
Spg018051 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCTTGGAAAGGGGGTAGCGTCGCGACGCTATACGGCACAGCGTCGCGACGCTGTGACGTCATCGACTTGCCGGCCAAGAAATGGACAACGTCGCGACGCTGTCTTTACAGCGTCTCGACGCTGTCTTTACAGCGTCTCGACGCTAGGCATTTTCCAGAACTTCCAGCTGCGGATTGGGCTTCTTTTCTTGGGCCAACTTCAATTCTTTTTGGGCTTTTTCTTCATAGTTGTCCTCTTTTGACTCCCTTTGACCCAATCATGGAAATTGGGCTTGAATGGCTTTATTTTGGGCACTTTTATCACCAAAATCCATAGGTATCTCCTAAAGACCAAATAACAAAATATATGAAATATTTTCAATAAAAACACAATTAAAGCACAAAAAAGCTTAATAAATTGAGAGTAAAATAGCGACATTTCTGCTCGCTATCAATCACACTCCTCTTGCTGTTGCAAATAGGATCTCATAATTGATTGAAGAATTCTCTAAGGACAAGGTTGCAGTCAAAGACAACCTGTTGTTCGAATCTGTCACTCCAACATCTGAGCAGCCAAAGGATATACTAAATCCTCATGCGATGTCTGTCATGATGGCTGACGTAGACCATGATGAAAGGATGGCGGAGATGGAAAGAAAACTCAATCTCCTAATGAAGGCAGTTGATGAAAGAGATCATGAGATTGCCTATTTGAAGAACCAGCTACAAAATCGAGAAACGACTGAGTCTAGCCATACCCCTACTGCAGGAAAGAATGATAAGAGGAAGGCTGTCATGCATGAGGACCCGCAACAACACTCTGCGTCAGTTGCCTATTTGTCTGTCCAACAGCTGCAGGACATGATCATGAATTCCATCAGGGCTCAATATGGTGGACTTTCTCAAAGTTCTCTCTTGTATTCCAAACCTAATATAAAGAGGATTGACAATCTGAGAATGCCCACTGGGTATCAGCCTCCCAAGTTCCAACAATTTGATGGAAAGGGCAATCCAAAGCAACACATCGCCCACTTCGTTGAAACCTGCGAGAACGCTGGAACTCAGGGAGACTTGCTTGTCACACAGTTTGTCCGAACACTAAAAGGAAATGCGTTTGATTGGTAAATGGACTTGGAGCCTGAGACAATTGATAGCTGGGAACAGATTGAGAGAGAGTTTCTGAATCGCTTCTACAGTAGGAGGCGAACAGTTAGTATGACGGAACTCACGAACACAGAGCAACGGAAGGGTGAGCCAGTCATTGACTACATCAATCGTTGGAGAGTCTTGAGTCTCAACTATAAAGATAGACTCTCTGTTGCTCACCGCAAGCGTACGGGTCGTCACAAGTAATATAGTGATTTTGAGTATAGAGTATTGTCTCCACAGGGATTGGATTTATTCAATTAATTACCACGAATACTCTTGCTTAGCTTTATTTAGAGAACAAAATCTAATGCCAACAAGAATACAAAAAGCTAACCTAGAAAGCAAAAGATAAATGGAGACACAATTTGGTGGGATAATTCTAGAGTGGTTGATTTCGACAATTGGATCTTTAATGCACAATCAATTAACTAACTTGGATTAATCAATCATTTGATTCATAAGTCTAGAAGCCTAATGACAAGGACTCTCCTGTCGGTCTCCTCCTATCTCATACCTTTCAATAAAGAATCTCCTTTCAGTCTCATCTTTATTTAGTTAGCATGGCATTACGACCCTTCAGTACAACCTCTAACGTTATTTATTTTATCCCGTGTCACTCGGGTAAATAATCGTTAGTCATGCATTCAGTTCTAGTCTAAGCTTCTCTCCGTCGAGTTTCCACTTAGTAACGATTCATTTAATCAGTGATCAGTTGATTAAAAGCATTACGGACAAAATGCATAAATGAACAATAATGACAATTAAACCAAATAAATTCATTAATTCAGCAAAGGTTCAACATCTAAATCAATCTCATAGAATTTAGGAATTTACTACTCATAATCACTAAAATTCAATAATTCCTAATCACAACAATTCTAGAAACTAGAACAAAAAGGAAAAGGGAAGAGAAATGCTCATAAAAGTGTCGATCTCCTCGATCCCGCGCCGACCTCCATCGATCCCGAGCTCCAAAGATCTTCAACAAAGCTCCAAAACTCTCCCAAAAATCCCCAATTTTAGTGTGGATTCTAGAATGGGGTGAAAACCCACAAATTGGCACACAAAACTTGGATGCAAATGGCCCCTTTTATAGGCTCCCAGCAGGCGTAGCGTCGAGACGCTCTGACGTCATCTTTTCTTGGGCTCCAAGACGTCGCAGCGTCGAGACGCTACATGGACAGCGTCGCGACGCTATCGCGATTCCAGAACTCTCCACGCGGCTGCCTAGCGTCGGGACGCTCCAGGCTTAG GCTTGGAAAGGGGGTAGCGTCGCGACGCTATACGGCACAGCGTCGCGACGCTGTGACGTCATCGACTTGCCGGCCAAGAAATGGACAACGTCGCGACGCTGTCTTTACAGCGTCTCGACGCTGTCTTTACAGCGTCTCGACGCTAGGCATTTTCCAGAACTTCCAGCTGCGGATTGGGCTTCTTTTCTTGGGCCAACTTCAATTCTTTTTGGGCTTTTTCTTCATAAATTCTCTAAGGACAAGGTTGCAGTCAAAGACAACCTGTTGTTCGAATCTGTCACTCCAACATCTGAGCAGCCAAAGGATATACTAAATCCTCATGCGATGTCTGTCATGATGGCTGACGTAGACCATGATGAAAGGATGGCGGAGATGGAAAGAAAACTCAATCTCCTAATGAAGGCAGTTGATGAAAGAGATCATGAGATTGCCTATTTGAAGAACCAGCTACAAAATCGAGAAACGACTGAGCTCCCAGCAGGCGTAGCGTCGAGACGCTCTGACGTCATCTTTTCTTGGGCTCCAAGACGTCGCAGCGTCGAGACGCTACATGGACAGCGTCGCGACGCTATCGCGATTCCAGAACTCTCCACGCGGCTGCCTAGCGTCGGGACGCTCCAGGCTTAG