Spg018705 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg018705
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold3: 7166371 .. 7166978 (+)
RNA-Seq ExpressionSpg018705
SyntenySpg018705
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAACGACCCATGAAAGCACTATTTCAGTAGAGAGAGTTATGCTCCTCTACAGTATTATGAAGGGTTTAGAGATCAATATTGGGAGCATTATCAGGGAAGAAATCCTTGCCTGTGGAAGAAAGAAAGCAGGTAAGCTTTTCTTCGGGTCGCTTATCACCCAGCTATGTCAGAGGGTGAAGATAGTTCTTGGTAAGGATGAGGAGCGTCACTTCTTCAGGCCTACCATTGACCGGTCCTTGATCGGGAACCTTCAACAAAATAACATCTAAAGGAAAGACAAAGCTTCCACATCTCAAGCCACTAATCCGACTTCTCCACCTCAGCACACTCCTTTTTCAGGGCCTCATCGTCATTTGAAGCCCTAGTTATTGACTACCAACAACTGGATCAACTCAGGGACAACCTGAGGACTTATTGGGCATATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTTTACCTCTCTATCGCCCCGAGTATTGCTCCTGTCTTTCCTGATTTCCCCCAATTACTGCTGCCTCATGAAGATAAGGATTCTGATGATGAAGAAGAAGATAATGAAGATGAAGATGAAGAGAAAGAGATTTCCTCAGACGAGGACTAG

mRNA sequence

ATGCCAACGACCCATGAAAGCACTATTTCAGTAGAGAGAGTTATGCTCCTCTACAGTATTATGAAGGGTTTAGAGATCAATATTGGGAGCATTATCAGGGAAGAAATCCTTGCCTGTGGAAGAAAGAAAGCAGGTAAGCTTTTCTTCGGGTCGCTTATCACCCAGCTATGTCAGAGGGTGAAGATAGTTCTTGGTAAGGATGAGGAGCGTCACTTCTTCAGGCCTACCATTGACCGGGCCTCATCGTCATTTGAAGCCCTAGTTATTGACTACCAACAACTGGATCAACTCAGGGACAACCTGAGGACTTATTGGGCATATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTTTACCTCTCTATCGCCCCGAGTATTGCTCCTGTCTTTCCTGATTTCCCCCAATTACTGCTGCCTCATGAAGATAAGGATTCTGATGATGAAGAAGAAGATAATGAAGATGAAGATGAAGAGAAAGAGATTTCCTCAGACGAGGACTAG

Coding sequence (CDS)

ATGCCAACGACCCATGAAAGCACTATTTCAGTAGAGAGAGTTATGCTCCTCTACAGTATTATGAAGGGTTTAGAGATCAATATTGGGAGCATTATCAGGGAAGAAATCCTTGCCTGTGGAAGAAAGAAAGCAGGTAAGCTTTTCTTCGGGTCGCTTATCACCCAGCTATGTCAGAGGGTGAAGATAGTTCTTGGTAAGGATGAGGAGCGTCACTTCTTCAGGCCTACCATTGACCGGGCCTCATCGTCATTTGAAGCCCTAGTTATTGACTACCAACAACTGGATCAACTCAGGGACAACCTGAGGACTTATTGGGCATATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTTTACCTCTCTATCGCCCCGAGTATTGCTCCTGTCTTTCCTGATTTCCCCCAATTACTGCTGCCTCATGAAGATAAGGATTCTGATGATGAAGAAGAAGATAATGAAGATGAAGATGAAGAGAAAGAGATTTCCTCAGACGAGGACTAG

Protein sequence

MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVKIVLGKDEERHFFRPTIDRASSSFEALVIDYQQLDQLRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQLLLPHEDKDSDDEEEDNEDEDEEKEISSDED
Homology
BLAST of Spg018705 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 82.4 bits (202), Expect = 4.0e-12
Identity = 66/203 (32.51%), Postives = 93/203 (45.81%), Query Frame = 0

Query: 1   MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
           +PTTH  T+S +R++LLYS++ G  IN+G +I  EI AC  +K+G LFF SLITQLC+  
Sbjct: 57  LPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLITQLCRNA 116

