Spg017975 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017975
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Uncharacterised conserved protein UCP009193
Location	scaffold9: 27782646 .. 27783855 (+)
RNA-Seq Expression	Spg017975
Synteny	Spg017975

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAGAAGCGGAAATCCATCGCTACCAGCCTCGACGAGGTAGATCGGACCATGTACGCCTCTTTTTGCAGTGCGGCTAACTCTCTCTCGCAGCTTTACACCCAGGCTATGAACCACCAGAAACTCTCTTTCCAAGCCGGAGAACGTCACGCCATGGTGTGGAATTTCATCTGTTTTACCCCCATTGAATCTGCCCCTGTTCCCCCCCTTTTGGATTTTATCATGTTTTTCTGTTTCTCCTTTGTGTACTCGAAATTGATTTTATTAGACGTGATTTTTGATTGTTGGTTATATCATCTGTATTTGTCATGAGTTCTTGGTTTTACGATTCCGGGTAGTTTCATGTATTCTGAGAATTTAGGTAGTATAAATCATACGTATTTCTGCTTGAAAATCTCAGCATTAACAATTGATGAAAGTATAGAATGTTCGTATTTGTCTGTCTGTTTGGCTATACTGTTTTTCATCCTTATTTGTTTTTGCCTTTTACCAGTTGATTCTTGATAGAGAATATATACCGTTCATACGTTGCGATGAGGGTCTTTTTATGGTTAACCTTTGCTAACGGGATGACTAGAGTCGAATGTCCTATGTTGTCTTTTTGTTTCACATTTCAATGTTTCGTGTTTATCCTTTGTTATTAGGGGATCATTGATTGTTAGACTAGCAGAATAGGGATGCTATTGTATTCACTATAGAAGGATGCAAGACATAGTTGAATGGATATATAATGTGAAATAAAACCAAGCCTTGATTTCGTGTAAAGAAAAATCAAGGTTTGCTTAAAAATATCCTTGCGCTAAGCCCTACTACTGATACTTATAGTTGAATGGGTGAATAGATGTCTCTTGATCAACTATATTCTCAACTTTCTTAGAAATCGTAAATGCCAAAACTCAAACTGAGTTTATTGTGTATTGGATCTTTTCTTGTTTGGTTCTTTTTTGGCCTTTCTGAGTGACTTGATGCTGGAAACAACCGAAGACAATAGGGATTGAAGACAATGGGGACTGGAGATTAGAGGAATAACATGAAAAAAACATAGTTGATGAATTTGTTTGGTTTTTTTTGTATAAATGAGAGGTTCAAAGTAGGAGAATGTAAATGGATTTCCAATGGGTTTTCTTGCTCTTACTTTTCTAGCCTTGACATTTTCGATGCTAAGGTTCTTCAGATCAATAGTTTGAAGGCTTTGGCTAATGGCTAG

mRNA sequence

ATGGCCAAGAAGCGGAAATCCATCGCTACCAGCCTCGACGAGGTAGATCGGACCATGTACGCCTCTTTTTGCAGTGCGGCTAACTCTCTCTCGCAGCTTTACACCCAGGCTATGAACCACCAGAAACTCTCTTTCCAAGCCGGAGAACGTCACGCCATGGTGTGGAATTTCATCTGTTTTACCCCCATTGAATCTGCCCCTGTTCCCCCCCTTTTGGATTTTATCATCCTTGACATTTTCGATGCTAAGGTTCTTCAGATCAATAGTTTGAAGGCTTTGGCTAATGGCTAG

Coding sequence (CDS)

ATGGCCAAGAAGCGGAAATCCATCGCTACCAGCCTCGACGAGGTAGATCGGACCATGTACGCCTCTTTTTGCAGTGCGGCTAACTCTCTCTCGCAGCTTTACACCCAGGCTATGAACCACCAGAAACTCTCTTTCCAAGCCGGAGAACGTCACGCCATGGTGTGGAATTTCATCTGTTTTACCCCCATTGAATCTGCCCCTGTTCCCCCCCTTTTGGATTTTATCATCCTTGACATTTTCGATGCTAAGGTTCTTCAGATCAATAGTTTGAAGGCTTTGGCTAATGGCTAG

Protein sequence

MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAMVWNFICFTPIESAPVPPLLDFIILDIFDAKVLQINSLKALANG

Homology

[Close]

BLAST of Spg017975 vs. NCBI nr
Match: XP_008461917.1 (PREDICTED: uncharacterized protein LOC103500405 [Cucumis melo] >KAA0059559.1 uncharacterized protein E6C27_scaffold518G00760 [Cucumis melo var. makuwa] >TYK29967.1 uncharacterized protein E5676_scaffold1449G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 54
          MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM
Sbjct: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 53

[Close]

BLAST of Spg017975 vs. NCBI nr
Match: KAG7037237.1 (hypothetical protein SDJN02_00860 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 54
          MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM
Sbjct: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 53

