Spg017939 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCAGAAACTGCAATCTATCAAAGGTGGTGGAGGGTCTATTAAGGTTGGAGCCACCGGAACGATTAGCTCCCTGATGATGAGGGAGTTAGAGACAATGAGATCCGGCCCCCAGAAGTCGGTAACTTCCAAAAACAGATCTTCATCTGCTACTACTGTTTCATCTGCTGCTTCCGTTCCTAAAAGACTACAACAAAGTAAATCGTTTGATGAGGTAAACACTGGTAGAAGATATAACAGTGTTAATAACAGAAGCTTTGGGAACTCTCATACTGCTACTAAAGCTGGTTCGAGGGATGTTCATCGTATGCCAATGCTTGGTTCTAATGATATTTATACAGATGGAAATAGCTATAGAGAGAAACCAGAAAGGAAAGGACTTAGAGCAGTTGCAATTGTGGATGTAAAGTGCAATAACCCTGATAGAGCTTGGGCTAGCCGCCCTCTATCAAGTCGACTCAGAAAACTCGGTTTTTCAAAGCTATCAGAAACCTTTGCTTGACTCTACAAAACTTTCACCATTTCCTGCACAACATGGCAGACCTATAGGCTGCTTTCTATCTGAATCTTTGTAGTTCTAGGGTTTCAAATGATGTATAGAAGGATCTGCCAGTAATTGGACTAGGGGTGCTGTGAGTCTCATTGGCAGACCCGAAATCGACGATTGGTTGCATTATAGCACATCAAACTCTGCCCTCGGTCCCTTCTTCATCAGGAGACCGCGCTCATTCAAGTGTCTTCTAGGTAATTTAGCTGGATTTATCACCTGCTCGTGCCCCGGTGGGAAGCGATACTGTTTTCTGGTCGTTAGATGTTTTATTTCCTTAATCTAAAGTGAAAGAAAGCTGGCTTGGCTTTTGTTATTTGACATGTTTAGATGGTAATTTGTTCTCTTCCCATGTTTGGCATGTTTGCATCCAAAACTTGTAAGTTGTAATAGTAAAAAATTGTCTTTGCCACTTGGGTCCCTTTTTCATGTGACTATAATTTGTTCTAGTGGACCAACTTATCAAAGTTTCCATTGATAACCTGAAATCTTGATTCACTGTCTCTAATAAGTGCTAAATGATGGTGCTACAAAGGAAGATTCAGTTTCTGATGTGTTCCATCATTAA ATGGTTCAGAAACTGCAATCTATCAAAGGTGGTGGAGGGTCTATTAAGGTTGGAGCCACCGGAACGATTAGCTCCCTGATGATGAGGGAGTTAGAGACAATGAGATCCGGCCCCCAGAAGTCGGTAACTTCCAAAAACAGATCTTCATCTGCTACTACTGTTTCATCTGCTGCTTCCGTTCCTAAAAGACTACAACAAAGTAAATCGTTTGATGAGGTAAACACTGGTAGAAGATATAACAGTGTTAATAACAGAAGCTTTGGGAACTCTCATACTGCTACTAAAGCTGGTTCGAGGGATGTTCATCGTATGCCAATGCTTGGTTCTAATGATATTTATACAGATGGAAATAGCTATAGAGAGAAACCAGAAAGGAAAGGACTTAGAGCAGTTGCAATTGTGGATGTAAAGTGCAATAACCCTGATAGAGCTTGGGCTAGCCGCCCTCTATCAAGTCGACTCAGAAAACTCGAAGGATCTGCCAGTAATTGGACTAGGGGTGCTGTGAGTCTCATTGGCAGACCCGAAATCGACGATTGGTTGCATTATAGCACATCAAACTCTGCCCTCGGTCCCTTCTTCATCAGGAGACCGCGCTCATTCAAGTGTCTTCTAGGTAATTTAGCTGGATTTATCACCTGCTCGTGCCCCGGTGGGAAGCGATACTTGCTAAATGATGGTGCTACAAAGGAAGATTCAGTTTCTGATGTGTTCCATCATTAA ATGGTTCAGAAACTGCAATCTATCAAAGGTGGTGGAGGGTCTATTAAGGTTGGAGCCACCGGAACGATTAGCTCCCTGATGATGAGGGAGTTAGAGACAATGAGATCCGGCCCCCAGAAGTCGGTAACTTCCAAAAACAGATCTTCATCTGCTACTACTGTTTCATCTGCTGCTTCCGTTCCTAAAAGACTACAACAAAGTAAATCGTTTGATGAGGTAAACACTGGTAGAAGATATAACAGTGTTAATAACAGAAGCTTTGGGAACTCTCATACTGCTACTAAAGCTGGTTCGAGGGATGTTCATCGTATGCCAATGCTTGGTTCTAATGATATTTATACAGATGGAAATAGCTATAGAGAGAAACCAGAAAGGAAAGGACTTAGAGCAGTTGCAATTGTGGATGTAAAGTGCAATAACCCTGATAGAGCTTGGGCTAGCCGCCCTCTATCAAGTCGACTCAGAAAACTCGAAGGATCTGCCAGTAATTGGACTAGGGGTGCTGTGAGTCTCATTGGCAGACCCGAAATCGACGATTGGTTGCATTATAGCACATCAAACTCTGCCCTCGGTCCCTTCTTCATCAGGAGACCGCGCTCATTCAAGTGTCTTCTAGGTAATTTAGCTGGATTTATCACCTGCTCGTGCCCCGGTGGGAAGCGATACTTGCTAAATGATGGTGCTACAAAGGAAGATTCAGTTTCTGATGTGTTCCATCATTAA MVQKLQSIKGGGGSIKVGATGTISSLMMRELETMRSGPQKSVTSKNRSSSATTVSSAASVPKRLQQSKSFDEVNTGRRYNSVNNRSFGNSHTATKAGSRDVHRMPMLGSNDIYTDGNSYREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLEGSASNWTRGAVSLIGRPEIDDWLHYSTSNSALGPFFIRRPRSFKCLLGNLAGFITCSCPGGKRYLLNDGATKEDSVSDVFHH Homology
BLAST of Spg017939 vs. NCBI nr
Match: XP_022139743.1 (uncharacterized protein LOC111010581 [Momordica charantia]) HSP 1 Score: 258.1 bits (658), Expect = 7.7e-65 Identity = 138/161 (85.71%), Postives = 146/161 (90.68%), Query Frame = 0
BLAST of Spg017939 vs. NCBI nr
