Spg017962 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017962
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold9: 30121014 .. 30121919 (+)
RNA-Seq Expression	Spg017962
Synteny	Spg017962

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCACGCCGCCGCCTTCAGCCGCGAATCGCCTCTGCCGATCCGACGCAAGCCACCGCCGCCGCGTGGGTGCGCGCGTTTAGCATTGTTTTCCGGCAGCAACACTGTAGGCGCGGACAACTGCGAGGAGGGACCATTTTTCCGCGTTTTTCGGGTGTTTTAGGTGAGTTCTCGCAGTGGGTAAGTTGGTTGAGGCTTATGTGGGTTAGTTCTTGCATTTAAACAATTACCCACTCACTTCCCTTTCCATTCAGCAGGCGTTTCTCTTCATAATCGACATTCTAGAAGCAGATCTTCAAGTTTCAGCCTCTTTGAGCGAGTTCGTCATTGGGTAAGTGAATTAAGTCAAGTTTTGGAATGATTTATGTGTGTTAGATGAATACCCATTGATATTAGCTTCTAATTTCAAGGTACCCGTGGCGTTTGGAGGTCGAATTGTCGAATTTGAGCAATTTTGGACTGCTGGACAGCAAGCTGTGGTTCTCTTTTGGCTTGCTTAAGAACCTTGGAGTTACGGAATTTCTTGAAGGTTAAGCAAATATCTCCTTCACTAATGTAAGTAGCTGTTGGAATAAATTCTCTGCTTTAAACTCATTTAAATTGAGTATGGTTTACTATAGCATGAGTTGGATTTAAACCTTAAGTTGCCCCTTGGTATGTAAGTAGCTTTTGGATTTTTATCTGCAAGTTTAGTCCCTGTTGCTTGTTATGGGATTTTGATAAACGCCTAGCCTGAGCTTTTGAACTAGTTCTTTGAGGGATTAGCCTGCTAGCATGAGTTAAATTGTGAACCTTGGACTCGTTTTGGATTTCTATGCGGTTAATAGTTATTGCATTGTAAAACACGTTGCGACATGGAGGTTGAGTTTTCTTTAGCATGTCTGATACTGTTTTGGGGTGGAAT

mRNA sequence

ATGTCGCACGCCGCCGCCTTCAGCCGCGAATCGCCTCTGCCGATCCGACGCAAGCCACCGCCGCCGCGTGGGTGCGCGCGTTTAGCATTGTTTTCCGGCAGCAACACTGTAGGCGCGGACAACTGCGAGGAGGGACCATTTTTCCGCGTTTTTCGGGCGTTTCTCTTCATAATCGACATTCTAGAAGCAGATCTTCAAGTTTCAGCCTCTTTGAGCGAGTTCGTCATTGGGTACCCGTGGCGTTTGGAGGTCGAATTGTCGAATTTGAGCAATTTTGGACTGCTGGACAGCAAGCTGTGGTTCTCTTTTGGCTTGCTTAAGAACCTTGGAGTTACGGAATTTCTTGAAGGTTAA

Coding sequence (CDS)

ATGTCGCACGCCGCCGCCTTCAGCCGCGAATCGCCTCTGCCGATCCGACGCAAGCCACCGCCGCCGCGTGGGTGCGCGCGTTTAGCATTGTTTTCCGGCAGCAACACTGTAGGCGCGGACAACTGCGAGGAGGGACCATTTTTCCGCGTTTTTCGGGCGTTTCTCTTCATAATCGACATTCTAGAAGCAGATCTTCAAGTTTCAGCCTCTTTGAGCGAGTTCGTCATTGGGTACCCGTGGCGTTTGGAGGTCGAATTGTCGAATTTGAGCAATTTTGGACTGCTGGACAGCAAGCTGTGGTTCTCTTTTGGCTTGCTTAAGAACCTTGGAGTTACGGAATTTCTTGAAGGTTAA

Protein sequence

MSHAAAFSRESPLPIRRKPPPPRGCARLALFSGSNTVGADNCEEGPFFRVFRAFLFIIDILEADLQVSASLSEFVIGYPWRLEVELSNLSNFGLLDSKLWFSFGLLKNLGVTEFLEG

Homology

The following BLAST results are available for this feature:

BLAST of Spg017962 vs.


Match Name	E-value	Identity	Description

BLAST of Spg017962 vs.


Match Name	E-value	Identity	Description

BLAST of Spg017962 vs.


Match Name	E-value	Identity	Description

BLAST of Spg017962 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017962.1	Spg017962.1	mRNA