Spg017970 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017970
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold9: 28861260 .. 28866469 (-)
RNA-Seq Expression	Spg017970
Synteny	Spg017970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAAATTCCCAAACCAAATAGTACAAAACAAAATGCCTCCAACACCCAATTTGTAGCCCTGTATTTAGACTCAGTCGTCATTGTGCAGAGGAAACATTTCCATGACAGTTGGAATGATATCATGCAAGCCTTTCAACAATCCCTCTCGGCTTATTCCTCGATCAGCCCCCTACAGCCAGACAAAGCCCTTCTCTCTTGCGAAGACAAGGAACAAGCCAGCGTACTAGCAAATATTAAAGGGTGGTGCAAGGTTGGAAGATACCAAGTTTGTTTTCTCCCATGGAGTTCGGAAGCCATGAATGGTGACCAAAAGGTGTCGTCATTCGGGGGCTGGATTAAAGTTCGAAATCTTCCTCTCGATAAATGGAATCTTCAAAACTTCAAAAAGATAGGAGATGAGTGTGGTGGGTATATGGAAACAGCAAGCAAAACCCTATCTAGAATGGACATGATGGAGATAGGGAAAGATAAAGGAAAATCACACGGGGTTTATTCCGGTCGAAGTTCATCTCCCATCTTCTTCAAAAGGTCCCATCGTTGTTAAAATCGATCCTTTATTTGTGGAAGAATTCAATATTGGATACATAGCCAAAATCCATGGGAAAATCCCAAAAGCCCTAATGAAACCATTCCCACGTGTCGGCATGGATAAAGACAAAGATAGAGTATTCGAAGAAGTTCAACCACGAGCCATCCTTAGCATGGAAGAGAAAGATGGAGAGAATCCCCAAGCAACGTAGAGTTGCATACCCCAAGAAGCCCCTATTGATATCTTGTTTACAGAAAAATACGTGGATCAGACTACTTCCACAGACCTGGGCCCACAGACAGCACCTTCCCCAAAGCTCCAGGAAAAACCCCAATCTAAAATATCCACTCCCATCAGTCATGTTGGGTCCCACTCCACAAAAGCCCCCAATAAAAAAACCAAGACTTAAACTCGAGATCTCCCCCCAATCCCAAAGTAACCTGCTCCAACCCCCAACCAACCATTAGCCCGATTCCTAAAAGCCCAACCCTATCCTAGGAAAATTCGAATGAAAGAAAAAAGCTCATTATCATCAATAACAAGGAGACCTACCTTCTCACGAGCACAAAACAATCCACCAACACAGCTTTTCCCTTGTTAGAGTCATAGGGGGTTGTTTCCTCACCATGCTCTCCTTACACAGATCACTCTCCTATATCACACCAACCCAGGGACTATCAGCAGGCCATCTCCCCGCCGACCATTACCAACCTCTTTGACACACTTGATGAACAACCTCACCCTGATAGCCCCATCCCGCTGCGGATTGAAGACCCGAATGACACAGAAAAGGAGCAGAGATTGTGTGTTGAAACATCAGCCCTAGTTGATATAAGTGTGGGAGAAATACAAGAGGAGGATTCAGAATCAGAGTTTCCATATCAGGCAAGCGATCCTGCGGTTTTCTTGCCAGTTCTTTTCCCTTGGCTGGCTAAACATGGTATATGCATTATGCCAATGTCGAGTAGACAAAATCTCACCAACACTGCCAAAAAGAAGACATATGGGTGAAAGAATTATAGAACCTACACTCCTCTGTAAACTACAACAAGAATCCAACATGTTACCAATTGGGAGGGCCAATGAATCCTAAATGATTTTTATTTCATGGAATGTGTGGGGTCTTGGCTCTTGGAAAAAAAGAGCTCTTATCAAAGATTTCCTCTCCTCCCACAATCCAGCTTTAGTGATTCTTCAAGAGACGAAGCTCTCAACCATCAATAGAATAATTGTGAAATCGGTTTGGAGCTCGAGGAATATTACCTGGGCTTCGGTTGATGCTATTGGTGCCTCGGGAGGGATTGTAATCCTGTGGAATGAATCCACCTTTGATGTTCTCGAGATTTTCGAAGGTATTTTCTCTTTATCTATCCATCTCTCGCTTGCTGATGGTTTTTCCTTTTGGATCACAGGAGTATATGGCCCCAATTTTTCACGTGAGAGAAAATCATTTTGGAAGGAATTATCTGATTTGCAAGCCATATGCCTTCCAAACTGGATTATGGGGGGAGATTACAATATTACTAGATGGACTATGGAAAAATCAACCTTCCGAGCCCCTACTCGTGGCATGAAAAAATTCAATAGATTTATTGAAGATGCTGCTTTACAGGACATCCATTTATCCAACGACAAATACATTTGGTCTAGTTGTCGCCCAAACCTCAGCATGACTCTCATTGACCGGTTTTTTATATCAGAAAATATTGCTTCCAAATTCGATTCTGTAAATGCTATAAGACTTGACAGAGTTACTTCGGATCACTCCCCTATATGCCTCATGTTAGGAAAAGAAAAGTGGGGCCCCTCTCCCTTTCGCCTTATAAATGCTTGGTTATCTAACAACTCCTTTTTTAGTACAGTCGACTCTTGGTGGAAGGACAACACATCTCATGGTTGGTCGGGTCATGGTTTTATTCAAAAATTAAAAGGATTGAAACAGGAACTAAGAATTTGCAATTAGCAATCTTTTGGCCAACAAAAGGAGAATAGGCACAAGCTAAACCGTGAGCTCTCAATCATAGACAGCAAGGAGGGAAATGAGTCAATTTATGAGGATGAATTCAAAAGAAGATCTGAAATCAAGGCAGAATTGCTTATTTTATCAACCAATGAAGAGATTATGTGGCGCCAAAGATGTAAGCTTAGATGGTTTGTGAAGGGGGGTGTTAATACAACTTTTTTCCACCGAATTGTTGTGGCAAACACAATGAATAGTGCAATAATAGAAATTCTTTCAGCAAACAGCGACAACTTGCTTAATGATGAAGACATTGAAAAGGAATTCATTGATTTTTTCCAAAAGCTTTATTCCAAAACAGACAATTGAAGACCTCTTCCTGACATTGAGAATTGGAGTCTCATCTCCCCTTAACAGAATACAATTTTAGAGCTCCCCTTCACAGAAGAGGAAATTTACAGAGTTGTAAATGATCTTGGCACAAACAAGACTCTAGGGCCCGATGGTTTTACTGCCTAATTCTTCAAAAAATCTTGGAACATCCTTAAGGAAGATATAAAAAGGGCGTTCAATGATTTTTTTAAAGAATTGAATCATCAATGCTAGCCTCAATGAGACATACATTTGTCTTATTCCAAAGAAAGTGGGTGCGAAAACAGTGGGAGATTATAGGCCTACAATCCTCACTACTTGCCTTTATAAGATCATTGCTAGAGTCCTCTCGAAAAGATTCAAGAAGTTCCTCCCACACACGATCACTGAATTCCAATCTGCTTTTGTTGAAGAACGTCAAATTATGGGTGCTACCTTGATAGTTAACGAAATCATCAATGAGTGGAATAGAAGGAAAAAAAGGGTGTTGTTATTGTTGGGTTTTGGCCCTAAAACTCGTAGATAGTAAATGTACATTTGACCGAACATTAATAAAAGTGATGTATTATTCAATGTTTGTATTATATCTTGTCTTATTAACCCTAATCCAATAAACTAAACATCCAAGGCTAATAGAATGAGGCTTGAACTAGTATGTAGGCCATACGGGGATCGATGTTCAAGTTTTAGCCTAAAGGGTCTGTAGTATAGGGATAAGGCTGGATACCTTATCCTGGTGACACTATGGATACGACCCGCTTTGTATTTTGATACAAACGCAATGATCCAATGCGTTCGTGTAGTTGACATGCGAGTGGGGGTATCCTGTGCAATGAGTTTCACAAAGGCCGGACCGCGAAATAGTTGACCACTGACTGTAACTCCGTTAGTTAGCTTGGTTTCTATTTCACTAGGATGACCTAGGCAACTTGGCCTTAATCCTGAGTGGATTATGGACTCCTGTCCATAAGGGATTGTCCTTTGATTTGTACGGGTGAGAGTGGCCTGCACGCCGACTCAATAAGCCTACCATTTTGGGGACAATACTGAGTGGGGAGCTGGGAACATAGTTTTACAAGATGGAATTCACTCCTTCCCAGCTTTAGGGTAAGTAGAGGTGTGTTCCCTTAAGTGGTGTCTCTGGGTCTTGAACAATGGGCCCTACCCTCTCTATGGCACGAGAGGGACTTCTGTTTGCTGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGACAAAGAGGTAGCTCAGGGGTAAAACGGTAATTTGACCTAGCTGGGGTACGAACACACGTGAAGGGCTAACTTGCTGTTGATGGTCGATATCCGTGGACACAGAATTATATCTGCAGTGAGAAGAGTGCAGCTGTGGTTCTATAGTGGAGTGAACCACAGTTAACGAATATTGATTAACTTGGTTAATGAGTTTAACCAATTAATCTCATATCGTTGGAGCTTCTGATCTGTAGGTCCATCAGGTCCCATCGGTAGCTCTATAAGGGCGTTAAGGTAAATTTCTAAGGGTGAATTGAATATTCAAAGGAGTTTGAATATTAAGTTAAATATGAATTTGATTCGTATTAAAAACTATAGGTTATAATTAATGCACATATGATGTACATTAAAACTATAGTTTATTTGGAGAGAGATATAATTAAATATGAGATATTTAATTTTAATATTAATTAATATATTAATTACTTATTATATTAATTAATAATTAGTTTTAATTACTTTAATTAAATTTGATTTAATTAAATTTTATTAAAACAATAGGTTATGTGGAATTATTATAAAGGGTTTATATGATTCTTAAATTAATTGTTAATTTAATTAATTAAATTAATTTAATATTATTATTAAATTAATTATTCCATCAGTTAAAGTAACTGATGGAATTGTTCGTCCACTAACGTAGGTCTCACGCTTGATAGGGAGAGATTTTAGGGAGTGGTGGTTTTCATCCGTTGAATAACCACTCCCTCAATATAATCTTTTTTGGTTCAGTTGGTTACATCGATCAAGCACTCACGAAAAGCTCTCGCTCTCTCCAACTCTCAAGAACTCTCTGTGATTATTCTCTCAAGGATACAGAGAAGAAAAATACTCCTAACCCTTAGAAAATCACGCTCCCACAAGCCCCTAACGCACATCCTTGAAGAGAATACTGGTGCAATCTTTGGTGGTGGTGTTCGTGATAATTTTCCAGCGAGATCAAGACTTTTTCGCTACTGGAATTTTCTGCAAATAGTAAGGGAAAAGGCGAAACGGATCAAGATCGTCTACAAAGGTATAGCGTTCTTGATCTTGGATCAATTGGATCCAATTTAG

