Spg018333 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg018333
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionbiogenesis of lysosome-related organelles complex 1 subunit 2
Locationscaffold3: 12023096 .. 12025886 (-)
RNA-Seq ExpressionSpg018333
SyntenySpg018333
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCGCAGTTATCTCTAACCCGTCGCTCGAGATCCAGTCGTAGTTGTGTGTGCCATAAGGCGACGAACATTGATCACAATTCCAGGGGAAAAGTTGAGGGGCCTGAGGTGCCGTATTCGCAAAAGTTGCCGTTGTGATCATCATGGCCGGAAAAGAGCAACGCTTGCCGAATAGAGACGAGCTCGCTGAATCCCTCAACGAATTCTTCACCAGCGTATCCGAAATGGTCAAATCGGACCTTCTTGTAATCTTCCAAACCCCTAATTCTCTCAGTTTCATCTTGCTATTTCGCTATATCTTTCGATTGGGTCTCTCTGTATGATTTGATTCTGCTCTCTGGTCGATGCTGGTTGTTCAATGTGTTGAGTTATTCTAAGAGAGAAGTGGCTCCGGCTATGAATTGGTTCTTATAATTAGTTTTTGAGCGTTTTCATTGAATATTATGAAGGTTTTGAAGATTTATCGCCCATGTTTTCTGGTTCTGAAGTGCGTTGTGACTATTGTGGGGTTTGGAGTTCACAGTAGTTGAAAGCTTGATTGTGATTGGCAAAACCATCAAACCATATCCCATGCTATCTATCTGGCCTTGAATGACCAATTTTGGTCTTTCGCAATCTTCTTCTTCTTTGTAATTCCCATGAAACGTTTACTTTTCATGTAGTACTATTGTCATCAAAACCTGAAAATCTGGAAATATGTTTCTAATGTTTTATCGATTTCTTGTTAGCTTTAACAATGATAAATATCGAGGTCTGCTTTAGTCAATGAATCTAAGAGGTGGGAATCAGCCTTCAAAGCCTTGTGTTTGGAGTGTTTCCCGGAAAAATGATGGTGGATTTGTTATTTTTCTCATATAGGGATCAAGTAATCAGCTGGCACTTTTAGAGAAAATGAATCTCAGGGTGGCCGAAGAGTACAAAGGTTTTGGCGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAATTGAAGTCAAAGAGTGGTGGCTTTGATGAGTACATAAACCAGATTGAGAAAATAGAGCATCAGGTGACTGAATTTGAAGCTGTAATTTCAATGCTTGACAAGCATGTTTCCATGCTGGAGTCAAAAGTGTTGTCCGTTTGTCAAAACAAACCTTCATGAATAAATTTCTTTTTTCGTGTTCAAAATTCAGAACCGTTCCTTTCAGAATATTTTTGCTTCTATATTGCTCATATTGTCGAATCTTTTACGATATCTCATTTGTTGGCAGTTGATGGTCCTAAATCTGTAGTGTTTTCTGAATGACTGATGCTAATTATATACCACAGAATCTTTGTTTAGTTAGTTTTGATTGTTATGGGGAAATAGTCCTCTCTCAGAAACTGTTCTTGGTGTCTTGTCTGTTACAGGTGAAACTGAATTATGCAGGATTAGGAAGATTACAAAATTAATGTATTATGCTATCATGATGCACCATTTAGAAGAAACCATACCAGTTTATCTATACTTATAAGTCATAACATGTGGAAATGACAGAGAAGTGAACAAGCGCATGTCAACATAGCACATAAAAATGAGTGAGTAGATGCATGGAAAGTTAGGGAAGCAGGAAAGGCAAGTAAAGAGAAAAAGGGTTATTCAAGGCTTGTTTGGTGTTAGGTCTTAATCCAATTTAGATTTAAGGAATGAAGCAGAAACTTTTGCTTGGGAAGCCCACTTTCAAAATTTTTTAGAGATCCGAAAAGGTTGAAAACACAGAGTTCAATTGAATGAAAATGAAGTTTCGTCTTAGTTCGTAAAGATGGTGTTATAATTTATAATAACCAGATGTGCATTGGAGAGGTGAGTGAAGCAAGCAGTAAACTTGAGGGAGTTCTTCAACCTTACGTGGGATTTCTTTTCTAGTGATACCATTCTACTGTGCATTTGAGGGAAGAACTTCTTCTGATAGCAGGGAGATCCGAAACCAGACTCTGCATTCACCATGGAGCTGTGAATCTCATGGGATAAAGGTATTTTTCTTCTCATAGAATGCAACATTGTCTTTGCCTAGGGAGTTTTTACTCAATAATCAGTATGTTTTCTAATCTTATCTTTTCCTTTCTTTTCTTTACATGTGCAGGTATTATAATTCTCAATCATTGTTTAATTTTTCTGGAAAAGAGGAAGTAGATTGCATGTTCTAATTGATTCCTTCTTCTAAATTTAAAGGTATGGATTGTTTGGGTTTCTTGGATAATCATTCAACTTTTTAAAATTGAGCCTATAAATACTAGTTTCACCTAGTTTTACAAATGTTTTCAAAATCCAAACCAAGTTTTGAAAACTAAGAAAAAAAGTAGTTCTTAGAATTTTTTTCTTTTGTTTTTGGAATTCGGCTAAGAATTCAAATGTTTACTTAAGAGGGATGAAAACCGAATGATTATCAAACGAGGTCTGAGTTGCTTCCTCCATTTTTTGCTTTTCACAAATTTCAGTTCCATTGAGCTGCATAAATCAGTCCTCCATAAATTGGGTTGTCAACCAGGATCAAAAGTCTTGGGTACAAAATGGAAAGAGGAGAGGAAGAGAGAGTGGGTGATTCAAGGGAGGGGAATGAGCAAGGGAAGGAGAGGAAGGAAGGAGAGAGAGGAAATATGAGAGAGAAATGGAGTAAGATAGATCTAATTTTTATATTTATCATAGTTTGAGGTTTTAATTTTTGCATTTATTAGTTTAAGTGTTTAATTTTTACTCTTGAAAGTTTAGGGGTCTAGGGTTAAATTTTGCACTTGAAAGTTTAGAGGGGTGCAATTGTTACCACCACCATACTAAGGATGGTTTTTGTG

