Spg017821 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg017821
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold9: 33415208 .. 33415840 (-)
RNA-Seq ExpressionSpg017821
SyntenySpg017821
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAATTCTAAAAAATGCAGTTCATGGGAATCTGTGAAATTTTCCAGGAAACCAGCAAGCTATTACACAAATGGAGAAAAATCTTCACCCAAATCACCCTTGCCTTCGTTCTTCCCCTCTCTCTCTCAATCTTCACCGACTCAGAAGTATCCAATTTCTTCCCTCAAAGAATCCACACCCAAAAATCCACAACCTACAATAATAACGTTCTTTTCAACATCGCTTCCTTCCTCTTCTCTTCCAACTTCTTTCTCCCCTGCACCCCCGCCGCCGTCTCCGCCGCCGCCTCCATCTACAAAGCACATGACGTTTCTTTCTCTTGTAGTGTTCGTATCTAGCTTCTACAGCTCAACGGTTCTTTTCGTCTTCACGATCTTTTACTTTGCGGCGGTTCTGTATTTGCTGACGATCTGGCAAATGTCGAACGTCGTGTCGGTTTTGGAAGAGTCGCGTGGGTTCAAGGCCATGGCCAGAGGGAAGGCGCTGTTGAAAGGGAAAACGGCGGTGGCCGTGATTCTTTTGCTGTCGTTGAGTTTGCCTTTCGGAGTGGTTCACTTTGTGTTTCGTCGTTTGGTTGTCCGGTGGGTGTCAAGGCGAGTGGTCGGCAGGGATATTATGGGGATTATTTGA

mRNA sequence

ATGTGGAATTCTAAAAAATGCAGTTCATGGGAATCTGTGAAATTTTCCAGGAAACCAGCAAGCTATTACACAAATGGAGAAAAATCTTCACCCAAATCACCCTTGCCTTCGTTCTTCCCCTCTCTCTCTCAATCTTCACCGACTCAGAAGTATCCAATTTCTTCCCTCAAAGAATCCACACCCAAAAATCCACAACCTACAATAATAACGTTCTTTTCAACATCGCTTCCTTCCTCTTCTCTTCCAACTTCTTTCTCCCCTGCACCCCCGCCGCCGTCTCCGCCGCCGCCTCCATCTACAAAGCACATGACGTTTCTTTCTCTTGTAGTGTTCGTATCTAGCTTCTACAGCTCAACGGTTCTTTTCGTCTTCACGATCTTTTACTTTGCGGCGGTTCTGTATTTGCTGACGATCTGGCAAATGTCGAACGTCGTGTCGGTTTTGGAAGAGTCGCGTGGGTTCAAGGCCATGGCCAGAGGGAAGGCGCTGTTGAAAGGGAAAACGGCGGTGGCCGTGATTCTTTTGCTGTCGTTGAGTTTGCCTTTCGGAGTGGTTCACTTTGTGTTTCGTCGTTTGGTTGTCCGGTGGGTGTCAAGGCGAGTGGTCGGCAGGGATATTATGGGGATTATTTGA

Coding sequence (CDS)

ATGTGGAATTCTAAAAAATGCAGTTCATGGGAATCTGTGAAATTTTCCAGGAAACCAGCAAGCTATTACACAAATGGAGAAAAATCTTCACCCAAATCACCCTTGCCTTCGTTCTTCCCCTCTCTCTCTCAATCTTCACCGACTCAGAAGTATCCAATTTCTTCCCTCAAAGAATCCACACCCAAAAATCCACAACCTACAATAATAACGTTCTTTTCAACATCGCTTCCTTCCTCTTCTCTTCCAACTTCTTTCTCCCCTGCACCCCCGCCGCCGTCTCCGCCGCCGCCTCCATCTACAAAGCACATGACGTTTCTTTCTCTTGTAGTGTTCGTATCTAGCTTCTACAGCTCAACGGTTCTTTTCGTCTTCACGATCTTTTACTTTGCGGCGGTTCTGTATTTGCTGACGATCTGGCAAATGTCGAACGTCGTGTCGGTTTTGGAAGAGTCGCGTGGGTTCAAGGCCATGGCCAGAGGGAAGGCGCTGTTGAAAGGGAAAACGGCGGTGGCCGTGATTCTTTTGCTGTCGTTGAGTTTGCCTTTCGGAGTGGTTCACTTTGTGTTTCGTCGTTTGGTTGTCCGGTGGGTGTCAAGGCGAGTGGTCGGCAGGGATATTATGGGGATTATTTGA

Protein sequence

MWNSKKCSSWESVKFSRKPASYYTNGEKSSPKSPLPSFFPSLSQSSPTQKYPISSLKESTPKNPQPTIITFFSTSLPSSSLPTSFSPAPPPPSPPPPPSTKHMTFLSLVVFVSSFYSSTVLFVFTIFYFAAVLYLLTIWQMSNVVSVLEESRGFKAMARGKALLKGKTAVAVILLLSLSLPFGVVHFVFRRLVVRWVSRRVVGRDIMGII
Homology
BLAST of Spg017821 vs. NCBI nr
Match: XP_023523493.1 (uncharacterized protein LOC111787693 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-15
Identity = 53/111 (47.75%), Postives = 76/111 (68.47%), Query Frame = 0

Query: 103 MTFLSLVVFVSSFYSSTV---LFVFTIFYFAAVLYLLTIWQMSNVVSVLEESRGFKAMAR 162
           ++ L L++F+     S V   ++ F I Y A   YL+TIWQ+SNVVSVLE+S GFKAMA+
Sbjct: 116 ISLLVLIIFIGHITGSGVILLIYAFQILYLAGAFYLMTIWQLSNVVSVLEDSYGFKAMAK 175

Query: 163 GKALLKGKTAVAVILLLSLSLPFGVVHFVFRRLVVRWVSRRVVGRDIMGII 211
             AL+KGK  ++V+++L LSLP G V F+F  LVVR  +  VV + ++GI+
Sbjct: 176 SYALVKGKLGISVVIILLLSLPLGTVRFMFGHLVVRAAALGVVSKGVLGIL 226

BLAST of Spg017821 vs. NCBI nr
Match: XP_022926260.1 (uncharacterized protein LOC111433439 [Cucurbita moschata])

HSP 1 Score: 92.8 bits (229), Expect = 3.7e-15
Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 0

Query: 103 MTFLSLVVFVSSFYSSTV---LFVFTIFYFAAVLYLLTIWQMSNVVSVLEESRGFKAMAR 162
           ++ L L++F+    +S V   ++ F I Y     YL+TIWQ+SNVVSVLE+S GFKAMA+
Sbjct: 74  ISLLVLIIFIGHITASGVILLIYAFQILYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAK 133

Query: 163 GKALLKGKTAVAVILLLSLSLPFGVVHFVFRRLVVRWVSRRVVGRDIMGII 211
             AL+KGK  ++V+++L LSLP G V F+F  LVVR  +  VV + ++GI+
Sbjct: 134 SYALVKGKLGISVVIILLLSLPLGTVRFMFGHLVVRAAALGVVSKGVLGIL 184

BLAST of Spg017821 vs. NCBI nr
Match: KAG6592156.1 (hypothetical protein SDJN03_14502, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-14
Identity = 54/91 (59.34%), Postives = 63/91 (69.23%), Query Frame = 0

Query: 119 TVLFVFTIFYFAAVLYLLTIWQMSNVVSVLEESRGFKAMARGKALLKGKTAVAVILLLSL 178
           T+ F FTIFY AA+ YL  IWQ+S+VVSVLE S GFKAMA+ K LLKGK  + V L + L
Sbjct: 139 TIFFFFTIFYLAAIWYLTIIWQLSSVVSVLEASCGFKAMAKSKGLLKGKMKMVVKLTMLL 198

Query: 179 SLPFGVVHFVFRRLVVRWVSRRVVGRDIMGI 210
           +LP GV   VF  LVVR  S  V GR I+GI
Sbjct: 199 NLPLGVAQLVFYYLVVRSASVGVAGRGILGI 229

BLAST of Spg017821 vs. NCBI nr
Match: XP_022981540.1 (uncharacterized protein LOC111480627 isoform X2 [Cucurbita maxima])

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-14
Identity = 51/111 (45.95%), Postives = 75/111 (67.57%), Query Frame = 0

Query: 103 MTFLSLVVFVSSFYSSTVL---FVFTIFYFAAVLYLLTIWQMSNVVSVLEESRGFKAMAR 162
           ++ L L++F+     S V+   + F I Y A   YL+TIWQ+SNVVSVLE+S GFKAMA+
Sbjct: 74  ISLLFLIIFIGHITGSGVILLVYAFQILYLAGAFYLMTIWQLSNVVSVLEDSYGFKAMAK 133

Query: 163 GKALLKGKTAVAVILLLSLSLPFGVVHFVFRRLVVRWVSRRVVGRDIMGII 211
             AL+KGK  ++V+++L LSLP G V F+F  LVV   +  V+ + ++GI+
Sbjct: 134 SHALVKGKLGLSVVIILLLSLPLGTVRFMFGHLVVHAAALGVLSKGVLGIL 184

BLAST of Spg017821 vs. NCBI nr
Match: KAG6607694.1 (hypothetical protein SDJN03_01036, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-14
Identity = 50/111 (45.05%), Postives = 75/111 (67.57%), Query Frame = 0

Query: 103 MTFLSLVVFVSSFYSSTV---LFVFTIFYFAAVLYLLTIWQMSNVVSVLEESRGFKAMAR 162
           ++ L L++F+     S V   ++ F I Y     YL+TIWQ+SNVVSVLE+S GFKAMA+
Sbjct: 165 ISLLVLIIFIGHITGSGVILLIYAFQILYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAK 224

Query: 163 GKALLKGKTAVAVILLLSLSLPFGVVHFVFRRLVVRWVSRRVVGRDIMGII 211
             AL++GK  ++V+++L +SLP G V F+F  LVVR  +  VV + ++GI+
Sbjct: 225 SHALVRGKLGISVVIILLVSLPLGTVRFMFGHLVVRAAALGVVSKGVLGIL 275

BLAST of Spg017821 vs. ExPASy TrEMBL
Match: A0A6J1EKL5 (uncharacterized protein LOC111433439 OS=Cucurbita moschata OX=3662 GN=LOC111433439 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.8e-15
Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 0

Query: 103 MTFLSLVVFVSSFYSSTV---LFVFTIFYFAAVLYLLTIWQMSNVVSVLEESRGFKAMAR 162
           ++ L L++F+    +S V   ++ F I Y     YL+TIWQ+SNVVSVLE+S GFKAMA+
Sbjct: 74  ISLLVLIIFIGHITASGVILLIYAFQILYLGGAFYLMTIWQLSNVVSVLEDSYGFKAMAK 133

Query: 163 GKALLKGKTAVAVILLLSLSLPFGVVHFVFRRLVVRWVSRRVVGRDIMGII 211
             AL+KGK  ++V+++L LSLP G V F+F  LVVR  +  VV + ++GI+
Sbjct: 134 SYALVKGKLGISVVIILLLSLPLGTVRFMFGHLVVRAAALGVVSKGVLGIL 184

BLAST of Spg017821 vs. ExPASy TrEMBL
Match: A0A6J1IZS7 (uncharacterized protein LOC111480627 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480627 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 9.0e-15
Identity = 51/111 (45.95%), Postives = 75/111 (67.57%), Query Frame = 0

Query: 103 MTFLSLVVFVSSFYSSTVL---FVFTIFYFAAVLYLLTIWQMSNVVSVLEESRGFKAMAR 162
           ++ L L++F+     S V+   + F I Y A   YL+TIWQ+SNVVSVLE+S GFKAMA+
Sbjct: 74  ISLLFLIIFIGHITGSGVILLVYAFQILYLAGAFYLMTIWQLSNVVSVLEDSYGFKAMAK 133

Query: 163 GKALLKGKTAVAVILLLSLSLPFGVVHFVFRRLVVRWVSRRVVGRDIMGII 211
             AL+KGK  ++V+++L LSLP G V F+F  LVV   +  V+ + ++GI+
Sbjct: 134 SHALVKGKLGLSVVIILLLSLPLGTVRFMFGHLVVHAAALGVLSKGVLGIL 184

BLAST of Spg017821 vs. ExPASy TrEMBL
Match: A0A6J1J254 (uncharacterized protein LOC111480627 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480627 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 9.0e-15
Identity = 51/111 (45.95%), Postives = 75/111 (67.57%), Query Frame = 0

Query: 103 MTFLSLVVFVSSFYSSTVL---FVFTIFYFAAVLYLLTIWQMSNVVSVLEESRGFKAMAR 162
           ++ L L++F+     S V+   + F I Y A   YL+TIWQ+SNVVSVLE+S GFKAMA+
Sbjct: 165 ISLLFLIIFIGHITGSGVILLVYAFQILYLAGAFYLMTIWQLSNVVSVLEDSYGFKAMAK 224

Query: 163 GKALLKGKTAVAVILLLSLSLPFGVVHFVFRRLVVRWVSRRVVGRDIMGII 211
             AL+KGK  ++V+++L LSLP G V F+F  LVV   +  V+ + ++GI+
Sbjct: 225 SHALVKGKLGLSVVIILLLSLPLGTVRFMFGHLVVHAAALGVLSKGVLGIL 275

BLAST of Spg017821 vs. ExPASy TrEMBL
Match: A0A6J1FCY9 (uncharacterized protein LOC111442875 OS=Cucurbita moschata OX=3662 GN=LOC111442875 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 7.6e-14
Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 0

Query: 119 TVLFVFTIFYFAAVLYLLTIWQMSNVVSVLEESRGFKAMARGKALLKGKTAVAVILLLSL 178
           T+ F FTIFY AA+ YL  IWQ+S+VVSVLE S GFKAMA+ K LLKGK  + V L + L
Sbjct: 124 TIFFFFTIFYLAAIWYLTIIWQLSSVVSVLEASCGFKAMAKSKGLLKGKMKMVVKLTMLL 183

Query: 179 SLPFGVVHFVFRRLVVRWVSRRVVGRDIMGI 210
           +LP GV   VF  LVVR  S  V  R I+GI
Sbjct: 184 NLPLGVAQLVFYYLVVRSASVGVAVRGILGI 214

BLAST of Spg017821 vs. ExPASy TrEMBL
Match: A0A5D3DMI0 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00460 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.9e-12
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 0

Query: 121 LFVFTIFYFAAVLYLLTIWQMSNVVSVLEESRGFKAMARGKALLKGKTAVAVILLLSLSL 180
           L+V  I Y A   YL  IWQ+SNV+SVLE+S GFKAM +   L+KGK  ++V+++L LSL
Sbjct: 186 LYVVQILYLAGAFYLTAIWQLSNVISVLEDSYGFKAMGKSYGLVKGKLGISVVIILCLSL 245

Query: 181 PFGVVHFVFRRLVVRWVSRRVVGRDIMGI 210
           P G   FVF  LVVR  S  ++ +  +GI
Sbjct: 246 PLGTARFVFGHLVVRTASLGILSKGTLGI 274

BLAST of Spg017821 vs. TAIR 10
Match: AT1G31130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.4e-04
Identity = 29/94 (30.85%), Postives = 50/94 (53.19%), Query Frame = 0

Query: 123 VFTIFYFAAVLYLLTIWQMSNVVSVLEESRGFKAMARGKALLKGKTAVAVILLLSLSLPF 182
           + ++ YF   +Y   +W + +V+SVLE   G  AM +   LLKGKT +A+ L+       
Sbjct: 172 IISVLYFGVHVYFTALWHLGSVISVLEPVYGIAAMRKAYELLKGKTKMAMGLIFVYLFLC 231

Query: 183 GVVHFVFRRLVVR------WVSRRVVGRDIMGII 211
           G++  VF  +VV         +R +VG  ++G++
Sbjct: 232 GLIGVVFGAVVVHGGGKYGTFTRTLVGGLLVGVL 265

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023523493.11.7e-1547.75uncharacterized protein LOC111787693 [Cucurbita pepo subsp. pepo][more]
XP_022926260.13.7e-1546.85uncharacterized protein LOC111433439 [Cucurbita moschata][more]
KAG6592156.11.4e-1459.34hypothetical protein SDJN03_14502, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022981540.11.9e-1445.95uncharacterized protein LOC111480627 isoform X2 [Cucurbita maxima][more]
KAG6607694.11.9e-1445.05hypothetical protein SDJN03_01036, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1EKL51.8e-1546.85uncharacterized protein LOC111433439 OS=Cucurbita moschata OX=3662 GN=LOC1114334... [more]
A0A6J1IZS79.0e-1545.95uncharacterized protein LOC111480627 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1J2549.0e-1545.95uncharacterized protein LOC111480627 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FCY97.6e-1458.24uncharacterized protein LOC111442875 OS=Cucurbita moschata OX=3662 GN=LOC1114428... [more]
A0A5D3DMI01.9e-1249.44Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
Match NameE-valueIdentityDescription
AT1G31130.12.4e-0430.85unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..64
NoneNo IPR availablePANTHERPTHR33133:SF51PROTEIN, PUTATIVE-RELATEDcoord: 108..209
NoneNo IPR availablePANTHERPTHR33133OS08G0107100 PROTEIN-RELATEDcoord: 108..209

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg017821.1Spg017821.1mRNA