Match: XP_004149171.1 (uncharacterized protein LOC101215948 [Cucumis sativus] >XP_004149172.1 uncharacterized protein LOC101215948 [Cucumis sativus] >XP_004149173.1 uncharacterized protein LOC101215948 [Cucumis sativus] >XP_004149174.1 uncharacterized protein LOC101215948 [Cucumis sativus] >KGN57999.1 hypothetical protein Csa_010222 [Cucumis sativus]) HSP 1 Score: 257.7 bits (657), Expect = 1.0e-64 Identity = 139/160 (86.88%), Postives = 146/160 (91.25%), Query Frame = 0
BLAST of Spg017939 vs. NCBI nr
Match: XP_008454517.1 (PREDICTED: uncharacterized protein LOC103494914 [Cucumis melo] >KAA0053111.1 uncharacterized protein E6C27_scaffold778G00440 [Cucumis melo var. makuwa] >TYJ95486.1 uncharacterized protein E5676_scaffold441G00050 [Cucumis melo var. makuwa]) HSP 1 Score: 256.1 bits (653), Expect = 2.9e-64 Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 0
BLAST of Spg017939 vs. NCBI nr
Match: XP_038899712.1 (uncharacterized protein LOC120086960 [Benincasa hispida] >XP_038899713.1 uncharacterized protein LOC120086960 [Benincasa hispida] >XP_038899714.1 uncharacterized protein LOC120086960 [Benincasa hispida] >XP_038899715.1 uncharacterized protein LOC120086960 [Benincasa hispida] >XP_038899716.1 uncharacterized protein LOC120086960 [Benincasa hispida]) HSP 1 Score: 250.4 bits (638), Expect = 1.6e-62 Identity = 134/157 (85.35%), Postives = 141/157 (89.81%), Query Frame = 0
BLAST of Spg017939 vs. NCBI nr
Match: XP_022976588.1 (uncharacterized protein LOC111476940 [Cucurbita maxima] >XP_022976589.1 uncharacterized protein LOC111476940 [Cucurbita maxima] >XP_022976590.1 uncharacterized protein LOC111476940 [Cucurbita maxima]) HSP 1 Score: 245.4 bits (625), Expect = 5.1e-61 Identity = 137/173 (79.19%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of Spg017939 vs. ExPASy TrEMBL
Match: A0A6J1CGE9 (uncharacterized protein LOC111010581 OS=Momordica charantia OX=3673 GN=LOC111010581 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 3.7e-65 Identity = 138/161 (85.71%), Postives = 146/161 (90.68%), Query Frame = 0
BLAST of Spg017939 vs. ExPASy TrEMBL
Match: A0A0A0LAQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G426360 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 4.9e-65 Identity = 139/160 (86.88%), Postives = 146/160 (91.25%), Query Frame = 0
BLAST of Spg017939 vs. ExPASy TrEMBL
Match: A0A5D3B9E2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold441G00050 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 1.4e-64 Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 0
BLAST of Spg017939 vs. ExPASy TrEMBL
Match: A0A1S3BYW8 (uncharacterized protein LOC103494914 OS=Cucumis melo OX=3656 GN=LOC103494914 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 1.4e-64 Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 0
BLAST of Spg017939 vs. ExPASy TrEMBL
Match: A0A6J1INY9 (uncharacterized protein LOC111476940 OS=Cucurbita maxima OX=3661 GN=LOC111476940 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 2.5e-61 Identity = 137/173 (79.19%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of Spg017939 vs. TAIR 10
Match: AT5G54850.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 102.8 bits (255), Expect = 3.8e-22 Identity = 74/203 (36.45%), Postives = 112/203 (55.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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