mRNA sequence

ATGGAAAAAATTCCCAAACCAAATAGTACAAAACAAAATGCCTCCAACACCCAATTTGTAGCCCTGTATTTAGACTCAGTCGTCATTGTGCAGAGGAAACATTTCCATGACAGTTGGAATGATATCATGCAAGCCTTTCAACAATCCCTCTCGGCTTATTCCTCGATCAGCCCCCTACAGCCAGACAAAGCCCTTCTCTCTTGCGAAGACAAGGAACAAGCCAGCGTACTAGCAAATATTAAAGGGTGGTGCAAGGTTGGAAGATACCAAGTTTGTTTTCTCCCATGGAGTTCGGAAGCCATGAATGGTGACCAAAAGGTGTCGTCATTCGGGGGCTGGATTAAAGTTCGAAATCTTCCTCTCGATAAATGGAATCTTCAAAACTTCAAAAAGATAGGAGATGAGTGTGGTGGGTATATGGAAACAGCAAGCAAAACCCTATCTAGAATGGACATGATGGAGATAGGGAAAGATAAAGGAAAATCACACGGGGTTTATTCCGGTCGAAATCACTCTCCTATATCACACCAACCCAGGGACTATCAGCAGGCCATCTCCCCGCCGACCATTACCAACCTCTTTGACACACTTGATGAACAACCTCACCCTGATAGCCCCATCCCGCTGCGGATTGAAGACCCGAATGACACAGAAAAGGAGCAGAGATTGTGTGTTGAAACATCAGCCCTAGTTGATATAAGTGTGGGAGAAATACAAGAGGAGGATTCAGAATCAGAGTTTCCATATCAGGCAAGCGATCCTGCGGTTTTCTTGCCAGTTCTTTTCCCTTGGCTGGCTAAACATGCTTTAGTGATTCTTCAAGAGACGAAGCTCTCAACCATCAATAGAATAATTGTGAAATCGGTTTGGAGCTCGAGGAATATTACCTGGGCTTCGGTTGATGCTATTGGTGCCTCGGGAGGGATTGTAATCCTGTGGAATGAATCCACCTTTGATGTTCTCGAGATTTTCGAAGGTATTTTCTCTTTATCTATCCATCTCTCGCTTGCTGATGGTTTTTCCTTTTGGATCACAGGAGTATATGGCCCCAATTTTTCACGTGAGAGAAAATCATTTTGGAAGGAATTATCTGATTTGCAAGCCATATGCCTTCCAAACTGGATTATGGGGGGAGATTACAATATTACTAGATGGACTATGGAAAAATCAACCTTCCGAGCCCCTACTCGTGGCATGAAAAAATTCAATAGATTTATTGAAGATGCTGCTTTACAGGACATCCATTTATCCAACGACAAATACATTTGGTCTAGTTGTCGCCCAAACCTCAGCATGACTCTCATTGACCGGTTTTTTATATCAGAAAATATTGCTTCCAAATTCGATTCTGTAAATGCTATAAGACTTGACAGAGTTACTTCGGATCACTCCCCTATATGCCTCATGTTAGGAAAAGAAAAGTGGGGCCCCTCTCCCTTTCGCCTTATAAATGCTTGGTTATCTAACAACTCCTTTTTTAGTACAGTCGACTCTTGGTGGAAGGACAACACATCTCATGACAGCAAGGAGGGAAATGAGTCAATTTATGAGGATGAATTCAAAAGAAGATCTGAAATCAAGGCAGAATTGCTTATTTTATCAACCAATGAAGAGATTATGTGGCGCCAAAGATGTCCATCAGGTCCCATCGGTAGCTCTATAAGGGCGTTAAGGATACAGAGAAGAAAAATACTCCTAACCCTTAGAAAATCACGCTCCCACAAGCCCCTAACGCACATCCTTGAAGAGAATACTGGTGCAATCTTTGGTGGTGGTGTTCGTGATAATTTTCCAGCGAGATCAAGACTTTTTCGCTACTGGAATTTTCTGCAAATAGTAAGGGAAAAGGCGAAACGGATCAAGATCGTCTACAAAGGTATAGCGTTCTTGATCTTGGATCAATTGGATCCAATTTAG

Coding sequence (CDS)

