Spg018057 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg018057
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold9: 27192386 .. 27193666 (-)
RNA-Seq Expression	Spg018057
Synteny	Spg018057

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAACAAGAGCAAGAAAAGAAAGGGAGAATGAGGAAGATGAGGTACCTGTTACCCCCGAGGTACAGAAAGTGAAAACGAAGAAGAAGAAGACGTCAGAGGAGAAAGAAGCCAAAAGAAGACGGAGGCAGCAACGGGCTGAAGAGCAAGAGGCTGTCCAAGAGGCGACAAACGATGTTGTCACTACATGGAGGAAGGAAATCCGAAAGAATCTGAGGTGCAAAATCCAGAGGAGGTAGAACCGATAGTCGTAGATGCGGACAGAATTCAAGAAGAGAATACTGAGGGGAATCAAGAAAAACAGACTGACGAGGTGCAAGAAGAACTGGCGGAGGTTGCGCCTGAGGAAGGTAATGGACAAGAGCAAGAGGCTCGGGTTGAGGTCATCATGCCAGAAGTACCGAAATGACGCCGCATAAAGCGAAAGGCTGGGTGCGTCCAGGTAACTCGAACTGACACCCCATCACCACCGTCGTCGGATTCTGAGAAAGAGAAGGCAGAGCGAGAGGAACGAGAGAAAAAAGAAGTTGAGGACAGAGAGAGAGAAGAAGCAGCAGAAGAGACTTTGAGAAAGCTTAGAGAGGACAGAGGCAAAGGAATTGTTGAAGCATCGGATGAACCTGTAGAGGAAGTAAGAGAAGGACCTTTCATCCGCTTCATCAATAAGCTTGCTCGAGCAAAATATCGAGAGATGCTGAGAAGAGATTTCTTATTCGAAAGACGATTTGGTGACGATCTACCCCATTTCTTAGGAGCAGGAATTGCGAATCTTGGGTGGAGTCAGTTCTGTGCAAAACCGGACCCAGTGAATTCGAATATTGTTCGAGAATTCTGTGCGAATATTGATAATGCGCAAGAAGGTGGGGTAGCTGTTTTTCCCGAACACAATCACGATGTTATGCAGAAGGGCAGGAGTGCCCACGGTTCCAAAGGATGTAATTTTGCTTGACAAGGGAATCATAGATACGCTTAATCTGGCGCGGCTTCAGCATACACAGGAGGCACGCTAGGGTGGGCTAGTGTGTGGAATTCATCAGATCCTAGAGCAACTGGCACTGTCGGCTAGTAGACAAGAGTTTGCTGAAAGGCAAGCTCAAACCTATTGGACCTATGCTAAAAGGAGAGATGACACACTCATGAGGGCCTTGCAATCCAATTTCTCCAAACCATATCAGGCCTTCCCTGTGTTTCCCGATGATTTATTTAACCCCTGGATACCGCCCCCACCTGTCGAAAGAGAAGAAGATGATGATGAAGAACAGGGTCAGGAAGATTGA

mRNA sequence

ATGGCGAAAACAAGAGCAAGAAAAGAAAGGGAGAATGAGGAAGATGAGGTACCTGTTACCCCCGAGGTACAGAAAGTGAAAACGAAGAAGAAGAAGACGTCAGAGGAGAAAGAAGCCAAAAGAAGACGGAGGCAGCAACGGGCTGAAGAGCAAGAGGCTGTCCAAGAGGCGACAAACGATGTTGTCACTACATGGAGGAAGGAAATCCGAAAGAATCTGAGGTGCAAAATCCAGAGGAGGTGCAAGAAGAACTGGCGGAGGTTGCGCCTGAGGAAGGTAACTCGAACTGACACCCCATCACCACCGTCGTCGGATTCTGAGAAAGAGAAGGCAGAGCGAGAGGAACGAGAGAAAAAAGAAGTTGAGGACAGAGAGAGAGAAGAAGCAGCAGAAGAGACTTTGAGAAAGCTTAGAGAGGACAGAGGCAAAGGAATTGTTGAAGCATCGGATGAACCTGTAGAGGAAGTAAGAGAAGGACCTTTCATCCGCTTCATCAATAAGCTTGCTCGAGCAAAATATCGAGAGATGCTGAGAAGAGATTTCTTATTCGAAAGACGATTTGGTGACGATCTACCCCATTTCTTAGGAGCAGGAATTGCGAATCTTGGGTGGAGTCAGTTCTGTGCAAAACCGGACCCAGTGAATTCGAATATTGTTCGAGAATTCTGTGCGAATATTGATAATGCGCAAGAAGGTGGGGTAGCTGTTTTTCCCGAACACAATCACGATGTTATGCAGAAGGGCAGGAGTGCCCACGTGTGTGGAATTCATCAGATCCTAGAGCAACTGGCACTGTCGGCTAGTAGACAAGAGTTTGCTGAAAGGCAAGCTCAAACCTATTGGACCTATGCTAAAAGGAGAGATGACACACTCATGAGGGCCTTGCAATCCAATTTCTCCAAACCATATCAGGCCTTCCCTGTGTTTCCCGATGATTTATTTAACCCCTGGATACCGCCCCCACCTGTCGAAAGAGAAGAAGATGATGATGAAGAACAGGGTCAGGAAGATTGA