mRNA sequence

ATGGCCGGAAAAGAGCAACGCTTGCCGAATAGAGACGAGCTCGCTGAATCCCTCAACGAATTCTTCACCAGCGTATCCGAAATGGTCAAATCGGACCTTCTTGGATCAAGTAATCAGCTGGCACTTTTAGAGAAAATGAATCTCAGGGTGGCCGAAGAGTACAAAGGTTTTGGCGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAATTGAAGTCAAAGAGTGGTGGCTTTGATGAGTACATAAACCAGATTGAGAAAATAGAGCATCAGGTGACTGAATTTGAAGCTGTAATTTCAATGCTTGACAAGCATGTTTCCATGCTGGATCCTCTCTCAGAAACTGTTCTTGGTGTCTTGTCTGTTACAGTGATACCATTCTACTGTGCATTTGAGGGAAGAACTTCTTCTGATAGCAGGGAGATCCGAAACCAGACTCTGCATTCACCATGGAGCTGTGAATCTCATGGGATAAAGGTATTATAA

Coding sequence (CDS)

ATGGCCGGAAAAGAGCAACGCTTGCCGAATAGAGACGAGCTCGCTGAATCCCTCAACGAATTCTTCACCAGCGTATCCGAAATGGTCAAATCGGACCTTCTTGGATCAAGTAATCAGCTGGCACTTTTAGAGAAAATGAATCTCAGGGTGGCCGAAGAGTACAAAGGTTTTGGCGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAATTGAAGTCAAAGAGTGGTGGCTTTGATGAGTACATAAACCAGATTGAGAAAATAGAGCATCAGGTGACTGAATTTGAAGCTGTAATTTCAATGCTTGACAAGCATGTTTCCATGCTGGATCCTCTCTCAGAAACTGTTCTTGGTGTCTTGTCTGTTACAGTGATACCATTCTACTGTGCATTTGAGGGAAGAACTTCTTCTGATAGCAGGGAGATCCGAAACCAGACTCTGCATTCACCATGGAGCTGTGAATCTCATGGGATAAAGGTATTATAA