ATGGAAAAAATTCCCAAACCAAATAGTACAAAACAAAATGCCTCCAACACCCAATTTGTAGCCCTGTATTTAGACTCAGTCGTCATTGTGCAGAGGAAACATTTCCATGACAGTTGGAATGATATCATGCAAGCCTTTCAACAATCCCTCTCGGCTTATTCCTCGATCAGCCCCCTACAGCCAGACAAAGCCCTTCTCTCTTGCGAAGACAAGGAACAAGCCAGCGTACTAGCAAATATTAAAGGGTGGTGCAAGGTTGGAAGATACCAAGTTTGTTTTCTCCCATGGAGTTCGGAAGCCATGAATGGTGACCAAAAGGTGTCGTCATTCGGGGGCTGGATTAAAGTTCGAAATCTTCCTCTCGATAAATGGAATCTTCAAAACTTCAAAAAGATAGGAGATGAGTGTGGTGGGTATATGGAAACAGCAAGCAAAACCCTATCTAGAATGGACATGATGGAGATAGGGAAAGATAAAGGAAAATCACACGGGGTTTATTCCGGTCGAAATCACTCTCCTATATCACACCAACCCAGGGACTATCAGCAGGCCATCTCCCCGCCGACCATTACCAACCTCTTTGACACACTTGATGAACAACCTCACCCTGATAGCCCCATCCCGCTGCGGATTGAAGACCCGAATGACACAGAAAAGGAGCAGAGATTGTGTGTTGAAACATCAGCCCTAGTTGATATAAGTGTGGGAGAAATACAAGAGGAGGATTCAGAATCAGAGTTTCCATATCAGGCAAGCGATCCTGCGGTTTTCTTGCCAGTTCTTTTCCCTTGGCTGGCTAAACATGCTTTAGTGATTCTTCAAGAGACGAAGCTCTCAACCATCAATAGAATAATTGTGAAATCGGTTTGGAGCTCGAGGAATATTACCTGGGCTTCGGTTGATGCTATTGGTGCCTCGGGAGGGATTGTAATCCTGTGGAATGAATCCACCTTTGATGTTCTCGAGATTTTCGAAGGTATTTTCTCTTTATCTATCCATCTCTCGCTTGCTGATGGTTTTTCCTTTTGGATCACAGGAGTATATGGCCCCAATTTTTCACGTGAGAGAAAATCATTTTGGAAGGAATTATCTGATTTGCAAGCCATATGCCTTCCAAACTGGATTATGGGGGGAGATTACAATATTACTAGATGGACTATGGAAAAATCAACCTTCCGAGCCCCTACTCGTGGCATGAAAAAATTCAATAGATTTATTGAAGATGCTGCTTTACAGGACATCCATTTATCCAACGACAAATACATTTGGTCTAGTTGTCGCCCAAACCTCAGCATGACTCTCATTGACCGGTTTTTTATATCAGAAAATATTGCTTCCAAATTCGATTCTGTAAATGCTATAAGACTTGACAGAGTTACTTCGGATCACTCCCCTATATGCCTCATGTTAGGAAAAGAAAAGTGGGGCCCCTCTCCCTTTCGCCTTATAAATGCTTGGTTATCTAACAACTCCTTTTTTAGTACAGTCGACTCTTGGTGGAAGGACAACACATCTCATGACAGCAAGGAGGGAAATGAGTCAATTTATGAGGATGAATTCAAAAGAAGATCTGAAATCAAGGCAGAATTGCTTATTTTATCAACCAATGAAGAGATTATGTGGCGCCAAAGATGTCCATCAGGTCCCATCGGTAGCTCTATAAGGGCGTTAAGGATACAGAGAAGAAAAATACTCCTAACCCTTAGAAAATCACGCTCCCACAAGCCCCTAACGCACATCCTTGAAGAGAATACTGGTGCAATCTTTGGTGGTGGTGTTCGTGATAATTTTCCAGCGAGATCAAGACTTTTTCGCTACTGGAATTTTCTGCAAATAGTAAGGGAAAAGGCGAAACGGATCAAGATCGTCTACAAAGGTATAGCGTTCTTGATCTTGGATCAATTGGATCCAATTTAG

Protein sequence

MEKIPKPNSTKQNASNTQFVALYLDSVVIVQRKHFHDSWNDIMQAFQQSLSAYSSISPLQPDKALLSCEDKEQASVLANIKGWCKVGRYQVCFLPWSSEAMNGDQKVSSFGGWIKVRNLPLDKWNLQNFKKIGDECGGYMETASKTLSRMDMMEIGKDKGKSHGVYSGRNHSPISHQPRDYQQAISPPTITNLFDTLDEQPHPDSPIPLRIEDPNDTEKEQRLCVETSALVDISVGEIQEEDSESEFPYQASDPAVFLPVLFPWLAKHALVILQETKLSTINRIIVKSVWSSRNITWASVDAIGASGGIVILWNESTFDVLEIFEGIFSLSIHLSLADGFSFWITGVYGPNFSRERKSFWKELSDLQAICLPNWIMGGDYNITRWTMEKSTFRAPTRGMKKFNRFIEDAALQDIHLSNDKYIWSSCRPNLSMTLIDRFFISENIASKFDSVNAIRLDRVTSDHSPICLMLGKEKWGPSPFRLINAWLSNNSFFSTVDSWWKDNTSHDSKEGNESIYEDEFKRRSEIKAELLILSTNEEIMWRQRCPSGPIGSSIRALRIQRRKILLTLRKSRSHKPLTHILEENTGAIFGGGVRDNFPARSRLFRYWNFLQIVREKAKRIKIVYKGIAFLILDQLDPI

Homology

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BLAST of Spg017970 vs. NCBI nr
Match: XP_022158956.1 (uncharacterized protein LOC111025405 [Momordica charantia])

HSP 1 Score: 239.2 bits (609), Expect = 9.8e-59
Identity = 122/319 (38.24%), Postives = 178/319 (55.80%), Query Frame = 0