[Close]

BLAST of Spg017975 vs. NCBI nr
Match: XP_004139686.1 (uncharacterized protein LOC101216474 [Cucumis sativus] >KAE8646181.1 hypothetical protein Csa_016152 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 54
          MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM
Sbjct: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 53

[Close]

BLAST of Spg017975 vs. NCBI nr
Match: XP_038898287.1 (uncharacterized protein LOC120085990 [Benincasa hispida])

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 54
          MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM
Sbjct: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 53

[Close]

BLAST of Spg017975 vs. NCBI nr
Match: XP_022981604.1 (uncharacterized protein LOC111480673 [Cucurbita maxima])

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 54
          MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM
Sbjct: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 53

[Close]

BLAST of Spg017975 vs. ExPASy TrEMBL
Match: A0A0A0K440 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298765 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.8e-24
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAMVWNFIC 60
          MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAMVWNFIC
Sbjct: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAMVWNFIC 59

[Close]

BLAST of Spg017975 vs. ExPASy TrEMBL
Match: A0A5A7V1A5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1449G00010 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 54
          MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM
Sbjct: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 53

[Close]

BLAST of Spg017975 vs. ExPASy TrEMBL
Match: A0A6J1J2B9 (uncharacterized protein LOC111480673 OS=Cucurbita maxima OX=3661 GN=LOC111480673 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 54
          MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM
Sbjct: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 53

[Close]

BLAST of Spg017975 vs. ExPASy TrEMBL
Match: A0A6J1EKM5 (uncharacterized protein LOC111433447 OS=Cucurbita moschata OX=3662 GN=LOC111433447 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 54
          MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM
Sbjct: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 53

[Close]

BLAST of Spg017975 vs. ExPASy TrEMBL
Match: A0A1S3CFN6 (uncharacterized protein LOC103500405 OS=Cucumis melo OX=3656 GN=LOC103500405 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 54
          MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM
Sbjct: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 53

[Close]

BLAST of Spg017975 vs. TAIR 10
Match: AT4G09830.1 (Uncharacterised conserved protein UCP009193 )

HSP 1 Score: 90.1 bits (222), Expect = 1.0e-18
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 54
          M KKRKS ATSLDEVDRT+YASF +AANSLSQLYTQ+MNHQKLSFQAGERH +
Sbjct: 1  MGKKRKSTATSLDEVDRTVYASFRTAANSLSQLYTQSMNHQKLSFQAGERHGL 53

[Close]

BLAST of Spg017975 vs. TAIR 10
Match: AT5G64780.1 (Uncharacterised conserved protein UCP009193 )

HSP 1 Score: 78.2 bits (191), Expect = 4.1e-15
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 1  MAKKRKSIATSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAM 54
          M KKRKS AT LDEVDRTMY +F  AANSLSQLYT AMNHQ++SF AGER  M
Sbjct: 1  MGKKRKSEATRLDEVDRTMYGAFRGAANSLSQLYTHAMNHQRVSFLAGERRGM 53

The following BLAST results are available for this feature:

BLAST of Spg017975 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461917.1	4.3e-19	100.00	PREDICTED: uncharacterized protein LOC103500405 [Cucumis melo] >KAA0059559.1 unc...	[more]
KAG7037237.1	4.3e-19	100.00	hypothetical protein SDJN02_00860 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_004139686.1	4.3e-19	100.00	uncharacterized protein LOC101216474 [Cucumis sativus] >KAE8646181.1 hypothetica...	[more]
XP_038898287.1	4.3e-19	100.00	uncharacterized protein LOC120085990 [Benincasa hispida]	[more]
XP_022981604.1	4.3e-19	100.00	uncharacterized protein LOC111480673 [Cucurbita maxima]	[more]

BLAST of Spg017975 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg017975 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K440	4.8e-24	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298765 PE=4 SV=1	[more]
A0A5A7V1A5	2.1e-19	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1J2B9	2.1e-19	100.00	uncharacterized protein LOC111480673 OS=Cucurbita maxima OX=3661 GN=LOC111480673...	[more]
A0A6J1EKM5	2.1e-19	100.00	uncharacterized protein LOC111433447 OS=Cucurbita moschata OX=3662 GN=LOC1114334...	[more]
A0A1S3CFN6	2.1e-19	100.00	uncharacterized protein LOC103500405 OS=Cucumis melo OX=3656 GN=LOC103500405 PE=...	[more]

BLAST of Spg017975 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09830.1	1.0e-18	84.91	Uncharacterised conserved protein UCP009193	[more]
AT5G64780.1	4.1e-15	75.47	Uncharacterised conserved protein UCP009193	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33675:SF3	HOLOCARBOXYLASE SYNTHETASE	coord: 1..53
None	No IPR available	PANTHER	PTHR33675	NUCLEAR RECEPTOR FAMILY 2 GROUP C PROTEIN	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017975.1	Spg017975.1	mRNA