Protein sequence

MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLDPLSETVLGVLSVTVIPFYCAFEGRTSSDSREIRNQTLHSPWSCESHGIKVL
Homology
BLAST of Spg018333 vs. NCBI nr
Match: XP_004137147.1 (biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis sativus] >KGN53763.1 hypothetical protein Csa_014951 [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 5.7e-48
Identity = 103/110 (93.64%), Postives = 108/110 (98.18%), Query Frame = 0

Query: 1   MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDV 60
           MA KE+RLPNRD+LAESLNEFFTSVSEM+KSDLLGSSNQL LLE+MNLRVAEEYKGFGDV
Sbjct: 1   MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDV 60

Query: 61  ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML+
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLE 110

BLAST of Spg018333 vs. NCBI nr
Match: XP_038880795.1 (biogenesis of lysosome-related organelles complex 1 subunit 2 [Benincasa hispida])

HSP 1 Score: 198.4 bits (503), Expect = 4.8e-47
Identity = 102/110 (92.73%), Postives = 108/110 (98.18%), Query Frame = 0

Query: 1   MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDV 60
           MA KE++ PNRDELAESLNEFFTSVSEM+KSDLLGSSNQLALLE+MNLRVAEEYKGFGDV
Sbjct: 1   MAQKEEQPPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNLRVAEEYKGFGDV 60

Query: 61  ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           ASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVISMLDKHVSML+
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSMLE 110

BLAST of Spg018333 vs. NCBI nr
Match: XP_008455567.1 (PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 1.1e-46
Identity = 101/110 (91.82%), Postives = 107/110 (97.27%), Query Frame = 0

Query: 1   MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDV 60
           MA KE+RLPNRDELAESLNEFFTSVSEM+KSDLLGSSNQL LLE+MN RVAEEYKG+GDV
Sbjct: 1   MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNSRVAEEYKGYGDV 60

Query: 61  ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           ASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVISMLDKHVSML+
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSMLE 110

BLAST of Spg018333 vs. NCBI nr
Match: XP_022949044.1 (biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita moschata] >XP_022997803.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita maxima])

HSP 1 Score: 191.8 bits (486), Expect = 4.5e-45
Identity = 98/107 (91.59%), Postives = 105/107 (98.13%), Query Frame = 0

Query: 4   KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASG 63
           +EQ+LPN DELAESLNEFFTSVSEM+KSDLLGSSNQLALLEKMNLRVAEEYKG GDVASG
Sbjct: 5   EEQQLPNSDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGLGDVASG 64

Query: 64  MRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           MRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLDKH+SML+
Sbjct: 65  MRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHISMLE 111

BLAST of Spg018333 vs. NCBI nr
Match: KAG7036775.1 (Kanadaptin [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.0 bits (484), Expect = 7.7e-45
Identity = 97/107 (90.65%), Postives = 105/107 (98.13%), Query Frame = 0

Query: 4   KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASG 63
           +EQ+LPN DELAESLNEFFTSVSEM+KSDLLGSSNQLALLEKMN+RVAEEYKG GDVASG
Sbjct: 5   EEQQLPNSDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNIRVAEEYKGLGDVASG 64

Query: 64  MRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           MRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLDKH+SML+
Sbjct: 65  MRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHISMLE 111

BLAST of Spg018333 vs. ExPASy Swiss-Prot
Match: F4K657 (Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Arabidopsis thaliana OX=3702 GN=BLOS2 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-30
Identity = 67/101 (66.34%), Postives = 85/101 (84.16%), Query Frame = 0

Query: 10  NRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVE 69
           +RD+LAESL   FTSVS MVKS+L G++N L LLEKMNLRVA EY   GDVA+G+RVF E
Sbjct: 4   SRDDLAESLQNLFTSVSSMVKSELQGTNNHLDLLEKMNLRVASEYDDMGDVAAGLRVFAE 63

Query: 70  QLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           Q+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+L+
Sbjct: 64  QMKSKSGGLDEFVGQMDAIEKQVSEFEAVISVLDRYVSVLE 104