Query: 61  KIVLGKDEERHFFRPTID------------------------RASSSFEALVIDYQQLDQ 120
           +     +EE+      ID                          +SS  A     QQL  
Sbjct: 117 RAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANGDILQQLKA 176

Query: 121 LRDNL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQ 159
           L   L                     + +WAY+KERD A+++   +      P FP FPQ
Sbjct: 177 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPTFPQ 236

BLAST of Spg018705 vs. NCBI nr
Match: KAF4375842.1 (hypothetical protein G4B88_026421 [Cannabis sativa])

HSP 1 Score: 78.2 bits (191), Expect = 7.5e-11
Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = 0

Query: 1    MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
            +PT+H+ST+S ER+ +LY I+KG +IN+G +I +EI  C  +  GKLFF  LIT+ C+  
Sbjct: 886  LPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFECAHRVKGKLFFSCLITEKCRCA 945

Query: 61   KIVLGKDEE-------------------------RHFFRPTIDRASSSFEALVIDYQQLD 113
             + +  DE+                             R  +D   S  EAL    QQ  
Sbjct: 946  NVPMLNDEDPVPRKGVVSFEPDRAPKRTTPSTTTASTSRDPMDERLSKHEAL----QQ-- 1005

BLAST of Spg018705 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-10
Identity = 59/190 (31.05%), Postives = 93/190 (48.95%), Query Frame = 0

Query: 1   MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
           +PTTH   +S +R++LL+S++ G  IN+G +I  EI AC  +K G LFF SLIT+LC+  
Sbjct: 116 LPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNA 175

Query: 61  KIVLGKDE--------------------ERHFFRPTIDR---ASSS---------FEALV 120
             ++ +++                         +P+  R   ASSS          +AL 
Sbjct: 176 PFLVNEEKLHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALE 235

Query: 121 IDYQQLDQLRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQLLLPHEDKDSDDE 159
               Q +      + +WAY+KERD A+++   +      P FP FPQ +L  +D D + E
Sbjct: 236 QRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEIL--QDLDYEYE 295

BLAST of Spg018705 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 76.3 bits (186), Expect = 2.9e-10
Identity = 66/205 (32.20%), Postives = 92/205 (44.88%), Query Frame = 0

Query: 1   MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
           +PTTH  T+S +R++LL+S++ G  IN+G +I  EI AC  +K G LFF SLIT+LC+  
Sbjct: 186 LPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNA 245

Query: 61  KIVLGKDEERHFFRPTID-----------------RASSSFEALVID-------YQQLDQ 120
           +     +EE+      ID                 + SSS  A            QQL  
Sbjct: 246 RAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKA 305

Query: 121 LRDNL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQ 161
           L   L                     + +WAY+KERD A+++   +      P FP FPQ
Sbjct: 306 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQ 365

BLAST of Spg018705 vs. NCBI nr
Match: MCI09484.1 (hypothetical protein [Trifolium medium])

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-09
Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 0

Query: 1   MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKA--GKLFFGSLITQLCQ 60
           MPTTH  T++  R++LL+ I+ G +IN+G II +EI+ C  KK+  G L+F  LIT+LC+
Sbjct: 40  MPTTHNETVNKARLVLLHCIIAGQKINVGRIIHQEIVNCSAKKSNEGMLYFPCLITELCK 99

Query: 61  RVKI-VLGKDEERHFFRPTIDRASSSFEALV-------------------------IDYQ 108
           +  + V G+DE    F+PT      + E L+                         +D +
Sbjct: 100 KNLVHVSGRDE---VFQPTNSFDQKAIETLLKGNTGRKPRQQLPEATTSAAAVSQAVDAE 159

BLAST of Spg018705 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.9e-12
Identity = 66/203 (32.51%), Postives = 93/203 (45.81%), Query Frame = 0

Query: 1   MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
           +PTTH  T+S +R++LLYS++ G  IN+G +I  EI AC  +K+G LFF SLITQLC+  
Sbjct: 57  LPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLITQLCRNA 116

Query: 61  KIVLGKDEERHFFRPTID------------------------RASSSFEALVIDYQQLDQ 120
           +     +EE+      ID                          +SS  A     QQL  
Sbjct: 117 RAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANGDILQQLKA 176