Coding sequence (CDS)

ATGGCGAAAACAAGAGCAAGAAAAGAAAGGGAGAATGAGGAAGATGAGGTACCTGTTACCCCCGAGGTACAGAAAGTGAAAACGAAGAAGAAGAAGACGTCAGAGGAGAAAGAAGCCAAAAGAAGACGGAGGCAGCAACGGGCTGAAGAGCAAGAGGCTGTCCAAGAGGCGACAAACGATGTTGTCACTACATGGAGGAAGGAAATCCGAAAGAATCTGAGGTGCAAAATCCAGAGGAGGTGCAAGAAGAACTGGCGGAGGTTGCGCCTGAGGAAGGTAACTCGAACTGACACCCCATCACCACCGTCGTCGGATTCTGAGAAAGAGAAGGCAGAGCGAGAGGAACGAGAGAAAAAAGAAGTTGAGGACAGAGAGAGAGAAGAAGCAGCAGAAGAGACTTTGAGAAAGCTTAGAGAGGACAGAGGCAAAGGAATTGTTGAAGCATCGGATGAACCTGTAGAGGAAGTAAGAGAAGGACCTTTCATCCGCTTCATCAATAAGCTTGCTCGAGCAAAATATCGAGAGATGCTGAGAAGAGATTTCTTATTCGAAAGACGATTTGGTGACGATCTACCCCATTTCTTAGGAGCAGGAATTGCGAATCTTGGGTGGAGTCAGTTCTGTGCAAAACCGGACCCAGTGAATTCGAATATTGTTCGAGAATTCTGTGCGAATATTGATAATGCGCAAGAAGGTGGGGTAGCTGTTTTTCCCGAACACAATCACGATGTTATGCAGAAGGGCAGGAGTGCCCACGTGTGTGGAATTCATCAGATCCTAGAGCAACTGGCACTGTCGGCTAGTAGACAAGAGTTTGCTGAAAGGCAAGCTCAAACCTATTGGACCTATGCTAAAAGGAGAGATGACACACTCATGAGGGCCTTGCAATCCAATTTCTCCAAACCATATCAGGCCTTCCCTGTGTTTCCCGATGATTTATTTAACCCCTGGATACCGCCCCCACCTGTCGAAAGAGAAGAAGATGATGATGAAGAACAGGGTCAGGAAGATTGA

Protein sequence

MAKTRARKERENEEDEVPVTPEVQKVKTKKKKTSEEKEAKRRRRQQRAEEQEAVQEATNDVVTTWRKEIRKNLRCKIQRRCKKNWRRLRLRKVTRTDTPSPPSSDSEKEKAEREEREKKEVEDREREEAAEETLRKLREDRGKGIVEASDEPVEEVREGPFIRFINKLARAKYREMLRRDFLFERRFGDDLPHFLGAGIANLGWSQFCAKPDPVNSNIVREFCANIDNAQEGGVAVFPEHNHDVMQKGRSAHVCGIHQILEQLALSASRQEFAERQAQTYWTYAKRRDDTLMRALQSNFSKPYQAFPVFPDDLFNPWIPPPPVEREEDDDEEQGQED

Homology

The following BLAST results are available for this feature:

BLAST of Spg018057 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018057 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018057 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018057 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 23..60
None	No IPR available	COILS	Coil	Coil	coord: 104..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 316..337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg018057.1	Spg018057.1	mRNA