BLAST of Spg018333 vs. ExPASy Swiss-Prot
Match: Q54Y67 (Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Dictyostelium discoideum OX=44689 GN=bloc1s2 PE=3 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 4.2e-09
Identity = 33/103 (32.04%), Postives = 57/103 (55.34%), Query Frame = 0

Query: 8   LPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVF 67
           LP  ++L  S  E FT VS  +KS+L  + +   LL +MN   + +Y+   +V  G+ VF
Sbjct: 72  LPVTEDLQNSTKEMFTKVSSYIKSELATTVSDYNLLIQMNNITSSKYQDMTNVTKGLSVF 131

Query: 68  VEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           +  LK K   F  Y ++I +++  VT+ E  + +LD++   L+
Sbjct: 132 MGDLKIKYEEFQPYFDKINELDKNVTDLEKTVQLLDEYTKRLE 174

BLAST of Spg018333 vs. ExPASy Swiss-Prot
Match: Q6QNY1 (Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Homo sapiens OX=9606 GN=BLOC1S2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.4e-04
Identity = 28/107 (26.17%), Postives = 49/107 (45.79%), Query Frame = 0

Query: 4   KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASG 63
           +E + P   ++ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  
Sbjct: 27  EEAKEPAEADITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAIN 86

Query: 64  MRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           +   ++ L  K  G   Y++QI  IE QV   E     LD +   L+
Sbjct: 87  ISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLE 133

BLAST of Spg018333 vs. ExPASy Swiss-Prot
Match: Q4R7C8 (Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Macaca fascicularis OX=9541 GN=BLOC1S2 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.4e-04
Identity = 28/107 (26.17%), Postives = 49/107 (45.79%), Query Frame = 0

Query: 4   KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASG 63
           +E + P   ++ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  
Sbjct: 27  EEAKEPAEADITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAIN 86

Query: 64  MRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           +   ++ L  K  G   Y++QI  IE QV   E     LD +   L+
Sbjct: 87  ISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLE 133

BLAST of Spg018333 vs. ExPASy Swiss-Prot
Match: Q32WR5 (Biogenesis of lysosome-related organelles complex-1 subunit 2 OS=Rattus norvegicus OX=10116 GN=Bloc1s2 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.0e-04
Identity = 28/107 (26.17%), Postives = 49/107 (45.79%), Query Frame = 0

Query: 4   KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASG 63
           +E + P   ++ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  
Sbjct: 27  EEAKEPAEADINELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAIN 86

Query: 64  MRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           +   ++ L  K  G   Y++QI  IE QV   E     LD +   L+
Sbjct: 87  ISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLE 133

BLAST of Spg018333 vs. ExPASy TrEMBL
Match: A0A0A0KW18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G123360 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.8e-48
Identity = 103/110 (93.64%), Postives = 108/110 (98.18%), Query Frame = 0

Query: 1   MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDV 60
           MA KE+RLPNRD+LAESLNEFFTSVSEM+KSDLLGSSNQL LLE+MNLRVAEEYKGFGDV
Sbjct: 1   MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDV 60

Query: 61  ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML+
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLE 110

BLAST of Spg018333 vs. ExPASy TrEMBL
Match: A0A1S3C0T0 (biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucumis melo OX=3656 GN=LOC103495715 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 5.2e-47
Identity = 101/110 (91.82%), Postives = 107/110 (97.27%), Query Frame = 0

Query: 1   MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDV 60
           MA KE+RLPNRDELAESLNEFFTSVSEM+KSDLLGSSNQL LLE+MN RVAEEYKG+GDV
Sbjct: 1   MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNSRVAEEYKGYGDV 60

Query: 61  ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           ASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVISMLDKHVSML+
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSMLE 110

BLAST of Spg018333 vs. ExPASy TrEMBL
Match: A0A6J1KEZ0 (biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111492648 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.2e-45
Identity = 98/107 (91.59%), Postives = 105/107 (98.13%), Query Frame = 0

Query: 4   KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASG 63
           +EQ+LPN DELAESLNEFFTSVSEM+KSDLLGSSNQLALLEKMNLRVAEEYKG GDVASG
Sbjct: 5   EEQQLPNSDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGLGDVASG 64