GCTTGGAAAGGGGGTAGCGTCGCGACGCTATACGGCACAGCGTCGCGACGCTGTGACGTCATCGACTTGCCGGCCAAGAAATGGACAACGTCGCGACGCTGTCTTTACAGCGTCTCGACGCTGTCTTTACAGCGTCTCGACGCTAGGCATTTTCCAGAACTTCCAGCTGCGGATTGGGCTTCTTTTCTTGGGCCAACTTCAATTCTTTTTGGGCTTTTTCTTCATAAATTCTCTAAGGACAAGGTTGCAGTCAAAGACAACCTGTTGTTCGAATCTGTCACTCCAACATCTGAGCAGCCAAAGGATATACTAAATCCTCATGCGATGTCTGTCATGATGGCTGACGTAGACCATGATGAAAGGATGGCGGAGATGGAAAGAAAACTCAATCTCCTAATGAAGGCAGTTGATGAAAGAGATCATGAGATTGCCTATTTGAAGAACCAGCTACAAAATCGAGAAACGACTGAGCTCCCAGCAGGCGTAGCGTCGAGACGCTCTGACGTCATCTTTTCTTGGGCTCCAAGACGTCGCAGCGTCGAGACGCTACATGGACAGCGTCGCGACGCTATCGCGATTCCAGAACTCTCCACGCGGCTGCCTAGCGTCGGGACGCTCCAGGCTTAG AWKGGSVATLYGTASRRCDVIDLPAKKWTTSRRCLYSVSTLSLQRLDARHFPELPAADWASFLGPTSILFGLFLHKFSKDKVAVKDNLLFESVTPTSEQPKDILNPHAMSVMMADVDHDERMAEMERKLNLLMKAVDERDHEIAYLKNQLQNRETTELPAGVASRRSDVIFSWAPRRRSVETLHGQRRDAIAIPELSTRLPSVGTLQA Homology
BLAST of Spg018051 vs. NCBI nr
Match: KAA0051508.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 1.5e-11 Identity = 45/121 (37.19%), Postives = 74/121 (61.16%), Query Frame = 0
BLAST of Spg018051 vs. NCBI nr
Match: TYK24158.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 1.5e-11 Identity = 45/121 (37.19%), Postives = 74/121 (61.16%), Query Frame = 0
BLAST of Spg018051 vs. NCBI nr
Match: KAA0039558.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.5 bits (197), Expect = 1.9e-11 Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 0
BLAST of Spg018051 vs. NCBI nr
Match: XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus]) HSP 1 Score: 79.7 bits (195), Expect = 3.2e-11 Identity = 43/79 (54.43%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of Spg018051 vs. NCBI nr
Match: XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus]) HSP 1 Score: 79.7 bits (195), Expect = 3.2e-11 Identity = 43/79 (54.43%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of Spg018051 vs. ExPASy TrEMBL
Match: A0A5A7U8B3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00300 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 7.0e-12 Identity = 45/121 (37.19%), Postives = 74/121 (61.16%), Query Frame = 0
BLAST of Spg018051 vs. ExPASy TrEMBL
Match: A0A5D3DKU9 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold610G00640 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 7.0e-12 Identity = 45/121 (37.19%), Postives = 74/121 (61.16%), Query Frame = 0
BLAST of Spg018051 vs. ExPASy TrEMBL
Match: A0A5A7T9K9 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold744G00280 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 9.2e-12 Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 0
BLAST of Spg018051 vs. ExPASy TrEMBL
Match: A0A5D3DET6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00310 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.7e-11 Identity = 45/88 (51.14%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of Spg018051 vs. ExPASy TrEMBL
Match: A0A5A7TV22 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00590 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 3.5e-11 Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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