Spg017821 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAATTCTAAAAAATGCAGTTCATGGGAATCTGTGAAATTTTCCAGGAAACCAGCAAGCTATTACACAAATGGAGAAAAATCTTCACCCAAATCACCCTTGCCTTCGTTCTTCCCCTCTCTCTCTCAATCTTCACCGACTCAGAAGTATCCAATTTCTTCCCTCAAAGAATCCACACCCAAAAATCCACAACCTACAATAATAACGTTCTTTTCAACATCGCTTCCTTCCTCTTCTCTTCCAACTTCTTTCTCCCCTGCACCCCCGCCGCCGTCTCCGCCGCCGCCTCCATCTACAAAGCACATGACGTTTCTTTCTCTTGTAGTGTTCGTATCTAGCTTCTACAGCTCAACGGTTCTTTTCGTCTTCACGATCTTTTACTTTGCGGCGGTTCTGTATTTGCTGACGATCTGGCAAATGTCGAACGTCGTGTCGGTTTTGGAAGAGTCGCGTGGGTTCAAGGCCATGGCCAGAGGGAAGGCGCTGTTGAAAGGGAAAACGGCGGTGGCCGTGATTCTTTTGCTGTCGTTGAGTTTGCCTTTCGGAGTGGTTCACTTTGTGTTTCGTCGTTTGGTTGTCCGGTGGGTGTCAAGGCGAGTGGTCGGCAGGGATATTATGGGGATTATTTGA ATGTGGAATTCTAAAAAATGCAGTTCATGGGAATCTGTGAAATTTTCCAGGAAACCAGCAAGCTATTACACAAATGGAGAAAAATCTTCACCCAAATCACCCTTGCCTTCGTTCTTCCCCTCTCTCTCTCAATCTTCACCGACTCAGAAGTATCCAATTTCTTCCCTCAAAGAATCCACACCCAAAAATCCACAACCTACAATAATAACGTTCTTTTCAACATCGCTTCCTTCCTCTTCTCTTCCAACTTCTTTCTCCCCTGCACCCCCGCCGCCGTCTCCGCCGCCGCCTCCATCTACAAAGCACATGACGTTTCTTTCTCTTGTAGTGTTCGTATCTAGCTTCTACAGCTCAACGGTTCTTTTCGTCTTCACGATCTTTTACTTTGCGGCGGTTCTGTATTTGCTGACGATCTGGCAAATGTCGAACGTCGTGTCGGTTTTGGAAGAGTCGCGTGGGTTCAAGGCCATGGCCAGAGGGAAGGCGCTGTTGAAAGGGAAAACGGCGGTGGCCGTGATTCTTTTGCTGTCGTTGAGTTTGCCTTTCGGAGTGGTTCACTTTGTGTTTCGTCGTTTGGTTGTCCGGTGGGTGTCAAGGCGAGTGGTCGGCAGGGATATTATGGGGATTATTTGA ATGTGGAATTCTAAAAAATGCAGTTCATGGGAATCTGTGAAATTTTCCAGGAAACCAGCAAGCTATTACACAAATGGAGAAAAATCTTCACCCAAATCACCCTTGCCTTCGTTCTTCCCCTCTCTCTCTCAATCTTCACCGACTCAGAAGTATCCAATTTCTTCCCTCAAAGAATCCACACCCAAAAATCCACAACCTACAATAATAACGTTCTTTTCAACATCGCTTCCTTCCTCTTCTCTTCCAACTTCTTTCTCCCCTGCACCCCCGCCGCCGTCTCCGCCGCCGCCTCCATCTACAAAGCACATGACGTTTCTTTCTCTTGTAGTGTTCGTATCTAGCTTCTACAGCTCAACGGTTCTTTTCGTCTTCACGATCTTTTACTTTGCGGCGGTTCTGTATTTGCTGACGATCTGGCAAATGTCGAACGTCGTGTCGGTTTTGGAAGAGTCGCGTGGGTTCAAGGCCATGGCCAGAGGGAAGGCGCTGTTGAAAGGGAAAACGGCGGTGGCCGTGATTCTTTTGCTGTCGTTGAGTTTGCCTTTCGGAGTGGTTCACTTTGTGTTTCGTCGTTTGGTTGTCCGGTGGGTGTCAAGGCGAGTGGTCGGCAGGGATATTATGGGGATTATTTGA MWNSKKCSSWESVKFSRKPASYYTNGEKSSPKSPLPSFFPSLSQSSPTQKYPISSLKESTPKNPQPTIITFFSTSLPSSSLPTSFSPAPPPPSPPPPPSTKHMTFLSLVVFVSSFYSSTVLFVFTIFYFAAVLYLLTIWQMSNVVSVLEESRGFKAMARGKALLKGKTAVAVILLLSLSLPFGVVHFVFRRLVVRWVSRRVVGRDIMGII Homology
BLAST of Spg017821 vs. NCBI nr
Match: XP_023523493.1 (uncharacterized protein LOC111787693 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 94.0 bits (232), Expect = 1.7e-15 Identity = 53/111 (47.75%), Postives = 76/111 (68.47%), Query Frame = 0
BLAST of Spg017821 vs. NCBI nr
Match: XP_022926260.1 (uncharacterized protein LOC111433439 [Cucurbita moschata]) HSP 1 Score: 92.8 bits (229), Expect = 3.7e-15 Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 0
BLAST of Spg017821 vs. NCBI nr
Match: KAG6592156.1 (hypothetical protein SDJN03_14502, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-14 Identity = 54/91 (59.34%), Postives = 63/91 (69.23%), Query Frame = 0
BLAST of Spg017821 vs. NCBI nr
Match: XP_022981540.1 (uncharacterized protein LOC111480627 isoform X2 [Cucurbita maxima]) HSP 1 Score: 90.5 bits (223), Expect = 1.9e-14 Identity = 51/111 (45.95%), Postives = 75/111 (67.57%), Query Frame = 0
BLAST of Spg017821 vs. NCBI nr
Match: KAG6607694.1 (hypothetical protein SDJN03_01036, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 90.5 bits (223), Expect = 1.9e-14 Identity = 50/111 (45.05%), Postives = 75/111 (67.57%), Query Frame = 0
BLAST of Spg017821 vs. ExPASy TrEMBL
Match: A0A6J1EKL5 (uncharacterized protein LOC111433439 OS=Cucurbita moschata OX=3662 GN=LOC111433439 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.8e-15 Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 0
BLAST of Spg017821 vs. ExPASy TrEMBL
Match: A0A6J1IZS7 (uncharacterized protein LOC111480627 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480627 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 9.0e-15 Identity = 51/111 (45.95%), Postives = 75/111 (67.57%), Query Frame = 0
BLAST of Spg017821 vs. ExPASy TrEMBL
Match: A0A6J1J254 (uncharacterized protein LOC111480627 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480627 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 9.0e-15 Identity = 51/111 (45.95%), Postives = 75/111 (67.57%), Query Frame = 0
BLAST of Spg017821 vs. ExPASy TrEMBL
Match: A0A6J1FCY9 (uncharacterized protein LOC111442875 OS=Cucurbita moschata OX=3662 GN=LOC111442875 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 7.6e-14 Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 0
BLAST of Spg017821 vs. ExPASy TrEMBL
Match: A0A5D3DMI0 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00460 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.9e-12 Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 0
BLAST of Spg017821 vs. TAIR 10
Match: AT1G31130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 2.4e-04 Identity = 29/94 (30.85%), Postives = 50/94 (53.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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