Query: 270 LVILQETKLSTINRIIVKSVWSSRNITWASVDAIGASGGIVILWNESTFDVLEIFEGIFS 329
           +VILQETKLS ++ +IVKS+WS+  I W+++DA G + GI+ILWN+      E+ EG+FS
Sbjct: 31  VVILQETKLSYMDILIVKSLWSAHGINWSALDASGMASGILILWNDPDLKAAEMIEGVFS 90

Query: 330 LSIHLSLADGFSFWITGVYGPNFSRERKSFWKELSDLQAICLPNWIMGGDYNITRWTMEK 389
           L+I+  L+DGF FW++G+YGP+ +     FW+EL DL  +C  +WI+ GD+N+TRW+ EK
Sbjct: 91  LTINFCLSDGFLFWVSGIYGPSTTEFHYLFWQELLDLSDLCENHWILAGDFNVTRWSWEK 150

Query: 390 STFRAPTRGMKKFNRFIEDAALQDIHLSNDKYIWSSCRPNLSMTLIDRFFISENIASKFD 449
           S  R  T+ M  FN FIED++L D+ L+N ++ WS    N S +LID F ++     K  
Sbjct: 151 SNGRPLTKSMWLFNSFIEDSSLIDVPLTNGQHTWSR---NTSFSLIDCFLLTNGCIDKLG 210

Query: 450 SVNAIRLDRVTSDHSPICLMLGKEKWGPSPFRLINAWLSNNSFFSTVDSWWKDNTSH--- 509
              A R+ R TSDH PI L  G+  WG +PFR  N WLS+ +F   +++WW +   H   
Sbjct: 211 MPIAKRMTRTTSDHFPILLDFGQNNWGLTPFRFENMWLSHKTFKPFLETWWGNKPLHGWP 270

Query: 510 ----------------------------------------DSKEGNESIYEDEFKRRSEI 546
                                                   D  EG++ +  D+ + R + 
Sbjct: 271 GHGLMMKLKSLKYAIKLWITEHFRCIHSQKEDLTNLMNSLDDLEGSQPVTPDQSRARIQA 330

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BLAST of Spg017970 vs. NCBI nr
Match: XP_022145142.1 (uncharacterized protein LOC111014657 [Momordica charantia])

HSP 1 Score: 231.9 bits (590), Expect = 1.6e-56
Identity = 107/236 (45.34%), Postives = 154/236 (65.25%), Query Frame = 0


Query: 270 LVILQETKLSTINRIIVKSVWSSRNITWASVDAIGASGGIVILWNESTFDVLEIFEGIFS 329
           +VIL ETK S+IN   +KS+WSS +I WAS+DA GASGGI++LW++ +   +E+  G FS
Sbjct: 31  IVILSETKSSSINNKFIKSLWSSISIAWASLDASGASGGIILLWDQLSTSAVEVICGHFS 90

Query: 330 LSIHLSLADGFSFWITGVYGPNFSRERKSFWKELSDLQAICLPNWIMGGDYNITRWTMEK 389
           +S+H  LAD F++W+TGVY P   ++RK FW+EL DL  +C P W++G D+NI RW+ E 
Sbjct: 91  ISVHFKLADNFTWWLTGVYSPVKQKKRKLFWQELFDLNGLCGPIWLLGEDFNIYRWSHET 150

Query: 390 STFRAPTRGMKKFNRFIEDAALQDIHLSNDKYIWSSCRPNLSMTLIDRFFISENIASKFD 449
           S+   P  GM KFN FI+ A L D  ++N +Y WS+ RP++ ++ I+RF  S+  + KF 
Sbjct: 151 SSANPPQTGMNKFNHFIDFAGLIDPFMNNGQYTWSNLRPHIVLSRINRFLYSKGWSDKFS 210

Query: 450 SVNAIRLDRVTSDHSPICLMLGKEKWGPSPFRLINAWLSNNSFFSTVDSWWKDNTS 506
             +  RL R  SDH PI L    ++WG  PFRL N WL +  F   +++ W   +S
Sbjct: 211 HHHIKRLPRACSDHYPILLEPPNQQWGHCPFRLENLWLQDKHFQQHIEAIWSSGSS 266

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BLAST of Spg017970 vs. NCBI nr
Match: VVA20479.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 200.3 bits (508), Expect = 5.0e-47
Identity = 96/237 (40.51%), Postives = 136/237 (57.38%), Query Frame = 0


Query: 267 KHALVILQETKLSTINRIIVKSVWSSRNITWASVDAIGASGGIVILWNESTFDVLEIFEG 326
           K  +VIL ETK   ++R +V  VW SR   W    ++G SGGI +LWN  +  V++   G
Sbjct: 35  KPDIVILLETKKEIVDRQLVTGVWGSRFKEWVFSPSLGRSGGIAVLWNSQSVSVIDSMVG 94

Query: 327 IFSLSIHLSLADGFSFWITGVYGPNFSRERKSFWKELSDLQAICLPNWIMGGDYNITRWT 386
            FS+SI +    G  +W++G+YGP   RER SFW+EL+DL   C   W +GGD+N+ R++
Sbjct: 95  DFSVSIRIVENIGTDWWLSGIYGPCRQRERISFWEELADLYGYCGDKWCLGGDFNVVRFS 154

Query: 387 MEKSTFRAPTRGMKKFNRFIEDAALQDIHLSNDKYIWSSCRPNLSMTLIDRFFISENIAS 446
            EKS     T+ M+ FN FI++  L+D +L N  + WS+ R N     +DRF +S +   
Sbjct: 155 AEKSNEGRVTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWED 214

