbjct: 116 LPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNA 175
Query: 61 KIVLGKDE--------------------ERHFFRPTIDR---ASSS---------FEALV 120
++ +++ +P+ R ASSS +AL
Sbjct: 176 PFLVNEEKLHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALE 235
Query: 121 IDYQQLDQLRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQLLLPHEDKDSDDE 159
Q + + +WAY+KERD A+++ + P FP FPQ +L +D D + E
Sbjct: 236 QRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEIL--QDLDYEYE 295
BLAST of Spg018705 vs. ExPASy TrEMBL
Match:
A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 1.4e-10
Identity = 66/205 (32.20%), Postives = 92/205 (44.88%), Query Frame = 0
Query: 1 MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
+PTTH T+S +R++LL+S++ G IN+G +I EI AC +K G LFF SLIT+LC+
Sbjct: 186 LPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNA 245
Query: 61 KIVLGKDEERHFFRPTID-----------------RASSSFEALVID-------YQQLDQ 120
+ +EE+ ID + SSS A QQL
Sbjct: 246 RAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKA 305
Query: 121 LRDNL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQ 161
L L + +WAY+KERD A+++ + P FP FPQ
Sbjct: 306 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQ 365
BLAST of Spg018705 vs. ExPASy TrEMBL
Match:
A0A392PCH7 (Uncharacterized protein OS=Trifolium medium OX=97028 PE=4 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 5.3e-10
Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 0
Query: 1 MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKA--GKLFFGSLITQLCQ 60
MPTTH T++ R++LL+ I+ G +IN+G II +EI+ C KK+ G L+F LIT+LC+
Sbjct: 40 MPTTHNETVNKARLVLLHCIIAGQKINVGRIIHQEIVNCSAKKSNEGMLYFPCLITELCK 99
Query: 61 RVKI-VLGKDEERHFFRPTIDRASSSFEALV-------------------------IDYQ 108
+ + V G+DE F+PT + E L+ +D +
Sbjct: 100 KNLVHVSGRDE---VFQPTNSFDQKAIETLLKGNTGRKPRQQLPEATTSAAAVSQAVDAE 159
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PON59596.1 | 4.0e-12 | 32.51 | hypothetical protein PanWU01x14_158080 [Parasponia andersonii] | [more] |
KAF4375842.1 | 7.5e-11 | 34.31 | hypothetical protein G4B88_026421 [Cannabis sativa] | [more] |
PON78020.1 | 1.7e-10 | 31.05 | hypothetical protein PanWU01x14_023740 [Parasponia andersonii] | [more] |
PON46472.1 | 2.9e-10 | 32.20 | hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii] | [more] |
MCI09484.1 | 1.1e-09 | 33.33 | hypothetical protein [Trifolium medium] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2P5CEY2 | 1.9e-12 | 32.51 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE... | [more] |
A0A7J6FZ22 | 3.6e-11 | 34.31 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1 | [more] |
A0A2P5DXM3 | 8.1e-11 | 31.05 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... | [more] |
A0A2P5BCG4 | 1.4e-10 | 32.20 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A392PCH7 | 5.3e-10 | 33.33 | Uncharacterized protein OS=Trifolium medium OX=97028 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |