Spg017912 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg017912
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionheavy metal-associated isoprenylated plant protein 28-like isoform X2
Locationscaffold9: 35496256 .. 35497323 (-)
RNA-Seq ExpressionSpg017912
SyntenySpg017912
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAAAGCAAAAGAAGATTCTGAAGGCAGTGCGGCAGAGCTATGGCCATACCCTTATAACCCACAATACCATGGCTTCATCTTCCATTACCAACATTACCTCTTAAATCTCCTCAGCACCATGACCATCAGCCTCAGCCTCAAACTAAACCAGTCATCACCTACAATTCACTGTCTTCTTCTTCTCACAAGCACAAGCATATGGCTCATGAGTATAATAGCTACAGCGGAGGCCGTGGAGGAGGATTCACTGCGGACTATGGCTATTATAAAGAGCCACCCTTATCAACGATTGATGAAGAAGCTGGTGCCATGTTCAGTGATGAGAACCCCCATTCCTGTGCTATTTTGTGAATCCAGGCATCATTTCTCTCTCTTGTAATTGAATGCGTATATGTACCGTATATGATGTGTATGTATATACGTATGTACAAATATGTGTAAATGAGCGAGGGATGTGTTTAAATATTCTCTAGTGCAATGTTCTGCACACTTGTGAAAATTTTTGGTCAACGGTGTGTTTGAGGTTGTTTTTGTCGATATTGGAGTGTTTTGAACTGAAAAAAAAATGATGCTAGAATGGGTTTGTACTTTGTAATGCAATGCAGATTAGTAGGCAGGCAGTGGCCGCTGAAAAAGAGGTTGATACTTTATTCACCTCTCAAGTGCTATTATGTGGCGGCTAAAATGGTGTGAGGTTGATTACTAGATCTCGCACCTCTCTTCCTCTCTATAAATATATGGCATTGGCGCCTTTGGCTATTGCTACAACCCCATTTTTGGCACAGTCAAAGAAGCGGTTCTTCTCCCTCTTATATAGCTTTCAACGAGTGGATCTTCCTTTAGTTACTATATCTACATCATAAACGACATCTCCAGGCATCGAGGACAAGGGAGTTGTAGATCAAAGGTGGAGCTCATTCATCAGACACACCACGACCAGATTGAACACCTTGAGATCAACTACTCGAACTCTTCTATACCCGCTATTGATTCACTGACCGATTCAGTAGGGAGCGAAGCCTCCTACAGTGAGAGTGGAGAGACCAACTTGGAGTTTCCTTAG

mRNA sequence

ATGGGCAAAGCAAAAGAAGATTCTGAAGGCAGTGCGGCAGAGCTATGGCCATACCCTTATAACCCACAATACCATGGCTTCATCTTCCATTACCAACATTACCTCTTAAATCTCCTCAGCACCATGACCATCAGCCTCAGCCTCAAACTAAACCAGTCATCACCTACAATTCACTGTCTTCTTCTTCTCACAAGCACAAGCATATGGCTCATGAGTATAATAGCTACAGCGGAGGCCGTGGAGGAGGATTCACTGCGGACTATGGCTATTATAAAGAGCCACCCTTATCAACGATTGATGAAGAAGCTGGTGCCATGTTCAGTGATGAGAACCCCCATTCCTGTGCTATTTTGTGAATCCAGGCATCATTTCTCTCTCTTGCATCGAGGACAAGGGAGTTGTAGATCAAAGGTGGAGCTCATTCATCAGACACACCACGACCAGATTGAACACCTTGAGATCAACTACTCGAACTCTTCTATACCCGCTATTGATTCACTGACCGATTCAGTAGGGAGCGAAGCCTCCTACAGTGAGAGTGGAGAGACCAACTTGGAGTTTCCTTAG

Coding sequence (CDS)

ATGGGCAAAGCAAAAGAAGATTCTGAAGGCAGTGCGGCAGAGCTATGGCCATACCCTTATAACCCACAATACCATGGCTTCATCTTCCATTACCAACATTACCTCTTAAATCTCCTCAGCACCATGACCATCAGCCTCAGCCTCAAACTAAACCAGTCATCACCTACAATTCACTGTCTTCTTCTTCTCACAAGCACAAGCATATGGCTCATGAGTATAATAGCTACAGCGGAGGCCGTGGAGGAGGATTCACTGCGGACTATGGCTATTATAAAGAGCCACCCTTATCAACGATTGATGAAGAAGCTGGTGCCATGTTCAGTGATGAGAACCCCCATTCCTGTGCTATTTTGTGAATCCAGGCATCATTTCTCTCTCTTGCATCGAGGACAAGGGAGTTGTAGATCAAAGGTGGAGCTCATTCATCAGACACACCACGACCAGATTGAACACCTTGAGATCAACTACTCGAACTCTTCTATACCCGCTATTGATTCACTGACCGATTCAGTAGGGAGCGAAGCCTCCTACAGTGAGAGTGGAGAGACCAACTTGGAGTTTCCTTAG

Protein sequence

MGKAKEDSEGSAAELWPYPYNPQYHGFIFHYQHYLLNLLSTMTISLSLKLNQSSPTIHCLLLLTSTSIWLMSIIATAEAVEEDSLRTMAIIKSHPYQRLMKKLVPCSVMRTPIPVLFCESRHHFSLLHRGQGSCRSKVELIHQTHHDQIEHLEINYSNSSIPAIDSLTDSVGSEASYSESGETNLEFP
Homology
[Close]
BLAST of Spg017912 vs. NCBI nr
Match: XP_023001505.1 (heavy metal-associated isoprenylated plant protein 28-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-05
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 0 

Query: 10 GSAAELWPYPYNPQYHGFIFHYQHYL 36
          G  AELWPYPYNPQYHGFI+HYQHYL
Sbjct: 55 GRTAELWPYPYNPQYHGFIYHYQHYL 80

[Close]
BLAST of Spg017912 vs. NCBI nr
Match: XP_023001502.1 (heavy metal-associated isoprenylated plant protein 28-like isoform X1 [Cucurbita maxima] >XP_023001503.1 heavy metal-associated isoprenylated plant protein 28-like isoform X1 [Cucurbita maxima] >XP_023001504.1 heavy metal-associated isoprenylated plant protein 28-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-05
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 0 

Query: 10 GSAAELWPYPYNPQYHGFIFHYQHYL 36
          G  AELWPYPYNPQYHGFI+HYQHYL
Sbjct: 60 GRTAELWPYPYNPQYHGFIYHYQHYL 85

[Close]
BLAST of Spg017912 vs. NCBI nr
Match: KAG7019583.1 (Heavy metal-associated isoprenylated plant protein 28, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 58.2 bits (139), Expect = 9.1e-05
Identity = 23/26 (88.46%), Postives = 23/26 (88.46%), Query Frame = 0 

Query: 10  GSAAELWPYPYNPQYHGFIFHYQHYL 36
           G  AELWPYPYNPQYHGFI HYQHYL
Sbjct: 321 GRTAELWPYPYNPQYHGFIHHYQHYL 346

[Close]
BLAST of Spg017912 vs. NCBI nr
Match: KAG6583964.1 (Heavy metal-associated isoprenylated plant protein 28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 58.2 bits (139), Expect = 9.1e-05
Identity = 23/26 (88.46%), Postives = 23/26 (88.46%), Query Frame = 0 

Query: 10  GSAAELWPYPYNPQYHGFIFHYQHYL 36
           G  AELWPYPYNPQYHGFI HYQHYL
Sbjct: 220 GRTAELWPYPYNPQYHGFIHHYQHYL 245

[Close]
BLAST of Spg017912 vs. NCBI nr
Match: XP_023519213.1 (heavy metal-associated isoprenylated plant protein 28-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 58.2 bits (139), Expect = 9.1e-05
Identity = 23/26 (88.46%), Postives = 23/26 (88.46%), Query Frame = 0 

Query: 10 GSAAELWPYPYNPQYHGFIFHYQHYL 36
          G  AELWPYPYNPQYHGFI HYQHYL
Sbjct: 69 GRTAELWPYPYNPQYHGFIHHYQHYL 94

[Close]
BLAST of Spg017912 vs. ExPASy TrEMBL
Match: A0A6J1KMX2 (heavy metal-associated isoprenylated plant protein 28-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495625 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.5e-05
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 0 

Query: 10 GSAAELWPYPYNPQYHGFIFHYQHYL 36
          G  AELWPYPYNPQYHGFI+HYQHYL
Sbjct: 60 GRTAELWPYPYNPQYHGFIYHYQHYL 85

[Close]
BLAST of Spg017912 vs. ExPASy TrEMBL
Match: A0A6J1KLD3 (heavy metal-associated isoprenylated plant protein 28-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495625 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.5e-05
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 0 

Query: 10 GSAAELWPYPYNPQYHGFIFHYQHYL 36
          G  AELWPYPYNPQYHGFI+HYQHYL
Sbjct: 55 GRTAELWPYPYNPQYHGFIYHYQHYL 80

[Close]
BLAST of Spg017912 vs. ExPASy TrEMBL
Match: A0A6J1EGT2 (heavy metal-associated isoprenylated plant protein 28-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433972 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-05
Identity = 23/26 (88.46%), Postives = 23/26 (88.46%), Query Frame = 0 

Query: 10 GSAAELWPYPYNPQYHGFIFHYQHYL 36
          G  AELWPYPYNPQYHGFI HYQHYL
Sbjct: 71 GRTAELWPYPYNPQYHGFIHHYQHYL 96

[Close]
BLAST of Spg017912 vs. ExPASy TrEMBL
Match: A0A6J1EGI2 (heavy metal-associated isoprenylated plant protein 28-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433972 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-05
Identity = 23/26 (88.46%), Postives = 23/26 (88.46%), Query Frame = 0 

Query: 10 GSAAELWPYPYNPQYHGFIFHYQHYL 36
          G  AELWPYPYNPQYHGFI HYQHYL
Sbjct: 60 GRTAELWPYPYNPQYHGFIHHYQHYL 85

[Close]
BLAST of Spg017912 vs. ExPASy TrEMBL
Match: A0A1S3B6Y2 (heavy metal-associated isoprenylated plant protein 21 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486833 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 7.5e-05
Identity = 22/26 (84.62%), Postives = 23/26 (88.46%), Query Frame = 0 

Query: 10 GSAAELWPYPYNPQYHGFIFHYQHYL 36
          G  AELWPYPYNPQYHGF+ HYQHYL
Sbjct: 66 GRTAELWPYPYNPQYHGFLHHYQHYL 91

The following BLAST results are available for this feature:
BLAST of Spg017912 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023001505.13.1e-0588.46heavy metal-associated isoprenylated plant protein 28-like isoform X2 [Cucurbita... [more]
XP_023001502.13.1e-0588.46heavy metal-associated isoprenylated plant protein 28-like isoform X1 [Cucurbita... [more]
KAG7019583.19.1e-0588.46Heavy metal-associated isoprenylated plant protein 28, partial [Cucurbita argyro... [more]
KAG6583964.19.1e-0588.46Heavy metal-associated isoprenylated plant protein 28, partial [Cucurbita argyro... [more]
XP_023519213.19.1e-0588.46heavy metal-associated isoprenylated plant protein 28-like isoform X1 [Cucurbita... [more]
BLAST of Spg017912 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg017912 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KMX21.5e-0588.46heavy metal-associated isoprenylated plant protein 28-like isoform X1 OS=Cucurbi... [more]
A0A6J1KLD31.5e-0588.46heavy metal-associated isoprenylated plant protein 28-like isoform X2 OS=Cucurbi... [more]
A0A6J1EGT24.4e-0588.46heavy metal-associated isoprenylated plant protein 28-like isoform X1 OS=Cucurbi... [more]
A0A6J1EGI24.4e-0588.46heavy metal-associated isoprenylated plant protein 28-like isoform X2 OS=Cucurbi... [more]
A0A1S3B6Y27.5e-0584.62heavy metal-associated isoprenylated plant protein 21 isoform X1 OS=Cucumis melo... [more]
BLAST of Spg017912 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg017912.1Spg017912.1mRNA