Query: 64  MRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           MRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLDKH+SML+
Sbjct: 65  MRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHISMLE 111

BLAST of Spg018333 vs. ExPASy TrEMBL
Match: A0A6J1GBP4 (biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111452507 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.2e-45
Identity = 98/107 (91.59%), Postives = 105/107 (98.13%), Query Frame = 0

Query: 4   KEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASG 63
           +EQ+LPN DELAESLNEFFTSVSEM+KSDLLGSSNQLALLEKMNLRVAEEYKG GDVASG
Sbjct: 5   EEQQLPNSDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGLGDVASG 64

Query: 64  MRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           MRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLDKH+SML+
Sbjct: 65  MRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHISMLE 111

BLAST of Spg018333 vs. ExPASy TrEMBL
Match: A0A6J1DL99 (biogenesis of lysosome-related organelles complex 1 subunit 2 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111022173 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 4.9e-37
Identity = 83/91 (91.21%), Postives = 88/91 (96.70%), Query Frame = 0

Query: 1  MAGKEQRLPNRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDV 60
          MAGKE++LPNRDELA SLNEFFTSVS+M+KSDLLGSSNQLALLEKMNLRVAEEYKGFGDV
Sbjct: 1  MAGKEEQLPNRDELAVSLNEFFTSVSQMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDV 60

Query: 61 ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQ 92
          ASGMRVFVEQLKSKSGGFD YI+QIE IEHQ
Sbjct: 61 ASGMRVFVEQLKSKSGGFDAYISQIENIEHQ 91

BLAST of Spg018333 vs. TAIR 10
Match: AT5G49550.1 (Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1. )

HSP 1 Score: 134.0 bits (336), Expect = 1.0e-31
Identity = 67/101 (66.34%), Postives = 85/101 (84.16%), Query Frame = 0

Query: 10  NRDELAESLNEFFTSVSEMVKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVE 69
           +RD+LAESL   FTSVS MVKS+L G++N L LLEKMNLRVA EY   GDVA+G+RVF E
Sbjct: 4   SRDDLAESLQNLFTSVSSMVKSELQGTNNHLDLLEKMNLRVASEYDDMGDVAAGLRVFAE 63

Query: 70  QLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLD 111
           Q+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+L+
Sbjct: 64  QMKSKSGGLDEFVGQMDAIEKQVSEFEAVISVLDRYVSVLE 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004137147.15.7e-4893.64biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis sativus] ... [more]
XP_038880795.14.8e-4792.73biogenesis of lysosome-related organelles complex 1 subunit 2 [Benincasa hispida... [more]
XP_008455567.11.1e-4691.82PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumi... [more]
XP_022949044.14.5e-4591.59biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita moschat... [more]
KAG7036775.17.7e-4590.65Kanadaptin [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
F4K6571.5e-3066.34Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Arabidopsis tha... [more]
Q54Y674.2e-0932.04Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Dictyostelium d... [more]
Q6QNY12.4e-0426.17Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Homo sapiens OX... [more]
Q4R7C82.4e-0426.17Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Macaca fascicul... [more]
Q32WR54.0e-0426.17Biogenesis of lysosome-related organelles complex-1 subunit 2 OS=Rattus norvegic... [more]
Match NameE-valueIdentityDescription
A0A0A0KW182.8e-4893.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G123360 PE=3 SV=1[more]
A0A1S3C0T05.2e-4791.82biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucumis melo OX... [more]
A0A6J1KEZ02.2e-4591.59biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucurbita maxim... [more]
A0A6J1GBP42.2e-4591.59biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucurbita mosch... [more]
A0A6J1DL994.9e-3791.21biogenesis of lysosome-related organelles complex 1 subunit 2 isoform X4 OS=Momo... [more]
Match NameE-valueIdentityDescription
AT5G49550.11.0e-3166.34Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction wi... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..98
NoneNo IPR availablePANTHERPTHR47882BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2coord: 6..110
IPR019269Biogenesis of lysosome-related organelles complex-1, subunit 2PFAMPF10046BLOC1_2coord: 20..109
e-value: 1.6E-23
score: 82.9

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg018333.1Spg018333.1mRNA