Query: 121 LRDNL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQ 159
           L   L                     + +WAY+KERD A+++   +      P FP FPQ
Sbjct: 177 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPTFPQ 236

BLAST of Spg018705 vs. ExPASy TrEMBL
Match: A0A7J6FZ22 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.6e-11
Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = 0

Query: 1    MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
            +PT+H+ST+S ER+ +LY I+KG +IN+G +I +EI  C  +  GKLFF  LIT+ C+  
Sbjct: 886  LPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFECAHRVKGKLFFSCLITEKCRCA 945

Query: 61   KIVLGKDEE-------------------------RHFFRPTIDRASSSFEALVIDYQQLD 113
             + +  DE+                             R  +D   S  EAL    QQ  
Sbjct: 946  NVPMLNDEDPVPRKGVVSFEPDRAPKRTTPSTTTASTSRDPMDERLSKHEAL----QQ-- 1005

BLAST of Spg018705 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.1e-11
Identity = 59/190 (31.05%), Postives = 93/190 (48.95%), Query Frame = 0

Query: 1   MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
           +PTTH   +S +R++LL+S++ G  IN+G +I  EI AC  +K G LFF SLIT+LC+  
Sbjct: 116 LPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNA 175

Query: 61  KIVLGKDE--------------------ERHFFRPTIDR---ASSS---------FEALV 120
             ++ +++                         +P+  R   ASSS          +AL 
Sbjct: 176 PFLVNEEKLHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALE 235

Query: 121 IDYQQLDQLRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQLLLPHEDKDSDDE 159
               Q +      + +WAY+KERD A+++   +      P FP FPQ +L  +D D + E
Sbjct: 236 QRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEIL--QDLDYEYE 295

BLAST of Spg018705 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-10
Identity = 66/205 (32.20%), Postives = 92/205 (44.88%), Query Frame = 0

Query: 1   MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRV 60
           +PTTH  T+S +R++LL+S++ G  IN+G +I  EI AC  +K G LFF SLIT+LC+  
Sbjct: 186 LPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNA 245

Query: 61  KIVLGKDEERHFFRPTID-----------------RASSSFEALVID-------YQQLDQ 120
           +     +EE+      ID                 + SSS  A            QQL  
Sbjct: 246 RAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKA 305

Query: 121 LRDNL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQ 161
           L   L                     + +WAY+KERD A+++   +      P FP FPQ
Sbjct: 306 LEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQ 365

BLAST of Spg018705 vs. ExPASy TrEMBL
Match: A0A392PCH7 (Uncharacterized protein OS=Trifolium medium OX=97028 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 5.3e-10
Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 0

Query: 1   MPTTHESTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKA--GKLFFGSLITQLCQ 60
           MPTTH  T++  R++LL+ I+ G +IN+G II +EI+ C  KK+  G L+F  LIT+LC+
Sbjct: 40  MPTTHNETVNKARLVLLHCIIAGQKINVGRIIHQEIVNCSAKKSNEGMLYFPCLITELCK 99

Query: 61  RVKI-VLGKDEERHFFRPTIDRASSSFEALV-------------------------IDYQ 108
           +  + V G+DE    F+PT      + E L+                         +D +
Sbjct: 100 KNLVHVSGRDE---VFQPTNSFDQKAIETLLKGNTGRKPRQQLPEATTSAAAVSQAVDAE 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON59596.14.0e-1232.51hypothetical protein PanWU01x14_158080 [Parasponia andersonii][more]
KAF4375842.17.5e-1134.31hypothetical protein G4B88_026421 [Cannabis sativa][more]
PON78020.11.7e-1031.05hypothetical protein PanWU01x14_023740 [Parasponia andersonii][more]
PON46472.12.9e-1032.20hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
MCI09484.11.1e-0933.33hypothetical protein [Trifolium medium][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5CEY21.9e-1232.51Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE... [more]
A0A7J6FZ223.6e-1134.31Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1[more]
A0A2P5DXM38.1e-1131.05Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... [more]
A0A2P5BCG41.4e-1032.20Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A392PCH75.3e-1033.33Uncharacterized protein OS=Trifolium medium OX=97028 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..166

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg018705.1Spg018705.1mRNA