Query: 447 KFDSVNAIRLDRVTSDHSPICLMLGKEKWGPSPFRLINAWLSNNSFFSTVDSWWKDN 504
            F       L R+TSDH PI L   + KWGPSPFR  N WL +  F   +  WW ++
Sbjct: 215 HFPHYRHKALPRITSDHCPIELDTSRVKWGPSPFRFENMWLKHPDFKRKIKLWWDED 271

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BLAST of Spg017970 vs. NCBI nr
Match: BBH07150.1 (TatD related DNase [Prunus dulcis])

HSP 1 Score: 200.3 bits (508), Expect = 5.0e-47
Identity = 96/237 (40.51%), Postives = 136/237 (57.38%), Query Frame = 0


Query: 267 KHALVILQETKLSTINRIIVKSVWSSRNITWASVDAIGASGGIVILWNESTFDVLEIFEG 326
           K  +VIL ETK   ++R +V  VW SR   W    ++G SGGI +LWN  +  V++   G
Sbjct: 16  KPDIVILLETKKEIVDRQLVTGVWGSRFKEWVFSPSLGRSGGIAVLWNSQSVSVIDSMVG 75

Query: 327 IFSLSIHLSLADGFSFWITGVYGPNFSRERKSFWKELSDLQAICLPNWIMGGDYNITRWT 386
            FS+SI +    G  +W++G+YGP   RER SFW+EL+DL   C   W +GGD+N+ R++
Sbjct: 76  EFSVSIRIVENIGTDWWLSGIYGPCRQRERISFWEELADLYGYCGDKWCLGGDFNVVRFS 135

Query: 387 MEKSTFRAPTRGMKKFNRFIEDAALQDIHLSNDKYIWSSCRPNLSMTLIDRFFISENIAS 446
            EKS     T+ M+ FN FI++  L+D +L N  + WS+ R N     +DRF +S +   
Sbjct: 136 AEKSNEGRVTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWED 195

Query: 447 KFDSVNAIRLDRVTSDHSPICLMLGKEKWGPSPFRLINAWLSNNSFFSTVDSWWKDN 504
            F       L R+TSDH PI L   + KWGPSPFR  N WL +  F   +  WW ++
Sbjct: 196 HFPHYRHKALPRITSDHCPIELDTSRVKWGPSPFRFENMWLKHPDFKRKIKLWWDED 252

[Close]

BLAST of Spg017970 vs. NCBI nr
Match: CAN83725.1 (hypothetical protein VITISV_037053 [Vitis vinifera])

HSP 1 Score: 195.7 bits (496), Expect = 1.2e-45
Identity = 106/275 (38.55%), Postives = 149/275 (54.18%), Query Frame = 0


Query: 270  LVILQETKLSTINRIIVKSVWSSRNITWASVDAIGASGGIVILWNESTFDVLEIFEGIFS 329
            +V+LQETK    +R  V SVW  +++ W ++ A GASGGIVILW+   F   E   G FS
Sbjct: 754  VVMLQETKREIWDRRXVSSVWKGKSLDWVALPACGASGGIVILWDSXKFXCSEKVLGXFS 813

Query: 330  LSIHLSLADGFSFWITGVYGPNFSRERKSFWKELSDLQAICLPNWIMGGDYNITRWTMEK 389
            +++ L+  +   FW+T VYGPN +  RK FW EL DL  +  P W +GGD+N+ +   E+
Sbjct: 814  VTVKLNSXEEGFFWLTSVYGPNKAVXRKDFWMELQDLHGLTSPRWCVGGDFNVIKRMSER 873

Query: 390  STFRAPTRGMKKFNRFIEDAALQDIHLSNDKYIWSSCRPNLSMTLIDRFFISENIASKFD 449
                  T  M+ F+ FI+++ L D  L N  + WS+ + +     +DRF  S    S F 
Sbjct: 874  MGDSRLTVNMRCFDEFIKESGLLDPPLRNAAFTWSNMQVDPICKRLDRFLFSSEWDSFFS 933

Query: 450  SVNAIRLDRVTSDHSPICLMLGKEKWGPSPFRLINAWLSNNSFFSTVDSWWKDNTSHDSK 509
                  L R TSDHS ICL     KWGP+PFR  N WL +  F      WW++ T    +
Sbjct: 934  QSIQEALPRWTSDHSLICLETNPLKWGPTPFRFENMWLLHPEFKEKFRDWWQECTVEGWE 993

Query: 510  EGNESIYEDEFKRRSEIKAELLILSTNEEIMWRQR 545
            EGN ++  D    R+  + EL  L   EE+ WRQ+
Sbjct: 994  EGNLNL--DLVSERTLRRKELEDLLLKEEVQWRQK 1026

[Close]

BLAST of Spg017970 vs. ExPASy TrEMBL
Match: A0A6J1E2G6 (uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025405 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.7e-59
Identity = 122/319 (38.24%), Postives = 178/319 (55.80%), Query Frame = 0


Query: 270 LVILQETKLSTINRIIVKSVWSSRNITWASVDAIGASGGIVILWNESTFDVLEIFEGIFS 329
           +VILQETKLS ++ +IVKS+WS+  I W+++DA G + GI+ILWN+      E+ EG+FS
Sbjct: 31  VVILQETKLSYMDILIVKSLWSAHGINWSALDASGMASGILILWNDPDLKAAEMIEGVFS 90

Query: 330 LSIHLSLADGFSFWITGVYGPNFSRERKSFWKELSDLQAICLPNWIMGGDYNITRWTMEK 389
           L+I+  L+DGF FW++G+YGP+ +     FW+EL DL  +C  +WI+ GD+N+TRW+ EK
Sbjct: 91  LTINFCLSDGFLFWVSGIYGPSTTEFHYLFWQELLDLSDLCENHWILAGDFNVTRWSWEK 150

Query: 390 STFRAPTRGMKKFNRFIEDAALQDIHLSNDKYIWSSCRPNLSMTLIDRFFISENIASKFD 449
           S  R  T+ M  FN FIED++L D+ L+N ++ WS    N S +LID F ++     K  
Sbjct: 151 SNGRPLTKSMWLFNSFIEDSSLIDVPLTNGQHTWSR---NTSFSLIDCFLLTNGCIDKLG 210

Query: 450 SVNAIRLDRVTSDHSPICLMLGKEKWGPSPFRLINAWLSNNSFFSTVDSWWKDNTSH--- 509
              A R+ R TSDH PI L  G+  WG +PFR  N WLS+ +F   +++WW +   H   
Sbjct: 211 MPIAKRMTRTTSDHFPILLDFGQNNWGLTPFRFENMWLSHKTFKPFLETWWGNKPLHGWP 270

Query: 510 ----------------------------------------DSKEGNESIYEDEFKRRSEI 546
                                                   D  EG++ +  D+ + R + 
Sbjct: 271 GHGLMMKLKSLKYAIKLWITEHFRCIHSQKEDLTNLMNSLDDLEGSQPVTPDQSRARIQA 330

[Close]

BLAST of Spg017970 vs. ExPASy TrEMBL
Match: A0A6J1CVN2 (uncharacterized protein LOC111014657 OS=Momordica charantia OX=3673 GN=LOC111014657 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.6e-57
Identity = 107/236 (45.34%), Postives = 154/236 (65.25%), Query Frame = 0


Query: 270 LVILQETKLSTINRIIVKSVWSSRNITWASVDAIGASGGIVILWNESTFDVLEIFEGIFS 329
           +VIL ETK S+IN   +KS+WSS +I WAS+DA GASGGI++LW++ +   +E+  G FS
Sbjct: 31  IVILSETKSSSINNKFIKSLWSSISIAWASLDASGASGGIILLWDQLSTSAVEVICGHFS 90

Query: 330 LSIHLSLADGFSFWITGVYGPNFSRERKSFWKELSDLQAICLPNWIMGGDYNITRWTMEK 389
           +S+H  LAD F++W+TGVY P   ++RK FW+EL DL  +C P W++G D+NI RW+ E 
Sbjct: 91  ISVHFKLADNFTWWLTGVYSPVKQKKRKLFWQELFDLNGLCGPIWLLGEDFNIYRWSHET 150

Query: 390 STFRAPTRGMKKFNRFIEDAALQDIHLSNDKYIWSSCRPNLSMTLIDRFFISENIASKFD 449
           S+   P  GM KFN FI+ A L D  ++N +Y WS+ RP++ ++ I+RF  S+  + KF 
Sbjct: 151 SSANPPQTGMNKFNHFIDFAGLIDPFMNNGQYTWSNLRPHIVLSRINRFLYSKGWSDKFS 210

Query: 450 SVNAIRLDRVTSDHSPICLMLGKEKWGPSPFRLINAWLSNNSFFSTVDSWWKDNTS 506
             +  RL R  SDH PI L    ++WG  PFRL N WL +  F   +++ W   +S
Sbjct: 211 HHHIKRLPRACSDHYPILLEPPNQQWGHCPFRLENLWLQDKHFQQHIEAIWSSGSS 266

[Close]

BLAST of Spg017970 vs. ExPASy TrEMBL
Match: M5VS59 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016504mg PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 7.6e-49
Identity = 97/237 (40.93%), Postives = 138/237 (58.23%), Query Frame = 0


Query: 267 KHALVILQETKLSTINRIIVKSVWSSRNITWASVDAIGASGGIVILWNESTFDVLEIFEG 326
           K  +VIL ETK  T++R +V  VW SR   W    ++G SGGI +LWN  +  V++   G
Sbjct: 14  KPDIVILLETKKETVDRQLVAGVWGSRFKEWVFSPSLGRSGGIAVLWNSQSVSVIDSMVG 73

Query: 327 IFSLSIHLSLADGFSFWITGVYGPNFSRERKSFWKELSDLQAICLPNWIMGGDYNITRWT 386
            FS+SI +    G  +W++G+YGP   RER SFW+EL+DL   C   W +GGD+N+ R++
Sbjct: 74  EFSVSIRIVENIGTDWWLSGIYGPCRQRERNSFWEELADLYGFCGDKWCLGGDFNVVRFS 133

Query: 387 MEKSTFRAPTRGMKKFNRFIEDAALQDIHLSNDKYIWSSCRPNLSMTLIDRFFISENIAS 446
            EKS     T+ M+ FN FI++  L+D +L N  + WS+ R N     +DRF +S +   
Sbjct: 134 AEKSNEGRVTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWED 193

Query: 447 KFDSVNAIRLDRVTSDHSPICLMLGKEKWGPSPFRLINAWLSNNSFFSTVDSWWKDN 504
            F       L R+TSDH PI L   + KWGPSPFR  N WL++  F   +  WW ++
Sbjct: 194 HFPHYRHKALPRITSDHCPIELDTSRVKWGPSPFRFENMWLNHPDFMRKIKLWWGED 250

[Close]

BLAST of Spg017970 vs. ExPASy TrEMBL
Match: A0A4Y1RS61 (TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_019005 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-47
Identity = 96/237 (40.51%), Postives = 136/237 (57.38%), Query Frame = 0


Query: 267 KHALVILQETKLSTINRIIVKSVWSSRNITWASVDAIGASGGIVILWNESTFDVLEIFEG 326
           K  +VIL ETK   ++R +V  VW SR   W    ++G SGGI +LWN  +  V++   G
Sbjct: 16  KPDIVILLETKKEIVDRQLVTGVWGSRFKEWVFSPSLGRSGGIAVLWNSQSVSVIDSMVG 75

Query: 327 IFSLSIHLSLADGFSFWITGVYGPNFSRERKSFWKELSDLQAICLPNWIMGGDYNITRWT 386
            FS+SI +    G  +W++G+YGP   RER SFW+EL+DL   C   W +GGD+N+ R++
Sbjct: 76  EFSVSIRIVENIGTDWWLSGIYGPCRQRERISFWEELADLYGYCGDKWCLGGDFNVVRFS 135

Query: 387 MEKSTFRAPTRGMKKFNRFIEDAALQDIHLSNDKYIWSSCRPNLSMTLIDRFFISENIAS 446
            EKS     T+ M+ FN FI++  L+D +L N  + WS+ R N     +DRF +S +   
Sbjct: 136 AEKSNEGRVTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWED 195

Query: 447 KFDSVNAIRLDRVTSDHSPICLMLGKEKWGPSPFRLINAWLSNNSFFSTVDSWWKDN 504
            F       L R+TSDH PI L   + KWGPSPFR  N WL +  F   +  WW ++
Sbjct: 196 HFPHYRHKALPRITSDHCPIELDTSRVKWGPSPFRFENMWLKHPDFKRKIKLWWDED 252

[Close]

BLAST of Spg017970 vs. ExPASy TrEMBL
Match: A0A5E4F090 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035017 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-47
Identity = 96/237 (40.51%), Postives = 136/237 (57.38%), Query Frame = 0


Query: 267 KHALVILQETKLSTINRIIVKSVWSSRNITWASVDAIGASGGIVILWNESTFDVLEIFEG 326
           K  +VIL ETK   ++R +V  VW SR   W    ++G SGGI +LWN  +  V++   G
Sbjct: 35  KPDIVILLETKKEIVDRQLVTGVWGSRFKEWVFSPSLGRSGGIAVLWNSQSVSVIDSMVG 94

Query: 327 IFSLSIHLSLADGFSFWITGVYGPNFSRERKSFWKELSDLQAICLPNWIMGGDYNITRWT 386
            FS+SI +    G  +W++G+YGP   RER SFW+EL+DL   C   W +GGD+N+ R++
Sbjct: 95  DFSVSIRIVENIGTDWWLSGIYGPCRQRERISFWEELADLYGYCGDKWCLGGDFNVVRFS 154

Query: 387 MEKSTFRAPTRGMKKFNRFIEDAALQDIHLSNDKYIWSSCRPNLSMTLIDRFFISENIAS 446
            EKS     T+ M+ FN FI++  L+D +L N  + WS+ R N     +DRF +S +   
Sbjct: 155 AEKSNEGRVTKSMRDFNDFIQETNLRDPNLLNASFTWSNLRENAVCRRLDRFLVSGSWED 214

Query: 447 KFDSVNAIRLDRVTSDHSPICLMLGKEKWGPSPFRLINAWLSNNSFFSTVDSWWKDN 504
            F       L R+TSDH PI L   + KWGPSPFR  N WL +  F   +  WW ++
Sbjct: 215 HFPHYRHKALPRITSDHCPIELDTSRVKWGPSPFRFENMWLKHPDFKRKIKLWWDED 271

The following BLAST results are available for this feature:

BLAST of Spg017970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158956.1	9.8e-59	38.24	uncharacterized protein LOC111025405 [Momordica charantia]	[more]
XP_022145142.1	1.6e-56	45.34	uncharacterized protein LOC111014657 [Momordica charantia]	[more]
VVA20479.1	5.0e-47	40.51	Hypothetical predicted protein, partial [Prunus dulcis]	[more]
BBH07150.1	5.0e-47	40.51	TatD related DNase [Prunus dulcis]	[more]
CAN83725.1	1.2e-45	38.55	hypothetical protein VITISV_037053 [Vitis vinifera]	[more]

BLAST of Spg017970 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg017970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2G6	4.7e-59	38.24	uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CVN2	7.6e-57	45.34	uncharacterized protein LOC111014657 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
M5VS59	7.6e-49	40.93	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A4Y1RS61	2.4e-47	40.51	TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_019005 PE=4 SV=1	[more]
A0A5E4F090	2.4e-47	40.51	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3...	[more]

BLAST of Spg017970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 53..149 e-value: 7.8E-9 score: 35.2
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 264..470 e-value: 3.2E-25 score: 91.2
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 269..470
None	No IPR available	PANTHER	PTHR33710:SF32	SUBFAMILY NOT NAMED	coord: 328..495
None	No IPR available	PANTHER	PTHR33710	BNAC02G09200D PROTEIN	coord: 328..495

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017970.1	Spg017970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity